BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00011253
         (1191 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...   423   e-116
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...   422   e-115
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...   419   e-114
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]     414   e-113
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]   414   e-113
emb|CBI21038.3| unnamed protein product [Vitis vinifera]              413   e-113
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    413   e-113
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...   413   e-113
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]     412   e-112
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...   411   e-112
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    410   e-112
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...   408   e-111
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   407   e-111
ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   405   e-110
ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lyco...   403   e-110
gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus...   402   e-109
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   402   e-109
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...   402   e-109
gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]   402   e-109
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...   402   e-109

>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score =  423 bits (1088), Expect = e-116
 Identities = 198/329 (60%), Positives = 251/329 (76%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSKRSWIPM Y   E + L R +N  DI++FF KNMVN+ LG ICN+HVVH
Sbjct: 875  VTWDENLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVH 934

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS+YGA D+ C+ LAELAATAVDFPKTGKVV+MP  LKPKMYPDFMGKE++ SYKS+K
Sbjct: 935  ADLSEYGATDKNCLTLAELAATAVDFPKTGKVVSMPPYLKPKMYPDFMGKEEYQSYKSEK 994

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG LYR+IKD+ D  V  S +  L      DIPYD+DLE+ G++D+I +AWD+KC YDG
Sbjct: 995  ILGRLYRQIKDAYDEDVAASSELNLVP---GDIPYDSDLEVVGASDYISDAWDQKCSYDG 1051

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QLN LL Q+ VK EEEVVTGH+WSMPKY++R           +YNS+K+EF+++F+ +  
Sbjct: 1052 QLNGLLSQYKVKREEEVVTGHIWSMPKYSSRKQGELKDRLKHSYNSLKKEFRQIFEKMDL 1111

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 291
            + + L + EKN +YEQKASAWYQV YHP WVKKS+EL++ D    + MLSFAW+ A+YL 
Sbjct: 1112 EFEQLEDGEKNKLYEQKASAWYQVVYHPHWVKKSLELQDPDGAGTSVMLSFAWIAADYLA 1171

Query: 290  RIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            RIKIR R+  ++D  KP+NSLA YL  ++
Sbjct: 1172 RIKIRHRETGNVDSAKPVNSLAKYLADRM 1200


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score =  422 bits (1084), Expect = e-115
 Identities = 202/334 (60%), Positives = 243/334 (72%), Gaps = 5/334 (1%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSKRSW+PM Y   E ++L R +N  DI+DFF KNMVNE LG ICN+HVVH
Sbjct: 872  VTWDENLIPPSKRSWLPMQYDAAEAKQLNRPVNHQDIIDFFAKNMVNENLGAICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS+YGA+DE CIKLAELAATAVDFPKTGK+V MP  LKPK+YPDFMGKED+ SY S K
Sbjct: 932  ADLSEYGALDENCIKLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEDYQSYNSNK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQV-----DDIPYDTDLEIPGSADFIREAWDRK 666
            +LG LYR++KD  D    D D D  A          DIPYD DLE+ GS+D+I +AWD+K
Sbjct: 992  ILGRLYRQVKD--DYNDDDDDDDDAATSSELNLVRGDIPYDKDLEVSGSSDYILDAWDQK 1049

Query: 665  CLYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVF 486
            C YDGQL  LL Q+ VK EEEVVTGH+WSMPK N+R           +Y+S+K+EF++VF
Sbjct: 1050 CSYDGQLKGLLAQYKVKREEEVVTGHIWSMPKCNSRKQGELKERLKQSYHSLKKEFRQVF 1109

Query: 485  DNLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVP 306
            + +  D + LTE EKN +YEQKASAWYQV YHP+WV KS+EL+  D      MLSFAW+ 
Sbjct: 1110 EKMDSDFEQLTEDEKNLLYEQKASAWYQVAYHPKWVNKSMELQEPDAAGCASMLSFAWIA 1169

Query: 305  AEYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            A+YL RIKIR R    +D  KP+NSL  YL  +I
Sbjct: 1170 ADYLARIKIRCRGFDGVDTSKPVNSLVKYLADRI 1203


