BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00009792
         (4091 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D sub...  1654   0.0  
emb|CBI21137.3| unnamed protein product [Vitis vinifera]             1629   0.0  
ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV a...  1617   0.0  
ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D sub...  1617   0.0  
ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citr...  1608   0.0  
ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV a...  1607   0.0  
ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D sub...  1604   0.0  
ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theob...  1601   0.0  
ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prun...  1582   0.0  
ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putativ...  1579   0.0  
ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D sub...  1578   0.0  
gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus...  1567   0.0  
ref|XP_002324332.2| DNA-directed RNA polymerase family protein [...  1565   0.0  
ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D sub...  1551   0.0  
gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus n...  1547   0.0  
ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D sub...  1542   0.0  
ref|XP_007136942.1| hypothetical protein PHAVU_009G087100g [Phas...  1531   0.0  
gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlise...  1523   0.0  
ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV a...  1522   0.0  
ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV a...  1516   0.0  

>ref|XP_002283296.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Vitis
            vinifera]
          Length = 1198

 Score = 1654 bits (4284), Expect = 0.0
 Identities = 810/1196 (67%), Positives = 973/1196 (81%), Gaps = 6/1196 (0%)
 Frame = -1

Query: 3803 KTSNGGSVSEKASTSTFTDQEPINLSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVE 3624
            K SNG  V  +         E  +L++++L  FCK ++VSFF EYGLI HQI S+N F++
Sbjct: 19   KLSNG--VQMEIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIK 76

Query: 3623 HGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEK 3444
            +GIQ++FDS   I VEPG+DPSK+GEG+W+YA+V FGKV L++P  W GE     D KE 
Sbjct: 77   NGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKES 132

Query: 3443 YLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHS-VQKQVISEDERDV 3267
             L   PRHARLQNMTYS+RMK  V  +VYTQ L+++DK+K+GK++  V+K+VI ED RD+
Sbjct: 133  -LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 191

Query: 3266 VIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTW 3087
            +IGRIPVMVKS +CW+NG+++ DC++D GGYF++KGAEK FIAQEQ+CL RLWV  +PTW
Sbjct: 192  LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 251

Query: 3086 LVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSD 2907
            +V YR    + KR+RV ++++  P  ++    G KVLT++F S +IP+WI+FFALG SSD
Sbjct: 252  MVAYRP---IWKRKRVYVKLE--PPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSD 306

Query: 2906 KEIVDTIEVDISDARTVNILLATINNAEKACQA----FSKEGEALKYMDEQIKSTKFPPV 2739
            KE+VD I+ +I DA   NIL+A+I+ A++  +     F ++G A+ ++D+ +KS KFPP 
Sbjct: 307  KEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPG 366

Query: 2738 EGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXX 2559
            E I+E I KYLFP+ +G KQKA FLGYMVK L   YTGRRKC+NRDDFRNK         
Sbjct: 367  ESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELL 426

Query: 2558 XXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKK 2379
                  HI HA+R+M + MQ++LYGDR ++PI+ YLDASIITNGLSRAFSTG W+HPFK+
Sbjct: 427  ERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKR 486

Query: 2378 SEKIAGVVANLRRLNPLQMTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEK 2199
             E+I+GVVA LRR NPLQMT+D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE 
Sbjct: 487  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 546

Query: 2198 CGLVKNMAITGLVSTNLMEPLKDKLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDD 2019
            CGLVKN+AITGLVST +++PL DKLF+CGMEKLVDD  S    GK+KVF++GDWVGVC+D
Sbjct: 547  CGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDT-STKLSGKNKVFLDGDWVGVCED 605

Query: 2018 SLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAKGG 1839
             +SFV +L+  RR K +P QVEIK D + GEVRIFSDAGRILRPLL+VEN+KK+K  KG 
Sbjct: 606  PISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGD 665

Query: 1838 -YTFQSLLXXXXXXXXXXXXXXDCQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLSC 1662
             +TFQSLL              DC  AWGIKYL  G  +  P+ YTHCELD+SFLLGLSC
Sbjct: 666  DFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSC 724

Query: 1661 GIIPFANHDHARRVLYQSEKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCL 1482
            GIIP+ANHDHARRVLYQSEKHSQQA+GFSTTNPNIRVDTLS QLYYPQRPLFRTMISDCL
Sbjct: 725  GIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISDCL 784

Query: 1481 GLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRSY 1302
            G P + +G  G++ +PEYFNGQ AIVAVNVH GYNQEDSLVMNRASLERGMFR+EHIRSY
Sbjct: 785  GKPGYSEGHKGIVPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 844

Query: 1301 KAEVDNMELFETKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAE 1122
            K+EVDN E  + KR K +D V FGK QSKIGRVDSLDDDGFP+IGANLQ GDIVIGRCAE
Sbjct: 845  KSEVDNNESLDKKR-KSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAE 903

Query: 1121 SGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGL 942
            SG DHSIKLKHTE+G VQKVV++AND+G+NFAVVSLRQ+R+P LGDKFSSMHGQKGV+G 
Sbjct: 904  SGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGF 963

Query: 941  LESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSI 762
            LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG +R+ATPF+T S+
Sbjct: 964  LESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSV 1023

Query: 761  DEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVH 582
            D I +QLHRAGFSRWG ERVYNG++GEM+RSLIFMGPTFYQRL HMAEDKVK+RNTGPVH
Sbjct: 1024 DAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVH 1083

Query: 581  PLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANV 402
            PLTRQPV+DRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSD + MH+C +C NI+NV
Sbjct: 1084 PLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNV 1143

Query: 401  IQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            IQRSV GG  K+RG YCR+C+S+E IVKV++PYGAKLLCQELFSMGI +KF T+ C
Sbjct: 1144 IQRSVAGGR-KVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1198


>emb|CBI21137.3| unnamed protein product [Vitis vinifera]
          Length = 1220

 Score = 1629 bits (4219), Expect = 0.0
 Identities = 805/1196 (67%), Positives = 964/1196 (80%), Gaps = 6/1196 (0%)
 Frame = -1

Query: 3803 KTSNGGSVSEKASTSTFTDQEPINLSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVE 3624
            K SNG  V  +         E  +L++++L  FCK ++VSFF EYGLI HQI S+N F++
Sbjct: 55   KLSNG--VQMEIDDDLMGSIEIDDLNKEYLKTFCKKVAVSFFNEYGLIQHQINSFNDFIK 112

Query: 3623 HGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEK 3444
            +GIQ++FDS   I VEPG+DPSK+GEG+W+YA+V FGKV L++P  W GE     D KE 
Sbjct: 113  NGIQRVFDSFGEIPVEPGYDPSKRGEGDWRYASVRFGKVTLERPRVWAGES----DGKES 168

Query: 3443 YLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHS-VQKQVISEDERDV 3267
             L   PRHARLQNMTYS+RMK  V  +VYTQ L+++DK+K+GK++  V+K+VI ED RD+
Sbjct: 169  -LNFLPRHARLQNMTYSSRMKAQVHFQVYTQKLVRSDKYKTGKDNKYVEKKVIFEDNRDI 227

Query: 3266 VIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTW 3087
            +IGRIPVMVKS +CW+NG+++ DC++D GGYF++KGAEK FIAQEQ+CL RLWV  +PTW
Sbjct: 228  LIGRIPVMVKSELCWMNGVERGDCEYDHGGYFLIKGAEKTFIAQEQICLKRLWVSSNPTW 287

Query: 3086 LVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSD 2907
            +V YR    + KR+RV ++++  P  ++    G KVLT++F S +IP+WI+FFALG SSD
Sbjct: 288  MVAYRP---IWKRKRVYVKLE--PPKDENNRGGEKVLTVYFSSTEIPIWILFFALGASSD 342

Query: 2906 KEIVDTIEVDISDARTVNILLATINNAEKACQA----FSKEGEALKYMDEQIKSTKFPPV 2739
            KE+VD I+ +I DA   NIL+A+I+ A++  +     F ++G A+ ++D+ +KS KFPP 
Sbjct: 343  KEVVDLIDFNIDDAGISNILVASIHEADREAEKKGMYFRRQGNAISFVDKLVKSCKFPPG 402

Query: 2738 EGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXX 2559
            E I+E I KYLFP+ +G KQKA FLGYMVK L   YTGRRKC+NRDDFRNK         
Sbjct: 403  ESIQECISKYLFPNFSGVKQKARFLGYMVKCLLQAYTGRRKCDNRDDFRNKRLELAGELL 462

Query: 2558 XXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKK 2379
                  HI HA+R+M + MQ++LYGDR ++PI+ YLDASIITNGLSRAFSTG W+HPFK+
Sbjct: 463  ERELRVHIRHAERRMVKAMQRELYGDRDLRPIENYLDASIITNGLSRAFSTGQWSHPFKR 522

Query: 2378 SEKIAGVVANLRRLNPLQMTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEK 2199
             E+I+GVVA LRR NPLQMT+D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE 
Sbjct: 523  MERISGVVATLRRTNPLQMTADMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGEN 582

Query: 2198 CGLVKNMAITGLVSTNLMEPLKDKLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDD 2019
            CGLVKN+AITGLVST +++PL DKLF+CGMEKLVDD  S    GK+KVF++GDWVGVC+D
Sbjct: 583  CGLVKNLAITGLVSTEVLDPLVDKLFDCGMEKLVDDT-STKLSGKNKVFLDGDWVGVCED 641

Query: 2018 SLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAKGG 1839
             +SFV +L+  RR K +P QVEIK D + GEVRIFSDAGRILRPLL+VEN+KK+K  KG 
Sbjct: 642  PISFVVELRTKRRHKELPQQVEIKRDEQQGEVRIFSDAGRILRPLLVVENLKKVKTFKGD 701

Query: 1838 -YTFQSLLXXXXXXXXXXXXXXDCQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLSC 1662
             +TFQSLL              DC  AWGIKYL  G  +  P+ YTHCELD+SFLLGLSC
Sbjct: 702  DFTFQSLLDKGIVELIGAEEEEDCSTAWGIKYLLKGH-DDPPVKYTHCELDMSFLLGLSC 760

Query: 1661 GIIPFANHDHARRVLYQSEKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCL 1482
            GIIP+ANHDHARRVLYQSEKHSQQA+GFSTTNPNIRVDTLS QLYYPQRPLFRTMISD  
Sbjct: 761  GIIPYANHDHARRVLYQSEKHSQQAIGFSTTNPNIRVDTLSHQLYYPQRPLFRTMISD-- 818

Query: 1481 GLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRSY 1302
                        L +PEYFNGQ AIVAVNVH GYNQEDSLVMNRASLERGMFR+EHIRSY
Sbjct: 819  ------------LPRPEYFNGQIAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSY 866

Query: 1301 KAEVDNMELFETKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAE 1122
            K+EVDN E  + KR K +D V FGK QSKIGRVDSLDDDGFP+IGANLQ GDIVIGRCAE
Sbjct: 867  KSEVDNNESLDKKR-KSEDSVHFGKMQSKIGRVDSLDDDGFPFIGANLQNGDIVIGRCAE 925

Query: 1121 SGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGL 942
            SG DHSIKLKHTE+G VQKVV++AND+G+NFAVVSLRQ+R+P LGDKFSSMHGQKGV+G 
Sbjct: 926  SGVDHSIKLKHTERGMVQKVVVSANDDGKNFAVVSLRQVRTPCLGDKFSSMHGQKGVLGF 985

Query: 941  LESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSI 762
            LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG +R+ATPF+T S+
Sbjct: 986  LESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGLLRHATPFSTLSV 1045

