BLASTX nr result
ID: Papaver25_contig00010805
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00010805
(2554 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobrom... 825 0.0
ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobrom... 811 0.0
ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [The... 708 0.0
emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera] 660 0.0
ref|XP_007200213.1| hypothetical protein PRUPE_ppa015697mg [Prun... 572 e-160
gb|ADP20179.1| gag-pol polyprotein [Silene latifolia] 562 e-157
ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prun... 560 e-157
emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera] 558 e-156
gb|ADP20178.1| gag-pol polyprotein [Silene latifolia] 552 e-154
ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prun... 551 e-154
ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prun... 543 e-151
ref|XP_007049887.1| DNA/RNA polymerases superfamily protein [The... 541 e-151
gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group] 508 e-141
gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum] 501 e-139
gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japoni... 489 e-135
gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Ja... 489 e-135
gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sa... 481 e-133
dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group] 481 e-133
gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sati... 480 e-132
gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-... 480 e-132
>ref|XP_007010495.1| Uncharacterized protein TCM_044370 [Theobroma cacao]
gi|508727408|gb|EOY19305.1| Uncharacterized protein
TCM_044370 [Theobroma cacao]
Length = 1306
Score = 825 bits (2131), Expect = 0.0
Identities = 421/676 (62%), Positives = 499/676 (73%), Gaps = 6/676 (0%)
Frame = +2
Query: 545 EDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEH 724
E+YLDWEASLE+YFEWK M E RKVLFVKLKLKG ALQW KRVEEQRARQ+K KI TWEH
Sbjct: 51 EEYLDWEASLENYFEWKPMAENRKVLFVKLKLKGTALQWLKRVEEQRARQSKLKISTWEH 110
Query: 725 MKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYL 904
MKSKLRKQFL ADY MELYE+ H LKQ +TVEEY SEF NL IRVGL E+NEQ+TSRYL
Sbjct: 111 MKSKLRKQFLPADYTMELYEKFHCLKQNNMTVEEYISEFNNLSIRVGLAESNEQITSRYL 170
Query: 905 SGLNQSIRDEMGVVRLFTLEDARQYALMAEKRLSRPNMRRNITSRTSATSPRNNAAVRSD 1084
+GLN IRDEMGVVRL+ +EDARQYAL AEKR+ R R+ + T +NN+ R
Sbjct: 171 AGLNHFIRDEMGVVRLYNIEDARQYALSAEKRILRYGARKPLYG----THWQNNSEARRG 226
Query: 1085 MRSSTTDKFEKGRNSRFQPQSNNGAGSSKSNTG---SQARCYTCGDSGHMSYACPERRVN 1255
+S Q A +K+N G S RC+TCG++GH S+A P+RRVN
Sbjct: 227 YPTS-------------QQNYQGAATINKTNRGGSNSHIRCFTCGENGHTSFAGPQRRVN 273
Query: 1256 FTXXXXXXXXXXPXXXXXXXXXXXXLPVKGDCLVLQRILAAP-NVEKEDLRRLSVFRTRV 1432
P +G+ LV++R++ N E ED +R S+FRTRV
Sbjct: 274 LAELREELEPVYDEYEEIEEIDVY--PAQGESLVVRRVMTTTVNEEAEDWKRRSIFRTRV 331
Query: 1433 FCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKF 1612
C KVC++++DGGS NIISKEAV KLKLPT KHP PYK+ W++K VPVT + LVKF
Sbjct: 332 VCEGKVCDLVIDGGSMENIISKEAVNKLKLPTNKHPYPYKIGWLKKGHEVPVTTQYLVKF 391
Query: 1613 TMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHPLQEE 1792
TM ++++DEA CDV PMDV HIL+GRPWLYD DMVH T+ NTY+F D +++T +PL+EE
Sbjct: 392 TMGDNLDDEALCDVVPMDVGHILVGRPWLYDHDMVHKTEPNTYSFYNDNKRYTSYPLKEE 451
Query: 1793 VDNS--HKNNKERGVLTAQKFEEESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQLLIK 1966
S K NK G L+ + FE E + GI+Y LV + + + G+ +P EIQQLL +
Sbjct: 452 TKKSANSKINKITGYLSVENFEAEGSEMGIMYALVTKHLKSDQMGKSPQYPTEIQQLLKE 511
Query: 1967 FKDLVADELPKGLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLV 2146
F +L ++LPK LPP+RSIQH IDLVPG++LPNLPAYRMPP R E+QRQVEEL++KGLV
Sbjct: 512 FGELFNEDLPKSLPPLRSIQHAIDLVPGAALPNLPAYRMPPMQRVEVQRQVEELLEKGLV 571
Query: 2147 RASKSPCAVPALLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKL 2326
R SKSPCA PALL PKKDGSWRMCVDSRAINKIT+KYRFPIPRLD+MLD LVGS+ FSK+
Sbjct: 572 RESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKI 631
Query: 2327 DLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFV 2506
DL+S YHQIRMR GDEWKTAFKTPDGL+EWLVMPFGLSNAPSTFMRVM EVLKPFL FV
Sbjct: 632 DLKSEYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFV 691
Query: 2507 VVYFDDILIFSQTREK 2554
VVYFDDILI+S T+EK
Sbjct: 692 VVYFDDILIYSHTKEK 707
>ref|XP_007019474.1| Uncharacterized protein TCM_035549 [Theobroma cacao]
gi|508724802|gb|EOY16699.1| Uncharacterized protein
TCM_035549 [Theobroma cacao]
Length = 1392
Score = 811 bits (2096), Expect = 0.0
Identities = 434/769 (56%), Positives = 527/769 (68%), Gaps = 25/769 (3%)
Frame = +2
Query: 257 QQAELAELRRMIQDLSRTVRAIQRHERAGAEMEIPDGNRVHHXXXXXXXXXXXXXXXXNP 436
QQAELAE+RRMI DL+R V+A+QR E A ME P+G+ H+ NP
Sbjct: 15 QQAELAEMRRMIDDLTRAVQALQRQEPVEARMENPEGD--HNPLEIHDLEDDDEFENENP 72
Query: 437 FH-----NQAR--GLEARLVQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWK 595
FH NQA GLE RL+ ALDL+GGGI++EV DF K HAE+YLDWEASLE+YFEWK
Sbjct: 73 FHEDGPANQAARVGLEGRLLHALDLNGGGIRIEVTDFHEKFHAEEYLDWEASLENYFEWK 132
Query: 596 TMTEERKVLFVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAME 775
M E RKVLFVKLKLKG ALQW KRVEEQRARQ K KI TWEHMKSKLRKQFL ADY ME
Sbjct: 133 PMAENRKVLFVKLKLKGTALQWRKRVEEQRARQGKLKISTWEHMKSKLRKQFLPADYTME 192
Query: 776 LYERLHNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGVVRLF 955
LYE+ H LKQ +TVEEYTSEF NL IRVGL E+NEQ TSRYL+GLN SIRDEMGVVRL+
Sbjct: 193 LYEKFHCLKQNNMTVEEYTSEFNNLSIRVGLVESNEQNTSRYLAGLNHSIRDEMGVVRLY 252
Query: 956 TLEDARQYALMAEKRLSRPNMRR---------NITSR----TSATSPRNNAAVRSDMRSS 1096
+EDARQYAL AEKR+ R R+ N +R TS + + A + R +
Sbjct: 253 NIEDARQYALSAEKRVLRYGARKPLYGTHWQNNSEARRGYPTSQQNYQGAATINKTNRGA 312
Query: 1097 TT-DKFEKGRNSR-FQPQSNNGAGSSKSNTGSQARCYTCGDSGHMSYACPERRVNFTXXX 1270
T +K +KG+ + Q+++G+ ++K + S RC+TCG+ GH S+ACP+RRVN
Sbjct: 313 TNFEKNDKGKGIMPYGGQNSSGSSTNKGGSNSHIRCFTCGEKGHTSFACPQRRVNLAKLA 372
Query: 1271 XXXXXXXPXXXXXXXXXXXXLPVKGDCLVLQRILAAP-NVEKEDLRRLSVFRTRVFCGKK 1447
P + D LV++R++ N E ED +R
Sbjct: 373 EELEPVYDEYEEEVEEIDVY-PAQRDSLVVRRVMTTTVNEEAEDWKR------------- 418
Query: 1448 VCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSND 1627
+ KLKLPT +HP PYK+ W++KE VPVT +CLVKFTM ++
Sbjct: 419 ------------------RMNKLKLPTNRHPYPYKIGWLKKEHEVPVTTQCLVKFTMGDN 460
Query: 1628 VEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHPLQEEVDNSH 1807
++DEA CDV PMDV HIL+GRPWLYD DMVH TK NTY+F K+ +++TL+PL+EE S
Sbjct: 461 LDDEALCDVVPMDVGHILVGRPWLYDHDMVHKTKPNTYSFYKNNKRYTLYPLREETKKSA 520
Query: 1808 KN--NKERGVLTAQKFEEESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLV 1981
N +K G L+A+ FE E + GI+Y LV + + + + +P EIQQLL +F +L
Sbjct: 521 NNKISKITGYLSAENFEAEGSEMGIMYALVTKHLKSDQMSKSPQYPTEIQQLLKEFGELF 580
Query: 1982 ADELPKGLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKS 2161
++LPK LP +RSIQH IDLVPG++LPNLPAY+MPP R E+QRQVEEL++KGLVR SKS
Sbjct: 581 NEDLPKSLPHLRSIQHAIDLVPGAALPNLPAYKMPPMQRTEVQRQVEELLEKGLVRESKS 640
Query: 2162 PCAVPALLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSG 2341
PCA PALL PKKDGSWRMCVDSRAINKIT+K RFPIPRLD+MLD LVGS+ FSK+DL+SG
Sbjct: 641 PCACPALLAPKKDGSWRMCVDSRAINKITIKSRFPIPRLDEMLDQLVGSRVFSKIDLKSG 700
Query: 2342 YHQIRMRLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKP 2488