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score =  419 bits (1076), Expect = e-114
 Identities = 201/333 (60%), Positives = 250/333 (75%), Gaps = 4/333 (1%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSKRSWIPM Y   E ++L R +N  DIV+FF KNM NE LG ICN+HVV 
Sbjct: 872  VTWDENLIPPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVR 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS+YGA+DEKC+ LAELAATAVDFPKTGK+V+MP +LKPK+YPDFMGKE+  SYKSKK
Sbjct: 932  ADLSEYGALDEKCLTLAELAATAVDFPKTGKIVSMPSDLKPKIYPDFMGKEEHQSYKSKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVD----DIPYDTDLEIPGSADFIREAWDRKC 663
            +LG LYR+IKD+ D      D D  A  +++    DIPYD DLE+ G+ DFI +AWDRKC
Sbjct: 992  ILGRLYRQIKDAYD------DDDVAASSELNFVRGDIPYDLDLEVLGATDFISDAWDRKC 1045

Query: 662  LYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFD 483
             YDGQLN LL Q+ VK EEEVVTGHVWSMPK ++R           +YN +KREF++VF+
Sbjct: 1046 SYDGQLNGLLAQYKVKREEEVVTGHVWSMPKGSSRKQGDLKERLKHSYNCLKREFRQVFE 1105

Query: 482  NLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPA 303
             +  D   L + EKN +YE+KASAWYQVTYHP W++KS+EL++SD    + MLSFAW+ A
Sbjct: 1106 KMDLDFGQLDDDEKNMLYERKASAWYQVTYHPHWIQKSLELQDSDGAGISVMLSFAWIAA 1165

Query: 302  EYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            +YL RIKIR   + ++D  KP+NSLA YL  ++
Sbjct: 1166 DYLARIKIRHSRIGNVDSAKPVNSLAKYLADRM 1198


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  414 bits (1065), Expect = e-113
 Identities = 201/331 (60%), Positives = 250/331 (75%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SWIPM+Y P E+++L R +N  DI+DFF KNMV E LG ICN+HVVH
Sbjct: 872  VTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKSKK
Sbjct: 932  ADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKCLY 657
            +LG+LYR++KD     V D++ +  A  +V   DIPYDT LEI GS  FI +AW+ KC Y
Sbjct: 992  ILGKLYRQVKD-----VCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSY 1046

Query: 656  DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 477
            DGQLN LL Q+ V  EEEVVTG++WSMPKYN +           AYN++++EF+ VF+ +
Sbjct: 1047 DGQLNGLLGQYKVNREEEVVTGYIWSMPKYNAKKQGELKERLKHAYNTLRKEFRNVFERM 1106

Query: 476  GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 297
              D   L + EKN +YE+KASAWYQVTYHP WV +S+EL+ +D    T MLSFAW+ A+Y
Sbjct: 1107 EPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLADAVSNTVMLSFAWIAADY 1166

Query: 296  LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            L RIKIR R +++ D  KPINSL  YLV  I
Sbjct: 1167 LARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score =  414 bits (1064), Expect = e-113
 Identities = 200/331 (60%), Positives = 249/331 (75%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDEN++PPSK+SWIPM+Y P E+++L R +N  DI+DFF KNMV E LG ICN+HVVH
Sbjct: 872  VTWDENIIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKSKK
Sbjct: 932  ADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKCLY 657
            +LG+LYR++KD     V D++ +  A  +V   DIPYDT LEI GS  FI +AW+ KC Y
Sbjct: 992  ILGKLYRQVKD-----VCDAEGEVSAGLEVVPKDIPYDTTLEILGSTTFIDDAWNSKCSY 1046

Query: 656  DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 477
            DGQLN LL Q+ V  EEEVVTGH+WSMPKY+ +           AYN++++EF+ VF+ +
Sbjct: 1047 DGQLNGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERM 1106

Query: 476  GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 297
              D   L + EKN +YE+KASAWYQVTYHP WV +S+EL+  D   +T MLSFAW+ A+Y
Sbjct: 1107 EPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQIPDAVSSTVMLSFAWIAADY 1166

Query: 296  LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            L RIKIR R + + D  KPINSL  YL  KI
Sbjct: 1167 LARIKIRHRGLPYSDSTKPINSLGRYLADKI 1197


>emb|CBI21038.3| unnamed protein product [Vitis vinifera]
          Length = 1035