Query: 761  DEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVH 582
            D I +QLHRAGFSRWG ERVYNG++GEM+RSLIFMGPTFYQRL HMAEDKVK+RNTGPVH
Sbjct: 1046 DAIADQLHRAGFSRWGHERVYNGRTGEMLRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVH 1105

Query: 581  PLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANV 402
            PLTRQPV+DRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSD + MH+C +C NI+NV
Sbjct: 1106 PLTRQPVSDRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDSAYMHICRRCKNISNV 1165

Query: 401  IQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            IQRSV GG  K+RG YCR+C+S+E IVKV++PYGAKLLCQELFSMGI +KF T+ C
Sbjct: 1166 IQRSVAGGR-KVRGPYCRYCESSEEIVKVNVPYGAKLLCQELFSMGISLKFETQLC 1220


>ref|XP_006351506.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1217

 Score = 1617 bits (4187), Expect = 0.0
 Identities = 788/1167 (67%), Positives = 945/1167 (80%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3731 LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 3552
            L E +L  FCK  S  FFE+YGLI+HQI SYN F+ +GIQ++FDS+  I VEPG+DPSK+
Sbjct: 61   LGETYLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 3551 GEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 3372
            G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L PRHARLQNMTYSAR+ V  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSADGGKE-YLDLLPRHARLQNMTYSARIMVET 179

Query: 3371 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 3192
             ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG+DK DC+
Sbjct: 180  HVQVYTKKLVRSDKFKTGVDQFVDKECEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239

Query: 3191 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 3012
            FD GGYF+VKGAEK FIAQEQLCL RLWV  +PTW+V YR      KR+RV I++ +  T
Sbjct: 240  FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGE---KRKRVYIKLTE--T 294

Query: 3011 GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 2832
             + ++  GG+     ++  ++P+W++FFALG+SSD+E+V+ I+VDI D   VNIL+A+I+
Sbjct: 295  LKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIH 354

Query: 2831 NAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMV 2652
             A+K C+ F K  +AL Y+D  IK+ KFPP E +EE I+ YLFP+L+G KQKA FLGYMV
Sbjct: 355  EADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMV 414

Query: 2651 KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPM 2472
            K L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+DLYGDR +
Sbjct: 415  KCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQV 474

Query: 2471 KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQ 2292
            +PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQMT+D+RK+RQQ
Sbjct: 475  QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQ 534

Query: 2291 VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNCG 2112
            V Y GK GDAR+P+PSHWGKLCFLSTPDGE CGLVKN+A  GLVST +++P  + LF CG
Sbjct: 535  VTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCG 594

Query: 2111 MEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRKH 1932
            M+KLVDD  + S  GK KV ++G+WVGVC+DS  FV+ L+  RR   +P QVE+K D   
Sbjct: 595  MQKLVDDC-ATSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQ 653

Query: 1931 GEVRIFSDAGRILRPLLIVENIKKIKLAKGG-YTFQSLLXXXXXXXXXXXXXXDCQIAWG 1755
            GEVRIFSD+GRILRPLL+V N+KKIK  KGG Y FQSLL              DC+ AWG
Sbjct: 654  GEVRIFSDSGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIEFIGPEEEEDCRTAWG 713

Query: 1754 IKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGFS 1575
            ++Y+   +KE  P  YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQA+GFS
Sbjct: 714  VEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFS 773

Query: 1574 TTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVN 1395
            T NPN RVDT + QLYYPQRPLFRTM++D LG P   Q Q G+L +PEYFNGQ AIVAVN
Sbjct: 774  TVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCTQYQKGMLPRPEYFNGQCAIVAVN 833

Query: 1394 VHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQSK 1215
            VH GYNQEDSLVMNRASLERGMFR+EH+RSYKAEVDN E    K+LK++D V+FGK QSK
Sbjct: 834  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSK 892

Query: 1214 IGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQ 1035
            IGRVDSLDDDGFP+IGANLQ+GDI+IG+ AESG DHS+KLKHTE+G VQKV+L+ANDEG+
Sbjct: 893  IGRVDSLDDDGFPFIGANLQSGDIIIGKFAESGADHSVKLKHTERGMVQKVLLSANDEGK 952

Query: 1034 NFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQ 855
            NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQ
Sbjct: 953  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQ 1012

Query: 854  TPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMM 675
            TPGQLLEAALGKGIA GG  +YATPF+T S+D I  QL   GF+RWG+ERVYNG++GEM+
Sbjct: 1013 TPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMV 1072

Query: 674  RSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAH 495
             SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AH
Sbjct: 1073 HSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1132

Query: 494  GASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKV 315
            GA+ANLHERLFTLSD SQMH+C KC N+ANVIQR+VQGG  K+RG +CRFC+S E+IVKV
Sbjct: 1133 GAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG--KVRGPFCRFCESVEDIVKV 1190

Query: 314  SLPYGAKLLCQELFSMGICVKFGTEHC 234
            ++PYGAKLLCQELFSMGI +KF TE C
Sbjct: 1191 NVPYGAKLLCQELFSMGISLKFDTEIC 1217


>ref|XP_004236361.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a [Solanum
            lycopersicum]
          Length = 1217

 Score = 1617 bits (4186), Expect = 0.0
 Identities = 789/1167 (67%), Positives = 944/1167 (80%), Gaps = 1/1167 (0%)
 Frame = -1

Query: 3731 LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 3552
            L E FL  FCK  S  FFE+YGLI+HQI SYN F+ +GIQ++FDS+  I VEPG+DPSK+
Sbjct: 61   LGESFLKNFCKKASTGFFEKYGLISHQINSYNDFINYGIQRVFDSVGEIHVEPGYDPSKR 120

Query: 3551 GEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 3372
            G+G+WK+A+V FGKV L++P FW GEKFS D  KE YL L PRHARLQNMTYSAR+ V  
Sbjct: 121  GDGDWKHASVKFGKVTLERPKFWAGEKFSVDGGKE-YLDLLPRHARLQNMTYSARIMVET 179

Query: 3371 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 3192
             ++VYT+ L+++DKFK+G +  V K+   ED+RDV+IGRIPVMV S +CW+NG+DK DC+
Sbjct: 180  HVQVYTKKLVRSDKFKTGVDRFVDKEWEVEDKRDVLIGRIPVMVNSELCWMNGVDKLDCE 239

Query: 3191 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 3012
            FD GGYF+VKGAEK FIAQEQLCL RLWV  +PTW+V YR      KR+RV I++ +  T
Sbjct: 240  FDHGGYFIVKGAEKTFIAQEQLCLKRLWVSNNPTWMVGYRPGE---KRKRVYIKLTE--T 294

Query: 3011 GEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATIN 2832
             + ++  GG+     ++  ++P+W++FFALG+SSD+E+V+ I+VDI D   VNIL+A+I+
Sbjct: 295  LKLEHIKGGEKALSVYILAEMPIWVLFFALGVSSDREVVNLIDVDIEDTTIVNILVASIH 354

Query: 2831 NAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMV 2652
             A+K C+ F K  +AL Y+D  IK+ KFPP E +EE I+ YLFP+L+G KQKA FLGYMV
Sbjct: 355  EADKNCEDFRKGKKALAYVDRLIKNCKFPPQESVEECINAYLFPNLSGFKQKARFLGYMV 414

Query: 2651 KYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPM 2472
            K L   + GRRK +NRDDFRNK              AHI HA+R+M + MQ+DLYGDR +
Sbjct: 415  KCLLHSFIGRRKVDNRDDFRNKRLELAGELLERELRAHIKHAERRMVKAMQRDLYGDRQV 474

Query: 2471 KPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQ 2292
            +PI++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQMT+D+RK+RQQ
Sbjct: 475  QPIEHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADMRKSRQQ 534

Query: 2291 VGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNCG 2112
            V Y GK GDAR+P+PSHWGKLCFLSTPDGE CGLVKN+A  GLVST +++P  + LF CG
Sbjct: 535  VTYTGKVGDARYPHPSHWGKLCFLSTPDGENCGLVKNLASMGLVSTIILKPFLETLFRCG 594

Query: 2111 MEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRKH 1932
            M+KLVDD  S S  GK KV ++G+WVGVC+DS  FV+ L+  RR   +P QVE+K D   
Sbjct: 595  MQKLVDDC-STSLHGKQKVLLDGEWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDELQ 653

Query: 1931 GEVRIFSDAGRILRPLLIVENIKKIKLAKGG-YTFQSLLXXXXXXXXXXXXXXDCQIAWG 1755
            GEVRIFSD GRILRPLL+V N+KKIK  KGG Y FQSLL              DC+ AWG
Sbjct: 654  GEVRIFSDPGRILRPLLVVSNLKKIKALKGGDYGFQSLLDNGIIELIGPEEEEDCRTAWG 713

Query: 1754 IKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGFS 1575
            ++Y+   +KE  P  YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQSEKHSQQA+GFS
Sbjct: 714  VEYILKADKENPPAKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQAIGFS 773

Query: 1574 TTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVN 1395
            T NPN RVDT + QLYYPQRPLFRTM++D LG P   Q Q G+L +PEYFNGQ AIVAVN
Sbjct: 774  TVNPNNRVDTNTHQLYYPQRPLFRTMLADSLGKPKCAQYQKGMLPRPEYFNGQCAIVAVN 833

Query: 1394 VHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQSK 1215
            VH GYNQEDSLVMNRASLERGMFR+EH+RSYKAEVDN E    K+LK++D V+FGK QSK
Sbjct: 834  VHLGYNQEDSLVMNRASLERGMFRSEHVRSYKAEVDNKEAM-AKKLKIEDSVNFGKTQSK 892

Query: 1214 IGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQ 1035
            IGRVDSLDDDGFP+IGANLQ+GDI+IG+ +ESG DHS+KLKHTE+G VQKV+L+ANDEG+
Sbjct: 893  IGRVDSLDDDGFPFIGANLQSGDIIIGKFSESGADHSVKLKHTERGMVQKVLLSANDEGK 952

Query: 1034 NFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQ 855
            NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQ
Sbjct: 953  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQ 1012

Query: 854  TPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMM 675
            TPGQLLEAALGKGIA GG  +YATPF+T S+D I  QL   GF+RWG+ERVYNG++GEM+
Sbjct: 1013 TPGQLLEAALGKGIALGGGQKYATPFSTLSVDAIMEQLQGRGFTRWGNERVYNGRTGEMV 1072

Query: 674  RSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAH 495
             SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AH
Sbjct: 1073 HSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1132

Query: 494  GASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKV 315
            GA+ANLHERLFTLSD SQMH+C KC N+ANVIQR+VQGG  K+RG +CRFC+S E+IVKV
Sbjct: 1133 GAAANLHERLFTLSDSSQMHICGKCKNMANVIQRTVQGG--KVRGPFCRFCESVEDIVKV 1190

Query: 314  SLPYGAKLLCQELFSMGICVKFGTEHC 234
            ++PYGAKLLCQELFSMGI +KF TE C
Sbjct: 1191 NVPYGAKLLCQELFSMGISLKFDTEIC 1217


>ref|XP_006442883.1| hypothetical protein CICLE_v10018562mg [Citrus clementina]
            gi|568850178|ref|XP_006478802.1| PREDICTED: DNA-directed
            RNA polymerases IV and V subunit 2-like [Citrus sinensis]
            gi|557545145|gb|ESR56123.1| hypothetical protein
            CICLE_v10018562mg [Citrus clementina]
          Length = 1198