YHQIRMR GDE KTAFKTPDGL+EWLVMPFGLSNAPSTFM + LKP
Sbjct: 701 YHQIRMRDGDERKTAFKTPDGLFEWLVMPFGLSNAPSTFMSHGRKGLKP 749
>ref|XP_007051412.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508703673|gb|EOX95569.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 1452
Score = 708 bits (1828), Expect = 0.0
Identities = 362/615 (58%), Positives = 450/615 (73%), Gaps = 18/615 (2%)
Frame = +2
Query: 764 YAMELYERLHNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGV 943
+A++L ++Q +TVEEYTSEF NL IRVGL E+NEQ+TSRYL+GLN SIRDEMGV
Sbjct: 93 HAIDLNSGGIRIEQNNMTVEEYTSEFNNLSIRVGLAESNEQITSRYLAGLNHSIRDEMGV 152
Query: 944 VRLFTLEDARQYALMAEKRLSRPNMRR---------NITSR----TSATSPRNNAAVRSD 1084
VRL+ +EDARQYAL AEKR+ R R+ N +R TS + + A +
Sbjct: 153 VRLYNIEDARQYALSAEKRVLRYGARKPLYGTHWQNNSEARRGYPTSQQNYQGAATINKT 212
Query: 1085 MRSSTT-DKFEKGRNSR-FQPQSNNGAGSSKSNTGSQARCYTCGDSGHMSYACPERRVNF 1258
R +T +K +KG++ + Q+++G+ ++K + S RC+TCG+ GH S+ACP+R+VN
Sbjct: 213 NRGATNVEKNDKGKSIMPYGGQNSSGSSTNKRGSNSHIRCFTCGEKGHTSFACPQRKVNL 272
Query: 1259 TXXXXXXXXXXPXXXXXXXXXXXXLPVKGDCLVLQRILAAP-NVEKEDLRRLSVFRTRVF 1435
P +G+ LV++RI+ N E ED +R S+FRTRV
Sbjct: 273 AELGEELEPVYDEYKEEVEEIDVY-PAQGESLVVRRIMTTTVNEEAEDWKRRSIFRTRVV 331
Query: 1436 CGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKFT 1615
C KVC++++DGGS NIISKEAV KLKLPT KHP PYK+ W++K VPVT +CLVKFT
Sbjct: 332 CEGKVCDLVIDGGSMENIISKEAVNKLKLPTNKHPYPYKIGWLKKGHEVPVTTQCLVKFT 391
Query: 1616 MSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHPLQEEV 1795
M ++ +DEA CDV PMDV HIL+GRPWLYD DMVH TK NTY+F K+ +++TL+PL+EE
Sbjct: 392 MGDNSDDEALCDVVPMDVGHILVGRPWLYDHDMVHKTKPNTYSFYKNNKRYTLYPLREET 451
Query: 1796 DNS--HKNNKERGVLTAQKFEEESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQLLIKF 1969
S HK +K L+A+ FE E + GI+Y LV + + + + +P EIQQLL +F
Sbjct: 452 KKSANHKISKITRYLSAENFEAEGSEMGIMYALVTKHLKSDQMSKSPQYPTEIQQLLKEF 511
Query: 1970 KDLVADELPKGLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVR 2149
+L ++LPK LPP+RSIQH IDLVPG++LPNLPAYRMPP RAE+QRQVEEL +KGLVR
Sbjct: 512 GELFNEDLPKSLPPLRSIQHAIDLVPGAALPNLPAYRMPPMQRAEVQRQVEELFEKGLVR 571
Query: 2150 ASKSPCAVPALLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKLD 2329
SKSPCA PALL PKKDGSWRMCVDSRAINKIT+KYRFPIPRLD+MLD LVGS+ FSK+D
Sbjct: 572 ESKSPCACPALLAPKKDGSWRMCVDSRAINKITIKYRFPIPRLDEMLDQLVGSRVFSKID 631
Query: 2330 LRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVV 2509
L+SGYHQIRMR GDEWKTAFKTPDGL+EWLVMPFGLSNAPSTFMRVM EVLKPFL FVV
Sbjct: 632 LKSGYHQIRMRDGDEWKTAFKTPDGLFEWLVMPFGLSNAPSTFMRVMAEVLKPFLNSFVV 691
Query: 2510 VYFDDILIFSQTREK 2554
VYFDDILI+S T+EK
Sbjct: 692 VYFDDILIYSHTKEK 706
Score = 73.2 bits (178), Expect = 6e-10
Identities = 44/93 (47%), Positives = 56/93 (60%), Gaps = 7/93 (7%)
Frame = +2
Query: 257 QQAELAELRRMIQDLSRTVRAIQRHERAGAEMEIPDGNRVHHXXXXXXXXXXXXXXXXNP 436
QQAELAE+RRMI DL+R V+A+QR E A ME P+G+ H+ NP
Sbjct: 15 QQAELAEMRRMIDDLTRAVQALQRQEPVEARMENPEGD--HNPLEIHDLEDDDEFENENP 72
Query: 437 FH-----NQAR--GLEARLVQALDLSGGGIKVE 514
FH NQA GLE RL+ A+DL+ GGI++E
Sbjct: 73 FHEDGLANQAARVGLEGRLLHAIDLNSGGIRIE 105
>emb|CAN79321.1| hypothetical protein VITISV_018984 [Vitis vinifera]
Length = 1521
Score = 660 bits (1702), Expect = 0.0
Identities = 351/724 (48%), Positives = 464/724 (64%), Gaps = 21/724 (2%)
Frame = +2
Query: 443 NQARGLEARLVQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVL 622
NQ R A+L + D +++EVA+F+GK++ +LDW S+E YF+W M E RKV
Sbjct: 71 NQRR---AKLFELDDDVTKKVRLEVAEFYGKLNPTAFLDWIMSMEDYFDWYAMPENRKVR 127
Query: 623 FVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLK 802
FVK KLKGAA WW +E Q R +P I TW+ MK K+++ FL DY +Y +L +LK
Sbjct: 128 FVKAKLKGAARLWWHNIENQAHRTGQPPIDTWDEMKLKMKEHFLPTDYEQLMYTKLFSLK 187
Query: 803 QRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYA 982
Q +VEEYT EF+ L IR + E++ QL +RY +GL I+ EM +T++D Q A
Sbjct: 188 QGTKSVEEYTEEFHELSIRNQVXESDAQLAARYKAGLRMEIQLEMIAAHTYTVDDVYQLA 247
Query: 983 LMAEKRLSRPNMRRNITSRTSATSPRNNAAVRSDMRSSTTDKFEKGRNSRFQPQSN---- 1150
L E+ L R + S S R + S T+ G N+ QP SN
Sbjct: 248 LKIEEGLKFRVSRHPSSQIGSTFSNRTTSKPLSTSNFRTSIHVNGGDNT--QPTSNVAHQ 305
Query: 1151 --NGAGSSKSN----TGSQARCYTCGDSGHMSYACPERRVNFTXXXXXXXXXXPXXXXXX 1312
N +S SN + C+ CG GH + CP + ++F
Sbjct: 306 NGNKGKNSMSNGDRKVDATPLCFKCGGHGHYAVVCPTKGLHFCVEEPESELESYLKKEET 365
Query: 1313 XXXXXXLP--------VKGDCLVLQRILAAPNVE-KEDLRRLSVFRTRVFCGKKVCNVIL 1465
+G LV++ +L P V+ +ED RR+S+F+TR+ C ++C +I+
Sbjct: 366 YNEDEVSEECDYYDGMTEGHSLVVRPLLTIPKVKGEEDWRRISIFQTRISCHGRLCTMII 425
Query: 1466 DGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDEAW 1645
DGGSS NI S+E VEKL L TE+HP+P++VAW+ + +PV+ RCLV F D E+ W
Sbjct: 426 DGGSSLNIASQELVEKLNLKTERHPNPFRVAWVN-DTSIPVSFRCLVTFLFGKDFEESVW 484
Query: 1646 CDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHPLQE--EVDNSHKNNK 1819
C+V P+ V HILLGRPWL+D+ + H NTY +GRK L P++E + S++N +
Sbjct: 485 CEVLPIKVSHILLGRPWLFDRKVQHDGYENTYALIHNGRKKILRPMKEVPPIKKSNENAQ 544
Query: 1820 ERGVLTAQKFEEESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPK 1999
+ VLT +FE ESK++ +I+ L+ R V EE + ++PA +++L F DL ELP
Sbjct: 545 PKKVLTMCQFENESKETXVIFALMARKV-EEFKEQDKEYPANARKILDDFSDLWPVELPN 603
Query: 2000 GLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPA 2179
LPPMR IQH IDL+PG+SLPNLPAYRM P AE++RQV+EL+ KG +R S SPC VPA
Sbjct: 604 ELPPMRDIQHAIDLIPGASLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPCGVPA 663
Query: 2180 LLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRM 2359
LLTPKKDGSWRMCVDSRAINKIT+KYRFPIPRLDDMLDM+VGS FSK+DLRSGYHQIR+
Sbjct: 664 LLTPKKDGSWRMCVDSRAINKITIKYRFPIPRLDDMLDMMVGSVIFSKIDLRSGYHQIRI 723
Query: 2360 RLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFS 2539
R GDEWKT+FKT DGLYEWLVMPFGL+NAPSTFMR+MT+VLKPF+G+FVVVYFDDILI+S
Sbjct: 724 RPGDEWKTSFKTKDGLYEWLVMPFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYS 783
Query: 2540 QTRE 2551
++ E
Sbjct: 784 RSCE 787
>ref|XP_007200213.1| hypothetical protein PRUPE_ppa015697mg [Prunus persica]
gi|462395613|gb|EMJ01412.1| hypothetical protein
PRUPE_ppa015697mg [Prunus persica]
Length = 983
Score = 572 bits (1475), Expect = e-160
Identities = 309/560 (55%), Positives = 374/560 (66%), Gaps = 11/560 (1%)
Frame = +2
Query: 770 MELYERLHNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGVVR 949
MELYER +NLKQR ++V+EYTSEF NL +RVGLNETNE +TSRYLSGLNQ+IRDE+GVVR
Sbjct: 1 MELYERFYNLKQRDMSVQEYTSEFDNLSLRVGLNETNEHMTSRYLSGLNQTIRDELGVVR 60
Query: 950 LFTLEDARQYALMAEKRLSRPNMRRNITSRTSATSPRNNAAV---RSDMRSST------- 1099
L LEDARQYALM +++ R RR + RT RN V RS + T
Sbjct: 61 LSNLEDARQYALMVKRQQLRRGGRRFVFGRTDNYWQRNTTTVHGVRSKQGARTGGRNMVG 120
Query: 1100 TDKFEKGRNS-RFQPQSNNGAGSSKSNTGSQARCYTCGDSGHMSYACPERRVNFTXXXXX 1276
D+ EK + +F Q+ + + ++ SQ RCYTC + GH SY E
Sbjct: 121 VDRSEKWKEIVKFGSQNTAVPSNLRGDSTSQVRCYTCDEKGHTSYVRSE--------VTD 172
Query: 1277 XXXXXPXXXXXXXXXXXXLPVKGDCLVLQRILAAPNVEKEDLRRLSVFRTRVFCGKKVCN 1456
LPV+G+ LV++R++ P VE+ED R ++FRTRV CG KVCN
Sbjct: 173 FPEPTYDDFGNEEEVINLLPVEGESLVVRRVMTTPKVEEEDWRHHNIFRTRVLCGGKVCN 232
Query: 1457 VILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVED 1636
VILDGGSS NIISKEAVEKLKLP EKHP+PYKVAW K V L
