BLASTX nr result

ID: Papaver25_contig00011521 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00011521
         (543 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prun...    61   2e-07
ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containi...    56   6e-06

>ref|XP_007212021.1| hypothetical protein PRUPE_ppa004899mg [Prunus persica]
           gi|462407886|gb|EMJ13220.1| hypothetical protein
           PRUPE_ppa004899mg [Prunus persica]
          Length = 486

 Score = 60.8 bits (146), Expect = 2e-07
 Identities = 31/65 (47%), Positives = 45/65 (69%), Gaps = 2/65 (3%)
 Frame = +3

Query: 354 NSTPPFLQQSGLTRKPFLRISCVSA--KRKTGSVSEKSESQELVYLLLRNFKDQKPLIST 527
           N T P+L    L ++P  RISCVS   KRK G+ +E  + +E+V +L+R+F D++PL+ T
Sbjct: 26  NLTQPWLPHVLLRKRPVTRISCVSTRPKRKPGTKTEDPDVREVVRMLMRSFSDKEPLLKT 85

Query: 528 LNKYV 542
           LNKYV
Sbjct: 86  LNKYV 90


>ref|XP_006354698.1| PREDICTED: pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X1 [Solanum tuberosum]
           gi|565376411|ref|XP_006354699.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X2 [Solanum tuberosum]
           gi|565376413|ref|XP_006354700.1| PREDICTED:
           pentatricopeptide repeat-containing protein At4g39620,
           chloroplastic-like isoform X3 [Solanum tuberosum]
          Length = 457

 Score = 55.8 bits (133), Expect = 6e-06
 Identities = 30/53 (56%), Positives = 38/53 (71%), Gaps = 3/53 (5%)
 Frame = +3

Query: 393 RKPFLRISCVSAK---RKTGSVSEKSESQELVYLLLRNFKDQKPLISTLNKYV 542
           R  F  I CVS +   RK+G  S  SE+QELV L++RNF D+KPL+STL+KYV
Sbjct: 10  RPVFSIIHCVSTRPGGRKSGYGSSSSEAQELVTLVMRNFSDKKPLVSTLDKYV 62


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