 Score = 1608 bits (4165), Expect = 0.0
 Identities = 796/1211 (65%), Positives = 958/1211 (79%), Gaps = 10/1211 (0%)
 Frame = -1

Query: 3836 SPTKVDVFSSFKTSN-GGSVSEKASTSTFTDQEPI-NLSEKFLNKFCKDISVSFFEEYGL 3663
            S  K D+  S K  N  G     +  + F D   + +L E+FL  FC+  +VSFF EYGL
Sbjct: 5    SNAKEDIAMSSKGENISGQDDMDSDDNGFIDPTSLRDLGEEFLKTFCRKAAVSFFNEYGL 64

Query: 3662 INHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVSFGKVMLDKPMFW 3483
            ++HQI SYN+F+++G+QK FDS     VEPG+DPSKKGEGEW+YA++ FG+V LDKP F+
Sbjct: 65   VSHQINSYNEFIKNGLQKAFDSFGETIVEPGYDPSKKGEGEWRYASMRFGQVTLDKPSFF 124

Query: 3482 TGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSV 3303
             G    + D       +FPRHARLQNMTYS+RMKV V+ +VYTQ  + +DKFK+G+E  +
Sbjct: 125  AGNGGDEHD-------MFPRHARLQNMTYSSRMKVKVQFQVYTQKRVTSDKFKTGREQYI 177

Query: 3302 QKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLC 3123
            QK+V+S++  D++IGRIPVMVKS++CW+ G++K DCDFD GGYF++KGAEK F+AQEQ+C
Sbjct: 178  QKEVLSDEATDIIIGRIPVMVKSDLCWMKGVEKGDCDFDHGGYFIIKGAEKVFVAQEQIC 237

Query: 3122 LNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGG-KVLTMHFMSCKIP 2946
            L RLWV  S  W V Y+S+   NKR R+ + + D    ED    GG KVL+++F+S +IP
Sbjct: 238  LKRLWVSNSMGWTVAYKSE---NKRNRLIVRLVDMSKFED--IKGGEKVLSVYFLSTEIP 292

Query: 2945 LWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEGEALKYMDEQ 2766
            +WI+FFALG+SSDKEIV+ I+    D   +NIL A+I++A+  C  F K   ALKY+D+ 
Sbjct: 293  IWILFFALGVSSDKEIVNLIDFTCEDCSILNILFASIHDADNKCDEFRKGRNALKYVDKL 352

Query: 2765 IKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNK 2586
            IK T FPP E  EE ++ YLFP L+G KQKA FLGYMVK L   Y+GRRKC+NRDDFRNK
Sbjct: 353  IKGTTFPPGESTEECMNTYLFPSLHGTKQKARFLGYMVKCLLQAYSGRRKCDNRDDFRNK 412

Query: 2585 XXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFST 2406
                           HI HA+++MA+ +Q+DLYGDR ++PI+YYLDASI+TNGLSRAFST
Sbjct: 413  RLELAGELLERELKVHIAHARKRMAKALQRDLYGDRTVRPIEYYLDASILTNGLSRAFST 472

Query: 2405 GHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLC 2226
            G W+HPFK++E+I+G+VANL R NPLQ   DLR+TRQQV Y GK GDAR+P+PSHWGK+C
Sbjct: 473  GAWSHPFKRTERISGIVANLGRANPLQTLVDLRRTRQQVQYTGKVGDARYPHPSHWGKIC 532

Query: 2225 FLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNCGMEKLVDDAFSASWKGKDKVFVN 2046
            FLSTPDGE CGLVKN+ +TGLVST+++EP+ ++LFN GMEKL DDA S S  GK KVFV+
Sbjct: 533  FLSTPDGENCGLVKNLGVTGLVSTSILEPIFEQLFNSGMEKLADDA-SYSLGGKFKVFVD 591

Query: 2045 GDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENI 1866
            GDW+GVC DSLSFV++L+  RR K +P QVEIK D    EVRIF DAGRILRPLL+VEN+
Sbjct: 592  GDWIGVCKDSLSFVSELRRKRRRKELPTQVEIKRDELQSEVRIFMDAGRILRPLLVVENM 651

Query: 1865 KKIKLAKG-GYTFQSLLXXXXXXXXXXXXXXDCQIAWGIKYLFLGEKEQTPINYTHCELD 1689
             KIK  +G  YTFQ+LL              DC  AWGIKYL    +++ PI +THCELD
Sbjct: 652  GKIKSLEGKNYTFQALLDHGIIELVGTEEEEDCCTAWGIKYLLKDIEDKKPIKFTHCELD 711

Query: 1688 LSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPL 1509
            +SFLLGLSCGIIPFANHDHARRVLYQS+KHS QA+GF TTNP+IRVDTLS QL+YPQRPL
Sbjct: 712  MSFLLGLSCGIIPFANHDHARRVLYQSQKHSSQAIGFPTTNPSIRVDTLSHQLFYPQRPL 771

Query: 1508 FRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGM 1329
            FRTMISDCLG P +  G N +L +PE +NGQNAIVAVNVH GYNQEDSLVMNRASLERGM
Sbjct: 772  FRTMISDCLGKPGY--GHNHILPRPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGM 829

Query: 1328 FRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTG 1149
            FR+EHIRSYKAEVDN E+ + KR    D V+FGK QSKIGRVDSLDDDGFP+IGANLQ G
Sbjct: 830  FRSEHIRSYKAEVDNKEM-QVKRRSSDDMVNFGKIQSKIGRVDSLDDDGFPFIGANLQCG 888

Query: 1148 DIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSM 969
            DIVIG+ A+SG DHSIKLKHTE+G VQKVVL++ND+G+NF+VVSLRQ+RSP LGDKFSSM
Sbjct: 889  DIVIGKYADSGADHSIKLKHTERGMVQKVVLSSNDDGKNFSVVSLRQVRSPCLGDKFSSM 948

Query: 968  HGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIA------C 807
            HGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIA      C
Sbjct: 949  HGQKGVLGFLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIAALGKGIC 1008

Query: 806  GGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNH 627
             G  RYATPF TPS+D IT QLHRAGFS+WG+ER+Y+G++GEM+RSLIF+GPTFYQRL H
Sbjct: 1009 SGLKRYATPFATPSVDAITEQLHRAGFSKWGTERLYDGRTGEMVRSLIFIGPTFYQRLIH 1068

Query: 626  MAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDF 447
            M+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+ANLHERLFTLSD 
Sbjct: 1069 MSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAANLHERLFTLSDS 1128

Query: 446  SQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSM 267
             QMH+C KC N+ANVIQR V GG  K+RG YCR CDS ++IVK ++PYGAKLLCQELFSM
Sbjct: 1129 YQMHICRKCKNVANVIQR-VVGGGRKVRGPYCRICDSGDDIVKANVPYGAKLLCQELFSM 1187

Query: 266  GICVKFGTEHC 234
            GI +KF TE C
Sbjct: 1188 GITLKFDTEFC 1198


>ref|XP_006364477.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Solanum tuberosum]
          Length = 1219

 Score = 1607 bits (4161), Expect = 0.0
 Identities = 785/1168 (67%), Positives = 945/1168 (80%), Gaps = 6/1168 (0%)
 Frame = -1

Query: 3719 FLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGE 3540
            FL  FCK  S  FFE+YG+I+HQI+SYN F+ +GIQ++FDS+  I VEPG+DPSKKGEGE
Sbjct: 63   FLRNFCKKASAGFFEKYGVISHQIDSYNDFIRYGIQRVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 3539 WKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEV 3360
            WK+A+V FGKV LD+P FW GEKFS   N E+YL L+PRHARLQNMTYSAR+ V   ++V
Sbjct: 123  WKHASVKFGKVTLDRPKFWAGEKFSAY-NGEEYLDLWPRHARLQNMTYSARIIVETHVQV 181

Query: 3359 YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQG 3180
            +T+ L+++DKFK+G E  V K+ + ED+RDV IGRIPVMV S +CW++G D+ DCDFD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRPDCDFDHG 241

Query: 3179 GYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQ 3000
            GYF+VKGAEK FIAQEQ+CL RLWV    TW+V YRS     KR RV +++ +  T + +
Sbjct: 242  GYFIVKGAEKIFIAQEQICLKRLWVSNHSTWMVAYRSGE---KRNRVYLKLTE--TLKHE 296

Query: 2999 YFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAE 2823
            +  G  K L+++F++ ++P+W++FFALG+SSD+EIVD I+VDI D   +NIL+A+I++A+
Sbjct: 297  HIKGEAKALSVYFLA-EMPIWVLFFALGVSSDREIVDLIDVDIKDTNIINILVASIHDAD 355

Query: 2822 KACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYL 2643
            K C+ F K  +AL Y+D  IKS KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L
Sbjct: 356  KNCEDFRKGKKALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCL 415

Query: 2642 FLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPI 2463
             L Y GRRK +NRDDFRNK              AHI HA+R+M + +Q+DL GDR ++P+
Sbjct: 416  LLSYIGRRKVDNRDDFRNKRLDLAGELLERELRAHIKHAERRMVKALQRDLCGDRQVQPL 475

Query: 2462 DYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQVGY 2283
            ++YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQMT+DLRKTRQQV Y
Sbjct: 476  EHYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTY 535

Query: 2282 VGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNCGMEK 2103
             GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST +++PL + LF CGM+K
Sbjct: 536  TGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLKPLLETLFRCGMQK 595

Query: 2102 LVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEV 1923
            LVDD+ + S  GK KV ++GDWVGVC+DS  FV+ L+  RR   +P QVE+K D +  EV
Sbjct: 596  LVDDS-ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEV 654

Query: 1922 RIFSDAGRILRPLLIVENIKKIKLAKGG-----YTFQSLLXXXXXXXXXXXXXXDCQIAW 1758
            RIFSDAGRI+RPLL+V N+K IK  K G     Y FQ+LL              DC+ AW
Sbjct: 655  RIFSDAGRIMRPLLVVSNLKNIKSLKDGMKGGDYGFQTLLDKGIIELIGPEEEEDCRTAW 714

Query: 1757 GIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGF 1578
            G++YL   +KE  P+NYTHCELD+SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQA+GF
Sbjct: 715  GVEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGF 774

Query: 1577 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 1398
            ST NPN RVDT + QLYYPQRPLF TM+SD LG P   + Q G+L++PEY+NGQ AIVAV
Sbjct: 775  STVNPNARVDTNTHQLYYPQRPLFGTMLSDSLGKPKCGRHQKGMLSRPEYYNGQCAIVAV 834

Query: 1397 NVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQS 1218
            NVH GYNQEDS+VMNRASLERGMFR+EH+RSYKAEVDN E    K+ KV+D V+FGK QS
Sbjct: 835  NVHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNKEAMG-KKSKVEDSVNFGKTQS 893

Query: 1217 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 1038
            KIGRVDSLDDDGFP+IGANLQ+GDI+IG+ AESG DHS+K+KHTE+G VQKV+L+AND+G
Sbjct: 894  KIGRVDSLDDDGFPFIGANLQSGDIIIGKYAESGADHSVKMKHTERGMVQKVLLSANDDG 953

Query: 1037 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 858
            +NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+R
Sbjct: 954  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSR 1013

Query: 857  QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 678
            QTPGQLLEAALGKGIA GG  +YATPF+  S+D I  QLH  GFSRWGSERVYNG++GEM
Sbjct: 1014 QTPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGSERVYNGRTGEM 1073

Query: 677  MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 498
            + SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+A
Sbjct: 1074 VHSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1133