Sbjct: 233 VILDGGSSENIISKEAVEKLKLPIEKHPNPYKVAWFRKGNEVYQLL-------------- 278
Query: 1637 EAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHPLQEEVDNSHKNN 1816
+ WCDV PMD CHILLGRPW +DKDM+H TKANTY F +DG+K +L PL+E V N+ K
Sbjct: 279 QVWCDVVPMDACHILLGRPWSFDKDMIHYTKANTYVFHQDGKKLSLQPLKE-VKNTPKVT 337
Query: 1817 KERGVLTAQKFEEESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELP 1996
K LT FE+ESK+ GI+Y LV + + + +F +F EIQ +L++F++LV DELP
Sbjct: 338 KVSRFLTCHNFEQESKEMGIMYALVTKEIGADQLLKFNEFSKEIQHILMEFQELVGDELP 397
Query: 1997 KGLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVP 2176
+GLP MRSIQH IDLVPG +LPNL AYRMPP RAEIQRQVE+L+ K LV
Sbjct: 398 QGLPTMRSIQHAIDLVPGVALPNLLAYRMPPTQRAEIQRQVEDLIAKRLV---------- 447
Query: 2177 ALLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIR 2356
LLTP K+ WRMCVDSR INKITVKY+FPIPRL+DMLDML GSK FSK+DLRS YHQIR
Sbjct: 448 PLLTPNKEQKWRMCVDSRVINKITVKYQFPIPRLEDMLDMLAGSKVFSKIDLRSRYHQIR 507
Query: 2357 MRLGDEWKTAFKTPDGLYEW 2416
+R GDEWK AFKTP+GLY++
Sbjct: 508 LRSGDEWKIAFKTPNGLYKY 527
>gb|ADP20179.1| gag-pol polyprotein [Silene latifolia]
Length = 1475
Score = 562 bits (1448), Expect = e-157
Identities = 292/695 (42%), Positives = 416/695 (59%), Gaps = 11/695 (1%)
Frame = +2
Query: 503 IKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEEQ 682
+KVE+ DF G ++ ED LDW ++E FE+K ++ + LKLKG A W++ ++ Q
Sbjct: 88 LKVEIPDFHGSLNPEDLLDWFRTIERVFEFKGYSDGKAFKVAILKLKGYASLWYENLKNQ 147
Query: 683 RARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIRV 862
R R K I++W +K KL ++F+ +Y +++ +L LKQ +E Y +F L ++
Sbjct: 148 RRRDGKEPIKSWLKLKKKLNEKFIPKEYTQDIFIKLTQLKQDQQPLESYLRDFEQLTLQC 207
Query: 863 GLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAEKRLSRPNMRRNITSRT 1042
LNE EQ +R++ GL+ I + + ++++ ++A AL EK T++
Sbjct: 208 ELNEKPEQKIARFVEGLDTKIAHRVRMQQVWSFDEAVNLALRVEKMGKGKATTTKPTTKP 267
Query: 1043 SATSPRNNAAVRSDMRSSTTDKFEKGRNSRFQPQSNNGAGSSKSNTGSQARCYTCGDSGH 1222
+ P + + + T +KG+ A +S+ T +CY C GH
Sbjct: 268 ATFRPPTSFKINEPPSQNKTTILDKGK----------AAETSQKKTMPLKKCYQCQGYGH 317
Query: 1223 MSYACPERR------VNFTXXXXXXXXXXPXXXXXXXXXXXXLPVKGDCLVLQRILAAPN 1384
+ CP +R V +P G LV R++
Sbjct: 318 FAKECPTKRALSSFEVVHWGDDEILVCDEEVEGTDHEEDDVVMPDAGLSLVTWRVMHTQP 377
Query: 1385 VEKEDLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWI 1564
E +R +FR+R +VCN+I+DGGS N+ S +EKL LPT+ HPSPYK+ W+
Sbjct: 378 QPLEMDQRQQIFRSRCTIKGRVCNLIIDGGSCTNVASSTLIEKLSLPTQDHPSPYKLRWL 437
Query: 1565 EKERHVPVTLRCLVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYT 1744
K V V +CLV F++ + DEA CDV PMD CH+LLGRPW +D+D VH + NTYT
Sbjct: 438 NKGAEVRVDKQCLVTFSIGKNYSDEALCDVLPMDACHLLLGRPWEFDRDSVHHGRDNTYT 497
Query: 1745 FRKDGRKFTLHPLQEEVDNSH-----KNNKERGVLTAQKFEEESKDSGIIYVLVGRSVNE 1909
F+ RK L PL + ++ + +KE ++ + +E K +Y L+ + V
Sbjct: 498 FKFRSRKVILTPLPPVLKHTTPPSMLEPSKEVLLINEAEMLQELKGDEDVYALIAKDV-- 555
Query: 1910 ELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSSLPNLPAYRMPP 2089
+ G+ P E+Q+LL ++D+ +ELP GLPP+R I+H ID +PG++LPN AYR P
Sbjct: 556 -VFGQNVSLPKEVQELLQSYEDVFPNELPSGLPPLRGIEHQIDFIPGATLPNKAAYRSDP 614
Query: 2090 KHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAINKITVKYRFPI 2269
K E+Q+Q+ EL+ KG VR S SPC+VPALL PKKDGSWRMC DSRAIN IT+KYRFPI
Sbjct: 615 KATQELQQQIGELVSKGFVRESLSPCSVPALLVPKKDGSWRMCTDSRAINNITIKYRFPI 674
Query: 2270 PRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVMPFGLSNAP 2449
PRLDD+LD L G++ FSK+DLR GYHQ+R++ GDEWKTAFKT GLYEWLVMPFGLSNAP
Sbjct: 675 PRLDDILDELSGAQLFSKIDLRQGYHQVRIKEGDEWKTAFKTKHGLYEWLVMPFGLSNAP 734
Query: 2450 STFMRVMTEVLKPFLGKFVVVYFDDILIFSQTREK 2554
STFMR+MTEVL+P+LG+FVVVYFDDIL++S ++E+
Sbjct: 735 STFMRLMTEVLRPYLGRFVVVYFDDILVYSPSKEE 769
>ref|XP_007210190.1| hypothetical protein PRUPE_ppa017790mg [Prunus persica]
gi|462405925|gb|EMJ11389.1| hypothetical protein
PRUPE_ppa017790mg [Prunus persica]
Length = 1485
Score = 560 bits (1444), Expect = e-157
Identities = 309/703 (43%), Positives = 408/703 (58%), Gaps = 19/703 (2%)
Frame = +2
Query: 503 IKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEEQ 682
IK E+ +F+G + ED+LDW +E +F+ + E + V V +LK A WW +++
Sbjct: 104 IKAEIPNFWGNLKIEDFLDWLVEVERFFDIMEVPEHKMVKMVAFRLKATAAVWWDQLQNL 163
Query: 683 RARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIRV 862
R RQ K ++RTW MKS + +QFL DY LY Q +V EYT EF L R
Sbjct: 164 RQRQGKQRVRTWRKMKSLMMEQFLPTDYEQILYRMYLGCAQGTHSVSEYTEEFMRLAERN 223
Query: 863 GLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAE---KRLSRPNMRRNIT 1033
L ET+ Q +RY +GL SI++++G+ ++TL++A AL AE K +PN RRN T
Sbjct: 224 HLTETDNQKVARYNNGLKISIQEKIGMQNIWTLQEAINMALKAELLEKEKRQPNFRRNTT 283
Query: 1034 SRTSATSPRNNAA-----VRSDMRSSTTDKFEKGRNSRFQPQSNNGAGSSKSNTGSQAR- 1195
+ T+ ++ A + T G+N F S+ + SQ
Sbjct: 284 EASDYTAGASSGAGDKGKAQQQSSGGMTKPTTVGQNKNFNEGSSRNYNRGQPRNQSQNLY 343
Query: 1196 -------CYTCGDSGHMSYACPE-RRVNFTXXXXXXXXXXPXXXXXXXXXXXXLP--VKG 1345
CY C GH S CPE ++ NF + ++
Sbjct: 344 AKPMTDICYRCQKPGHRSNVCPELKQANFIEEADEDEENDEVGENDYAGAEFAVEEGMEK 403
Query: 1346 DCLVLQRILAAPNVEKEDLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLP 1525
LVLQR+L AP +E+ +R S+FR+ KVC+VI+D GS N +SK+ VE L+L
Sbjct: 404 ITLVLQRVLLAP---REEGQRHSIFRSLCSIKNKVCDVIVDNGSCENFVSKKLVEYLQLS 460
Query: 1526 TEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYD 1705
TE H SPY + W++K V V C V ++ DE CDV MD CHILLGRPW +D
Sbjct: 461 TEPHVSPYSLGWVKKGPSVRVAETCRVPLSIGKHYRDEVLCDVIDMDACHILLGRPWQFD 520
Query: 1706 KDMVHLTKANTYTFRKDGRKFTLHPLQEEVDNSHKNNKERGVLTAQKFEEESKDSGIIYV 1885
D + N F + RK + Q + + LT E+E ++
Sbjct: 521 VDATFKGRDNVILFSWNNRKIAMTTTQPSKPSVEVKTRSSSFLTLISNEQELNEAV---- 576
Query: 1886 LVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSSLPN 2065
+E GE D P ++QQ+L +F++L ++ LP LPPMR IQH IDLVPG+SL N
Sbjct: 577 -------KEAEGE-GDIPQDVQQILSQFQELFSENLPNELPPMRDIQHRIDLVPGASLQN 628
Query: 2066 LPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAINKI 2245
LP YRM PK ++ Q+EEL+ KG +R S SPCAVP LL PKKD +WRMCVDSRAINKI
Sbjct: 629 LPHYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAINKI 688
Query: 2246 TVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVM 2425
TVKYRFPIPRL+DMLD+L GSK FSK+DLRSGYHQIR+R GDEWKTAFK+ DGL+EWLVM
Sbjct: 689 TVKYRFPIPRLEDMLDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLFEWLVM 748
Query: 2426 PFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQTREK 2554
PFGLSN PSTFMR+M +VL+PF+G FVVVYFDDILI+S T+E+
Sbjct: 749 PFGLSNTPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEE 791
>emb|CAN69233.1| hypothetical protein VITISV_003380 [Vitis vinifera]
Length = 1292
Score = 558 bits (1437), Expect = e-156
Identities = 314/706 (44%), Positives = 418/706 (59%), Gaps = 3/706 (0%)
Frame = +2
Query: 443 NQARGLEARLVQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVL 622
NQ R A+L + D +++EVA+F+GK++ +LDW S+E YF+W M E RKV
Sbjct: 81 NQRR---AKLFELDDDVTKKVRLEVAEFYGKLNPTTFLDWIMSMEDYFDWYAMPENRKVR 137
Query: 623 FVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLK 802
FVK KLKGAA
Sbjct: 138 FVKAKLKGAA-------------------------------------------------- 147
Query: 803 QRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYA 982
R +VEEYT EF+ L IR + E++ QL +RY G I+ EM V +T++D Q A