 Score =  413 bits (1062), Expect = e-113
 Identities = 197/330 (59%), Positives = 246/330 (74%), Gaps = 1/330 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTW+E L+PPSK+SW PM Y   E + L R +   DI+DFF KNMVNE LG ICN+HVVH
Sbjct: 709  VTWEETLIPPSKQSWPPMQYDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVH 768

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            AD S+YGA+DE C+ LAE AATAVDFPKTGK+V +P  LKPKMYPDFMGKE+F +Y+S K
Sbjct: 769  ADRSEYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNK 828

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG++YR+IKD+ +  V +S +    +F  D +P+D DL IPGSADFI +AW  KC YDG
Sbjct: 829  ILGKMYRQIKDAYNEDVSESSEQ---IFGADKVPFDEDLGIPGSADFINDAWIHKCSYDG 885

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QLN LL Q+ VK EEEVVTGHVWSMPKY +R           AY+S+K+EF+++F+ +  
Sbjct: 886  QLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNS 945

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVA-TPMLSFAWVPAEYL 294
            D   LT+ EKN +YEQKASAWYQVTYHP WVKKS+EL+N D+      MLSFAW+ A+YL
Sbjct: 946  DFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYL 1005

Query: 293  VRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
             RIKIRR+   ++D  KPINSLA +LV +I
Sbjct: 1006 ARIKIRRKGTGNVDSSKPINSLARFLVDRI 1035


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  413 bits (1062), Expect = e-113
 Identities = 200/331 (60%), Positives = 251/331 (75%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SWIPM+Y P E+++L R +N  DI+DFF KNMV E LG ICN+HVVH
Sbjct: 872  VTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKSKK
Sbjct: 932  ADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKCLY 657
            +LG+LYR++KD     V D++ +  A  +V   DIPYDT L IPGS  FI +AW+ KC Y
Sbjct: 992  ILGKLYRQVKD-----VCDAEGEVSAGLEVVPKDIPYDTTLVIPGSTVFIDDAWNSKCSY 1046

Query: 656  DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 477
            DGQL+ LL Q+ V  EEEVVTGH+WSMPKY+ +           AYN++++EF+ VF+ +
Sbjct: 1047 DGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERM 1106

Query: 476  GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 297
              D   L + EKN +YE+KASAWYQVTY+P WV +S+EL+  D   +T MLSFAW+ A+Y
Sbjct: 1107 DPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAISSTVMLSFAWIAADY 1166

Query: 296  LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            L RIKIR R +++ D  KPINSL  YLV KI
Sbjct: 1167 LARIKIRHRGLQYSDSTKPINSLGRYLVDKI 1197


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score =  413 bits (1062), Expect = e-113
 Identities = 197/330 (59%), Positives = 246/330 (74%), Gaps = 1/330 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTW+E L+PPSK+SW PM Y   E + L R +   DI+DFF KNMVNE LG ICN+HVVH
Sbjct: 871  VTWEETLIPPSKQSWPPMQYDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVH 930

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            AD S+YGA+DE C+ LAE AATAVDFPKTGK+V +P  LKPKMYPDFMGKE+F +Y+S K
Sbjct: 931  ADRSEYGALDEACLDLAERAATAVDFPKTGKLVTLPPYLKPKMYPDFMGKEEFQTYRSNK 990

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG++YR+IKD+ +  V +S +    +F  D +P+D DL IPGSADFI +AW  KC YDG
Sbjct: 991  ILGKMYRQIKDAYNEDVSESSEQ---IFGADKVPFDEDLGIPGSADFINDAWIHKCSYDG 1047

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QLN LL Q+ VK EEEVVTGHVWSMPKY +R           AY+S+K+EF+++F+ +  
Sbjct: 1048 QLNGLLGQYKVKREEEVVTGHVWSMPKYKSRKQGELTERLKHAYSSLKKEFRQIFEKMNS 1107

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVA-TPMLSFAWVPAEYL 294
            D   LT+ EKN +YEQKASAWYQVTYHP WVKKS+EL+N D+      MLSFAW+ A+YL
Sbjct: 1108 DFDQLTDDEKNRLYEQKASAWYQVTYHPTWVKKSLELQNPDEVFGERVMLSFAWITADYL 1167

Query: 293  VRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
             RIKIRR+   ++D  KPINSLA +LV +I
Sbjct: 1168 ARIKIRRKGTGNVDSSKPINSLARFLVDRI 1197


