BLASTX nr result
ID: Papaver25_contig00012126
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00012126
(1002 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group] g... 201 4e-49
ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding prote... 200 9e-49
ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [S... 196 1e-47
ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825... 194 6e-47
gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidops... 192 2e-46
ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabi... 192 2e-46
ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protei... 192 2e-46
gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays] gi|41392... 191 4e-46
gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PB... 191 4e-46
gb|ACG35575.1| DNA binding protein [Zea mays] 189 1e-45
gb|AGE44298.1| whirly transcription factor domain containing pro... 189 2e-45
gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus... 189 2e-45
ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata] gi... 189 2e-45
ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protei... 188 3e-45
ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG4... 188 3e-45
pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis T... 187 6e-45
ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mit... 187 6e-45
ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protei... 185 2e-44
ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Caps... 184 4e-44
pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb... 184 5e-44
>ref|NP_001045956.1| Os02g0158400 [Oryza sativa Japonica Group]
gi|50251252|dbj|BAD28032.1| putative Chain C, Structure
Of The Plant Transcriptional Regulator Pbf-2 [Oryza
sativa Japonica Group] gi|50252182|dbj|BAD28177.1|
putative Chain C, Structure Of The Plant Transcriptional
Regulator Pbf-2 [Oryza sativa Japonica Group]
gi|113535487|dbj|BAF07870.1| Os02g0158400 [Oryza sativa
Japonica Group] gi|215692593|dbj|BAG88013.1| unnamed
protein product [Oryza sativa Japonica Group]
gi|215704516|dbj|BAG94149.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|215740785|dbj|BAG96941.1| unnamed protein product
[Oryza sativa Japonica Group]
gi|218190103|gb|EEC72530.1| hypothetical protein
OsI_05924 [Oryza sativa Indica Group]
gi|222622212|gb|EEE56344.1| hypothetical protein
OsJ_05450 [Oryza sativa Japonica Group]
Length = 228
Score = 201 bits (511), Expect = 4e-49
Identities = 106/225 (47%), Positives = 145/225 (64%), Gaps = 1/225 (0%)
Frame = +2
Query: 170 RKVSNTENALLSRSFVSQAVARPNPASDGDSGKVFVDYTIFKGKGALNMSPIPPKFSQLQ 349
R+V++ ++AL S S Q A + SG+ F YT+FKGK AL+M PI P FS+L+
Sbjct: 13 RRVTDLKDALWSGSLTFQHALSTFAADENTSGRKFASYTVFKGKAALSMQPILPSFSKLE 72
Query: 350 SGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPS 529
SGG ++++ G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP+ES EFFHDPS
Sbjct: 73 SGGS-RVNKNGSVMLTFFPAVGQRKYDYSKKQLFALSPTEVGSLISLGPAESCEFFHDPS 131
