BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00013864
         (698 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Popu...   115   1e-23
ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-li...   102   2e-19
ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-li...   102   2e-19
ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phas...   101   2e-19
ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-li...   100   4e-19
ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prun...   100   8e-19
ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citr...    95   2e-17
ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-li...    95   2e-17
ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-li...    95   3e-17
gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]        94   4e-17
tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea m...    94   4e-17
ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-li...    92   2e-16
ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma ca...    91   3e-16
ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis ...    89   2e-15
ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-li...    88   2e-15
ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-li...    87   7e-15
ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Caps...    84   6e-14
ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana] gi...    84   6e-14
ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-li...    75   2e-11
ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-li...    75   2e-11

>ref|XP_002298160.2| hypothetical protein POPTR_0001s22140g [Populus trichocarpa]
           gi|550347876|gb|EEE82965.2| hypothetical protein
           POPTR_0001s22140g [Populus trichocarpa]
          Length = 981

 Score =  115 bits (289), Expect = 1e-23
 Identities = 83/225 (36%), Positives = 98/225 (43%), Gaps = 4/225 (1%)
 Frame = +3

Query: 36  DIRKWFMKAHTK---NDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSR 206
           DIRKWFMKAH K   N ATN                   P+TE    GGQE SGR+KTS+
Sbjct: 4   DIRKWFMKAHDKGNDNAATNAEKKPPPTE----------PKTETPVCGGQEGSGRRKTSK 53

Query: 207 YFATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVK 386
           YFA    K K+++E E   AKRK Q       + +KPPP KK+HK   E++      P K
Sbjct: 54  YFAANKQKQKEDKEIEDLPAKRKAQNDGV---QSVKPPPSKKVHKVDDEEEDDDFSLPKK 110

Query: 387 KLLKAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSV-XXXXXXXXVGGTPRKPXXXX 563
           K                   SP+KKLKS+      +K V         V  T        
Sbjct: 111 K----------------NDASPSKKLKSSSGRGIAQKPVHVNESDEDDVKDTESPLKSGG 154

Query: 564 XXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                   FMNFGE+KDPPHKGEKEVPEG
Sbjct: 155 RGRGGRGVSGAPSGGRGRGGGRGGFMNFGEKKDPPHKGEKEVPEG 199


>ref|XP_006592364.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Glycine
           max]
          Length = 947

 Score =  102 bits (253), Expect = 2e-19
 Identities = 78/225 (34%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTK-NDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSR 206
           M DIRKWFMK H K N+A +                   PQ+EK+  GGQESSGR+ TS+
Sbjct: 1   MSDIRKWFMKTHDKGNNAASSKPSNQPKPSSDK------PQSEKTVAGGQESSGRRITSK 54

Query: 207 YFATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVK 386
           YF +   K KD++E ++  AKRK  + S+ +      P  KK+H  + + D    PT  K
Sbjct: 55  YFNSNKQKGKDKKEMQELPAKRKNMKDSEEI------PEPKKIH--EDDGDDSVLPTNKK 106

Query: 387 KLLKAKXXXXXXXXXXXXXPSPAKKLKS-TPRNKGVKKSVXXXXXXXXVGGTPRKPXXXX 563
           KL                  +P KKLKS + R    K +V                    
Sbjct: 107 KLADT---------------TPTKKLKSGSGRGLPQKSAVLEESDEDDDKDAVSAAKSAG 151

Query: 564 XXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                   FMNFGERKDPPHKGEKEVPEG
Sbjct: 152 RGDGGRGAPGRSTSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 196


>ref|XP_006592363.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Glycine
           max]
          Length = 949

 Score =  102 bits (253), Expect = 2e-19
 Identities = 78/225 (34%), Positives = 98/225 (43%), Gaps = 2/225 (0%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTK-NDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSR 206
           M DIRKWFMK H K N+A +                   PQ+EK+  GGQESSGR+ TS+
Sbjct: 1   MSDIRKWFMKTHDKGNNAASSKPSNQPKPSSDK------PQSEKTVAGGQESSGRRITSK 54