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score =  412 bits (1059), Expect = e-112
 Identities = 197/331 (59%), Positives = 252/331 (76%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SWIPM+Y P E++++ R +N  DI+DFF KNMV E LG ICN+HVVH
Sbjct: 872  VTWDENLIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKSKK
Sbjct: 932  ADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKCLY 657
            +LG+LYR++KD     V D++ +  A  ++  +DIPYD+ LEIPGS  FI +AW+ KC Y
Sbjct: 992  ILGKLYRQVKD-----VCDTEGEVSAGLELVPNDIPYDSSLEIPGSTAFIDDAWNSKCSY 1046

Query: 656  DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 477
            DGQL+ LL Q+ V  EEEVVTGH+WSMPKY+ +           AYN++++EF+ VF+ +
Sbjct: 1047 DGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERM 1106

Query: 476  GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 297
              D   L + EKN +YE+KASAWYQVTY+P WV +S+EL+  D   +T MLSFAW+ A+Y
Sbjct: 1107 EPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADY 1166

Query: 296  LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            L RIKIR R +++ D  KPINSL  YLV  I
Sbjct: 1167 LARIKIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score =  411 bits (1057), Expect = e-112
 Identities = 192/329 (58%), Positives = 247/329 (75%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTW++ L+PP K+SW PM Y PGE +++QR +N  DI+DFF KNMVNE LGTICN+HVVH
Sbjct: 872  VTWEDLLIPPGKKSWPPMQYDPGETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS+YGA+DEKCI LAELAATAVDFPKTGK+V+MP  LKPK+YPDFMGKE++ SYKS+K
Sbjct: 932  ADLSEYGALDEKCIHLAELAATAVDFPKTGKIVSMPANLKPKLYPDFMGKEEYQSYKSRK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG LYR IKD  D  + +S +  L      DI YDTDLE+ GSAD+I +AW +KC YD 
Sbjct: 992  ILGRLYRHIKDVYDEDLSESSEINL---DSPDINYDTDLEVTGSADYIDDAWVKKCSYDR 1048

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QL  LL Q+ VK EEEVVTGH+WSMPKY +R           +Y ++++EF+++F+++  
Sbjct: 1049 QLIGLLGQYKVKREEEVVTGHIWSMPKYTSRKLGDLKEKLGHSYGALRKEFRQIFESMDS 1108

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 291
            + + L E E+N +YE+KASAWYQVTYHP+WV+K +EL+ SD      MLSFAW+ A+YL 
Sbjct: 1109 EIEQLNEDERNELYERKASAWYQVTYHPKWVEKKLELQKSDGADPVVMLSFAWIAADYLA 1168

Query: 290  RIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            RIKIR +   ++D  KP+NSL  YL  KI
Sbjct: 1169 RIKIRSQGTGNVDFSKPVNSLVKYLADKI 1197


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score =  410 bits (1055), Expect = e-112
 Identities = 199/331 (60%), Positives = 249/331 (75%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SWIPM+Y P E+++L R +N  DI+DFF KNMV E LG ICN+HVVH
Sbjct: 872  VTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKSKK
Sbjct: 932  ADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKCLY 657
            +LG+LYR++KD     V D++ +  A  +V   DIPYD+ LEI GS  FI +AW+ KC Y
Sbjct: 992  ILGKLYRQVKD-----VCDAEGEVSAGLEVVPKDIPYDSTLEILGSTAFIDDAWNSKCSY 1046

Query: 656  DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 477
            DGQL+ LL Q+ V  EEEVVTGH+WSMPKY+ +           AYN++++EF+ VF+ +
Sbjct: 1047 DGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFERM 1106

Query: 476  GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 297
              D   L + EKN +YE+KASAWYQVTYHP WV +S+EL+  D    T MLSFAW+ A+Y
Sbjct: 1107 DPDFDLLPDDEKNDMYERKASAWYQVTYHPHWVARSLELQLPDAVSNTVMLSFAWIAADY 1166

Query: 296  LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            L RIKIR R +++ D  KPINSL  YLV  I
Sbjct: 1167 LARIKIRHRRLQYSDSTKPINSLGRYLVDNI 1197