Query: 530 MQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYI 709
M+SS+ GQV+K LSV PLGN +G KT+++ +P+SKAEF VMR++ ++
Sbjct: 132 MKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPISKAEFTVMRTALSFA 191
Query: 710 LPRIMGWD-LLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
LP I+GWD L N Q S P + PD EW+R
Sbjct: 192 LPHILGWDQALTNHQPSPSPASKPRVERP--------HPDSEWER 228
>ref|XP_006646903.1| PREDICTED: single-stranded DNA-binding protein WHY2,
mitochondrial-like [Oryza brachyantha]
Length = 230
Score = 200 bits (508), Expect = 9e-49
Identities = 104/224 (46%), Positives = 145/224 (64%)
Frame = +2
Query: 170 RKVSNTENALLSRSFVSQAVARPNPASDGDSGKVFVDYTIFKGKGALNMSPIPPKFSQLQ 349
R+V++ ++AL S S Q A + SG+ F YT+FKGK AL+M P+ P FS+L+
Sbjct: 15 RRVTDLKDALWSGSLTFQHALSTLSADENTSGRKFASYTVFKGKAALSMHPVLPSFSKLE 74
Query: 350 SGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPS 529
SGG ++ R G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP+ES EFFHDPS
Sbjct: 75 SGGS-RVSRNGSVMLTFFPAVGQRKYDYSKKQIFALSPTEVGSLISLGPAESCEFFHDPS 133
Query: 530 MQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYI 709
M+SS+ GQV+K LSV PLGN +G KT+++ +P++KAEF VMR++ ++
Sbjct: 134 MKSSHEGQVKKSLSVTPLGNDSGYFLNITVLNNLQKTTERLSLPITKAEFAVMRTTLSFA 193
Query: 710 LPRIMGWDLLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
LP I+GWD Q+ + + SP H PD EW+R
Sbjct: 194 LPHILGWD-----QVLTNHHPSPPAASKPRAERPH--PDSEWER 230
>ref|XP_002453336.1| hypothetical protein SORBIDRAFT_04g004060 [Sorghum bicolor]
gi|241933167|gb|EES06312.1| hypothetical protein
SORBIDRAFT_04g004060 [Sorghum bicolor]
Length = 230
Score = 196 bits (499), Expect = 1e-47
Identities = 108/236 (45%), Positives = 147/236 (62%), Gaps = 5/236 (2%)
Frame = +2
Query: 149 LSEFL--LPRKVSNTENALLSRSFVSQAVARPNPASDGD--SGKVFVDYTIFKGKGALNM 316
LS FL R+ + + +LLS S Q + A+ D S K + YT+FKGK AL++
Sbjct: 4 LSRFLPSASRRGFDLKESLLSGSLTFQQAVSTSAANIDDNLSSKKYASYTVFKGKAALSI 63
Query: 317 SPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 496
PI P FS+L+SGG ++ R G++ML FFPAVGP+KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 QPILPSFSKLESGGS-RVSRNGSIMLTFFPAVGPRKYDFTKKQLFALSPTEVGSLISLGP 122
Query: 497 SESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 676
+ES EFFHDPSM+SSN G V+K LS+ PLG+ +G KT+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGMVKKSLSITPLGSDSGYFVNITVVNSVEKTNDRLSVPITKAE 182
Query: 677 FEVMRSSFNYILPRIMGWDLLFNPQLPASANVS-PEIRXXXXXXXXHLSPDPEWDR 841
F VMR++ ++ LP IMGWD P+ +S P + PD EW+R
Sbjct: 183 FAVMRTTLSFALPHIMGWDQALTNHHPSPPAISKPRVERP--------HPDSEWER 230
>ref|XP_003574931.1| PREDICTED: uncharacterized protein LOC100825843 [Brachypodium
distachyon]
Length = 231
Score = 194 bits (492), Expect = 6e-47
Identities = 107/237 (45%), Positives = 149/237 (62%), Gaps = 6/237 (2%)
Frame = +2
Query: 149 LSEFL--LPRKVSNTENALLSRSFVSQAVARPNPAS--DGDSGKVFVDYTIFKGKGALNM 316
LS FL RKVS+ ++ L S S + + A+ + S + F YT+FKGK AL++
Sbjct: 4 LSRFLPSTSRKVSDLKDVLWSGSVTFEHALSTSAANVDENASARKFASYTVFKGKAALSI 63
