BLASTX nr result

ID: Papaver25_contig00011346 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00011346
         (508 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]    57   2e-06
ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containi...    56   5e-06
emb|CBI37948.3| unnamed protein product [Vitis vinifera]               56   5e-06

>emb|CAN69936.1| hypothetical protein VITISV_038780 [Vitis vinifera]
          Length = 1206

 Score = 57.4 bits (137), Expect = 2e-06
 Identities = 40/140 (28%), Positives = 65/140 (46%)
 Frame = +3

Query: 18  LSQVMVESVSSAETTISGMDVNGHIHTEEKLENEVEEASEFQVPSYTAFLRESVREGLHT 197
           LS  +V++ S A +    + + G     E+         E ++ S+T   R+++RE L+T
Sbjct: 250 LSTPVVQTKSIAASVPDIIALEG---VNERKNRGGRPGEESEIISFTGIFRDTIREELYT 306

Query: 198 FYEESQSEMKSIPSLKEFKAIFPRISKAHINNASSLLEPTTTLSREELSLNGSHEKTGFL 377
           FYE  QS MK +P+    K +    S    N  S  +   T+    ELS   SH    ++
Sbjct: 307 FYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATS-KEAELSAQNSHSSADYV 365

Query: 378 RGEVPISSTKGRGPSRKRKN 437
            G++ +S  K  G S KR +
Sbjct: 366 EGKMSLSCYK-EGSSGKRNB 384


>ref|XP_002276432.2| PREDICTED: pentatricopeptide repeat-containing protein At4g34830,
           chloroplastic-like [Vitis vinifera]
          Length = 1115

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 40/140 (28%), Positives = 65/140 (46%)
 Frame = +3

Query: 18  LSQVMVESVSSAETTISGMDVNGHIHTEEKLENEVEEASEFQVPSYTAFLRESVREGLHT 197
           LS  +V++ S A +    + + G     E+         E ++ S+T   R+++RE L+T
Sbjct: 250 LSTPVVQTKSIAASVPDIIALEG---VNERKNRGGRPGEESEIISFTGIFRDTIREELYT 306

Query: 198 FYEESQSEMKSIPSLKEFKAIFPRISKAHINNASSLLEPTTTLSREELSLNGSHEKTGFL 377
           FYE  QS MK +P+    K +    S    N  S  +   T+    ELS   SH    ++
Sbjct: 307 FYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATS-KEAELSAQNSHSSADYV 365

Query: 378 RGEVPISSTKGRGPSRKRKN 437
            G++ +S  K  G S KR +
Sbjct: 366 EGKMSLSCYK-EGSSGKRND 384


>emb|CBI37948.3| unnamed protein product [Vitis vinifera]
          Length = 1550

 Score = 56.2 bits (134), Expect = 5e-06
 Identities = 40/140 (28%), Positives = 65/140 (46%)
 Frame = +3

Query: 18   LSQVMVESVSSAETTISGMDVNGHIHTEEKLENEVEEASEFQVPSYTAFLRESVREGLHT 197
            LS  +V++ S A +    + + G     E+         E ++ S+T   R+++RE L+T
Sbjct: 685  LSTPVVQTKSIAASVPDIIALEG---VNERKNRGGRPGEESEIISFTGIFRDTIREELYT 741

Query: 198  FYEESQSEMKSIPSLKEFKAIFPRISKAHINNASSLLEPTTTLSREELSLNGSHEKTGFL 377
            FYE  QS MK +P+    K +    S    N  S  +   T+    ELS   SH    ++
Sbjct: 742  FYEAKQSVMKPMPNFNGIKTLASNASLLDGNGVSFQMRNATS-KEAELSAQNSHSSADYV 800

Query: 378  RGEVPISSTKGRGPSRKRKN 437
             G++ +S  K  G S KR +
Sbjct: 801  EGKMSLSCYK-EGSSGKRND 819


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