Query: 497  HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 318
            HGA+ANLHERLFTLSD SQMH+C KC N+ANVIQRS  GG  K+RG +CRFC+S E+IVK
Sbjct: 1134 HGAAANLHERLFTLSDSSQMHICGKCKNMANVIQRSAPGG--KIRGPFCRFCESVEDIVK 1191

Query: 317  VSLPYGAKLLCQELFSMGICVKFGTEHC 234
            V +PYGAKLLCQELFSMGI +KF TE C
Sbjct: 1192 VDVPYGAKLLCQELFSMGISLKFDTEIC 1219


>ref|XP_004245914.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Solanum
            lycopersicum]
          Length = 1219

 Score = 1604 bits (4153), Expect = 0.0
 Identities = 784/1167 (67%), Positives = 937/1167 (80%), Gaps = 5/1167 (0%)
 Frame = -1

Query: 3719 FLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGE 3540
            FL  FCK  S  FFE+YGLI+HQI+SYN F+ +GIQK+FDS+  I VEPG+DPSKKGEGE
Sbjct: 63   FLRNFCKKASAGFFEKYGLISHQIDSYNDFIRYGIQKVFDSVGEIHVEPGYDPSKKGEGE 122

Query: 3539 WKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEV 3360
            WK+A+V FG V+LD+P FW GEK+S   N E+YL ++PRHARLQNMTYSAR+ V   ++V
Sbjct: 123  WKHASVKFGNVILDRPKFWAGEKYSAY-NGEEYLNMWPRHARLQNMTYSARIIVETHVQV 181

Query: 3359 YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQG 3180
            +T+ L+++DKFK+G E  V K+ + ED+RDV IGRIPVMV S +CW++G D+ DC+FD G
Sbjct: 182  FTKKLVRSDKFKTGVEQFVDKECVMEDKRDVFIGRIPVMVNSELCWMSGADRLDCEFDHG 241

Query: 3179 GYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQ 3000
            GYF+VKGAEK FIAQEQ+CL RLWV    TW+V YRS     KR RV +++ +    E Q
Sbjct: 242  GYFIVKGAEKIFIAQEQMCLKRLWVSNHYTWMVAYRSGE---KRNRVYLKLTETLKHE-Q 297

Query: 2999 YFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEK 2820
                 K L+++F++ ++P+W++FFALG+SSD+E+VD I+VDI D + +NIL+A+I++A+K
Sbjct: 298  IKGEAKSLSVYFLA-EMPIWVLFFALGVSSDREVVDLIDVDIKDNKIINILVASIHDADK 356

Query: 2819 ACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYLF 2640
             C+ F K   AL Y+D  IKS KFPP E +EE I +YLFP+L+G KQKA FLGYMVK L 
Sbjct: 357  NCEDFRKGKRALAYVDRLIKSCKFPPQESVEECIKEYLFPNLSGLKQKARFLGYMVKCLL 416

Query: 2639 LCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPID 2460
            L Y GRRK +NRDDFRNK               HI HA+R+M + +Q+DL GDR + PI+
Sbjct: 417  LSYIGRRKVDNRDDFRNKRLDLAGELLERELRVHIKHAERRMVKALQRDLCGDRQVHPIE 476

Query: 2459 YYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQVGYV 2280
            +YLDASIITNGLSRAFSTGHW HP+K+ E+++GVVA LRR NPLQMT+DLRKTRQQV Y 
Sbjct: 477  HYLDASIITNGLSRAFSTGHWCHPYKRMERVSGVVATLRRTNPLQMTADLRKTRQQVTYT 536

Query: 2279 GKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNCGMEKL 2100
            GK GDAR+PNPSHWGK+CFLSTPDGE CGLVKN+A  GLVST ++ PL + LF CGM+KL
Sbjct: 537  GKVGDARYPNPSHWGKVCFLSTPDGENCGLVKNLASMGLVSTTVLMPLLETLFRCGMQKL 596

Query: 2099 VDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEVR 1920
            VDD  + S  GK KV ++GDWVGVC+DS  FV+ L+  RR   +P QVE+K D +  EVR
Sbjct: 597  VDDC-ATSLHGKQKVLLDGDWVGVCEDSALFVSKLRRKRRRNEVPHQVEVKRDEQQDEVR 655

Query: 1919 IFSDAGRILRPLLIVENIKKIKLAKGG-----YTFQSLLXXXXXXXXXXXXXXDCQIAWG 1755
            IFSDAGRI+RPLL+V N+K IK   GG     Y FQ+LL              DC+ AWG
Sbjct: 656  IFSDAGRIMRPLLVVSNLKNIKALNGGVKGGDYGFQTLLDKGIIELIGPEEEEDCRTAWG 715

Query: 1754 IKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGFS 1575
            ++YL   +KE  P+NYTHCELD+SFLLGLSCG+IPFANHDHARRVLYQSEKHSQQA+GFS
Sbjct: 716  VEYLLKADKENPPVNYTHCELDMSFLLGLSCGLIPFANHDHARRVLYQSEKHSQQAIGFS 775

Query: 1574 TTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVN 1395
            T NPNIRVDT + QLYYPQRPLF TM+SD LG P   + Q G+L++PEY+NGQ AIVAVN
Sbjct: 776  TVNPNIRVDTNTHQLYYPQRPLFGTMLSDSLGKPKCARHQRGMLSRPEYYNGQCAIVAVN 835

Query: 1394 VHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQSK 1215
            VH GYNQEDS+VMNRASLERGMFR+EH+RSYKAEVDNME    K+ K +D V+FGK QSK
Sbjct: 836  VHLGYNQEDSVVMNRASLERGMFRSEHVRSYKAEVDNMEA-TGKKSKAEDSVNFGKTQSK 894

Query: 1214 IGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQ 1035
            IGRVD LDDDG PYIGANLQ+GDI+IG+ AESG DHS+K+KHTEKG VQKV+L+ANDEG+
Sbjct: 895  IGRVDCLDDDGLPYIGANLQSGDIIIGKFAESGADHSVKMKHTEKGMVQKVLLSANDEGK 954

Query: 1034 NFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQ 855
            NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+RQ
Sbjct: 955  NFAVVSLRQVRSPCLGDKFSSMHGQKGVLGYLESQENFPFTVQGIVPDIVINPHAFPSRQ 1014

Query: 854  TPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMM 675
            TPGQLLEAALGKGIA GG  +YATPF+  S+D I  QLH  GFSRWG+ERVYNG++GEM+
Sbjct: 1015 TPGQLLEAALGKGIALGGGEKYATPFSALSVDAILKQLHGRGFSRWGNERVYNGRTGEMV 1074

Query: 674  RSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAH 495
             SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AH
Sbjct: 1075 HSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAH 1134

Query: 494  GASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKV 315
            GA+ANLHERLFTLSD SQMH+C KC N+ANVIQR V GG  K+RG +CRFC+S E+IVKV
Sbjct: 1135 GAAANLHERLFTLSDSSQMHICGKCKNMANVIQRPVPGG--KVRGPFCRFCESVEDIVKV 1192

Query: 314  SLPYGAKLLCQELFSMGICVKFGTEHC 234
             +PYGAKLLCQELFSMGI +KF TE C
Sbjct: 1193 GVPYGAKLLCQELFSMGISLKFDTEIC 1219


>ref|XP_007011717.1| DNA-directed RNA polymerase isoform 1 [Theobroma cacao]
            gi|508782080|gb|EOY29336.1| DNA-directed RNA polymerase
            isoform 1 [Theobroma cacao]
          Length = 1184

 Score = 1601 bits (4145), Expect = 0.0
 Identities = 780/1168 (66%), Positives = 940/1168 (80%), Gaps = 2/1168 (0%)
 Frame = -1

Query: 3731 LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 3552
            L E+FL  FCK  +VSFF+EYGLI+HQ+ SYN F+++G+Q  FDS     +  G+DPSKK
Sbjct: 32   LGEEFLRGFCKQAAVSFFKEYGLISHQLNSYNAFIKYGLQNTFDSFGEFLIHSGYDPSKK 91

Query: 3551 GEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 3372
            GEG+W++A V FGKV +++P FW     ++       L + PRHARLQNMTYS+RMKV+V
Sbjct: 92   GEGDWRHARVRFGKVTVERPTFWAVSGGNE-------LNMLPRHARLQNMTYSSRMKVNV 144

Query: 3371 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 3192
             L+VYT   +K+DKFK+G+E  V+++V+ +D RD++IGRIPVMV+S++CW+N ++K DCD
Sbjct: 145  DLQVYTAKSVKSDKFKTGREEFVEEEVVYQDNRDIIIGRIPVMVRSDLCWMNEVEKADCD 204

Query: 3191 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 3012
            FD GGYF++KG EK FIAQEQ+ + RLW+  S  W + YRS+    KR R+ I + +   
Sbjct: 205  FDHGGYFLIKGTEKIFIAQEQISMKRLWISNSQGWTIAYRSEV---KRNRLIIRLVE--N 259

Query: 3011 GEDQYFHGG-KVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 2835
             + +Y  GG KVLT++F+S +IP+W++FFALG+SSDKE+V+ I+ + +D+   NIL A+I
Sbjct: 260  SKVEYIKGGEKVLTVYFLSTEIPVWVLFFALGVSSDKEVVNLIDYESNDSSITNILFASI 319

Query: 2834 NNAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYM 2655
             NA+  C  F +   A+ Y+ + +K T+FPP EGIEE +  YLFP L   KQKA FLGYM
Sbjct: 320  RNADGKCYKFCQGRNAIDYVGKLVKDTRFPPEEGIEECLSTYLFPTLRSFKQKARFLGYM 379

Query: 2654 VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRP 2475
            VK L   YTGR KC+NRDDFRNK               HI HA+R+MA+ +Q+DLY DR 
Sbjct: 380  VKCLLQAYTGRLKCDNRDDFRNKRLELAGELLERELKVHIAHARRRMAKTLQRDLYADRT 439

Query: 2474 MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQ 2295
            ++PI++YLDASI+TNGLSRAFSTG W+HP+K+ E+I+GVVANL R NPLQ   DLRKTRQ
Sbjct: 440  VRPIEHYLDASIVTNGLSRAFSTGAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRQ 499

Query: 2294 QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNC 2115
            QV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A TGLVSTN+ME + DKLF+ 
Sbjct: 500  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNIMESIVDKLFDS 559

Query: 2114 GMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRK 1935
            GME+LV+D  S S  GKDKVF+NG+WVGVC+DSLSF  +++  RRSK  P QVEIK D  
Sbjct: 560  GMEELVNDTCS-SLDGKDKVFLNGEWVGVCEDSLSFAAEVRRKRRSKEFPHQVEIKRDEH 618

Query: 1934 HGEVRIFSDAGRILRPLLIVENIKKIKLAKG-GYTFQSLLXXXXXXXXXXXXXXDCQIAW 1758
             GEVRIFSD GRILRPLL+V+N+ +IK  KG  YTFQ+LL              DC+ AW
Sbjct: 619  KGEVRIFSDGGRILRPLLVVDNLNRIKAFKGENYTFQALLEGGIIELVGTEEEEDCRTAW 678

Query: 1757 GIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGF 1578
             IKYL    + + P+ YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQA+GF
Sbjct: 679  SIKYLLTDVEGKQPVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 738

Query: 1577 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 1398
            STTNPNIRVDTLS QLYYPQRPLFRTM SDCLG    P GQ GVL KPE +NGQNAIVAV
Sbjct: 739  STTNPNIRVDTLSHQLYYPQRPLFRTMTSDCLGKLGHPLGQKGVLPKPELYNGQNAIVAV 798