Query: 317 SPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 496
SPI P F++++SGG ++ + G++ML FFPAVG ++YD+ +Q FALS TE+G+LISLG
Sbjct: 64 SPILPNFTKIESGGS-RVKKNGSVMLTFFPAVGQRQYDYSKKQLFALSPTEVGSLISLGS 122
Query: 497 SESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 676
+ES EFFHDPSM+SS+ GQV+K LS+ PLGN G KT+++ VPV+KAE
Sbjct: 123 AESCEFFHDPSMKSSHEGQVKKSLSITPLGNDNGYFVNITVLNNVQKTNERLSVPVTKAE 182
Query: 677 FEVMRSSFNYILPRIMGWD--LLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
F VMR++ +Y LP IMGWD L +PQ P + P + PD EW+R
Sbjct: 183 FAVMRTALSYALPHIMGWDQALTSHPQSPTAPASKPRVERP--------HPDSEWER 231
>gb|AAG51881.1|AC016162_2 unknown protein; 79476-81015 [Arabidopsis thaliana]
Length = 237
Score = 192 bits (488), Expect = 2e-46
Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Frame = +2
Query: 206 RSFVSQAVARPNPASDGDSGKVFVDYTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGA 385
R F + A+P SG++F Y+IFKGK AL++ P+ P F+++ SG ++IDR+G+
Sbjct: 39 RGFPGKDAAKP-------SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGS 90
Query: 386 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKK 565
+M+ F PA+G +KYDW+ +Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK
Sbjct: 91 LMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKS 150
Query: 566 LSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLL-- 739
LSV+P +G+G KT+D F VPV+KAEF VM+++F++ LP IMGW+ L
Sbjct: 151 LSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG 210
Query: 740 -FNPQLPASANVSPEIRXXXXXXXXHLSPDP----EWDR 841
N + S NVS HL +P EWD+
Sbjct: 211 HVNTEALPSRNVS------------HLKTEPQLELEWDK 237
>ref|NP_177282.2| single-stranded DNA-binding protein WHY2 [Arabidopsis thaliana]
gi|75161474|sp|Q8VYF7.1|WHY2_ARATH RecName:
Full=Single-stranded DNA-binding protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=AtWHY2; Flags: Precursor
gi|18175814|gb|AAL59932.1| unknown protein [Arabidopsis
thaliana] gi|21689867|gb|AAM67494.1| unknown protein
[Arabidopsis thaliana] gi|225898076|dbj|BAH30370.1|
hypothetical protein [Arabidopsis thaliana]
gi|332197060|gb|AEE35181.1| single-stranded DNA-binding
protein WHY2 [Arabidopsis thaliana]
Length = 238
Score = 192 bits (488), Expect = 2e-46
Identities = 101/219 (46%), Positives = 142/219 (64%), Gaps = 7/219 (3%)
Frame = +2
Query: 206 RSFVSQAVARPNPASDGDSGKVFVDYTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGA 385
R F + A+P SG++F Y+IFKGK AL++ P+ P F+++ SG ++IDR+G+
Sbjct: 40 RGFPGKDAAKP-------SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGS 91
Query: 386 MMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKK 565
+M+ F PA+G +KYDW+ +Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK
Sbjct: 92 LMMTFMPAIGERKYDWEKKQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKS 151
Query: 566 LSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLL-- 739
LSV+P +G+G KT+D F VPV+KAEF VM+++F++ LP IMGW+ L