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score =  408 bits (1049), Expect = e-111
 Identities = 196/331 (59%), Positives = 250/331 (75%), Gaps = 2/331 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SWIPM+Y P E+++L R +N  DI+DFF KNMV E LG ICN+HVVH
Sbjct: 872  VTWDENLIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE+F SYKSKK
Sbjct: 932  ADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEEFQSYKSKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQV--DDIPYDTDLEIPGSADFIREAWDRKCLY 657
            +LG+LYR++KD     V D++ +  A  ++  +DIPYD+ LEIPGS  F+ +AW+ KC Y
Sbjct: 992  ILGKLYRQVKD-----VCDTEGEVSAGLELVPNDIPYDSSLEIPGSTVFMGDAWNCKCSY 1046

Query: 656  DGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNL 477
            DGQL+ LL Q+ V  EEEVVTGH+WSMPKY+ +           AYN +++EF+ VF+ +
Sbjct: 1047 DGQLHGLLGQYKVNREEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFERM 1106

Query: 476  GEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEY 297
              D   L + EKN +YE+KASAWYQVTY+P WV +S+EL+  D   +T MLSFAW+ A+Y
Sbjct: 1107 DPDFDLLPDDEKNDMYERKASAWYQVTYNPHWVARSLELQLPDAVSSTVMLSFAWIAADY 1166

Query: 296  LVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            L RI IR R +++ D  KPINSL  YLV  I
Sbjct: 1167 LARINIRHRGLQYSDSTKPINSLGRYLVDNI 1197


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score =  407 bits (1045), Expect = e-111
 Identities = 191/333 (57%), Positives = 249/333 (74%), Gaps = 4/333 (1%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SW PM+Y+  E + L R ++Q DI++FF K+MVNE LGTICN+HVVH
Sbjct: 872  VTWDENLIPPSKKSWPPMEYNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            AD S+YGA+DE CI LAELAATAVDFPKTGK+V MP  LKPK+YPDFMGKE + SYKS K
Sbjct: 932  ADHSEYGALDENCILLAELAATAVDFPKTGKIVTMPAHLKPKLYPDFMGKEAYQSYKSNK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVD----DIPYDTDLEIPGSADFIREAWDRKC 663
            +LG LYR+ KD+        D+D     +VD    DI YDTDLE+P S DFI +AW++KC
Sbjct: 992  ILGRLYRQSKDA-------YDEDISVSSEVDINPVDIHYDTDLEVPESVDFIADAWNQKC 1044

Query: 662  LYDGQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFD 483
             YDGQLN LLEQ+ V  EEE+VTGH+WSMPKYN+R           +Y+++++EF++VF+
Sbjct: 1045 SYDGQLNGLLEQYKVNREEELVTGHIWSMPKYNSRKQGELKERLKHSYSALRKEFRQVFE 1104

Query: 482  NLGEDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPA 303
             +  D + L+E EKN ++E+KASAWYQVTYHP WVKKS++L+  D   +  +LSFAW+  
Sbjct: 1105 KMDSDCELLSEDEKNALFERKASAWYQVTYHPEWVKKSLDLQEQDSARSVVLLSFAWIAN 1164

Query: 302  EYLVRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            +YL RIKIR R++ ++D  KP+N LA Y+  +I
Sbjct: 1165 DYLARIKIRCREMANIDTSKPVNYLARYVADRI 1197


>ref|XP_003526410.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Glycine
            max] gi|571459266|ref|XP_006581359.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Glycine
            max]
          Length = 1204

 Score =  405 bits (1040), Expect = e-110
 Identities = 201/334 (60%), Positives = 245/334 (73%), Gaps = 9/334 (2%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSKRSWIPM+Y+P E +   R +   DI++FFV+NMVNE LG ICN+HVVH
Sbjct: 871  VTWDENLIPPSKRSWIPMEYAPQESKLKTRQVMTRDIIEFFVRNMVNEHLGAICNAHVVH 930

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            AD SDYGA+DEKCI LAELAATAVDFPKTGK+V MP  LKPK+YPDFMGKE   SY+SKK
Sbjct: 931  ADSSDYGALDEKCIHLAELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKERHQSYRSKK 990

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG LYR+IKD+ D    D D   L  F   DIPYD DLE+PGSADFI +AW++KC YDG
Sbjct: 991  ILGRLYRRIKDAYD---EDIDAPYLN-FVTGDIPYDKDLEVPGSADFIADAWEQKCSYDG 1046

