BLASTX nr result

ID: Papaver25_contig00010665 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00010665
         (445 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Rici...    40   7e-06

>ref|XP_002528622.1| mRNA turnover protein 4 mrt4, putative [Ricinus communis]
           gi|223531967|gb|EEF33780.1| mRNA turnover protein 4
           mrt4, putative [Ricinus communis]
          Length = 182

 Score = 40.0 bits (92), Expect(2) = 7e-06
 Identities = 23/61 (37%), Positives = 34/61 (55%)
 Frame = +2

Query: 206 EKDEDLPLPPRSSAMDLCPKLKGLGMPVELSGTSIKLTDTFSVCEDGVRVTENAAKILRL 385
           EK E    P      ++ P L+  GMPV L+   ++L   F VCE+G  ++  +A+ILRL
Sbjct: 87  EKVELKEGPLEQFTHEMEPFLRKQGMPVRLNKGVVELVSDFVVCEEGKHLSPESARILRL 146

Query: 386 L 388
           L
Sbjct: 147 L 147



 Score = 35.4 bits (80), Expect(2) = 7e-06
 Identities = 16/35 (45%), Positives = 21/35 (60%)
 Frame = +1

Query: 1   GVLLTDKTKDEVLRKFKEYREYDFVKLGQTPMKPV 105
           G+ LT+  K+EV R F EY EYDF + G    + V
Sbjct: 55  GLFLTNLPKEEVERLFNEYEEYDFARTGSIATEKV 89


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