Sbjct: 152 LSVKPHADGSGYFISLSVNNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTG 211
Query: 740 -FNPQLPASANVSPEIRXXXXXXXXHLSPDP----EWDR 841
N + S NVS HL +P EWD+
Sbjct: 212 HVNTEALPSRNVS------------HLKTEPQLELEWDK 238
>ref|XP_004951836.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like [Setaria italica]
Length = 229
Score = 192 bits (487), Expect = 2e-46
Identities = 104/235 (44%), Positives = 145/235 (61%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LSEFL--LPRKVSNTENALLSRSFVSQAVARPNPAS--DGDSGKVFVDYTIFKGKGALNM 316
LS FL R+ + + AL S S Q + A+ + SGK F YT+FKGK AL++
Sbjct: 4 LSRFLPSASRRGFDPKEALWSGSLTFQQAVSTSAANLDENSSGKKFASYTVFKGKAALSI 63
Query: 317 SPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 496
PI P F +++SG +I+R G++ML FFPAVG +KYD+ +Q F+LS TE+G+LISLGP
Sbjct: 64 HPILPSFCKMESGAS-RINRNGSVMLTFFPAVGQRKYDYTKKQLFSLSPTEVGSLISLGP 122
Query: 497 SESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 676
+ES EFFHDPSM+SS+ GQV+K LS+ PLG+ +G KT+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSHEGQVKKSLSITPLGSDSGYFVNITVLNNMQKTTDRLSVPITKAE 182
Query: 677 FEVMRSSFNYILPRIMGWDLLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
F VMR++ ++ LP IMGWD + A+ P + PD EW+R
Sbjct: 183 FAVMRTALSFALPHIMGWDQVLTRHPAPQASSKPRVERP--------HPDSEWER 229
>gb|AFW66475.1| DNA binding protein isoform 1 [Zea mays]
gi|413926544|gb|AFW66476.1| DNA binding protein isoform
2 [Zea mays]
Length = 274
Score = 191 bits (485), Expect = 4e-46
Identities = 109/235 (46%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LSEFLLP--RKVSNTENALLSRSFV-SQAVARPNPASDGD-SGKVFVDYTIFKGKGALNM 316
LS FL R+ + + +L S S QAV+ DG+ SGK F YT+FKGK AL++
Sbjct: 46 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 105
Query: 317 SPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 496
PI P FS+L+SGG ++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 106 HPILPSFSKLESGGS-RVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 164
Query: 497 SESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 676
+ES EFFHDPSM+SSN G V+K LS+ PLG+ +G +T+D+ VP++KAE
Sbjct: 165 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 224
Query: 677 FEVMRSSFNYILPRIMGWDLLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
F V+R++ ++ LP IMGWD PA A P H PD EW+R
Sbjct: 225 FAVIRTTLSFALPHIMGWDQALTNHHPAPA---PPASSRPTVERPH--PDSEWER 274
>gb|ACF85629.1| unknown [Zea mays] gi|323388661|gb|ADX60135.1| PBF-2 like
transcription factor [Zea mays]
gi|323388771|gb|ADX60190.1| PBF-2 like transcription
factor [Zea mays]
Length = 232
Score = 191 bits (485), Expect = 4e-46
Identities = 109/235 (46%), Positives = 147/235 (62%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LSEFLLP--RKVSNTENALLSRSFV-SQAVARPNPASDGD-SGKVFVDYTIFKGKGALNM 316
LS FL R+ + + +L S S QAV+ DG+ SGK F YT+FKGK AL++
Sbjct: 4 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 63
Query: 317 SPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 496