Query: 1397 NVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQS 1218
            NVH GYNQEDSLVMNR+SLERGMFR+EH+RSYKAEVDN E+ + KR K +D V+FGK QS
Sbjct: 799  NVHLGYNQEDSLVMNRSSLERGMFRSEHVRSYKAEVDNKEI-QDKRRKSEDIVNFGKIQS 857

Query: 1217 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 1038
            KIGRVDSLDDDGFPY+GANLQ GDIVIGRCAESG DHSIKLKHTE+G VQKVVL++ND+G
Sbjct: 858  KIGRVDSLDDDGFPYVGANLQCGDIVIGRCAESGADHSIKLKHTERGMVQKVVLSSNDDG 917

Query: 1037 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 858
            +N+AVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+R
Sbjct: 918  KNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTTQGIVPDIVINPHAFPSR 977

Query: 857  QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 678
            QTPGQLLEAALGKGIACGGS++YATPF+T S+D IT QLHRAGFSRWG+ERVYNG++GEM
Sbjct: 978  QTPGQLLEAALGKGIACGGSMKYATPFSTISVDAITEQLHRAGFSRWGNERVYNGRTGEM 1037

Query: 677  MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 498
            +RSLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKR+GG+KFGEMERDCL+A
Sbjct: 1038 VRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRYGGIKFGEMERDCLIA 1097

Query: 497  HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 318
            HGASANLHERL TLSD SQMHVC  C N+ANVI+R+V GG  K+RG YCR C S ++IV+
Sbjct: 1098 HGASANLHERLVTLSDSSQMHVCRNCKNVANVIERAVPGGR-KIRGPYCRGCQSVDDIVR 1156

Query: 317  VSLPYGAKLLCQELFSMGICVKFGTEHC 234
            V++PYGAKLLCQELFSMGI +KF T+ C
Sbjct: 1157 VNVPYGAKLLCQELFSMGINLKFETQLC 1184


>ref|XP_007225442.1| hypothetical protein PRUPE_ppa000410mg [Prunus persica]
            gi|462422378|gb|EMJ26641.1| hypothetical protein
            PRUPE_ppa000410mg [Prunus persica]
          Length = 1200

 Score = 1582 bits (4095), Expect = 0.0
 Identities = 782/1173 (66%), Positives = 937/1173 (79%), Gaps = 6/1173 (0%)
 Frame = -1

Query: 3734 NLSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSK 3555
            +L E FL  FCK+ +++FF EYGLI+HQI SYN F+++GIQ++FDS   I VEPG+DPSK
Sbjct: 45   DLGEGFLKFFCKEAAIAFFNEYGLISHQINSYNDFIKNGIQRVFDSFGEIIVEPGYDPSK 104

Query: 3554 KGEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVS 3375
            KGE EW+YA+V FGKV L  P FW G     DD KE   K+ PRHARLQNM+Y+++MKV+
Sbjct: 105  KGESEWRYASVKFGKVTLGMPSFWGGS----DDEKE--YKMLPRHARLQNMSYASKMKVN 158

Query: 3374 VKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDC 3195
            + +EVYTQ L+ +DKFK+GK   + KQ++S D RD++IG +PVMVKS++CW+   +K DC
Sbjct: 159  ITVEVYTQKLVSSDKFKTGKSQYLDKQILSTDTRDIIIGSVPVMVKSDLCWMKDFEKGDC 218

Query: 3194 DFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAP 3015
            DFD GGYF++KGAEK FIAQEQ CL RL +  +    V YRS+    KR R+ I +    
Sbjct: 219  DFDHGGYFIIKGAEKTFIAQEQSCLKRLLITNNQGLTVAYRSEV---KRHRLIIRLVGIS 275

Query: 3014 TGEDQYFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLAT 2838
              E+    G  KVLT++FMS +IP+WI FFALG+SSD+E+++ I+ D  DA   NIL A+
Sbjct: 276  KLEN--IEGVEKVLTVYFMSTEIPVWIWFFALGVSSDREVMNLIDYDSEDASISNILFAS 333

Query: 2837 INNAEKACQ----AFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAV 2670
            I +A+K        F +   ALKY+DE I+ T FPP E +EE I  YLFP+L G KQKA 
Sbjct: 334  IRDADKLNDKVDGGFRRGKNALKYVDEVIRKTAFPPGESMEECISLYLFPNLKGLKQKAR 393

Query: 2669 FLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDL 2490
            FLGYMVK L   Y GRRKC+NRDDFRNK              AHI HA+R+MA+ +Q+DL
Sbjct: 394  FLGYMVKSLLQAYAGRRKCDNRDDFRNKRLDLAGELLERELKAHIGHARRRMAKALQRDL 453

Query: 2489 YGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDL 2310
            YGDR ++PI++YLDASI+TNG+SRAFSTG W HPFK+ E+++GVVA + R NPLQ   D+
Sbjct: 454  YGDRAVRPIEHYLDASIVTNGISRAFSTGAWCHPFKRMERMSGVVATVGRANPLQTMVDM 513

Query: 2309 RKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKD 2130
            RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A TGLVSTN++E L  
Sbjct: 514  RKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTGLVSTNVLESLIP 573

Query: 2129 KLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEI 1950
            +L  CGMEKLVDD F+ S +GKDKVF+NGDWVGVC+DSLSFV +L+  RR K +P QVEI
Sbjct: 574  QLLTCGMEKLVDDTFT-SLRGKDKVFLNGDWVGVCEDSLSFVLELRRMRRRKKLPHQVEI 632

Query: 1949 KWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAKGGYT-FQSLLXXXXXXXXXXXXXXD 1773
            K D   GEVRIFSDAGRILRPLL+VEN+ K+K +KGG + FQ  L              D
Sbjct: 633  KRDVHQGEVRIFSDAGRILRPLLVVENLNKVKASKGGKSSFQYFLDNGIIELIGAEEEED 692

Query: 1772 CQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQ 1593
            C  AWGIKYLF+ +K ++   +THCELD+SFLLGLSCGIIP+ANHDHARRVLYQ++KHSQ
Sbjct: 693  CSTAWGIKYLFMEDKGKSATKFTHCELDMSFLLGLSCGIIPYANHDHARRVLYQAQKHSQ 752

Query: 1592 QALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQN 1413
            QA+GFSTTNPN+RVDTLS QL+YPQRPLF+TM SDCLG P      N ++ KPEY+NGQN
Sbjct: 753  QAIGFSTTNPNLRVDTLSHQLHYPQRPLFQTMTSDCLGKPG---RHNRIVPKPEYYNGQN 809

Query: 1412 AIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDF 1233
            AIVAVNVH G+NQEDS+VMNRASLERGMFR+EHIRSYKAEVDN E  + KR K  D V+F
Sbjct: 810  AIVAVNVHLGFNQEDSIVMNRASLERGMFRSEHIRSYKAEVDNKESLD-KRRKPDDCVNF 868

Query: 1232 GKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLT 1053
            GK QSK GRVDSLDDDGFPY+GANLQ+GDI+IGRC+ESG DHSIKLKHTE+G VQKV+L+
Sbjct: 869  GKMQSKFGRVDSLDDDGFPYVGANLQSGDIIIGRCSESGADHSIKLKHTERGMVQKVLLS 928

Query: 1052 ANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPH 873
            +ND+G+NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QG+VPDIVINPH
Sbjct: 929  SNDDGKNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPH 988

Query: 872  AFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNG 693
            AFP+RQTPGQLLEAALGKGIACGGS RYATPF+T S+D+IT+QLH AGFSRWG+ERVYNG
Sbjct: 989  AFPSRQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHSAGFSRWGNERVYNG 1048

Query: 692  QSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMER 513
             +G M+RSLIFMGPTFYQRL HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMER
Sbjct: 1049 ATGAMVRSLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMER 1108

Query: 512  DCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSA 333
            DCL+AHGASANLHERLFTLSD SQMHVC KC N+A VI R+V GG  K+RG +CR CDSA
Sbjct: 1109 DCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVAYVILRTVAGGR-KIRGPHCRICDSA 1167

Query: 332  ENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            +++V+V++PYGAKLLCQELFSMGI +KF T  C
Sbjct: 1168 DDLVRVNVPYGAKLLCQELFSMGISLKFETRFC 1200


>ref|XP_002515428.1| DNA-directed RNA polymerase subunit, putative [Ricinus communis]
            gi|223545372|gb|EEF46877.1| DNA-directed RNA polymerase
            subunit, putative [Ricinus communis]
          Length = 1203

 Score = 1579 bits (4089), Expect = 0.0
 Identities = 785/1205 (65%), Positives = 943/1205 (78%), Gaps = 1/1205 (0%)
 Frame = -1

Query: 3845 LFDSPTKVDVFSSFKTSNGGSVSEKASTSTFTDQEPINLSEKFLNKFCKDISVSFFEEYG 3666
            LF + T +D+   F + +G       S+++ TD     + E  L  FC   +  FF EYG
Sbjct: 23   LFKASTDMDI--DFDSDSGSDCDFMDSSTSLTD-----IGEAKLKDFCNKAATLFFNEYG 75

Query: 3665 LINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVSFGKVMLDKPMF 3486
            LI+HQI SYN F+ +GIQK FDS   + VEPG+DPSKKGE EW+YA+V FGKV L+KP F
Sbjct: 76   LISHQINSYNDFINNGIQKAFDSFGELVVEPGYDPSKKGENEWRYASVKFGKVALEKPTF 135

Query: 3485 WTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHS 3306
            W+G     D++K     + PRHARLQNMTYS++MKV+V +EVYT+ ++++DKFK+GK+  
Sbjct: 136  WSGA----DEHK-----MLPRHARLQNMTYSSKMKVNVSVEVYTRKVVRSDKFKTGKDQY 186

Query: 3305 VQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQL 3126
            V K+V++ D R++ IG +PVMVKS++CW+   +K DCDFD GGYF++KGAEK FIAQEQ+
Sbjct: 187  VDKEVLNTDNRNITIGSLPVMVKSDLCWMKTAEKGDCDFDHGGYFLIKGAEKVFIAQEQI 246

Query: 3125 CLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIP 2946
            CL RLW+     W V Y+S+    KR R+ + +      ED      K LT++F+S +IP
Sbjct: 247  CLKRLWISNIQGWTVSYKSEI---KRNRLIVRLVGLSALEDVKAEK-KCLTVYFLSTEIP 302

Query: 2945 LWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEGEALKYMDEQ 2766
            LWI+FFALG++SDKE++D I    +DAR VNI  A+I++A++  + F +  EAL+Y+  Q
Sbjct: 303  LWILFFALGVTSDKEVIDLIGYGSNDARIVNIFFASIHDADEKTEGFRRGKEALEYVVRQ 362

Query: 2765 IKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNK 2586
            I+ T+FPP E  E+    YLFP L+  +QKA FLGYMVK L   Y G+RKC N D FRNK
Sbjct: 363  IRGTRFPPGEN-EDFFLLYLFPTLHSLRQKARFLGYMVKCLLQAYNGQRKCNNWDSFRNK 421

Query: 2585 XXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFST 2406
                           HI HA+R+MA+ +QKDLYGDR ++PI++YLDASI+TNGLSRAFST
Sbjct: 422  RFELAKELLERELKVHIAHARRRMAKALQKDLYGDRDVRPIEHYLDASIVTNGLSRAFST 481