Query: 207 YFATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVK 386
           YF +   K KD++E ++  AKRK  + S+ +      P  KK+H  + + D    PT  K
Sbjct: 55  YFNSNKQKGKDKKEMQELPAKRKNMKDSEEI------PEPKKIH--EDDGDDSVLPTNKK 106

Query: 387 KLLKAKXXXXXXXXXXXXXPSPAKKLKS-TPRNKGVKKSVXXXXXXXXVGGTPRKPXXXX 563
           KL                  +P KKLKS + R    K +V                    
Sbjct: 107 KLADT---------------TPTKKLKSGSGRGLPQKSAVLEESDEDDDKDAVSAAKSAG 151

Query: 564 XXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                   FMNFGERKDPPHKGEKEVPEG
Sbjct: 152 RGDGGRGAPGRSTSGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 196


>ref|XP_007132512.1| hypothetical protein PHAVU_011G100500g [Phaseolus vulgaris]
           gi|561005512|gb|ESW04506.1| hypothetical protein
           PHAVU_011G100500g [Phaseolus vulgaris]
          Length = 938

 Score =  101 bits (252), Expect = 2e-19
 Identities = 81/223 (36%), Positives = 96/223 (43%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMK+H K +                      PQ EK+  GGQESSGR+ TS+Y
Sbjct: 1   MSDIRKWFMKSHDKGNNAAPSKPSNQPKPSSDK-----PQPEKNVAGGQESSGRRVTSKY 55

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKK 389
           F T   K K+E+E ++  AKRK  + S    ED   P  K++H  +   D    PT  KK
Sbjct: 56  FNTNKQKVKEEKETQELPAKRKNVKDS----EDTPEP--KRVH--EDVGDDSVLPTNKKK 107

Query: 390 LLKAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSVXXXXXXXXVGGTPRKPXXXXXX 569
           L +A               +P KKLKS       KKSV              K       
Sbjct: 108 LAEA---------------TPTKKLKSGSGRGIPKKSVVLEESDE----DDDKGAVSAVK 148

Query: 570 XXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                 FMNFGERKDPPHKGEKEVPEG
Sbjct: 149 SAGRGGGGRGAPGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 191


>ref|XP_006582373.1| PREDICTED: replication factor C subunit 1-like [Glycine max]
          Length = 938

 Score =  100 bits (250), Expect = 4e-19
 Identities = 78/229 (34%), Positives = 95/229 (41%), Gaps = 6/229 (2%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTK-NDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSR 206
           M DIRKWFMK H K N+A +                   PQ+EK+  GGQESSGR+ TS+
Sbjct: 1   MSDIRKWFMKTHDKGNNAASSKPSSDK------------PQSEKTVAGGQESSGRRITSK 48

Query: 207 YFATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVK 386
           YF +   K KDE+E ++  AKRK  + S+ + ED              + D    PT  K
Sbjct: 49  YFNSNKQKGKDEKEKQELPAKRKNAKDSEEIHED--------------DGDDSVLPTNKK 94

Query: 387 KLLKAKXXXXXXXXXXXXXPSPAKKLKS-----TPRNKGVKKSVXXXXXXXXVGGTPRKP 551
           KL                  +P KKLKS      P+   V +          V     K 
Sbjct: 95  KLADT---------------TPTKKLKSGSGRGIPKKSAVLEESDEDDDKDAVSAA--KS 137

Query: 552 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                       FMNFGERKDPPHKGEKEVPEG
Sbjct: 138 AGRGGGGGGRGAPGRSTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 186


>ref|XP_007199003.1| hypothetical protein PRUPE_ppa000922mg [Prunus persica]
           gi|462394403|gb|EMJ00202.1| hypothetical protein
           PRUPE_ppa000922mg [Prunus persica]
          Length = 961

 Score = 99.8 bits (247), Expect = 8e-19
 Identities = 80/232 (34%), Positives = 98/232 (42%), Gaps = 11/232 (4%)
 Frame = +3

Query: 36  DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRYFA 215
           DIRKWFMK+H K +                       QT  + +GGQE+ GR+KTS+YF 
Sbjct: 4   DIRKWFMKSHDKGNGKKPAPTTS--------------QTPSTVHGGQENPGRRKTSKYFT 49