PI P FS+L+SGG ++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 HPILPSFSKLESGGS-RVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 122
Query: 497 SESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 676
+ES EFFHDPSM+SSN G V+K LS+ PLG+ +G +T+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 182
Query: 677 FEVMRSSFNYILPRIMGWDLLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
F V+R++ ++ LP IMGWD PA A P H PD EW+R
Sbjct: 183 FAVIRTTLSFALPHIMGWDQALTNHHPAPA---PPASSRPTVERPH--PDSEWER 232
>gb|ACG35575.1| DNA binding protein [Zea mays]
Length = 230
Score = 189 bits (481), Expect = 1e-45
Identities = 101/211 (47%), Positives = 138/211 (65%), Gaps = 4/211 (1%)
Frame = +2
Query: 221 QAVARPNPASDGD-SGKVFVDYTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGAMMLN 397
QAV+ DG+ SGK F YT+FKGK AL++ PI P FS+L+SGG ++ + G++ML
Sbjct: 31 QAVSTAATNLDGNLSGKKFASYTVFKGKAALSIHPILPSFSKLESGGS-RVSKNGSVMLT 89
Query: 398 FFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQ 577
FFPAVG +KYD+ +Q FALS TE+G+LISLGP+ES EFFHDPSM+SSN G V+K LS+
Sbjct: 90 FFPAVGQRKYDYTKKQLFALSPTEVGSLISLGPAESCEFFHDPSMKSSNEGTVKKSLSIT 149
Query: 578 PLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLLF---NP 748
PLG+ +G +T+D+ VP++KAEF V+R++ ++ LP IMGWD +P
Sbjct: 150 PLGSDSGYFVNITVVNSAERTNDRLSVPITKAEFAVIRTTLSFALPHIMGWDQALTNHHP 209
Query: 749 QLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
PAS+ + E PD EW+R
Sbjct: 210 APPASSRPTVE----------RPHPDSEWER 230
>gb|AGE44298.1| whirly transcription factor domain containing protein [Musa AB
Group]
Length = 245
Score = 189 bits (480), Expect = 2e-45
Identities = 97/210 (46%), Positives = 137/210 (65%), Gaps = 2/210 (0%)
Frame = +2
Query: 218 SQAVARPNPASDGDSGKVFVDYTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGAMMLN 397
S +V P + S + +V+YT+FKGK AL++SPI P F ++ SG ++ +KG ++L
Sbjct: 44 SSSVRPPFSPTGSSSVRRYVEYTVFKGKAALSVSPILPTFREVDSGVS-RVHKKGCVILT 102
Query: 398 FFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQ 577
F+PA+G +KYDWQ +Q FALS TE+G+LI LGP+ES EFFHDPSM+SS GQV+K LS+
Sbjct: 103 FWPAIGQRKYDWQKKQAFALSPTEVGSLIGLGPAESCEFFHDPSMKSSLEGQVKKSLSIS 162
Query: 578 PLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLLFNPQLP 757
PL + AG KT+++F +PVSKAEF +R+ F+Y+LP IMGW +PQ P
Sbjct: 163 PLNDKAGYLLNLSVVNNIQKTNERFSLPVSKAEFTAIRTVFSYVLPHIMGWSQAASPQPP 222
Query: 758 ASANVSPEIRXXXXXXXXHLSPDP--EWDR 841
++A +P+ + PDP EW R
Sbjct: 223 STATHTPKEQIEE-------RPDPSLEWGR 245
>gb|EYU22695.1| hypothetical protein MIMGU_mgv1a012912mg [Mimulus guttatus]
Length = 236
Score = 189 bits (479), Expect = 2e-45
Identities = 109/241 (45%), Positives = 148/241 (61%), Gaps = 10/241 (4%)
Frame = +2
Query: 149 LSEFLLPRKVSNTENALLSRSFVSQA---------VARPNPASDGDSG-KVFVDYTIFKG 298
LS LL S++ ++L +S VS+A + + S G S KVF Y+I+KG
Sbjct: 4 LSRLLLQ---SSSRDSLSLKSLVSEATIDLKLLRGLTTQSGISTGKSAAKVFAPYSIYKG 60
Query: 299 KGALNMSPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGA 478
K AL+ P+ P F++LQSGG K++R+G++ML F+PA+G +KYDW RQ FALS TE+G+