Query: 2405 GHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLC 2226
            G W+HP+K+ E+I+GVVANL R NPLQ   DLRKTR  V Y GK GDARFP+PSHWG++C
Sbjct: 482  GAWSHPYKRMERISGVVANLGRANPLQTMVDLRKTRYHVQYTGKVGDARFPHPSHWGRVC 541

Query: 2225 FLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNCGMEKLVDDAFSASWKGKDKVFVN 2046
            FLSTPDGE CGLVKN+A TGLVS N++EPL DKL   GMEK+ +D+ S     KDKVF+N
Sbjct: 542  FLSTPDGENCGLVKNLATTGLVSVNILEPLIDKLIARGMEKVPEDSHS-DLDEKDKVFLN 600

Query: 2045 GDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENI 1866
            G+WVGVC+DS  FV +L+  RR K +P QVEIK D +  EVRIFSDAGRILRPLL+V+N+
Sbjct: 601  GEWVGVCEDSRLFVAELRRLRRRKKLPQQVEIKRDEQQQEVRIFSDAGRILRPLLVVQNL 660

Query: 1865 KKIKLAKGGY-TFQSLLXXXXXXXXXXXXXXDCQIAWGIKYLFLGEKEQTPINYTHCELD 1689
             KI+  KGG  TFQSLL              DC  AWGIK+L  G   +  + YTHCELD
Sbjct: 661  HKIEAFKGGNCTFQSLLDKGIIEFVGTEEEEDCSTAWGIKFLLSGVDGKQSLKYTHCELD 720

Query: 1688 LSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPL 1509
            +SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQA+GF TTNPNIRVDTLS QLYYPQRPL
Sbjct: 721  MSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPNIRVDTLSHQLYYPQRPL 780

Query: 1508 FRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGM 1329
            FRT+ SDCLG P   +G NG++ KPE +NGQNAIVAVNVH GYNQEDSLVMNRASLERGM
Sbjct: 781  FRTVTSDCLGKPGDTRGHNGIVPKPELYNGQNAIVAVNVHLGYNQEDSLVMNRASLERGM 840

Query: 1328 FRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTG 1149
            FR+EHIRSYKA+VDN EL + KR K  D V+FGK  SKIGRVDSLDDDGFP+IGANLQ+G
Sbjct: 841  FRSEHIRSYKADVDNKELLD-KRRKYDDNVNFGKIPSKIGRVDSLDDDGFPFIGANLQSG 899

Query: 1148 DIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSM 969
            DIVIGRCAESG DHSIKLKHTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP LGDKFSSM
Sbjct: 900  DIVIGRCAESGPDHSIKLKHTERGMVQKVVLSSNDEGKNFAVVSLRQVRSPCLGDKFSSM 959

Query: 968  HGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRY 789
            HGQKGV+G LESQENFPFT QGIVPDIVINPH+FP+RQTPGQLLEAALGKGIACGGS++Y
Sbjct: 960  HGQKGVLGFLESQENFPFTRQGIVPDIVINPHSFPSRQTPGQLLEAALGKGIACGGSMKY 1019

Query: 788  ATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKV 609
            ATPF+T S++ ITNQLHRAGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQRL HMAEDKV
Sbjct: 1020 ATPFSTLSVEAITNQLHRAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLIHMAEDKV 1079

Query: 608  KYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVC 429
            K+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGASANLHERLFTLSD SQMH+C
Sbjct: 1080 KFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGASANLHERLFTLSDSSQMHIC 1139

Query: 428  NKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGICVKF 249
             KC N+ANVIQR+V GG  K+RG YCR C+S + IVKV++PYGAKLLCQELFSMGI +KF
Sbjct: 1140 QKCKNVANVIQRAVPGGR-KIRGPYCRVCESVDEIVKVNVPYGAKLLCQELFSMGISLKF 1198

Query: 248  GTEHC 234
             T  C
Sbjct: 1199 ETRLC 1203


>ref|XP_004288915.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Fragaria
            vesca subsp. vesca]
          Length = 1201

 Score = 1578 bits (4086), Expect = 0.0
 Identities = 779/1169 (66%), Positives = 933/1169 (79%), Gaps = 2/1169 (0%)
 Frame = -1

Query: 3734 NLSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSK 3555
            +L E FL++FCK+ SVSFF+EYGL++HQI SYN FVE+GIQ++FDS   I VEP FDPSK
Sbjct: 48   DLGEVFLDEFCKEASVSFFKEYGLLSHQINSYNDFVENGIQRVFDSFGEIVVEPNFDPSK 107

Query: 3554 KGEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVS 3375
            KG  +W++A + FGKV L KP FW G    K+ N      + PRHARLQNMTYSARM V+
Sbjct: 108  KGNADWRFAAIKFGKVTLSKPCFWGGSDSDKEYN------MLPRHARLQNMTYSARMSVN 161

Query: 3374 VKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDC 3195
            + ++VYTQNL+++DKFK+G E  ++K  +S D RD++IGRIPVMVKSN+CW+ G++K DC
Sbjct: 162  ITVQVYTQNLVESDKFKTGTEQLLEKTTLSTDSRDIIIGRIPVMVKSNLCWMKGVEKGDC 221

Query: 3194 DFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAP 3015
            +FDQGGYF++ GAEK FIAQEQ CL RL +  S    V YRS+    KR R+ I +    
Sbjct: 222  EFDQGGYFIINGAEKTFIAQEQSCLKRLLITNSQGLTVAYRSEV---KRHRLIIRLSGIS 278

Query: 3014 TGEDQYFHG-GKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLAT 2838
              E+    G  KVL+++FMS +IP+WI FFALG+SSDKE++D I+  I DA   NIL A+
Sbjct: 279  KLEN--VEGVEKVLSVYFMSTEIPVWIWFFALGVSSDKEVIDLIDYGIEDASISNILFAS 336

Query: 2837 INNAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGY 2658
            I +A++    F +   AL+Y++  IKST FPP E +E+ I  YLFP++ G KQKA FLGY
Sbjct: 337  IRDADERKDDFRRGNNALRYVENAIKSTTFPPGESVEDCISMYLFPNMRGLKQKARFLGY 396

Query: 2657 MVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDR 2478
            MVK L     G RKC+NRDDFRNK              AH++HA+RKMA+ +Q+DL GD 
Sbjct: 397  MVKCLLQTSIGLRKCDNRDDFRNKRLELAGELLERELKAHVSHARRKMAKALQRDLGGDH 456

Query: 2477 PMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTR 2298
             ++P+++YLDASI+TNG+SRAFSTG W HPFK+ E+I+GVVAN+ R NPLQ   D+RKTR
Sbjct: 457  VVRPVEHYLDASIVTNGVSRAFSTGAWCHPFKRMERISGVVANIGRANPLQTMIDMRKTR 516

Query: 2297 QQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFN 2118
            QQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A T LVS N+ EP+  KLF 
Sbjct: 517  QQVQYTGKAGDARYPHPSHWGKVCFLSTPDGENCGLVKNLATTALVSINISEPILPKLFK 576

Query: 2117 CGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDR 1938
            CG+E+LVDD ++ S  GK KVF+NGDWVG+C DS  FVT L+  RRSK +P QVEIK D 
Sbjct: 577  CGIEELVDDTYT-SLAGKHKVFLNGDWVGICVDSHGFVTKLRRLRRSKKLPHQVEIKRDE 635

Query: 1937 KHGEVRIFSDAGRILRPLLIVENIKKIKLAKGG-YTFQSLLXXXXXXXXXXXXXXDCQIA 1761
              GEVRIFSDAGRILRPLL+V+ +KKIK AKG  +TFQ  L              DC+ A
Sbjct: 636  HKGEVRIFSDAGRILRPLLVVQGLKKIKAAKGEKHTFQDFLDKGIIEFIGAEEEEDCRTA 695

Query: 1760 WGIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALG 1581
            W IKYLF+ E++ + + YTHCELD+SFLLGLSCGIIPFANHDHARRVLYQS+KHSQQA+G
Sbjct: 696  WAIKYLFM-EEQGSVVKYTHCELDMSFLLGLSCGIIPFANHDHARRVLYQSQKHSQQAIG 754

Query: 1580 FSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVA 1401
            +STTNPN+RVDTLS  L+YPQRPLFRTMI+D LG P +P G NG + KPEYFNGQNAIVA
Sbjct: 755  YSTTNPNLRVDTLSHNLHYPQRPLFRTMIADSLGKPGYPVGHNGFMPKPEYFNGQNAIVA 814

Query: 1400 VNVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQ 1221
            VNVH GYNQEDS+VMNRASLERGMFR+EHIRSYKAEV+N    E KR K  + V+FGK Q
Sbjct: 815  VNVHLGYNQEDSIVMNRASLERGMFRSEHIRSYKAEVENKLSLE-KRRKPDECVNFGKIQ 873

Query: 1220 SKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDE 1041
            SK GRVD+LDDDGFP +GA+LQ+GDI+IGRC+ESGTDHSIKLKHTE+G VQKVVL++ND 
Sbjct: 874  SKFGRVDNLDDDGFPCVGASLQSGDIIIGRCSESGTDHSIKLKHTERGMVQKVVLSSNDA 933

Query: 1040 GQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPT 861
            G+NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LE QENFPFT QGIVPDIVINPHAFP+
Sbjct: 934  GKNFAVVSLRQVRSPSLGDKFSSMHGQKGVLGFLEYQENFPFTIQGIVPDIVINPHAFPS 993

Query: 860  RQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGE 681
            RQTPGQLLEAALGKGIACGGS RYATPF+T S+D+IT+QLHRAGFSRWG+ERVYNG++GE
Sbjct: 994  RQTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDITDQLHRAGFSRWGNERVYNGRTGE 1053

Query: 680  MMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL 501
            M+R LIFMGPTFYQRL HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+
Sbjct: 1054 MVRQLIFMGPTFYQRLIHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 1113

Query: 500  AHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIV 321
            AHGASANLHERLFTLSD S M+VC KC N ANVI+R + GG  K+RG YCR CDSA++IV
Sbjct: 1114 AHGASANLHERLFTLSDSSLMNVCQKCQNAANVIERKLTGGR-KIRGPYCRVCDSADDIV 1172

Query: 320  KVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            +V++PYGAKLLCQELFSMGI +KF T  C
Sbjct: 1173 RVNVPYGAKLLCQELFSMGISLKFETRLC 1201


>gb|EYU29217.1| hypothetical protein MIMGU_mgv1a000367mg [Mimulus guttatus]
          Length = 1211

 Score = 1567 bits (4057), Expect = 0.0
 Identities = 773/1224 (63%), Positives = 942/1224 (76%), Gaps = 3/1224 (0%)
 Frame = -1

Query: 3896 EEAQPANVDEMEVDLSSLFDSPTKVDVFSSFKTSNGGSVSEKASTSTFTDQEPINLSEKF 3717
            EEA P++ ++         +  T++D+    +  +  S  E        D     LSE F
Sbjct: 8    EEAGPSSKND------KFSNGTTQMDIDEDIEFDSSESEDE-------LDTAMQELSEGF 54

Query: 3716 LNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEW 3537
            L   C+  S +FF++YGLI+HQI SYN FV HGIQK+FDSI  I VEPG+DPSKKGEG+W
Sbjct: 55   LKVSCRKASTAFFDQYGLISHQINSYNDFVNHGIQKVFDSIGEIVVEPGYDPSKKGEGDW 114

Query: 3536 KYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVKLEVY 3357
            K A + FGKV L++P FWTGEKFS  D  + YL+L PRHARLQNMTY+A++KV   L+VY
Sbjct: 115  KRACLKFGKVTLERPTFWTGEKFSSVDGAKDYLELLPRHARLQNMTYAAKIKVETHLQVY 174