Query: 216 TKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKKLL 395
           T  DK K E+E E   AKRK   + K  DE +KP P KK+HK   + D    P   K  +
Sbjct: 50  T--DKPKAEKETE-VPAKRK---THKEPDESVKPSPAKKVHKVVDDDDDFVLPHSKKNSV 103

Query: 396 KAKXXXXXXXXXXXXXPSPAKKLKS----------TPRNKGVKKSVXXXXXXXXVGGTPR 545
            A               +P+KKLKS          T  ++G    V         GG  R
Sbjct: 104 DA---------------TPSKKLKSASGVGVPQKLTAIDEGGDNDVKDAESPHKPGGKGR 148

Query: 546 -KPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                          FMNFG+RKDPPHKGEKEVPEG
Sbjct: 149 GGRGTSAGPAGGRGTSAGPAGGRGRGAGRGGFMNFGDRKDPPHKGEKEVPEG 200


>ref|XP_006424055.1| hypothetical protein CICLE_v10027762mg [Citrus clementina]
           gi|557525989|gb|ESR37295.1| hypothetical protein
           CICLE_v10027762mg [Citrus clementina]
          Length = 958

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 74/222 (33%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
 Frame = +3

Query: 36  DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRYFA 215
           DIRKWF+K H+K D  N                 +     +   GG ES GR+KTS+YFA
Sbjct: 4   DIRKWFLKPHSK-DKDNATIPANTALSN------LETTNSEPGCGGHESMGRRKTSKYFA 56

Query: 216 TKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKKLL 395
           T   K +D  E E+  AKRK ++      + ++  P+KK HKA  + D    P+  K  +
Sbjct: 57  TDKQKPEDGGEKEELPAKRKAEKDD---GKSVRSSPLKKFHKADDDDDDFVPPSVKKNSV 113

Query: 396 KAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSV-XXXXXXXXVGGTPRKPXXXXXXX 572
            A               +P+KKLKS       +KSV         V  T           
Sbjct: 114 GA---------------TPSKKLKSGSGRAVAQKSVDIDDDEEEDVKKTESPLKSSGRGR 158

Query: 573 XXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                FMNFGERKDPPHKGEKEVPEG
Sbjct: 159 GGRGASGAPAVGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 200


>ref|XP_004156105.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 942

 Score = 95.1 bits (235), Expect = 2e-17
 Identities = 74/225 (32%), Positives = 96/225 (42%), Gaps = 2/225 (0%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           MGDIRKWFMKAH K++ +                        K+   G ES+GR+ TS+Y
Sbjct: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSA-----SAGKTGPSGGESAGRQITSKY 55

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKK 389
           FA++  ++KD +E E++ AKRK Q   K  +E  K  P+KK +K     D     +  K 
Sbjct: 56  FASEKQEAKDAEETEESPAKRKFQ---KYNEESPKASPLKKSNKVDDNDDDAVLSSSKKN 112

Query: 390 LLKAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGV--KKSVXXXXXXXXVGGTPRKPXXXX 563
           + +                +P KKLKS    KG+  K             GT        
Sbjct: 113 MSEV---------------TPNKKLKS-GSGKGITQKPVEIEASDDEETKGTDSSLKPSG 156

Query: 564 XXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                   FMNFGERKDPPHKGEKEVPEG
Sbjct: 157 RGRGGKGSSAATIGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 201


>ref|XP_006487829.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Citrus
           sinensis] gi|568869228|ref|XP_006487830.1| PREDICTED:
           replication factor C subunit 1-like isoform X2 [Citrus
           sinensis]
          Length = 958

 Score = 94.7 bits (234), Expect = 3e-17
 Identities = 74/222 (33%), Positives = 94/222 (42%), Gaps = 1/222 (0%)
 Frame = +3

Query: 36  DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRYFA 215
           DIRKWF+K H+K D  N                 +     +   GG ES GR+KTS+YFA
Sbjct: 4   DIRKWFLKPHSK-DKDNATIPANTALSN------LETTNSEPGCGGHESMGRRKTSKYFA 56