Sbjct: 61 KAALSADPLLPMFTKLQSGG-YKVERRGSIMLTFWPAIGERKYDWDKRQKFALSATEVGS 119
Query: 479 LISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYV 658
LISLG +S EFFHDPSM SSNAGQVRK LS++ +G+G KT+D+F V
Sbjct: 120 LISLGSKDSCEFFHDPSMLSSNAGQVRKSLSIKAHADGSGYFVSLSVVNNILKTNDRFVV 179
Query: 659 PVSKAEFEVMRSSFNYILPRIMGWDLLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWD 838
PV+ AEF VMR++F + LP ++GWD N Q+P A+ S P EWD
Sbjct: 180 PVTTAEFAVMRTAFTFALPHLIGWDQYTN-QVPHCASKSSPTAAAAALPQL---PSSEWD 235
Query: 839 R 841
R
Sbjct: 236 R 236
>ref|XP_002888827.1| ATWHY2 [Arabidopsis lyrata subsp. lyrata]
gi|297334668|gb|EFH65086.1| ATWHY2 [Arabidopsis lyrata
subsp. lyrata]
Length = 242
Score = 189 bits (479), Expect = 2e-45
Identities = 95/201 (47%), Positives = 135/201 (67%), Gaps = 7/201 (3%)
Frame = +2
Query: 260 SGKVFVDYTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQN 439
SG++F Y+IFKGK AL++ P+ P F+++ SG ++IDR+G++M+ F PA+G +KYDW+
Sbjct: 55 SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGSLMMTFMPAIGERKYDWEK 113
Query: 440 RQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXX 619
+Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK LS++P +G+G
Sbjct: 114 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLSV 173
Query: 620 XXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLLF---NPQLPASANVSPEIRX 790
KT+D F VPV+KAEF VM+++F++ LP IMGW+ L N + NV+
Sbjct: 174 NNGILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRLTGQGNTEALPPRNVT----- 228
Query: 791 XXXXXXXHLSPDP----EWDR 841
HL DP EWD+
Sbjct: 229 -------HLKTDPQLELEWDK 242
>ref|XP_004250750.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 2 [Solanum lycopersicum]
Length = 235
Score = 188 bits (477), Expect = 3e-45
Identities = 96/192 (50%), Positives = 134/192 (69%), Gaps = 1/192 (0%)
Frame = +2
Query: 173 KVSNTENALLSRSFVSQAVARPNPASDGD-SGKVFVDYTIFKGKGALNMSPIPPKFSQLQ 349
K S +NA+ +F + + R + +DG G+VF Y++FKGK AL+ P P F++L
Sbjct: 23 KGSIWQNAI--NTFAAFSTVRQDVVADGKREGRVFAPYSVFKGKAALSAEPRLPTFNRLD 80
Query: 350 SGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDPS 529
SGG +K++R+G +ML F+P+VG +KYDW+ RQ FALS TE+G+LIS+G +S+EFFHDPS
Sbjct: 81 SGG-VKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDPS 139
Query: 530 MQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNYI 709
M SSNAGQVRK LS++P +G+G KT+D+F VPV+ AEF VMR++F++
Sbjct: 140 MLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSFA 199
Query: 710 LPRIMGWDLLFN 745
LP IMGWD N
Sbjct: 200 LPHIMGWDRFTN 211
>ref|NP_001152589.1| LOC100286229 [Zea mays] gi|195657845|gb|ACG48390.1| DNA binding
protein [Zea mays]
Length = 232
Score = 188 bits (477), Expect = 3e-45
Identities = 108/235 (45%), Positives = 146/235 (62%), Gaps = 4/235 (1%)
Frame = +2
Query: 149 LSEFLLP--RKVSNTENALLSRSFV-SQAVARPNPASDGD-SGKVFVDYTIFKGKGALNM 316
LS FL R+ + + +L S S QAV+ DG+ SGK F YT+FKGK AL++
Sbjct: 4 LSRFLPSACRRGFDLKESLWSGSLTFQQAVSTAATNLDGNLSGKKFASYTVFKGKAALSI 63
Query: 317 SPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGP 496