Query: 3356 TQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGG 3177
            T+ L ++DKF +G E++V+K +++E   +V  GR+PVMVKS++CW+  LDK DC+FDQGG
Sbjct: 175  TKGLNRSDKFTTGVENTVEKTLLNEYHNEVNFGRLPVMVKSDLCWMKSLDKKDCEFDQGG 234

Query: 3176 YFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTGEDQY 2997
            YFV+KGAEK FIAQEQLCL RLWV + P+W V YR    V +R RV I++   P  E   
Sbjct: 235  YFVIKGAEKTFIAQEQLCLKRLWVTKIPSWTVSYRP---VARRNRVYIKL--VPKME-HV 288

Query: 2996 FHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINNAEKA 2817
                K+LT++F   +I +W++FFALG+ +DKE+V  I++DI D+   NIL+A+I +A+K 
Sbjct: 289  IGADKILTVYFYVTEISVWVLFFALGIPNDKEVVKLIDLDIEDSDIANILIASIYDADKK 348

Query: 2816 CQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYLFL 2637
             + F KEG + K++ E +++ KFPP E IE++I  YLFPHL  P QKA FLGYMVK L  
Sbjct: 349  YEGFRKEGNSSKHIKELMQNCKFPPTESIEDLIKNYLFPHLKTPIQKACFLGYMVKCLLE 408

Query: 2636 CYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDY 2457
             Y GRRK ENRDDFRNK               HI HA+R+M + MQ+DLY DR ++ ID 
Sbjct: 409  AYKGRRKVENRDDFRNKRLELAGELLERELRVHIKHAERRMTKAMQRDLYRDREVQSIDQ 468

Query: 2456 YLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQVGYVG 2277
            YLDASI+TNGLSRAFSTG W HPFK+ E+ +GVVA +RR NPLQ  +D+RKTRQQV Y G
Sbjct: 469  YLDASIVTNGLSRAFSTGAWCHPFKRMERTSGVVATIRRTNPLQAIADMRKTRQQVSYTG 528

Query: 2276 KGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEP--LKDKLFNCGMEK 2103
            + GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVSTNL+    L  K   CGMEK
Sbjct: 529  RVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLASLGLVSTNLLAQGNLLKKFQQCGMEK 588

Query: 2102 LVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEV 1923
            +VDD  S    GK KVF++GDW+G+C DS SFV+ L+  RR   IP Q+EIK D+ +GEV
Sbjct: 589  MVDDT-SNLLGGKHKVFLDGDWIGICKDSSSFVSKLRRKRRRMEIPHQMEIKRDQHNGEV 647

Query: 1922 RIFSDAGRILRPLLIVENIKKIKLAKGGYTFQSLLXXXXXXXXXXXXXXDCQIAWGIKYL 1743
            RIF+D+GRILRPLL+V+N+KKIK  KG ++FQSLL              DCQ AWG++YL
Sbjct: 648  RIFNDSGRILRPLLVVQNLKKIKDLKGNFSFQSLLDNGIIELIGAEEEEDCQTAWGVRYL 707

Query: 1742 FLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGFSTTNP 1563
            F  E E  P+ YTHCELD SFLLGLSCGI+PF NHDHARRVLYQSEKHSQQA+G+STTN 
Sbjct: 708  FTAELENPPVKYTHCELDSSFLLGLSCGIVPFTNHDHARRVLYQSEKHSQQAIGYSTTNS 767

Query: 1562 NIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHG 1383
             IRVDT S  LYYPQRPLFRT++SD LG   F     G++ +PE++NGQ AIVA+NVH G
Sbjct: 768  IIRVDTNSHSLYYPQRPLFRTVLSDSLGRSTFSDHYKGMIPRPEFYNGQCAIVAINVHLG 827

Query: 1382 YNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQSKIGRV 1203
            YNQEDSLVMNR+SLERGMFRTEH+RS+KA+V+N E    K++K+ + V FGK QSKIGRV
Sbjct: 828  YNQEDSLVMNRSSLERGMFRTEHVRSFKADVENSEAVGGKKVKMDEMVSFGKMQSKIGRV 887

Query: 1202 DSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAV 1023
            DSL+DDGFPYIGANLQTGDIVIG+ A +G DHSIKLKHTEKG V KVVL+ANDEG+NFAV
Sbjct: 888  DSLEDDGFPYIGANLQTGDIVIGKHAATGVDHSIKLKHTEKGMVHKVVLSANDEGKNFAV 947

Query: 1022 VSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQ 843
            VSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPF+ QGIVPDIVINPHAFP+RQTPGQ
Sbjct: 948  VSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFSQQGIVPDIVINPHAFPSRQTPGQ 1007

Query: 842  LLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLI 663
            LLEAALGKGIA GG ++YATPF++PS+++IT QLHR GFSRWG ERVY+G++GE + SLI
Sbjct: 1008 LLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRWGGERVYDGRTGEKVNSLI 1067

Query: 662  FMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASA 483
            FMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+AHGA+A
Sbjct: 1068 FMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIAHGAAA 1127

Query: 482  NLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNS-KLRGAYCRFCDSAENIVKVSLP 306
            NLHERLFTLSD SQMH+C KC N+ANVIQR   GG   K+RG +CR C+S E++V+V++P
Sbjct: 1128 NLHERLFTLSDSSQMHICRKCKNMANVIQRPGSGGGGRKIRGPFCRVCESVEDVVRVNVP 1187

Query: 305  YGAKLLCQELFSMGICVKFGTEHC 234
            YGAKLLCQELFSMGI +KF TE C
Sbjct: 1188 YGAKLLCQELFSMGISLKFDTELC 1211


>ref|XP_002324332.2| DNA-directed RNA polymerase family protein [Populus trichocarpa]
            gi|550317882|gb|EEF02897.2| DNA-directed RNA polymerase
            family protein [Populus trichocarpa]
          Length = 1181

 Score = 1565 bits (4052), Expect = 0.0
 Identities = 770/1165 (66%), Positives = 923/1165 (79%), Gaps = 2/1165 (0%)
 Frame = -1

Query: 3731 LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 3552
            L ++ L  FCK  +  FF+EYGLI+HQI SYN F+  G+Q++FDS   + VEPG+D SK+
Sbjct: 39   LGKETLQSFCKKAASLFFDEYGLISHQINSYNAFINSGLQRVFDSFGEVAVEPGYDSSKQ 98

Query: 3551 GEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSV 3372
             +GEW+ A+V FGKV LD+P FW G     + N      +FPRHARLQNMTYSARMK+ V
Sbjct: 99   KDGEWRRASVRFGKVTLDRPSFWGGTSSDAEHN------MFPRHARLQNMTYSARMKIHV 152

Query: 3371 KLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCD 3192
             ++VYTQ + ++DKFK+G +  VQK V+  + R+++IGRIPVMVKS++CWL  ++K DCD
Sbjct: 153  NVQVYTQTVGRSDKFKTGIDKVVQKNVVHTENREIIIGRIPVMVKSDLCWLTTVEKGDCD 212

Query: 3191 FDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPT 3012
            FD GGYF++KGAEK FIAQEQ+C+ RLW+  S  W V Y+S+    KR R+ + + +   
Sbjct: 213  FDHGGYFLIKGAEKVFIAQEQICMKRLWISNSQGWTVSYKSEV---KRNRLIVRLVELSK 269

Query: 3011 GEDQYFHGGKV-LTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 2835
             E  Y  G K  L ++F+S +IPLWI+FFALG+ SDKE++D I+   +DA  VNI  A+I
Sbjct: 270  LE--YIKGEKKGLCVYFLSTEIPLWILFFALGVRSDKEVIDLIDYASNDASIVNIFFASI 327

Query: 2834 NNAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYM 2655
            ++A++ C+ F +E  AL Y+D+ +K T+FPP E IE+ I  YLFP LN  + KA FLGYM
Sbjct: 328  HDADEKCEHFRREDRALDYVDKLLKKTRFPPKESIEDAISAYLFPRLNSRRHKARFLGYM 387

Query: 2654 VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRP 2475
            VK L   YTG RKC+NRD FRNK               H++HA R+M + +Q+DLYGDR 
Sbjct: 388  VKCLLEAYTGHRKCDNRDSFRNKRFELASELLERELKVHVSHALRRMTKALQRDLYGDRD 447

Query: 2474 MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQ 2295
            + PI++YLDASI+TNGL+RAFSTG W HPFK  E+++GVV NL R NPLQ   DLRKTRQ
Sbjct: 448  VHPIEHYLDASIVTNGLTRAFSTGAWCHPFKWMERVSGVVGNLGRANPLQTMIDLRKTRQ 507

Query: 2294 QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNC 2115
            QV Y GK GDAR+P+PSHWG++CFLSTPDGE CGLVKN+A+TG+VSTN+ E L DKLF+ 
Sbjct: 508  QVLYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLVKNLAVTGVVSTNISESLVDKLFDS 567

Query: 2114 GMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRK 1935
            GMEKLVDD ++    GK KVF+NG+WVGVC+DS  FV +L+  RR + +P QVEIK D +
Sbjct: 568  GMEKLVDDTYT-KLDGKHKVFLNGEWVGVCEDSCLFVGELRSMRRRRELPYQVEIKRDEQ 626

Query: 1934 HGEVRIFSDAGRILRPLLIVENIKKIKLAKGG-YTFQSLLXXXXXXXXXXXXXXDCQIAW 1758
              EVRIFSDAGRILRPLL+VEN+ KIK  KGG Y F SLL              DC  AW
Sbjct: 627  QREVRIFSDAGRILRPLLVVENLDKIKAFKGGNYIFTSLLDKGIIEFIGTEEEEDCCTAW 686

Query: 1757 GIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGF 1578
            GIK+L    + + P+ Y+HCELD+SFLLGLSCGIIPFANHDHARRVLYQ++KHSQQA+GF
Sbjct: 687  GIKFLLADIEGKQPMKYSHCELDMSFLLGLSCGIIPFANHDHARRVLYQAQKHSQQAIGF 746

Query: 1577 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 1398
            STTNPNIRVDTLS QL+YPQRPLFRTMISDCL LP           KPE FNGQNAIVAV
Sbjct: 747  STTNPNIRVDTLSHQLHYPQRPLFRTMISDCLVLP-----------KPELFNGQNAIVAV 795

Query: 1397 NVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQS 1218
            NVH GYNQEDSLVMNRASLERGMFR+EHIRSYKAEVDN EL + KR K +D + FGK QS
Sbjct: 796  NVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKELTD-KRRKSEDSITFGKIQS 854

Query: 1217 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 1038
            KIGRVDSLDDDGFP+IGAN+Q+GDIVIG+CAESG DHS+KLKHTE+G VQKVVL++NDEG
Sbjct: 855  KIGRVDSLDDDGFPFIGANMQSGDIVIGKCAESGADHSVKLKHTERGMVQKVVLSSNDEG 914

Query: 1037 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 858
            +NFAVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QG+VPDIVINPHAFP+R
Sbjct: 915  KNFAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGVVPDIVINPHAFPSR 974

Query: 857  QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 678
            QTPGQLLEAALGKGIACGGS RYATPF+T S+D+I +QLHRA FSRWG+ERVYNG++GEM
Sbjct: 975  QTPGQLLEAALGKGIACGGSKRYATPFSTLSVDDIIDQLHRAKFSRWGNERVYNGRTGEM 1034