Query: 216 TKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKKLL 395
           T   K +D  E E+  AKRK ++      + ++  P+KK HKA  + D    P+  K  +
Sbjct: 57  TDKQKPEDGGEKEELPAKRKAKKDD---GKSVRSSPLKKFHKADDDDDDFVPPSVKKNSV 113

Query: 396 KAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSV-XXXXXXXXVGGTPRKPXXXXXXX 572
            A               +P+KKLKS       +KSV         V  T           
Sbjct: 114 GA---------------TPSKKLKSGSGRAVAQKSVDIDDDEEEDVKKTESPLKSSGRGR 158

Query: 573 XXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                FMNFGERKDPPHKGEKEVPEG
Sbjct: 159 GGRGASGAPAVGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 200


>gb|EXB57307.1| Replication factor C subunit 1 [Morus notabilis]
          Length = 1047

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 78/230 (33%), Positives = 97/230 (42%), Gaps = 9/230 (3%)
 Frame = +3

Query: 36  DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRYFA 215
           DIRKWFMK+H K +  +                      E+   G Q++SGR+KTS+YF+
Sbjct: 89  DIRKWFMKSHEKGNGNSASKPAKSAQALP----------EEPVQGSQDNSGRRKTSKYFS 138

Query: 216 TKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD---GGSKPTPVK 386
             A+K KDE+E  +   KRK Q  S    E +KP P KK+HK   + D     +K  PV 
Sbjct: 139 --AEKPKDEKEMVEVPVKRKTQTDS---HEMVKPSPAKKIHKVDDDDDFVLPNTKEKPVA 193

Query: 387 KLLKAKXXXXXXXXXXXXXPSPAKKLKS-TPRNKGVK-----KSVXXXXXXXXVGGTPRK 548
                               +P KKLKS + R  G K     +S            TP K
Sbjct: 194 S-------------------TPRKKLKSGSGRGTGQKPLDIDESDDGDDDEVKHVETPSK 234

Query: 549 PXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                        FMNFGERKDPPHKGEKEVPEG
Sbjct: 235 -SGGRGRGGGRGASVAPSGGRGRGAGRGGFMNFGERKDPPHKGEKEVPEG 283


>tpg|DAA42160.1| TPA: hypothetical protein ZEAMMB73_255627 [Zea mays]
          Length = 985

 Score = 94.0 bits (232), Expect = 4e-17
 Identities = 75/237 (31%), Positives = 97/237 (40%), Gaps = 16/237 (6%)
 Frame = +3

Query: 36  DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKS----TNGGQESSGRKKTS 203
           DIRKWFMK   K+ A +                  IP+ + +     +   ++S R+KTS
Sbjct: 4   DIRKWFMKPQDKSAAASGAAGKPSGSAAEKKPVLSIPEKKSAPPALASCDHDTSARRKTS 63

Query: 204 RYFATKADKSKDEQEAE----KTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD---G 362
           +YF +KA+K  D Q A+    K+ AKRK Q+ +  + ED KP P KK+   +++ D    
Sbjct: 64  KYFGSKAEKDSDVQMADASGGKSAAKRKLQKCNDEVKEDSKPFPAKKMFDDEEDDDFVAP 123

Query: 363 GSKPTPVKKLLKAKXXXXXXXXXXXXXPSPAKKLK-----STPRNKGVKKSVXXXXXXXX 527
             K TPVK                   P P+KKLK       P                 
Sbjct: 124 AKKKTPVK-------------------PPPSKKLKVESNVEAPAKTTGVDDAEDEDRMDE 164

Query: 528 VGGTPRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
              TP K                             FMNFGERKDPPHKGEKEVPEG
Sbjct: 165 DAKTPSK-GAGRGRGRGGRGGAGAAPGGRGRGGGRGFMNFGERKDPPHKGEKEVPEG 220


>ref|XP_004979519.1| PREDICTED: replication factor C subunit 1-like [Setaria italica]
          Length = 989

 Score = 92.0 bits (227), Expect = 2e-16
 Identities = 72/234 (30%), Positives = 92/234 (39%), Gaps = 13/234 (5%)
 Frame = +3