Sbjct: 148 -RTKSVEEYTEEFHELSIRNQVRESDAQLAARYKVGFRMEIQLEMIVAHTYTVDDVYQLA 206
Query: 983 LMAEKRLSRPNMRRNITSRTSATSPRNNAAVRSDMRSSTTDKFEKGRNSRFQPQSNNGAG 1162
L E+ L S R ++ + S + TT K N R N G
Sbjct: 207 LKIEEGLK------------FRVSKRPSSQIGSTFSNRTTSKPLSISNFRTSNHVNGGGN 254
Query: 1163 SSKSNTGSQARCYTCGDSGHMSYACPERRVNFTXXXXXXXXXXPXXXXXXXXXXXXLPVK 1342
+ +++ + +S SY E N +
Sbjct: 255 TQQTSNVAYKNGNKEPESELESYPKEEETYNEDEVSEECDYYDGM-------------TE 301
Query: 1343 GDCLVLQRILAAPNVEKE-DLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLK 1519
G LV++ +L P V++E D RR S+F+TR+ C ++C +I+DGGSS NI S+E VEKL
Sbjct: 302 GHSLVVRPLLTVPKVKREEDWRRTSIFQTRISCQGRLCTMIIDGGSSLNIASQELVEKLN 361
Query: 1520 LPTEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWL 1699
L TE+HP+P++VAW+ + +PV+ RCLV F D E+ WC+V P+ V HILLGRPWL
Sbjct: 362 LKTERHPNPFRVAWVN-DTSIPVSFRCLVTFLFGKDFEESVWCEVLPIKVSHILLGRPWL 420
Query: 1700 YDKDMVHLTKANTYTFRKDGRKFTLHPLQE--EVDNSHKNNKERGVLTAQKFEEESKDSG 1873
+D+ + H NTY +G K L P++E + S +N + + VL+ +FE ESK++
Sbjct: 421 FDRXVQHDGYENTYALIHNGCKTILRPMKEVSPIKKSDENAQPKKVLSMCQFENESKETK 480
Query: 1874 IIYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGS 2053
+I+ L+ R V EE + ++PA ++++L F D ELP LPPMR +QH IDL+PG+
Sbjct: 481 VIFALMARKV-EESKEQDKEYPANVRKILDDFSDFWPTELPNQLPPMRDVQHAIDLIPGA 539
Query: 2054 SLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRA 2233
SLPNLPAYRM P AE++RQV+EL+ KG +R S SP VPALLTPKKDGSWRMCVDSRA
Sbjct: 540 SLPNLPAYRMNPTEHAELKRQVDELLTKGFIRESLSPYGVPALLTPKKDGSWRMCVDSRA 599
Query: 2234 INKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYE 2413
+NKIT+KYRFPIPRLDDMLDM+V S FSK+DLRSGYHQIR+R GDEWKT+FKT DGLYE
Sbjct: 600 MNKITIKYRFPIPRLDDMLDMMVRSVIFSKIDLRSGYHQIRIRPGDEWKTSFKTKDGLYE 659
Query: 2414 WLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQTRE 2551
WLVM FGL+NAPSTFMR+MT+VLKPF+G+FVVVYFDDILI+S++ E
Sbjct: 660 WLVMLFGLTNAPSTFMRIMTQVLKPFIGRFVVVYFDDILIYSRSCE 705
>gb|ADP20178.1| gag-pol polyprotein [Silene latifolia]
Length = 1518
Score = 552 bits (1422), Expect = e-154
Identities = 296/704 (42%), Positives = 413/704 (58%), Gaps = 22/704 (3%)
Frame = +2
Query: 503 IKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEEQ 682
IKVE+ +F G ++ +D L+W +E FE+K + + LKLKG A W+ ++ Q
Sbjct: 90 IKVEIPEFSGSLNPDDLLEWIRDVEKIFEYKNYNDVKACKVAVLKLKGYASLWYDNLKHQ 149
Query: 683 RARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIRV 862
R ++ K +R+W +K K+ +F+ DY +L+ +L NLKQ+ TVE Y EF L ++
Sbjct: 150 RLKEGKDPLRSWSKLKKKMLAKFVTKDYTQDLFIKLSNLKQKEKTVEAYLREFEQLTLQC 209
Query: 863 GLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAEKRLSRPNMRRNITSRT 1042
+NE +EQ +R+L GL+++I E+ + L++ +D +L EK + + +R
Sbjct: 210 EINEKSEQRIARFLEGLDKNIAAEVRMQPLWSYDDVVNLSLRVEKM----GKTKPVATRP 265
Query: 1043 SAT-SPRNNAAVRSDMRSSTTDKFEKGRNSRFQPQSNNGAGSSKSNTGSQARCYTCGDSG 1219
P ++ + +++ +KG+ + P+ N K +C+ C G
Sbjct: 266 KPVFRPYSSVKINDPPKTTPQSTVDKGK-APMNPKINPPLSRDK------IKCFQCQGFG 318
Query: 1220 HMSYACPERR---------------VNFTXXXXXXXXXXPXXXXXXXXXXXXLPVKGDCL 1354
H CP R V + P G L
Sbjct: 319 HFRKDCPSARTLTAIEVAEWEREGLVEYEEDEALVLEEVESEKETSPDQIVAHPDTGHSL 378
Query: 1355 VLQRILAAPNVEKEDLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEK 1534
L R++ + E +R +FR+R +VCN+I++GGS N+ S V KL LPT++
Sbjct: 379 FLWRVMHSQQAPLEADQRSMIFRSRCTVQGRVCNLIINGGSCTNVASTTMVSKLGLPTQE 438
Query: 1535 HPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDEAWCDVA-PMDVCHILLGRPWLYDKD 1711
HP+PYK+ W+ K+ V V +C++ F++ +DE CDV PMD CH+LLGRPW YD++
Sbjct: 439 HPNPYKLRWLSKDSGVRVDKQCIISFSIGKMYKDEVLCDVVVPMDACHLLLGRPWEYDRN 498
Query: 1712 MVHLTKANTYTFRKDGRKFTLHPL---QEEVDNSHKNNKERGVLTAQKFE--EESKDSGI 1876
H K N Y F+ G+K TL PL Q + + + + GVL + +E + +
Sbjct: 499 TTHQGKDNVYIFKHQGKKVTLTPLPPNQRDYGSPNVPEEMSGVLFLSEAAMIKEIRQAQP 558
Query: 1877 IYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSS 2056
+ +L+ R VN+E E P + L+ +F+++ DELP GLPP+R I+H IDLVPGS
Sbjct: 559 VLMLLSREVNQE---ENTVVPTAVAPLIQRFQEVFPDELPSGLPPLRGIEHHIDLVPGSV 615
Query: 2057 LPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAI 2236
LPN PAYR P E+Q Q+EELM KG VR S SPCAVPALL PKKDG+WRMC DSRAI
Sbjct: 616 LPNKPAYRCDPNATKELQHQIEELMAKGFVRESLSPCAVPALLVPKKDGTWRMCTDSRAI 675
Query: 2237 NKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEW 2416
N ITVKYRFPIPRLDDMLD L G+ FSK+DLR GYHQ+R+R GDEWKTAFKT GLYEW
Sbjct: 676 NNITVKYRFPIPRLDDMLDELSGASIFSKIDLRQGYHQVRIREGDEWKTAFKTKHGLYEW 735
Query: 2417 LVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQTR 2548
LVMPFGLSNAPSTFMR+MTEVL+P LGKF VVYFDDIL++S+T+
Sbjct: 736 LVMPFGLSNAPSTFMRLMTEVLRPCLGKFAVVYFDDILVYSKTK 779
>ref|XP_007207232.1| hypothetical protein PRUPE_ppa026856mg [Prunus persica]
gi|462402874|gb|EMJ08431.1| hypothetical protein
PRUPE_ppa026856mg [Prunus persica]
Length = 1493
Score = 551 bits (1419), Expect = e-154
Identities = 305/703 (43%), Positives = 409/703 (58%), Gaps = 19/703 (2%)
Frame = +2
Query: 503 IKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEEQ 682
IK E+ +F+G + ED+LDW +E +F+ + E + V V +LK A WW +++
Sbjct: 115 IKAEIPNFWGNLKIEDFLDWLVEVERFFDIMEVPEHKMVKMVAFRLKATAAVWWDQLQNL 174
Query: 683 RARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIRV 862
R RQ K ++RTW MKS + ++FL DY LY Q +V EYT EF L R
Sbjct: 175 RQRQGKQRVRTWRKMKSLMMERFLPTDYEQILYRMYLGCAQGTRSVSEYTEEFMRLAERN 234
Query: 863 GLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAE---KRLSRPNMRRNIT 1033
L ET+ Q +RY +GL SI++++G+ ++TL++A AL AE K +PN RRN T
Sbjct: 235 HLTETDNQKVARYNNGLKSSIQEKIGMQNIWTLQEAINMALKAELLEKEKRQPNFRRNKT 294
Query: 1034 SRTSATSPRNNAA-----VRSDMRSSTTDKFEKGRNSRFQPQSNNGAGSSKSNTGSQAR- 1195
+ T+ ++ A + T G+N F S+ + SQ
Sbjct: 295 EASDYTAGASSGAGDKEKAQQQNSGGMTKPATVGQNKNFNEGSSRNYNRGQPRNQSQNPY 354
Query: 1196 -------CYTCGDSGHMSYACPERR-VNFTXXXXXXXXXXPXXXXXXXXXXXXLP--VKG 1345
CY C GH S CPER+ NF + ++
Sbjct: 355 AKPMTDICYRCQKPGHRSNVCPERKQANFIEEADEDEEKDEVGENDYAGAEFAVEEGIEK 414
Query: 1346 DCLVLQRILAAPNVEKEDLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLP 1525
LVLQR+L AP KE+ +R ++FR+ KVC+VI+D GS N +SK+ VE L+L
Sbjct: 415 ITLVLQRVLLAP---KEEGQRHNIFRSLCSIKNKVCDVIVDNGSCENFVSKKLVEYLQLS 471
Query: 1526 TEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYD 1705
TE H SPY + W++K V V C V ++ D+ CDV MD CHILLGRPW +D
Sbjct: 472 TEPHVSPYSLGWVKKGPSVRVAETCRVPLSIGKHYRDDVLCDVIDMDACHILLGRPWQFD 531
Query: 1706 KDMVHLTKANTYTFRKDGRKFTLHPLQEEVDNSHKNNKERGVLTAQKFEEESKDSGIIYV 1885
D + N F + RK + Q + + + LT E+E ++
Sbjct: 532 VDATFKGRDNVILFSWNNRKIAMATTQP---SRKQELRSSSFLTLISNEQELNEAV---- 584
Query: 1886 LVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSSLPN 2065
+E GE D P ++QQ+L +F++L+++ LP LPPMR IQH IDLV G+SLPN
Sbjct: 585 -------KEAEGE-GDIPQDVQQILSQFQELLSENLPNELPPMRDIQHRIDLVHGASLPN 636
Query: 2066 LPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAINKI 2245
LP YRM PK ++ Q+EEL+ KG +R S SPCAVP LL PKKD +WRMCVDSRA+NKI
Sbjct: 637 LPHYRMSPKENDILREQIEELLRKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAVNKI 696
Query: 2246 TVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVM 2425
VKYRF IPRL+D+LD+L GSK FSK+DLRSGYHQIR+R GDEWKTAFK+ DGL+EWLVM
Sbjct: 697 KVKYRFSIPRLEDILDVLSGSKVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLFEWLVM 756