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QL+ LL Q+ VK EEEVVTG +WSMPKYN+R           +Y+++K+EF+  F+ L  
Sbjct: 1047 QLSGLLGQYKVKREEEVVTGQIWSMPKYNSRKQGELKERLKHSYSALKKEFRHTFEKLNS 1106

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRN-------SDDKVATPMLSFAW 312
            D   L+E EKN  YEQKASAWYQVTYHP WVKKS++L++       +D   +T MLSF W
Sbjct: 1107 DVGELSEEEKNLFYEQKASAWYQVTYHPEWVKKSLDLQDKSSENQEADSLGSTVMLSFPW 1166

Query: 311  VPAEYLVRIKIRRRDVR--HLDMEKPINSLAGYL 216
            +  +YL R KIR+R  R  + D  KP++SLA YL
Sbjct: 1167 IAVDYLARTKIRQRHQRCGNFDSTKPVDSLAKYL 1200


>ref|NP_001266205.1| RNA-dependent RNA polymerase 6 [Solanum lycopersicum]
            gi|397529811|gb|AFO53516.1| RNA-dependent RNA polymerase
            6 [Solanum lycopersicum]
          Length = 1197

 Score =  403 bits (1035), Expect = e-110
 Identities = 194/329 (58%), Positives = 244/329 (74%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SW+PM Y+P E ++L R +  +DI+DFF+KNMV E LG ICN+HVVH
Sbjct: 872  VTWDENLIPPSKKSWMPMAYAPAEAKQLGRQVQHTDIIDFFLKNMVQESLGEICNAHVVH 931

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GAMDEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE F SY+SKK
Sbjct: 932  ADLSEFGAMDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQSYESKK 991

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG+LYR++ D  D   G+S       +   DIPYDT+LEIPG  DFI +AW+ KC YDG
Sbjct: 992  ILGKLYRQVIDVYDAEGGESSG---LEYVPKDIPYDTNLEIPGYEDFIDDAWNHKCSYDG 1048

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QLN LL Q+ V  EEEVVTGH+WSMPKY+ +           AYN +++EF+ VF+ +  
Sbjct: 1049 QLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNMLRKEFRNVFEQMEP 1108

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 291
            D   L   EKN +YE+KA AWY+VTYHP WV +S+EL+  D      MLSFAW+ A+Y+ 
Sbjct: 1109 DFDLLPIDEKNDMYERKAFAWYRVTYHPHWVTRSLELQLPDAVSNGVMLSFAWIAADYIA 1168

Query: 290  RIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            RIKIR+R +++ D  KPI+SL  YLV KI
Sbjct: 1169 RIKIRQRGMQNFDSTKPIDSLGRYLVNKI 1197


>gb|EYU20269.1| hypothetical protein MIMGU_mgv1a000386mg [Mimulus guttatus]
          Length = 1196

 Score =  402 bits (1033), Expect = e-109
 Identities = 194/330 (58%), Positives = 253/330 (76%), Gaps = 1/330 (0%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSKRSW PM+Y+PGE+++L R +  +DI++FF KNMVNE LG ICN+HVVH
Sbjct: 873  VTWDENLMPPSKRSWTPMEYAPGEVKQLPREVKHTDIIEFFTKNMVNESLGAICNAHVVH 932

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            AD S+YGA+DEKCIKLAELAA AVDFPKTGK+V MP ELKPK+YPDFMGK++F +YKS K
Sbjct: 933  ADSSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMPAELKPKLYPDFMGKDEFQTYKSSK 992

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG+LYRKIKDS +    +S ++T       +I YD +LEI GS  FI +AW+ KC YDG
Sbjct: 993  ILGKLYRKIKDS-NYDYEESSENTSV-----NIAYDQELEIAGSESFITDAWNCKCSYDG 1046

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QL  LL Q+ V SEEEVVTGH+WSMPKY+++           AY++++++F++VF+++  
Sbjct: 1047 QLTGLLGQYKVNSEEEVVTGHIWSMPKYSSKKQGELKERLKHAYSTLRKDFRKVFESMDA 1106

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVA-TPMLSFAWVPAEYL 294
            +   L++ EKNT++E+KASAWYQVTY+  WVKKS +L+  DD+V  T MLSFAW+ A+YL
Sbjct: 1107 EFDQLSDDEKNTMFERKASAWYQVTYNESWVKKSKDLQVVDDEVGKTVMLSFAWIAADYL 1166