Query: 36  DIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKS----TNGGQESSGRKKTS 203
           DIRKWFMK   K  A+                   IP+ +++     +   + S R+KTS
Sbjct: 4   DIRKWFMKTQDKGGASGAVKPSGPAAAEKKKPVLSIPEKKQAPPSLASCDHDPSARRKTS 63

Query: 204 RYFATKADKSKDEQEA--------EKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD 359
           +YF +K +K  D + A        EK  AKRK Q+ S  L +D KP P KK+ K   E D
Sbjct: 64  KYFGSKTEKDSDVEMADATAGKSTEKNAAKRKLQKGSNELKDDTKPLPAKKMSK-DDEDD 122

Query: 360 GGSKPTPVKKLLKAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSVXXXXXXXXVGGT 539
                +P KK    K             PS   K++S     G             +   
Sbjct: 123 NDDFVSPSKKKTPVK-----------PPPSKKPKVESNVEAPGRTTGTDDGEEEDKMDED 171

Query: 540 PRKP-XXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
            + P                             FMNFGERKDPPHKGEKEVPEG
Sbjct: 172 AKTPSKGAGRGRGRGGRGGAAPGGRGRGGGGRGFMNFGERKDPPHKGEKEVPEG 225


>ref|XP_007010535.1| Replication factor C subunit 1 [Theobroma cacao]
           gi|508727448|gb|EOY19345.1| Replication factor C subunit
           1 [Theobroma cacao]
          Length = 1012

 Score = 91.3 bits (225), Expect = 3e-16
 Identities = 72/232 (31%), Positives = 89/232 (38%), Gaps = 9/232 (3%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMKAH K                        P    S  GG+E+SGR+KTS+Y
Sbjct: 1   MSDIRKWFMKAHDKGKGNASKPANPA------------PTNTDSVPGGRENSGRRKTSKY 48

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKA---------KKEKDG 362
           F     + K EQ  E+  AKRK Q  +++++   KPPP KK  K          K     
Sbjct: 49  FPAGKQQPKGEQGTEELPAKRKVQNENESVE---KPPPSKKPSKVGIDDDFVLPKSRNTV 105

Query: 363 GSKPTPVKKLLKAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSVXXXXXXXXVGGTP 542
              P+  +K    +                AK L+S  ++ G               G  
Sbjct: 106 DVTPSKKRKSGSGRGVAQKAEDNDESDEDDAKDLESPVKSGGRGGRGGTGASVAPASGRG 165

Query: 543 RKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
           R                              FMNFGERKDPPHKGEKEVPEG
Sbjct: 166 R------------------------GRGRGGFMNFGERKDPPHKGEKEVPEG 193


>ref|XP_002874040.1| AAA-type ATPase family protein [Arabidopsis lyrata subsp. lyrata]
           gi|297319877|gb|EFH50299.1| AAA-type ATPase family
           protein [Arabidopsis lyrata subsp. lyrata]
          Length = 960

 Score = 88.6 bits (218), Expect = 2e-15
 Identities = 70/227 (30%), Positives = 92/227 (40%), Gaps = 4/227 (1%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMKAH K +A+                    P   +  +   E++ R+KTS++
Sbjct: 1   MSDIRKWFMKAHEKGNAS-APKSTSSKAGPARNAAETAPLKSEQASEDLETAARRKTSKF 59

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKK 389
           F     K KDE+E E+  AKRK +  S    +DL  P  +K+ K   + D      P+ +
Sbjct: 60  FGKDKTKVKDEKEVEEIPAKRKLKTDS----DDLAKPRPRKVTKVVDDDDDDDFDVPISR 115

Query: 390 LLKAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSVXXXXXXXXVGG----TPRKPXX 557
             +                +P+KKLKS        K+V               TP K   
Sbjct: 116 KTR--------------DSTPSKKLKSGSGRGIASKTVDNDEDDDGEDAQDKETPLK--A 159

Query: 558 XXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                     FMNFGERKDPPHKGEKEVPEG
Sbjct: 160 AGRGRGGRAAPGASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 206