Query: 2426 PFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQTREK 2554
PFGLSNAPSTFMR+M +VL+PF+G FVVVYFDDILI+S T+E+
Sbjct: 757 PFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEE 799
>ref|XP_007220740.1| hypothetical protein PRUPE_ppa023598mg [Prunus persica]
gi|462417202|gb|EMJ21939.1| hypothetical protein
PRUPE_ppa023598mg [Prunus persica]
Length = 1457
Score = 543 bits (1398), Expect = e-151
Identities = 302/706 (42%), Positives = 411/706 (58%), Gaps = 22/706 (3%)
Frame = +2
Query: 503 IKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEEQ 682
IK E+ +F+G + ED+LDW +E +F+ + E + V V +LK A WW +++
Sbjct: 80 IKAEIPNFWGNLKIEDFLDWLVEVERFFDIMEVPEHKMVKMVAFRLKATAAVWWDQLQNS 139
Query: 683 RARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIRV 862
R RQ K ++RTW MKS + ++FL DY LY Q +V EYT EF +L R
Sbjct: 140 RQRQGKQRVRTWRKMKSLMMERFLPTDYEQILYRMYLGCTQGNRSVSEYTEEFMHLAERN 199
Query: 863 GLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAE---KRLSRPNMRRNIT 1033
L ET+ Q +RY +GL SI++++G+ ++TL++A A+ AE K +PN RRN T
Sbjct: 200 HLTETDNQKVARYNNGLKISIQEKIGMQNIWTLQEAINMAMKAELLEKEKRQPNFRRNTT 259
Query: 1034 SR----TSATSPRNNAAVRSDMRSSTTDKFEKGRNSRFQPQSNNGAGSSKSNTGSQAR-- 1195
T A+S + TT +N F S+ +S SQ
Sbjct: 260 EASEYATGASSGSGDKGKVQQQPRGTTKPATTVQNKNFNESSSRTFNRGQSRNQSQNPYA 319
Query: 1196 ------CYTCGDSGHMSYACPE-RRVNFTXXXXXXXXXXPXXXXXXXXXXXXLPVKGD-- 1348
CY C GH S CPE + NF + + +
Sbjct: 320 KPRTDICYRCQKPGHRSNVCPEWTQANFIEEVDEDEEKDEVGEDDYAGAEFAIEERMERI 379
Query: 1349 CLVLQRILAAPNVEKEDLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLPT 1528
LVLQR+L AP KE+ +R S+ R+ KVC+VI+D GS N +SK+ VE L+L T
Sbjct: 380 ILVLQRVLLAP---KEEGQRHSICRSLCSIKNKVCDVIVDNGSCENFVSKKLVEHLQLST 436
Query: 1529 EKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDK 1708
E H PY + W++K V V V ++ D+ CDV MD CHILLG+ W +D
Sbjct: 437 EPHVRPYSLGWVKKGPSVRVAETYSVPLSIGKHYIDDVLCDVIDMDACHILLGQLWQFDV 496
Query: 1709 DMVHLTKANTYTFRKDGRKFTLHPLQEEVDNSHKNNKERGVLTAQKFEEES----KDSGI 1876
D + + N F + RK + + + + LT E+E K++
Sbjct: 497 DATYKGRDNVILFSWNNRKIAMATTKPSKQSVEPKTRSSSFLTLISSEQELNKVVKEAEY 556
Query: 1877 IYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSS 2056
LV + + + GE +D P ++Q++L +F++L++++LP LP MR IQH IDLVPG++
Sbjct: 557 FCPLVLKGLLKLGRGE-SDIPQDVQKILSQFQELLSEKLPNELPSMRDIQHRIDLVPGAN 615
Query: 2057 LPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAI 2236
LPNLP YRM PK ++ Q+EEL+ KG +R S SPCAVP LL PKKD +WRMCVDSRAI
Sbjct: 616 LPNLPHYRMSPKENDILREQIEELLQKGFIRESLSPCAVPVLLVPKKDKTWRMCVDSRAI 675
Query: 2237 NKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEW 2416
NKITVK RFPIPRL+DMLD+L GS+ FSK+DLRSGYHQIR+R GDEWKTAFK+ DGL+EW
Sbjct: 676 NKITVKSRFPIPRLEDMLDVLSGSRVFSKIDLRSGYHQIRIRPGDEWKTAFKSKDGLFEW 735
Query: 2417 LVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQTREK 2554
LVMPFGLSNAPSTFMR+M +VL+PF+G FVVVYFDDILI+S T+E+
Sbjct: 736 LVMPFGLSNAPSTFMRLMNQVLRPFIGSFVVVYFDDILIYSTTKEE 781
>ref|XP_007049887.1| DNA/RNA polymerases superfamily protein [Theobroma cacao]
gi|508702148|gb|EOX94044.1| DNA/RNA polymerases
superfamily protein [Theobroma cacao]
Length = 546
Score = 541 bits (1395), Expect = e-151
Identities = 279/511 (54%), Positives = 354/511 (69%), Gaps = 18/511 (3%)
Frame = +2
Query: 569 SLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQ 748
SLE+YFEWK M E RKVLFVKLKLKG ALQWWKRVEEQRARQ K KI TWEHMKSKLRKQ
Sbjct: 37 SLENYFEWKPMAENRKVLFVKLKLKGTALQWWKRVEEQRARQGKLKISTWEHMKSKLRKQ 96
Query: 749 FLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIR 928
FL ADY MELYE+ H LKQ +TVEEYTSEF NL IRVGL E+NEQ+TSRYL+GLN SIR
Sbjct: 97 FLPADYTMELYEKFHCLKQNNMTVEEYTSEFNNLSIRVGLAESNEQITSRYLAGLNHSIR 156
Query: 929 DEMGVVRLFTLEDARQYALMAEKRLSRPNMRRNI----------TSRTSATSPRNNAAV- 1075
DEMGVVRL+ +EDARQYAL AEKR+ R R+ + R TS +N
Sbjct: 157 DEMGVVRLYNIEDARQYALSAEKRVLRYGARKPLYGTHWQNNSEARRGYPTSQQNYQGAA 216
Query: 1076 ---RSDMRSSTTDKFEKGRN-SRFQPQSNNGAGSSKSNTGSQARCYTCGDSGHMSYACPE 1243
+++ ++ +K +KG++ + Q+++G+ ++K + S RC+TCG+ GH+S+ACP+
Sbjct: 217 TINKTNKGATNVEKNDKGKSIMPYGGQNSSGSSTNKGGSNSHIRCFTCGEKGHISFACPQ 276
Query: 1244 RRVNFTXXXXXXXXXXPXXXXXXXXXXXXLPVKGDCLVLQRILAAP-NVEKEDLRRLSVF 1420
RRVN P +G+ LV++R++ N E ED +R S+F
Sbjct: 277 RRVNLAELGEELEPVY-DEYEEEVEEIDVYPAQGESLVVRRVMTTTVNEEAEDWKRRSIF 335
Query: 1421 RTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRC 1600
RTRV C KVC++++DGGS NIISKEAV KLKLPT KHP PYK+ W++K VPVT +C
Sbjct: 336 RTRVVCEGKVCDLVIDGGSMENIISKEAVNKLKLPTNKHPYPYKIGWLKKGHEVPVTTQC 395
Query: 1601 LVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHP 1780
LVKFTM N+++DEA CDV PMDV HIL+GRPWLYD DMVH TK NTY+F K+ +++TL+P
Sbjct: 396 LVKFTMGNNLDDEALCDVVPMDVGHILVGRPWLYDHDMVHKTKPNTYSFYKNNKRYTLYP 455
Query: 1781 LQEEVDNSHKN--NKERGVLTAQKFEEESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQ 1954
L+EE S N +K G L+A+ FE E + GI Y LV + + + + +P EIQQ
Sbjct: 456 LREETKKSANNKISKITGYLSAENFEAEGSEMGITYALVTKHLKSDQMSKSPQYPTEIQQ 515
Query: 1955 LLIKFKDLVADELPKGLPPMRSIQHVIDLVP 2047
LL +F +L ++LPK LPP+RSIQH IDLVP
Sbjct: 516 LLKEFGELFNEDLPKSLPPLRSIQHAIDLVP 546
>gb|ABE60891.1| putative polyprotein [Oryza sativa Japonica Group]
Length = 1713
Score = 508 bits (1308), Expect = e-141
Identities = 291/751 (38%), Positives = 414/751 (55%), Gaps = 65/751 (8%)
Frame = +2
Query: 497 GGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVE 676
G +K + F G E YL WE ++ F +E +KV L+ G AL WW+++
Sbjct: 138 GKLKFTMPKFEGGSDPEVYLTWELKVDKIFRLHNYSERKKVAMAALEFDGYALIWWEQML 197
Query: 677 EQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLI 856
+R + +R+W MK ++R +F+ Y +L+++L NLKQ L+V+EY E +I
Sbjct: 198 NEREEAGQGDVRSWAEMKREMRARFVPKHYRRDLFDKLQNLKQGSLSVDEYYKEMEKAMI 257
Query: 857 RVGLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAEKRLS---RPNMRRN 1027
R + E EQ +R++SGL+++I+ + + L + A AE++L + N +
Sbjct: 258 RANVYEDEEQSIARFMSGLHRNIQRIVEFQQYRNLIELVHQASKAERQLQQDMKSNRGVS 317
Query: 1028 ITSRTSATSPR-------NNAAVRSDMRSSTTDKF--EKGRNSRFQPQSNNGAGSSKSNT 1180
+++ +A+ + N A S + + + G++ + N A +S ++
Sbjct: 318 FSTKNAASGSKFTSRGSGNRGAFSSSSGGARSSNYGTSSGKDLAAPNERKNAANTSSTSV 377
Query: 1181 GSQAR-----CYTCGDSGHMSYACPERR---VNFTXXXXXXXXXXPXXXXXXXXXXXXLP 1336
GS + C+ CG GH++ CP R VN +
Sbjct: 378 GSSTKSSGIQCFKCGGRGHVARECPNNRTIVVNDQGEYESTSEEEQEDSEEENNLEKDIC 437
Query: 1337 V--KGDCLVLQRILAAPNVEKEDLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVE 1510
G LV+ +IL+ + E+ +R ++F+TR KV VI+DGGS N+ SKE VE
Sbjct: 438 EFESGAALVVTQILSVQMSDAENGQRHNLFQTRAKVQDKVVKVIIDGGSCHNLASKEMVE 497
Query: 1511 KLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDEAWCDVAPMDVCHILLGR 1690
KL L KHP PY V W+ + + R V F + + D CDVAPM VCH+LLGR
Sbjct: 498 KLGLKLLKHPHPYHVQWLNNSGSIKIAQRVKVPFKIGEYI-DTMECDVAPMTVCHMLLGR 556
Query: 1691 PWLYDKDMVHLTKANTYTFRKDGRKFTLHPL----------------------------- 1783
PW YD+ +H + N YT + G++ L P+
Sbjct: 557 PWQYDRSSLHCGRTNQYTIKWKGKELILKPMTPQQILAEHLQKSSEVRNESAKEGQKNNL 616
Query: 1784 ---QEEVDNSHK-----NNKERG---VLTAQKFEEES---KDSGIIYVLVGRSVNEELHG 1921
+ V SHK N K G V+ A K E ++++LV + +
Sbjct: 617 SAPHKSVSESHKPNMRDNKKREGENLVMIATKSEMRDVRRNPEQVLFILVCKDTLLSAN- 675
Query: 1922 EFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRA 2101