Query: 293  VRIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
             RIKIRRR + +    KPI+SL  YL  KI
Sbjct: 1167 ARIKIRRRRMENAISMKPIDSLGRYLADKI 1196


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score =  402 bits (1033), Expect = e-109
 Identities = 191/326 (58%), Positives = 243/326 (74%), Gaps = 2/326 (0%)
 Frame = -2

Query: 1187 TWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHA 1008
            TWD NL+PPSK+SW PM+Y+P E++ LQR I + DI++FF KNM+NE LGTICN+HVVHA
Sbjct: 872  TWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHA 931

Query: 1007 DLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKV 828
            D S +GA+DE CI+L+ELAATAVDFPKTGK+V MP  LKPK+YPDFMGKE   SYKS K+
Sbjct: 932  DRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKI 991

Query: 827  LGELYRKIKDSPDLVVGDSDKDTLAV--FQVDDIPYDTDLEIPGSADFIREAWDRKCLYD 654
            LG++YR+I+D+ D    D D  T     F   D+ YD DLE+ G+ DFI EAWD+KC YD
Sbjct: 992  LGKMYRRIRDAYD----DDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYD 1047

Query: 653  GQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLG 474
            GQL+ LL Q+ V  EEE+VTGH+WSMPKY +R           +Y+++K++F++VF+NLG
Sbjct: 1048 GQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLG 1107

Query: 473  EDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYL 294
             + + LT  E+N +YE+KASAWYQV YHP W+KKS+ELR  D   A PMLSF W+ A+YL
Sbjct: 1108 PEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYL 1167

Query: 293  VRIKIRRRDVRHLDMEKPINSLAGYL 216
             RIKI+ R  +  D  KPINSLA YL
Sbjct: 1168 ARIKIKCRRTKSFDPTKPINSLASYL 1193


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score =  402 bits (1033), Expect = e-109
 Identities = 191/326 (58%), Positives = 243/326 (74%), Gaps = 2/326 (0%)
 Frame = -2

Query: 1187 TWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVHA 1008
            TWD NL+PPSK+SW PM+Y+P E++ LQR I + DI++FF KNM+NE LGTICN+HVVHA
Sbjct: 872  TWDGNLIPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHA 931

Query: 1007 DLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKKV 828
            D S +GA+DE CI+L+ELAATAVDFPKTGK+V MP  LKPK+YPDFMGKE   SYKS K+
Sbjct: 932  DRSKHGALDENCIQLSELAATAVDFPKTGKLVTMPPHLKPKLYPDFMGKEATQSYKSTKI 991

Query: 827  LGELYRKIKDSPDLVVGDSDKDTLAV--FQVDDIPYDTDLEIPGSADFIREAWDRKCLYD 654
            LG++YR+I+D+ D    D D  T     F   D+ YD DLE+ G+ DFI EAWD+KC YD
Sbjct: 992  LGKMYRRIRDAYD----DDDMITSRELNFTPGDVHYDVDLEVAGAEDFIAEAWDQKCSYD 1047

Query: 653  GQLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLG 474
            GQL+ LL Q+ V  EEE+VTGH+WSMPKY +R           +Y+++K++F++VF+NLG
Sbjct: 1048 GQLSGLLGQYKVNREEEIVTGHIWSMPKYVSRKQGELKEKLKHSYSTLKKDFRQVFENLG 1107

Query: 473  EDSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYL 294
             + + LT  E+N +YE+KASAWYQV YHP W+KKS+ELR  D   A PMLSF W+ A+YL
Sbjct: 1108 PEFEQLTCDERNALYEKKASAWYQVAYHPTWLKKSLELREPDAPEAVPMLSFPWIAADYL 1167

Query: 293  VRIKIRRRDVRHLDMEKPINSLAGYL 216
             RIKI+ R  +  D  KPINSLA YL
Sbjct: 1168 ARIKIKCRRTKSFDPTKPINSLASYL 1193


>gb|AHL27586.1| RNA-dependent RNA polymerase 3 [Salvia miltiorrhiza]
          Length = 1195