>ref|XP_004242616.1| PREDICTED: replication factor C subunit 1-like [Solanum
           lycopersicum]
          Length = 1012

 Score = 88.2 bits (217), Expect = 2e-15
 Identities = 70/242 (28%), Positives = 89/242 (36%), Gaps = 19/242 (7%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMK H K                        P+ E     GQE++ R+KTS+Y
Sbjct: 1   MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSPTS----PKPENLVQEGQETANRRKTSKY 56

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD--------GG 365
           FAT   K+K+E+  E +  ++ P  +  +       P  K++HKA+ E D        G 
Sbjct: 57  FATDKVKAKEEKVEEVSAKRKAPNAAGIS-----SAPAAKRIHKAEDEDDFVPVVSAMGS 111

Query: 366 SKPTPVKKLLKAKXXXXXXXXXXXXXPSPAKK-----LKSTPRNKGVK------KSVXXX 512
              TP KK +                     K     LKS  R +G +      K V   
Sbjct: 112 RDVTPSKKSVSGSGRGSAQKNVISDDSDDDLKNKNSDLKSAGRGRGGRAAKTSGKGVPLD 171

Query: 513 XXXXXVGGTPRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVP 692
                                                    FMNFGERKDPPHKGEKEVP
Sbjct: 172 ESEDDASAVKDNKSGGRGRGGKGPSAAPSGGRGRGGGGRGGFMNFGERKDPPHKGEKEVP 231

Query: 693 EG 698
           EG
Sbjct: 232 EG 233


>ref|XP_004140268.1| PREDICTED: replication factor C subunit 1-like [Cucumis sativus]
          Length = 981

 Score = 86.7 bits (213), Expect = 7e-15
 Identities = 73/229 (31%), Positives = 92/229 (40%), Gaps = 6/229 (2%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           MGDIRKWFMKAH K++ +                        K+   G ES+GR+ TS+Y
Sbjct: 1   MGDIRKWFMKAHDKDNGSGSKKAKPAPSSLEKSA-----SAGKTGPSGGESAGRQITSKY 55

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKK 389
           FA++  ++KD +E E     RK          D K  P K+  K +K  +   K +P+KK
Sbjct: 56  FASEKQEAKDAEETEVLPIIRKS-------PRDTKESPAKR--KFQKYNEESPKASPLKK 106

Query: 390 LLKA----KXXXXXXXXXXXXXPSPAKKLKSTPRNKGV--KKSVXXXXXXXXVGGTPRKP 551
             K                    +P KKLKS    KG+  K             GT    
Sbjct: 107 SNKVDDNDDDAVLSSSKKNMSEVTPNKKLKS-GSGKGITQKPVEIEASDDEETKGTDSSL 165

Query: 552 XXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                       FMNFGERKDPPHKGEKEVPEG
Sbjct: 166 KPSGRGRGGKGSSAATIGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 214


>ref|XP_006287008.1| hypothetical protein CARUB_v10000156mg [Capsella rubella]
           gi|482555714|gb|EOA19906.1| hypothetical protein
           CARUB_v10000156mg [Capsella rubella]
          Length = 953

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 70/227 (30%), Positives = 90/227 (39%), Gaps = 4/227 (1%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMKAH K + +                    P   +  +   +++ R+KTS+Y
Sbjct: 1   MSDIRKWFMKAHDKGNGS-----APKSTGAVKNAAETAPIKPEQASEDLDTAARRKTSKY 55

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKPTPVKK 389
           F     K KDE+E E+  AKRK +  S    +DL     +K+ K   + D    P   K 
Sbjct: 56  FGKDKTKVKDEKEVEELPAKRKLKTES----DDLSKARPRKVTKVDDDDDDFDVPISRK- 110

Query: 390 LLKAKXXXXXXXXXXXXXPSPAKKLKSTP----RNKGVKKSVXXXXXXXXVGGTPRKPXX 557
                              +P+KKLKS       +K V+K             TP K   
Sbjct: 111 ---------------TRDSTPSKKLKSGSGRGIASKTVEKDEDDDGEDAHEKETPLK--S 153