+ P+ + ++L +++D+ +E P GLPP+R I+H IDL+PG++LPN PAYR P+
Sbjct: 676 DLTSVPSVVARVLQEYEDVFPEETPVGLPPLRGIEHQIDLIPGATLPNRPAYRTNPEETK 735
Query: 2102 EIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLD 2281
EIQRQV+ L+DKG VR S SPCAVP +L PKKDGSWRMCVD RAIN ITV+YR PIPRLD
Sbjct: 736 EIQRQVQALLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITVRYRHPIPRLD 795
Query: 2282 DMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFM 2461
DMLD L GS FSK+DLRSG+HQIRM++GDEWKTAFKT GLYEWLVMPFGL+NAPSTFM
Sbjct: 796 DMLDELSGSMIFSKIDLRSGFHQIRMKIGDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFM 855
Query: 2462 RVMTEVLKPFLGKFVVVYFDDILIFSQTREK 2554
R+M VL+ F+GKFVVVYFDDILI+S+T E+
Sbjct: 856 RLMNHVLRAFIGKFVVVYFDDILIYSKTLEE 886
>gb|ADP20180.1| mutant gag-pol polyprotein [Pisum sativum]
Length = 1004
Score = 501 bits (1289), Expect = e-139
Identities = 290/721 (40%), Positives = 394/721 (54%), Gaps = 40/721 (5%)
Frame = +2
Query: 500 GIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWWKRVEE 679
GIK++V F GK E YL+WE LE F + KV ++ K AL WW ++ +
Sbjct: 71 GIKIKVPTFVGKSDPEAYLEWETKLEQIFNCHNYSNLEKVQVASIEFKEYALVWWDQLTK 130
Query: 680 QRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFYNLLIR 859
R R A+ I TWE MK +R++F+ + Y EL+ +L L Q +VEEY E L IR
Sbjct: 131 DRRRYAERPIDTWEEMKRIMRRRFVPSYYHRELHNKLQRLTQGSKSVEEYFKEMEVLKIR 190
Query: 860 VGLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAEKRLSRPNMRRNITSR 1039
+ E +E +R+L GLN I D + + +++ A+ E++L R + R
Sbjct: 191 ANVEEDDEATMARFLHGLNHDISDIVELHHYVEMDELVHQAIKVEQQLKRKSQAR----- 245
Query: 1040 TSATSPRNNAAVRSDMRSSTTDKFEKGRNSRFQPQSNNG----AGSSKSNTGSQARCYTC 1207
RN+ S T K E +S+ N G + SS +T +C+ C
Sbjct: 246 ------RNSTTFNSQSWKDKTKK-EGASSSKEATVENKGKTITSSSSSVSTNKSVKCFKC 298
Query: 1208 GDSGHMSYACPERRVNFTXXXXXXXXXXPXXXXXXXXXXXXLPVKGDCLVLQRILAAPNV 1387
GH++ CP +R GD L+++R+L +
Sbjct: 299 QGQGHIASQCPTKRTMLMEENEEIVEEEDGDYDKEFGEEIP---SGDLLMVRRMLGSQIK 355
Query: 1388 EKEDLRRLSVFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIE 1567
E++ +R ++F R F KVC++I+DGGS N+ S V +LKL T+ HP PYK+ W+
Sbjct: 356 EEDTSQRENLFHIRCFVQGKVCSLIIDGGSCTNVASTRLVSRLKLETKPHPKPYKLQWLN 415
Query: 1568 KERHVPVTLRCLVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTF 1747
+ + V + + F + ED CDV PM+ H+LLGRPW +D+ H +N Y+F
Sbjct: 416 ESVEMLVNKQVEICFKIGK-YEDVVLCDVVPMEASHLLLGRPWQFDRKANHDGYSNKYSF 474
Query: 1748 RKDGRKFTLHPLQ------------EEVDNSHKNN-KERGVLTAQKFEEESKDSGII--- 1879
+K L PL E+ D K KE+ +K ++ K +I
Sbjct: 475 MYHDQKINLVPLNPSEVREDQRKMSEKYDQERKEKEKEKEKNEKKKNDKREKKQSLIAKI 534
Query: 1880 -------------YVLVGRSV-------NEELHGEFADFPAEIQQLLIKFKDLVADELPK 1999
Y+L + V NE+ P I+ LL +FK+L +E+P
Sbjct: 535 RDVKEAIVSHQPLYLLFCKEVPLLTTISNEK------KLPNCIESLLQEFKELFPEEVPS 588
Query: 2000 GLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPA 2179
GLPP+R I+H IDL PG+SLPN PAYR P+ EIQRQV EL+ KG VR S SPCAVP
Sbjct: 589 GLPPIRGIEHHIDLNPGASLPNRPAYRSNPQQTQEIQRQVAELISKGWVRESLSPCAVPI 648
Query: 2180 LLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRM 2359
+L PKKDGSWRMC D RAI+ IT+KYR PIPRLDD+LD L G+ FSK+DL+SGYHQIR+
Sbjct: 649 ILVPKKDGSWRMCTDCRAISNITIKYRHPIPRLDDLLDELFGACLFSKIDLKSGYHQIRI 708
Query: 2360 RLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFS 2539
R GDEWKTAFKT GLYEW+VMPFGL+NAPSTFMR+M VL+ FLGKFVVVYFDDILI+S
Sbjct: 709 REGDEWKTAFKTKFGLYEWMVMPFGLTNAPSTFMRLMNHVLREFLGKFVVVYFDDILIYS 768
Query: 2540 Q 2542
+
Sbjct: 769 K 769
>gb|AAQ56388.1| putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|91795218|gb|ABE60890.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1616
Score = 489 bits (1260), Expect = e-135
Identities = 295/782 (37%), Positives = 401/782 (51%), Gaps = 80/782 (10%)
Frame = +2
Query: 446 QARGLEA---RLVQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERK 616
Q GL A R V+ D S G IK + F GK + YL WE +++ F E +
Sbjct: 133 QRHGLGAPPRREVRDNDDSLGKIKFTIPCFDGKYDPDAYLTWELAIDQKFACHDFPENKC 192
Query: 617 VLFVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHN 796
V + A WW +TW+ MK +R +F+ + +A +L +L
Sbjct: 193 VRAATSEFTDFASIWWSEFVRSNPNNTP---QTWDAMKRVMRARFVPSYHARDLLHKLQQ 249
Query: 797 LKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQ 976
L+Q +VEEY ++R GL E ++ +R++ GLN+ I+D + ++
Sbjct: 250 LRQGNKSVEEYYQALQTGMLRCGLVENDDAGMARFMGGLNREIQDILTYKEYNSINHLFH 309
Query: 977 YALMAEKRLS--RPNMRRNITSRTSATSPRNNAAVRSDMRSSTTDKFEKGRNSRFQP--- 1141
A AE+ + R + R NI++ +++ +NAA S ++ + K R S
Sbjct: 310 LACKAEREVQGRRASFRTNISAGRASSWTSSNAAAPSTRAAAPSSSSNKLRPSTTNSTPC 369
Query: 1142 --QSNNGAGSSKSNTGSQA---------RCYTCGDSGHMSYACPERRVNFTXXXXXXXXX 1288
+ G ++ S T S +C C GH+ CP RV
Sbjct: 370 PSEPTRGVAATPSKTSSSVASSGRTRDIQCLRCKGYGHVRKDCPSTRVMIVRADGGYSSA 429
Query: 1289 XPXXXXXXXXXXXXLPVKGDC------------------LVLQRILAAPNVEKEDLRRLS 1414
+GD LV+QR+L+A E +R +
Sbjct: 430 SDLDGETYALLATNNAREGDAPHQDEEHIGAEAAEHYESLVVQRVLSAQMERAEQNQRHT 489
Query: 1415 VFRTRVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTL 1594
+F+T+ ++ C VI+DGGS N+ S E VEKL L T+ HP PY + W+ V VT
Sbjct: 490 LFQTKCVIKERSCRVIIDGGSCNNLASAEMVEKLALSTQPHPQPYYIQWLNSSGKVKVTR 549
Query: 1595 RCLVKFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTL 1774
V F + + D CDV PM C +LLGRPW +DKD +H K+N Y+F +G+K L
Sbjct: 550 LVRVHFAIGS-YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVL 608
Query: 1775 HPLQEEV------------------------------------DNSHKNNKER------- 1825
HP+ EV NS +NNK
Sbjct: 609 HPMSPEVILKDELARASKQKNQEHTRSEHLIAANELEKHKKKPTNSVQNNKNEIKLKGSC 668
Query: 1826 GVLTAQKFEEESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGL 2005
+ T +E D+ + Y LV + + P + LL ++ D+ E+P GL
Sbjct: 669 FIATKSDLDEVDTDTVVCYALVCKETLFPIEDTPISLPPPVTNLLQEYADIFPKEVPPGL 728
Query: 2006 PPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALL 2185
PP+R I+H IDL+PG+SLPN YR P+ EIQRQV+EL+DKG VR S SPC+VP LL
Sbjct: 729 PPIRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLL 788
Query: 2186 TPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRL 2365
PKKDGSWRMCVD RAIN IT++YR PIPRLDDMLD L GS FSK+DLRSGYHQIRM+L
Sbjct: 789 VPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKL 848
Query: 2366 GDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQT 2545
GDEWKTAFKT GLYEWLVMPFGL+NAPSTFMR+M EVL+ F+G+FVVVYFDDILI+S++
Sbjct: 849 GDEWKTAFKTKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRS 908
Query: 2546 RE 2551
E
Sbjct: 909 IE 910
>gb|AAK51582.1|AC022352_18 Putative retroelement [Oryza sativa Japonica Group]
gi|31431012|gb|AAP52850.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 2447
Score = 489 bits (1258), Expect = e-135
Identities = 292/759 (38%), Positives = 399/759 (52%), Gaps = 57/759 (7%)
Frame = +2
Query: 440 HNQARGLEARL---VQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEE 610
HN RG+ R V+ D + IK ++ F GK + YL WE +++ F E
Sbjct: 129 HNNRRGMGGRRRREVRNNDDAFSKIKFKIPPFDGKYDPDAYLSWEIAVDQKFACHEFPES 188
Query: 611 RKVLFVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERL 790
+V + A WW E + +TW+ +K +R +F+ + YA +L RL
Sbjct: 189 TRVRAATSEFTDFASVWWI---EHGKKNPNNMPQTWDALKRVMRARFVPSYYARDLLNRL 245
Query: 791 HNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSI------RDEMGVVRL 952
L+Q +VEEY E L+R L ET + +R+L GLN+ I +D + RL