 Score =  402 bits (1032), Expect = e-109
 Identities = 191/329 (58%), Positives = 243/329 (73%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWD+ L+PPSKRSW+PMDY PGE++   R +  SDI++FF KNMVNE LGTICN+HVVH
Sbjct: 871  VTWDDTLIPPSKRSWLPMDYEPGEVKLKPREVTHSDIIEFFTKNMVNESLGTICNAHVVH 930

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS+YGA+DEKCIKLAELAA AVDFPKTGK+V MP +LKP+MYPDFMGKE+  SYKS K
Sbjct: 931  ADLSEYGALDEKCIKLAELAAIAVDFPKTGKIVTMPPDLKPQMYPDFMGKEELQSYKSTK 990

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG+LYR+++D+ +L    S + T       DI YD +LE+ GS DFI +AW  KC YDG
Sbjct: 991  ILGKLYRRVRDAYNLDYEASSQLTYPA----DISYDQELEVTGSKDFIADAWSCKCSYDG 1046

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QL  LL Q+ V SE+EVVTGH+WSMPK++++           AYN++++++++VF+ +  
Sbjct: 1047 QLAGLLGQYKVNSEDEVVTGHIWSMPKFSSKKQGELKERLKHAYNALRKDYRKVFECMAP 1106

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 291
                L + EKN +YEQKASAWYQVTY   WVKKS EL+  DD   T +LSFAW+ A+YL 
Sbjct: 1107 GFDQLPDHEKNVLYEQKASAWYQVTYQDNWVKKSKELQELDDSGKTVLLSFAWIAADYLA 1166

Query: 290  RIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            RIKIRRR + +    KPI+SL  YL  KI
Sbjct: 1167 RIKIRRRRMENAISGKPIDSLGRYLADKI 1195


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score =  402 bits (1032), Expect = e-109
 Identities = 193/329 (58%), Positives = 244/329 (74%)
 Frame = -2

Query: 1190 VTWDENLVPPSKRSWIPMDYSPGEIQKLQRAINQSDIVDFFVKNMVNEKLGTICNSHVVH 1011
            VTWDENL+PPSK+SW+PMDY+P E ++L R +  +DI+DFF KNMV E LG ICN+HVVH
Sbjct: 873  VTWDENLIPPSKKSWMPMDYAPAEAKQLGRQVQHTDIIDFFSKNMVQESLGEICNAHVVH 932

Query: 1010 ADLSDYGAMDEKCIKLAELAATAVDFPKTGKVVAMPQELKPKMYPDFMGKEDFISYKSKK 831
            ADLS++GA+DEKC+KLAELAA AVDFPKTGK+V MP +LKPKMYPDFMGKE F +Y+SKK
Sbjct: 933  ADLSEFGALDEKCLKLAELAALAVDFPKTGKLVTMPFDLKPKMYPDFMGKEPFQTYESKK 992

Query: 830  VLGELYRKIKDSPDLVVGDSDKDTLAVFQVDDIPYDTDLEIPGSADFIREAWDRKCLYDG 651
            +LG+LYR++ D  D   G+S       F   DIPYDT++EI G  DFI +AW+ KC YDG
Sbjct: 993  ILGKLYRQVIDVYDAEGGESSG---LEFVPKDIPYDTNIEILGYEDFIDDAWNHKCSYDG 1049

Query: 650  QLNALLEQFNVKSEEEVVTGHVWSMPKYNNRXXXXXXXXXXLAYNSVKREFKRVFDNLGE 471
            QLN LL Q+ V  EEEVVTGH+WSMPKY+ +           AYN++++EF+ VF+ +  
Sbjct: 1050 QLNGLLGQYKVNGEEEVVTGHIWSMPKYSAKKQGELKERLKHAYNTLRKEFRNVFEQMEP 1109

Query: 470  DSQNLTEAEKNTIYEQKASAWYQVTYHPRWVKKSVELRNSDDKVATPMLSFAWVPAEYLV 291
            D   L   EKN +YE+KASAWY+VTYHP WV +S+EL+  D      MLSFAW+ A+Y+ 
Sbjct: 1110 DFDMLPVDEKNDMYERKASAWYRVTYHPHWVTRSLELQLPDAVSNGVMLSFAWIAADYIA 1169

Query: 290  RIKIRRRDVRHLDMEKPINSLAGYLVGKI 204
            RIKIR+R +++ D  KPIN L  YLV KI
Sbjct: 1170 RIKIRQRGMQNSDSTKPINFLGRYLVNKI 1198