PI FS+L+SGG ++ + G++ML FFPAVG +KYD+ +Q FALS TE+G+LISLGP
Sbjct: 64 HPILXSFSKLESGGS-RVSKNGSVMLTFFPAVGQRKYDYTKKQLFALSPTEVGSLISLGP 122
Query: 497 SESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAE 676
+ES EFFHDPSM+SSN G V+K LS+ PLG+ +G +T+D+ VP++KAE
Sbjct: 123 AESCEFFHDPSMKSSNEGTVKKSLSITPLGSDSGYFVNITVVNSAERTNDRLSVPITKAE 182
Query: 677 FEVMRSSFNYILPRIMGWDLLFNPQLPASANVSPEIRXXXXXXXXHLSPDPEWDR 841
F V+R++ ++ LP IMGWD PA A P H PD EW+R
Sbjct: 183 FAVIRTTLSFALPHIMGWDQALTNHHPAPA---PPASSRPTVERPH--PDSEWER 232
>pdb|4KOP|A Chain A, Crystal Structure Of Why2 From Arabidopsis Thaliana
gi|557805000|pdb|4KOP|B Chain B, Crystal Structure Of
Why2 From Arabidopsis Thaliana gi|557805001|pdb|4KOP|C
Chain C, Crystal Structure Of Why2 From Arabidopsis
Thaliana gi|557805002|pdb|4KOP|D Chain D, Crystal
Structure Of Why2 From Arabidopsis Thaliana
Length = 177
Score = 187 bits (475), Expect = 6e-45
Identities = 86/160 (53%), Positives = 122/160 (76%)
Frame = +2
Query: 260 SGKVFVDYTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQN 439
SG++F Y+IFKGK AL++ P+ P F+++ SG ++IDR+G++M+ F PA+G +KYDW+
Sbjct: 8 SGRLFAPYSIFKGKAALSVEPVLPSFTEIDSGN-LRIDRRGSLMMTFMPAIGERKYDWEK 66
Query: 440 RQGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXX 619
+Q FALS TE+G+LIS+G +S+EFFHDPSM+SSNAGQVRK LSV+P +G+G
Sbjct: 67 KQKFALSPTEVGSLISMGSKDSSEFFHDPSMKSSNAGQVRKSLSVKPHADGSGYFISLSV 126
Query: 620 XXXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLL 739
KT+D F VPV+KAEF VM+++F++ LP IMGW+ L
Sbjct: 127 NNSILKTNDYFVVPVTKAEFAVMKTAFSFALPHIMGWNRL 166
>ref|NP_001275393.1| single-stranded DNA-bindig protein WHY2, mitochondrial [Solanum
tuberosum] gi|426021772|sp|D9J034.1|WHY2_SOLTU RecName:
Full=Single-stranded DNA-bindig protein WHY2,
mitochondrial; AltName: Full=Protein WHIRLY 2;
Short=StWHY2; Flags: Precursor
gi|298359665|gb|ADI77438.1| Why2 protein [Solanum
tuberosum]
Length = 238
Score = 187 bits (475), Expect = 6e-45
Identities = 102/215 (47%), Positives = 141/215 (65%), Gaps = 5/215 (2%)
Frame = +2
Query: 116 KFSQVLTVRRPLSEFLLPR---KVSNTENALLSRSFVSQAVARPNPASDGDS--GKVFVD 280
K S++L R L LP K S ++A+ +F + R N +D G+VF
Sbjct: 3 KVSRLLHPRNQLLHKKLPGECVKGSIWQHAI--NTFAGFSTVRQNVVADAGKREGRVFAP 60
Query: 281 YTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALS 460
Y++FKGK AL+ P P F++L SGG +K++R+G +ML F+P+VG +KYDW+ RQ FALS
Sbjct: 61 YSVFKGKAALSAEPRLPTFNRLDSGG-VKLNRRGVIMLTFWPSVGERKYDWEKRQLFALS 119
Query: 461 VTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKT 640
TE+G+LIS+G +S+EFFHDPSM SSNAGQVRK LS++P +G+G KT
Sbjct: 120 ATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVVNNNLKT 179
Query: 641 SDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLLFN 745
+D+F VPV+ AEF VMR++F++ LP IMGWD N
Sbjct: 180 NDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTN 214
>ref|XP_004250749.1| PREDICTED: single-stranded DNA-bindig protein WHY2,
mitochondrial-like isoform 1 [Solanum lycopersicum]