Sbjct: 246 QQLRQGAKSVEEYYQELQMGLLRCNLEETEDAAMARFLGGLNREIYDIVDYKDYTNMTRL 305
Query: 953 FTLEDARQYALMAEKRLSRPNMRRNITS--RTSATSPRNNAAVRSDM----RSSTTDKFE 1114
F L + + + ++ N TS +T T P A S R++ +
Sbjct: 306 FHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGRTASPSSTPTTSRAAPPPSSD 365
Query: 1115 KGRNSRFQPQSNNGAGSSKSNTGSQ--ARCYTCGDSGHMSYACPERRV----NFTXXXXX 1276
K QP + SS ++TG +C+ C GH+ CP +RV N
Sbjct: 366 KSATKAAQPAPS---ASSMASTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGEYSSA 422
Query: 1277 XXXXXPXXXXXXXXXXXXLPVKG----------DCLVLQRILAAPNVEKEDLRRLSVFRT 1426
P + + L++QR+L+A + E +R ++F+T
Sbjct: 423 SDFDDDTLALLAADHADNEPPEEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQT 482
Query: 1427 RVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLV 1606
+ ++ C +I+DGGS N+ S E VEKL L T+ HP PY + W+ VT +
Sbjct: 483 KCVVKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNSGKAKVTKLVHI 542
Query: 1607 KFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHP-- 1780
F + N D CDV PM C+ILLGRPW +D+D +H ++N Y+F +K LH
Sbjct: 543 NFAIGN-YHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHSMS 601
Query: 1781 ----LQEEVDNSHKNNKERG--------------------VLTAQKFEEESKDSGIIYVL 1888
L+++V + K+ E + T E + Y L
Sbjct: 602 PEDILRDDVAKAAKSKCESDKKAQSDGKKPETINLKPKCLLATKSDINELIASPSVAYAL 661
Query: 1889 VGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSSLPNL 2068
V + LH P + +L ++ D+ E+P GLPP+R I+H IDL+PG+SLPN
Sbjct: 662 VCKDALISLHDMQHSLPPAVANILQEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNR 721
Query: 2069 PAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAINKIT 2248
YR P+ EIQRQV EL+DKG VR S SPCAVP +L PKKDGSWRMCVD RAIN IT
Sbjct: 722 APYRTNPEETKEIQRQVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNIT 781
Query: 2249 VKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVMP 2428
++YR PIPRLDDMLD L GS FSK+DLRSGYHQIRM+LGDEWKTAFKT GLYEWLVMP
Sbjct: 782 IRYRHPIPRLDDMLDELSGSIVFSKVDLRSGYHQIRMKLGDEWKTAFKTKFGLYEWLVMP 841
Query: 2429 FGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQT 2545
FGL+NAPSTFMR+M EVL+PF+GKFVVVYFDDILI+S++
Sbjct: 842 FGLTNAPSTFMRLMNEVLRPFIGKFVVVYFDDILIYSKS 880
Score = 65.9 bits (159), Expect = 9e-08
Identities = 33/72 (45%), Positives = 48/72 (66%), Gaps = 2/72 (2%)
Frame = +2
Query: 2342 YHQIRMRLGDEWKT--AFKTPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVY 2515
+H+ +GD+ T + GLYE+ VM FGL+NAP+ FM +M +V +L KFVVV+
Sbjct: 1603 HHKFAATIGDDRATNPSGFASYGLYEFTVMSFGLTNAPAFFMNLMNKVFMEYLDKFVVVF 1662
Query: 2516 FDDILIFSQTRE 2551
DDIL++SQ+ E
Sbjct: 1663 IDDILVYSQSEE 1674
>gb|AAK91332.1|AC090441_14 Putative gag-pol polyprotein [Oryza sativa Japonica Group]
gi|15217296|gb|AAK92640.1|AC079634_1 Putative
retroelement [Oryza sativa Japonica Group]
gi|31431373|gb|AAP53161.1| retrotransposon protein,
putative, Ty3-gypsy subclass [Oryza sativa Japonica
Group]
Length = 1708
Score = 481 bits (1239), Expect = e-133
Identities = 287/767 (37%), Positives = 393/767 (51%), Gaps = 78/767 (10%)
Frame = +2
Query: 485 DLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKGAALQWW 664
D S G IK + F K + YL WE +++ F E ++V + A WW
Sbjct: 149 DDSLGKIKFTIPCFDEKYDPDAYLTWELAIDQKFACHDFPENKRVRAATSEFTDFASIWW 208
Query: 665 KRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEEYTSEFY 844
+TW+ MK +R +F+ + +A +L +L L+Q +VEEY
Sbjct: 209 SEFVRSNPNNTP---QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEEYYQALQ 265
Query: 845 NLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAEKRLS--RPNM 1018
++R GL E ++ +R++ GLN+ I+D + ++ A AE+ + R +
Sbjct: 266 TGMLRCGLVENDDAGMARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQGRRASF 325
Query: 1019 RRNITSRTSATSPRNNAAVRSD-----------MRSSTTDKF----EKGRNSRFQPQSNN 1153
R NI++ +++ +N A S +R STT+ E R P ++
Sbjct: 326 RTNISAGRASSWTSSNVAAPSTRAAAPSSSNNKLRPSTTNSTPCPSEPTRGVAATPSKSS 385
Query: 1154 GAGSSKSNTGSQARCYTCGDSGHMSYACPERRVNFTXXXXXXXXXXPXXXXXXXXXXXXL 1333
+ +S T +C C GH+ CP RV
Sbjct: 386 SSVASSGRT-RDIQCLRCKGYGHVRKDCPSTRVMIVRADGGYSSASDLDEETYALLATNN 444
Query: 1334 PVKGDC------------------LVLQRILAAPNVEKEDLRRLSVFRTRVFCGKKVCNV 1459
KGD LV+QR+L+A E +R ++F+T+ ++ C V
Sbjct: 445 AGKGDAPHQDEEHIGAEAAEHYESLVVQRVLSAQMERAEQNQRHTLFQTKCVIKERSCRV 504
Query: 1460 ILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKFTMSNDVEDE 1639
I+D GS N+ S E VEKL L T+ HP PY + W+ V VT V F + + D
Sbjct: 505 IIDRGSCNNLASAEMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIGS-YHDS 563
Query: 1640 AWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHPLQEEV-------- 1795
CDV PM C I LGRPW +DKD +H K+N Y+F +G+K LHP+ EV
Sbjct: 564 INCDVVPMQACSIFLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSPEVILKDELAR 623
Query: 1796 ----------------------------DNSHKNNKER-------GVLTAQKFEEESKDS 1870
NS +NNK + T +E D+
Sbjct: 624 ASKQKNQEHTRSEHLIAANELEKHKKKPTNSVQNNKNEIKLKGSCFIATKSDLDEVDTDT 683
Query: 1871 GIIYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPG 2050
+ Y LV + + P + LL ++ D+ E+P GLPP+R I+H IDL+PG
Sbjct: 684 VVCYALVCKETLFPIEDTPISLPPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQIDLIPG 743
Query: 2051 SSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSR 2230
+SLPN YR P+ EIQRQV+EL+DKG VR S SPC++P LL PKKDGSWRMCVD R
Sbjct: 744 ASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSIPVLLVPKKDGSWRMCVDCR 803
Query: 2231 AINKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLY 2410
AIN IT++YR PIPRLDDMLD L GS FSK+DLRSGYHQIRM+LGDEWKTAFKT GLY
Sbjct: 804 AINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFKTKFGLY 863
Query: 2411 EWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQTRE 2551
EWLVMPFGL+NAPSTF+R+M EVL+ F+G+FVVVYFDDILI+S++ E
Sbjct: 864 EWLVMPFGLTNAPSTFIRLMNEVLRAFIGRFVVVYFDDILIYSRSIE 910
>dbj|BAA89466.1| gag-pol polyprotein [Oryza sativa Indica Group]
Length = 1587
Score = 481 bits (1238), Expect = e-133
Identities = 291/773 (37%), Positives = 397/773 (51%), Gaps = 78/773 (10%)
Frame = +2
Query: 467 RLVQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEERKVLFVKLKLKG 646
R V+ D S G IK + F GK + YL WE ++ F E ++V +
Sbjct: 143 REVRDNDDSLGKIKFTIPCFDGKYDPDAYLTWELAIVQKFACHDFPENKRVRAATSEFTD 202
Query: 647 AALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERLHNLKQRGLTVEE 826
A WW +TW+ MK +R +F+ + +A +L +L L+Q +VEE
Sbjct: 203 FASIWWSEFVRSNPNNTP---QTWDAMKRVMRARFVPSYHARDLLHKLQQLRQGNKSVEE 259
Query: 827 YTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSIRDEMGVVRLFTLEDARQYALMAEKRLS 1006
Y ++R GL E ++ +R++ GLN+ I+D + ++ A AE+ +
Sbjct: 260 YYQALQIGMLRCGLVENDDAGMARFMGGLNREIQDILAYKEYNSINRLFHLACKAEREVQ 319
Query: 1007 --RPNMRRNITSRTSATSPRNNAAVRSD-----------MRSSTTDKF----EKGRNSRF 1135
R + R NI++ +++ +NAA S +R STT+ E R
Sbjct: 320 GRRASFRTNISAGCASSWTSSNAAAPSTRAAAPSCSSNKLRPSTTNSTPCPSEPTRGVAA 379
Query: 1136 QPQSNNGAGSSKSNTGSQARCYTCGDSGHMSYACPERRVNFTXXXXXXXXXXPXXXXXXX 1315
P ++ + +S T +C C GH+ CP RV
Sbjct: 380 TPSKSSSSVASSGRT-RDIQCLRCKGYGHVRKDCPSTRVMIVRADGGYYFDSDLDEETYA 438
Query: 1316 XXXXXLPVKGDC------------------LVLQRILAAPNVEKEDLRRLSVFRTRVFCG 1441
+GD LV+QR+L+A E + ++F+T+
Sbjct: 439 LLATNNAGEGDAPHQDEEHIRAEAAEHYESLVVQRVLSAQMERAEQNQLHTLFQTKCVIK 498