Query: 558 XXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
                                     FMNFGERKDPPHKGEKEVPEG
Sbjct: 154 GGRGRGGRAASGASTGGRGRGGGRGGFMNFGERKDPPHKGEKEVPEG 200


>ref|NP_680188.1| replication factor C1 [Arabidopsis thaliana]
           gi|75168909|sp|Q9C587.1|RFC1_ARATH RecName:
           Full=Replication factor C subunit 1; Short=AtRFC1;
           AltName: Full=Activator 1 large subunit; AltName:
           Full=Activator 1 subunit 1 gi|13374860|emb|CAC34494.1|
           replication factor C large subunit-like protein
           [Arabidopsis thaliana] gi|48958527|gb|AAT47816.1|
           At5g22010 [Arabidopsis thaliana]
           gi|332005585|gb|AED92968.1| replication factor C1
           [Arabidopsis thaliana]
          Length = 956

 Score = 83.6 bits (205), Expect = 6e-14
 Identities = 73/238 (30%), Positives = 95/238 (39%), Gaps = 15/238 (6%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMKAH K + +                     ++E+++    E++ R+KTS+Y
Sbjct: 1   MSDIRKWFMKAHEKGNGSAPKSTSSKAGPVKNAAETAPIKSEQASED-LETADRRKTSKY 59

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKDGGSKP----- 374
           F     K KDE+E E   AKRK +  S   D+ +KP P K       + D    P     
Sbjct: 60  FGKDKTKVKDEKEVEAIPAKRKLKTES---DDLVKPRPRKVTKVVDDDDDDFDVPISRKT 116

Query: 375 ---TPVKKL-------LKAKXXXXXXXXXXXXXPSPAKKLKSTPRNKGVKKSVXXXXXXX 524
              TP KKL       + +K              +P   LKS  R +G + +        
Sbjct: 117 RDTTPSKKLKSGSGRGIASKTVDNDDDDDGEDKETP---LKSAGRGRGGRAAPGASTGGR 173

Query: 525 XVGGTPRKPXXXXXXXXXXXXXXXXXXXXXXXXXXXXFMNFGERKDPPHKGEKEVPEG 698
             GG                                 FMNFGERKDPPHKGEKEVPEG
Sbjct: 174 GRGG-----------------------------GRGGFMNFGERKDPPHKGEKEVPEG 202


>ref|XP_006343613.1| PREDICTED: replication factor C subunit 1-like isoform X2 [Solanum
           tuberosum]
          Length = 992

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/110 (38%), Positives = 59/110 (53%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMK H K                      I P+ E     GQE++ R+KTS+Y
Sbjct: 1   MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSL----ISPKPENLVQEGQETTNRRKTSKY 56

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD 359
           FAT   K+K E++ E+  AKRK Q ++ +   + +PP  KK+HKA+ + D
Sbjct: 57  FATDKVKAK-EEKVEEVSAKRKAQSTAGSSSANERPPAAKKIHKAEDDDD 105


>ref|XP_006343612.1| PREDICTED: replication factor C subunit 1-like isoform X1 [Solanum
           tuberosum]
          Length = 993

 Score = 75.1 bits (183), Expect = 2e-11
 Identities = 42/110 (38%), Positives = 59/110 (53%)
 Frame = +3

Query: 30  MGDIRKWFMKAHTKNDATNXXXXXXXXXXXXXXXXXIIPQTEKSTNGGQESSGRKKTSRY 209
           M DIRKWFMK H K                      I P+ E     GQE++ R+KTS+Y
Sbjct: 1   MSDIRKWFMKQHDKGTGNGSMSKNSAAEKPSL----ISPKPENLVQEGQETTNRRKTSKY 56

Query: 210 FATKADKSKDEQEAEKTVAKRKPQESSKALDEDLKPPPVKKLHKAKKEKD 359
           FAT   K+K E++ E+  AKRK Q ++ +   + +PP  KK+HKA+ + D
Sbjct: 57  FATDKVKAK-EEKVEEVSAKRKAQSTAGSSSANERPPAAKKIHKAEDDDD 105