Length = 238
Score = 185 bits (470), Expect = 2e-44
Identities = 95/193 (49%), Positives = 133/193 (68%), Gaps = 2/193 (1%)
Frame = +2
Query: 173 KVSNTENALLSRSFVSQAVARPNPASDGDS--GKVFVDYTIFKGKGALNMSPIPPKFSQL 346
K S +NA+ +F + + R + +D G+VF Y++FKGK AL+ P P F++L
Sbjct: 25 KGSIWQNAI--NTFAAFSTVRQDVVADAGKREGRVFAPYSVFKGKAALSAEPRLPTFNRL 82
Query: 347 QSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLGPSESAEFFHDP 526
SGG +K++R+G +ML F+P+VG +KYDW+ RQ FALS TE+G+LIS+G +S+EFFHDP
Sbjct: 83 DSGG-VKLNRRGVIMLTFWPSVGERKYDWEKRQLFALSATEVGSLISMGTRDSSEFFHDP 141
Query: 527 SMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKAEFEVMRSSFNY 706
SM SSNAGQVRK LS++P +G+G KT+D+F VPV+ AEF VMR++F++
Sbjct: 142 SMLSSNAGQVRKSLSIKPNADGSGYFVSLSVVNNNLKTNDRFTVPVTTAEFAVMRTAFSF 201
Query: 707 ILPRIMGWDLLFN 745
LP IMGWD N
Sbjct: 202 ALPHIMGWDRFTN 214
>ref|XP_006302758.1| hypothetical protein CARUB_v10020880mg [Capsella rubella]
gi|482571468|gb|EOA35656.1| hypothetical protein
CARUB_v10020880mg [Capsella rubella]
Length = 234
Score = 184 bits (468), Expect = 4e-44
Identities = 92/202 (45%), Positives = 133/202 (65%), Gaps = 2/202 (0%)
Frame = +2
Query: 140 RRPLSEFLLPRKVSNTENALLSRSFVSQAVARPNPASDG--DSGKVFVDYTIFKGKGALN 313
R LS L + S + A R F S + + SG+VF Y IFKGK AL+
Sbjct: 6 RTLLSRSLCDQSKSLFDGASTLRGFASWSTGSGFSGKEAAKPSGRVFAPYAIFKGKAALS 65
Query: 314 MSPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNRQGFALSVTEIGALISLG 493
+ P+ P F+++ SG +++DR+G++M+ F PA G +KYDW+ +Q FALS TE+G+LIS+G
Sbjct: 66 VEPVLPTFTEIDSGN-LRLDRRGSLMMTFMPASGERKYDWEKKQKFALSPTEVGSLISMG 124
Query: 494 PSESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXXXXXXKTSDQFYVPVSKA 673
+S+EFFHDPSM+SSNAGQVRK LS++P +G+G KT+D+ VPV+ A
Sbjct: 125 SKDSSEFFHDPSMKSSNAGQVRKSLSIKPHADGSGYFISLGVINSILKTNDRIVVPVTTA 184
Query: 674 EFEVMRSSFNYILPRIMGWDLL 739
EF VM+++F+++LP +MGWD L
Sbjct: 185 EFTVMKTAFSFVLPHLMGWDRL 206
>pdb|3N1H|A Chain A, Crystal Structure Of Stwhy2 gi|302566180|pdb|3N1I|A Chain
A, Crystal Structure Of A Stwhy2-Ere32 Complex
gi|302566182|pdb|3N1J|A Chain A, Crystal Structure Of A
Stwhy2-Dt32 Complex gi|302566184|pdb|3N1K|A Chain A,
Crystal Structure Of A Stwhy2-Cere32 Complex
gi|302566186|pdb|3N1L|A Chain A, Crystal Structure Of A
Stwhy2-Rcere32 Complex
Length = 178
Score = 184 bits (467), Expect = 5e-44
Identities = 89/164 (54%), Positives = 120/164 (73%)
Frame = +2
Query: 263 GKVFVDYTIFKGKGALNMSPIPPKFSQLQSGGGMKIDRKGAMMLNFFPAVGPKKYDWQNR 442
G+VF Y++FKGK AL+ P P F++L SGG +K++R+G +ML F+P+VG +KYDW+ R
Sbjct: 9 GRVFAPYSVFKGKAALSAEPRLPTFNRLDSGG-VKLNRRGVIMLTFWPSVGERKYDWEKR 67
Query: 443 QGFALSVTEIGALISLGPSESAEFFHDPSMQSSNAGQVRKKLSVQPLGNGAGXXXXXXXX 622
Q FALS TE+G+LIS+G +S+EFFHDPSM SSNAGQVRK LS++P +G+G
Sbjct: 68 QLFALSATEVGSLISMGTRDSSEFFHDPSMLSSNAGQVRKSLSIKPNADGSGYFISLSVV 127
Query: 623 XXXXKTSDQFYVPVSKAEFEVMRSSFNYILPRIMGWDLLFNPQL 754
KT+D+F VPV+ AEF VMR++F++ LP IMGWD N L
Sbjct: 128 NNNLKTNDRFTVPVTTAEFAVMRTAFSFALPHIMGWDRFTNRPL 171