Query: 1442 KKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLVKFTMS 1621
++ C+VI+DGGS N+ S E VEKL L T+ HP PY + W+ V VT V F +
Sbjct: 499 ERSCHVIIDGGSCNNLASAEMVEKLALSTQPHPQPYYIQWLNSSGKVKVTRLVRVHFAIG 558
Query: 1622 NDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHPLQEEV-- 1795
+ D CDV PM C +LLGRPW +DKD +H K+N Y+F +G+K LHP+ EV
Sbjct: 559 S-YHDSINCDVVPMQACSMLLGRPWQFDKDSLHFGKSNQYSFVHNGKKLVLHPMSPEVIL 617
Query: 1796 ----------------------------------DNSHKNNKER-------GVLTAQKFE 1852
NS +NNK + T +
Sbjct: 618 KDELARASKQKNQEHTRSEHLIAANELEKHKKKPTNSVQNNKNEIKLKGSCFIATKSDLD 677
Query: 1853 EESKDSGIIYVLVGRSVNEELHGEFADFPAEIQQLLIKFKDLVADELPKGLPPMRSIQHV 2032
E D+ Y LV + + + LL ++ D+ E+P GLPP+R I+H
Sbjct: 678 EVDTDTVFCYALVCKETLFPIEDTPISLRPPVTNLLQEYADIFPKEVPPGLPPIRGIEHQ 737
Query: 2033 IDLVPGSSLPNLPAYRMPPKHRAEIQRQVEELMDKGLVRASKSPCAVPALLTPKKDGSWR 2212
IDL+PG+SLPN YR P+ EIQRQV+EL+DKG VR S SPC+VP LL PKKDGSWR
Sbjct: 738 IDLIPGASLPNRAPYRTNPEETKEIQRQVQELLDKGYVRESLSPCSVPVLLVPKKDGSWR 797
Query: 2213 MCVDSRAINKITVKYRFPIPRLDDMLDMLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFK 2392
MCVD RAIN IT++YR PIPRLDDMLD L GS FSK+DLRSGYHQIRM+LGDEWKTAFK
Sbjct: 798 MCVDCRAINNITIRYRHPIPRLDDMLDELSGSLVFSKIDLRSGYHQIRMKLGDEWKTAFK 857
Query: 2393 TPDGLYEWLVMPFGLSNAPSTFMRVMTEVLKPFLGKFVVVYFDDILIFSQTRE 2551
T GLYEWLVMPFGL+NAPSTFMR+M EVL+ F+G+FVVVYFDDILI+S++ E
Sbjct: 858 TKFGLYEWLVMPFGLTNAPSTFMRLMNEVLRAFIGRFVVVYFDDILIYSRSIE 910
>gb|AAX95495.1| Retrotransposon gag protein, putative [Oryza sativa Japonica Group]
Length = 1739
Score = 480 bits (1235), Expect = e-132
Identities = 290/744 (38%), Positives = 401/744 (53%), Gaps = 42/744 (5%)
Frame = +2
Query: 440 HNQARGLEARL---VQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEE 610
HN RG+ R V+ D + IK ++ F GK + +L WE +++ F + E
Sbjct: 487 HNNRRGMGGRRRREVRNNDDAFSKIKFKIPPFDGKYDPDAFLSWEIAVDQKFAYHEFPEN 546
Query: 611 RKVLFVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERL 790
+V + A WW E + +TW+ +K +R +F+ + YA +L RL
Sbjct: 547 TRVRAATSEFTDFASVWWI---EHGKKNPNNMPQTWDALKRVMRARFVPSYYARDLLNRL 603
Query: 791 HNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSI------RDEMGVVRL 952
L+Q +VEEY E L+R L ET + +R+L GLN+ I +D + RL
Sbjct: 604 QQLRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGGLNREIYDIVDYKDYTNMTRL 663
Query: 953 FTLEDARQYALMAEKRLSRPNMRRNITS--RTSATSPRNNAAVRSDM----RSSTTDKFE 1114
F L + + + ++ N TS +T T P A S R++ +
Sbjct: 664 FHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGRTASPSSTPTTSRAAPPPSSD 723
Query: 1115 KGRNSRFQPQSNNGAGSSKSNTGSQ--ARCYTCGDSGHMSYACPERRV----NFTXXXXX 1276
K QP + SS +TG +C+ C GH+ CP +RV N
Sbjct: 724 KSVTKAAQPAPS---ASSMVSTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGEYSSA 780
Query: 1277 XXXXXPXXXXXXXXXXXXLPVKG----------DCLVLQRILAAPNVEKEDLRRLSVFRT 1426
P + + L++QR+L+A + E +R ++F+T
Sbjct: 781 SDFDDDTLALLAADHADNEPPEEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQT 840
Query: 1427 RVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLV 1606
+ ++ C +I+DGGS N+ S E VEKL L T+ HP PY + W+ V VT +
Sbjct: 841 KCVLKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNSGKVKVTKLVHI 900
Query: 1607 KFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHP-- 1780
F + N D CDV PM C+ILLGRPW +D+D +H ++N Y+F +K LHP
Sbjct: 901 NFAIGN-YHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 959
Query: 1781 ----LQEEVDNSHKNNKERGVLTAQKFEEESKDSGIIYV-----LVGRSVNEELHGEFAD 1933
L+++V + K+ E + +K + + K I + L +S EL
Sbjct: 960 SEDILRDDVAKAAKSKCE----SDKKAQSDGKKPETINLKPKCLLATKSDITEL------ 1009
Query: 1934 FPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQR 2113
+ +++ D+ E+P GLPP+R I+H IDL+PG+SLPN YR P+ EIQR
Sbjct: 1010 IASPSVAYALEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQR 1069
Query: 2114 QVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLD 2293
QV EL+DKG VR S SPCAVP +L PKKDGSWRMCVD RAIN IT++YR PIPRLDDMLD
Sbjct: 1070 QVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLD 1129
Query: 2294 MLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMT 2473
L GS FSK+DLRSGYHQIRM+LGDEWKT FKT GLYEWLVMPFGL+NAPSTFMR+M
Sbjct: 1130 ELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMN 1189
Query: 2474 EVLKPFLGKFVVVYFDDILIFSQT 2545
EVL+PF+GKFVVVYFDDILI+S++
Sbjct: 1190 EVLRPFIGKFVVVYFDDILIYSKS 1213
>gb|AAX96717.1| retrotransposon protein, putative, Ty3-gypsy sub-class [Oryza sativa
Japonica Group] gi|108864301|gb|ABA93040.2|
retrotransposon protein, putative, Ty3-gypsy subclass
[Oryza sativa Japonica Group]
Length = 1748
Score = 480 bits (1235), Expect = e-132
Identities = 290/744 (38%), Positives = 401/744 (53%), Gaps = 42/744 (5%)
Frame = +2
Query: 440 HNQARGLEARL---VQALDLSGGGIKVEVADFFGKMHAEDYLDWEASLESYFEWKTMTEE 610
HN RG+ R V+ D + IK ++ F GK + +L WE +++ F + E
Sbjct: 496 HNNRRGMGGRRRREVRNNDDAFSKIKFKIPPFDGKYDPDAFLSWEIAVDQKFAYHEFPEN 555
Query: 611 RKVLFVKLKLKGAALQWWKRVEEQRARQAKPKIRTWEHMKSKLRKQFLAADYAMELYERL 790
+V + A WW E + +TW+ +K +R +F+ + YA +L RL
Sbjct: 556 TRVRAATSEFTDFASVWWI---EHGKKNPNNMPQTWDALKRVMRARFVPSYYARDLLNRL 612
Query: 791 HNLKQRGLTVEEYTSEFYNLLIRVGLNETNEQLTSRYLSGLNQSI------RDEMGVVRL 952
L+Q +VEEY E L+R L ET + +R+L GLN+ I +D + RL
Sbjct: 613 QQLRQGAKSVEEYYQELQMGLLRCNLEETEDTAMARFLGGLNREIYDIVDYKDYTNMTRL 672
Query: 953 FTLEDARQYALMAEKRLSRPNMRRNITS--RTSATSPRNNAAVRSDM----RSSTTDKFE 1114
F L + + + ++ N TS +T T P A S R++ +
Sbjct: 673 FHLACKAEREVQGRRASAKANFSAGKTSSWQTRTTPPAGRTASPSSTPTTSRAAPPPSSD 732
Query: 1115 KGRNSRFQPQSNNGAGSSKSNTGSQ--ARCYTCGDSGHMSYACPERRV----NFTXXXXX 1276
K QP + SS +TG +C+ C GH+ CP +RV N
Sbjct: 733 KSVTKAAQPAPS---ASSMVSTGRMRDVQCHRCKGFGHVQRDCPSKRVLVVKNDGEYSSA 789
Query: 1277 XXXXXPXXXXXXXXXXXXLPVKG----------DCLVLQRILAAPNVEKEDLRRLSVFRT 1426
P + + L++QR+L+A + E +R ++F+T
Sbjct: 790 SDFDDDTLALLAADHADNEPPEEHIGAAFADHYESLIVQRVLSAQMEKAEQNQRHTLFQT 849
Query: 1427 RVFCGKKVCNVILDGGSSANIISKEAVEKLKLPTEKHPSPYKVAWIEKERHVPVTLRCLV 1606
+ ++ C +I+DGGS N+ S E VEKL L T+ HP PY + W+ V VT +
Sbjct: 850 KCVLKERCCRMIIDGGSCNNLASSEMVEKLALSTKPHPHPYYIQWLNNSGKVKVTKLVHI 909
Query: 1607 KFTMSNDVEDEAWCDVAPMDVCHILLGRPWLYDKDMVHLTKANTYTFRKDGRKFTLHP-- 1780
F + N D CDV PM C+ILLGRPW +D+D +H ++N Y+F +K LHP
Sbjct: 910 NFAIGN-YHDVVECDVVPMQACNILLGRPWQFDRDSMHHGRSNQYSFLYHDKKIVLHPMS 968
Query: 1781 ----LQEEVDNSHKNNKERGVLTAQKFEEESKDSGIIYV-----LVGRSVNEELHGEFAD 1933
L+++V + K+ E + +K + + K I + L +S EL
Sbjct: 969 SEDILRDDVAKAAKSKCE----SDKKAQSDGKKPETINLKPKCLLATKSDITEL------ 1018
Query: 1934 FPAEIQQLLIKFKDLVADELPKGLPPMRSIQHVIDLVPGSSLPNLPAYRMPPKHRAEIQR 2113
+ +++ D+ E+P GLPP+R I+H IDL+PG+SLPN YR P+ EIQR
Sbjct: 1019 IASPSVAYALEYSDVFPKEVPPGLPPVRGIEHQIDLIPGASLPNRAPYRTNPEETKEIQR 1078
Query: 2114 QVEELMDKGLVRASKSPCAVPALLTPKKDGSWRMCVDSRAINKITVKYRFPIPRLDDMLD 2293
QV EL+DKG VR S SPCAVP +L PKKDGSWRMCVD RAIN IT++YR PIPRLDDMLD
Sbjct: 1079 QVHELLDKGYVRESLSPCAVPVILVPKKDGSWRMCVDCRAINNITIRYRHPIPRLDDMLD 1138
Query: 2294 MLVGSKFFSKLDLRSGYHQIRMRLGDEWKTAFKTPDGLYEWLVMPFGLSNAPSTFMRVMT 2473
L GS FSK+DLRSGYHQIRM+LGDEWKT FKT GLYEWLVMPFGL+NAPSTFMR+M
Sbjct: 1139 ELSGSIVFSKVDLRSGYHQIRMKLGDEWKTTFKTKFGLYEWLVMPFGLTNAPSTFMRLMN 1198
Query: 2474 EVLKPFLGKFVVVYFDDILIFSQT 2545
EVL+PF+GKFVVVYFDDILI+S++
Sbjct: 1199 EVLRPFIGKFVVVYFDDILIYSKS 1222