Query: 677  MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 498
            +RSLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+A
Sbjct: 1035 VRSLIFMGPTFYQRLVHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1094

Query: 497  HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 318
            HGASANLHERLFTLSD S+MH+C KC N+ANVIQR V GG  K+RG YCR C+S +++VK
Sbjct: 1095 HGASANLHERLFTLSDSSEMHICQKCKNVANVIQRGVPGGR-KIRGPYCRVCESVDDLVK 1153

Query: 317  VSLPYGAKLLCQELFSMGICVKFGT 243
            VS+PYGAKLLCQELFSMGI +KF T
Sbjct: 1154 VSVPYGAKLLCQELFSMGISLKFDT 1178


>ref|XP_004145500.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cucumis
            sativus]
          Length = 1197

 Score = 1551 bits (4017), Expect = 0.0
 Identities = 767/1178 (65%), Positives = 923/1178 (78%), Gaps = 8/1178 (0%)
 Frame = -1

Query: 3743 EPIN---LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEP 3573
            EP+N   L E FL  FCK  S++FF +YGLI+HQI SYN F+++GIQK FD    I V+P
Sbjct: 36   EPVNIHDLGEAFLKDFCKKSSMAFFNQYGLISHQINSYNDFIKNGIQKAFDFFGDILVQP 95

Query: 3572 GFDPSKKGEGEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYS 3393
            G+DPSKKG+GEW+YA V FGKV LDKP FW G    K+ N      + PRHARLQNMTYS
Sbjct: 96   GYDPSKKGDGEWRYATVKFGKVTLDKPKFWGGAASGKEYN------MLPRHARLQNMTYS 149

Query: 3392 ARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVI--SEDERDVVIGRIPVMVKSNMCWL 3219
            +RMK+++ LE+YTQ L+ +DKFK+GK+  V K+ +  + D RDV IGR+PVMV S++CW+
Sbjct: 150  SRMKINISLEIYTQKLVSSDKFKTGKDQYVDKEPVEGASDNRDVFIGRLPVMVNSDLCWM 209

Query: 3218 NGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRV 3039
                K DC+FD+GGYF++KGAEK FIAQEQ+CL RLW+     W V YRS+    KR R+
Sbjct: 210  KDGQKRDCEFDRGGYFLIKGAEKIFIAQEQICLRRLWISNVQGWTVAYRSEV---KRNRL 266

Query: 3038 KIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDART 2859
             I + +    ED      KVL ++F+S ++P+WI+FFALG+SSDKEIVD I+    D   
Sbjct: 267  IIRLVENSKSEDLKSKE-KVLNVYFLSTEVPVWILFFALGVSSDKEIVDLIDYGRDDPTV 325

Query: 2858 VNILLATINNAEK--ACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGP 2685
            +NIL A++   +     + F +   AL ++D +I+ T FPP + IE+ ++ YLF  L G 
Sbjct: 326  LNILFASVREVDNDDKWKDFRRGKRALTFLDNEIRKTSFPPADKIEDCLNLYLFASLKGS 385

Query: 2684 KQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARD 2505
            KQK  FLGYMVK L   YTGRRKC+NRDDFRNK               HI HA+R+M + 
Sbjct: 386  KQKCHFLGYMVKCLLQAYTGRRKCDNRDDFRNKRFELAAELLERELKVHIAHARRRMEKA 445

Query: 2504 MQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQ 2325
            +Q+DLYGDR + PI++YLDASIITNGLSRAFSTG W H FK+ E+I+GVVA L R NPLQ
Sbjct: 446  LQRDLYGDRQVHPIEHYLDASIITNGLSRAFSTGAWAHAFKRMERISGVVATLGRANPLQ 505

Query: 2324 MTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLM 2145
              ++LR+TRQQV Y GK GDAR+P+PSHWG++CFLSTPDGE CGL+KN++ TGLVS N  
Sbjct: 506  TMAELRRTRQQVAYTGKVGDARYPHPSHWGRVCFLSTPDGENCGLIKNLSGTGLVSLNTK 565

Query: 2144 EPLKDKLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIP 1965
            + +   LF CGME LVD+  S S+ GK ++F++G+WVGVC+DSLSFVT+++  RR     
Sbjct: 566  KSITPTLFRCGMENLVDNT-STSFCGKYRIFLDGEWVGVCEDSLSFVTNVRRKRRRNPFL 624

Query: 1964 PQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAKG-GYTFQSLLXXXXXXXXXX 1788
             QVE+K D +  EVRIFSDAGRILRPLL+VEN+ +I  +KG  YTFQSLL          
Sbjct: 625  HQVEVKRDEQLKEVRIFSDAGRILRPLLVVENLNRIDKSKGENYTFQSLLDKGIIELIGT 684

Query: 1787 XXXXDCQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQS 1608
                DC++AW IK+L    +++    Y+HCELD+SFLLGLSCG++PFANHDHARR L+QS
Sbjct: 685  EEEEDCRVAWSIKHLM---EDEGTTKYSHCELDMSFLLGLSCGLVPFANHDHARRALFQS 741

Query: 1607 EKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEY 1428
            +KHS QA+GFS TN N RVDTLS QL+YPQRPLFRTM +DCLG P +     G+L KPE+
Sbjct: 742  QKHSNQAIGFSPTNSNFRVDTLSHQLHYPQRPLFRTMTADCLGTPGYLSSHAGILPKPEF 801

Query: 1427 FNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVK 1248
            +NGQNAIVAVNVH GYNQEDSLVMNRASLERGMFR+EHIRSYKAEVDN E  E KR K  
Sbjct: 802  YNGQNAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHIRSYKAEVDNKESSE-KRRKSD 860

Query: 1247 DRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQ 1068
            D ++FGK QSKIGRVDSLDDDGFPYIGANLQ+GDIVIGRCAESG DHSIKLKHTEKG VQ
Sbjct: 861  DAINFGKTQSKIGRVDSLDDDGFPYIGANLQSGDIVIGRCAESGADHSIKLKHTEKGMVQ 920

Query: 1067 KVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDI 888
            KVVL++ND+G+N+AVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDI
Sbjct: 921  KVVLSSNDDGKNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTIQGIVPDI 980

Query: 887  VINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSE 708
            VINPHAFP+RQTPGQLLEAALGKGIA GGS++YATPF+TPS+D IT+QLHRAGFSRWGSE
Sbjct: 981  VINPHAFPSRQTPGQLLEAALGKGIAAGGSLKYATPFSTPSVDAITDQLHRAGFSRWGSE 1040

Query: 707  RVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKF 528
            RVYNG++GEMMRSLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KF
Sbjct: 1041 RVYNGRTGEMMRSLIFMGPTFYQRLIHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKF 1100

Query: 527  GEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCR 348
            GEMERDCL+AHGASANLHERLFTLSD SQMHVC KC N+A+VIQRSV GG  K+RG YCR
Sbjct: 1101 GEMERDCLIAHGASANLHERLFTLSDSSQMHVCQKCKNVASVIQRSVAGGR-KMRGPYCR 1159

Query: 347  FCDSAENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
             C+S ++IV+V++PYGAKLLCQELFSMGI +KF T+ C
Sbjct: 1160 VCESFDDIVRVNVPYGAKLLCQELFSMGINLKFETQLC 1197


>gb|EXB86677.1| DNA-directed RNA polymerase D subunit 2a [Morus notabilis]
          Length = 1196

 Score = 1547 bits (4006), Expect = 0.0
 Identities = 772/1199 (64%), Positives = 935/1199 (77%), Gaps = 15/1199 (1%)
 Frame = -1

Query: 3785 SVSEKASTST---FTDQEPIN-------LSEKFLNKFCKDISVSFFEEYGLINHQIESYN 3636
            S  EK S S      D+E  N       L E FL  FCK+ S SFF EYGLI+HQI SYN
Sbjct: 15   SKGEKFSGSVDMDIDDEEEFNELTSIKELGEVFLQNFCKEASTSFFSEYGLISHQINSYN 74

Query: 3635 QFVEHGIQKLFDSIPMITVEPGFDPSKKGEGEWKYANVSFGKVMLDKPMFWTGEKFSKDD 3456
             F+ +G+QK+FDS   + VEPG+DPSKK + EW+YA V FGKV LD P FW G       
Sbjct: 75   DFIRNGVQKVFDSFGDLIVEPGYDPSKKRQNEWRYALVRFGKVTLDLPSFWGGA------ 128

Query: 3455 NKEKYLKLFPRHARLQNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDE 3276
            +K+K   L PRHARLQNMTYS+RMKV+V +EVYTQ L+++DKFK+GKE  + K++IS ++
Sbjct: 129  DKDKEYNLLPRHARLQNMTYSSRMKVNVHIEVYTQKLVRSDKFKTGKEQFLDKEIISTED 188

Query: 3275 RDVVIGRIPVMVKSNMCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQS 3096
            +DV+IGRIPVMVKS++CW+   +K DC FD GGYF++KGAEK FIAQEQ+C  RLW+   
Sbjct: 189  KDVMIGRIPVMVKSDLCWMKDAEKGDCYFDHGGYFIIKGAEKTFIAQEQICRKRLWITSH 248

Query: 3095 PTWLVQYRSDSEVNKR--RRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFAL 2922
                V Y+S+ + N+   R  +  ++D    +D       VL ++F+S +IP+WI+FFAL
Sbjct: 249  QNLTVAYQSEVKRNRLILRLAQSGLEDTTVEKD-------VLCVYFLSTEIPVWILFFAL 301

Query: 2921 GMSSDKEIVDTIEVDISDARTVNILLATINNAEKACQAFSKEGEALKYMDEQIKSTKFPP 2742
            G+SSDKE+VD I+    DA  +NIL  +I  +++ C  F ++ +AL ++++ IK T+FPP
Sbjct: 302  GVSSDKEVVDLIDFPTDDASILNILFPSIQISDEVCAGFRRQKKALGFVEKHIKKTQFPP 361

Query: 2741 VEGIEEVIDKYLFPHLNGPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXX 2562
             E  EE +D +LFP+L G  QKA FLGYMVK L   +TGRRKC N+DDFRNK        
Sbjct: 362  RESAEECLDMFLFPNLRGMLQKARFLGYMVKCLLQAFTGRRKCNNKDDFRNKRLDLAGEL 421

Query: 2561 XXXXXXAHINHAKRKMARDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFK 2382
                  A ++HA+++ A+ +Q+DLYGD+ ++ I++YLDASI+TNGLSRAFSTG W HPFK
Sbjct: 422  LERELRAQVSHARKRTAKALQRDLYGDKGLRQIEFYLDASIVTNGLSRAFSTGAWCHPFK 481

Query: 2381 KSEKIAGVVANLRRLNPLQMTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGE 2202
            K+E+I+GVVAN+ R NPLQ   D+RKTRQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE
Sbjct: 482  KTERISGVVANVGRTNPLQTVVDMRKTRQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGE 541

Query: 2201 KCGLVKNMAITGLVSTNLMEPLKDKLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCD 2022
             CGLVKN+A TGLVS N+ E L   L + GME L +D ++   + K KVF+NGDW+GVC 
Sbjct: 542  NCGLVKNLAATGLVSINIAESLISTLCDSGMENLANDTYTPLHE-KHKVFLNGDWIGVCA 600

Query: 2021 DSLSFVTDLKHSRRSKGIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAK- 1845
            DSL+FVT+L+  RR   +P QVEIK D +HGEVRIFSD+GRILRPLL+VEN+ +IK +K 
Sbjct: 601  DSLAFVTELRRKRRRNELPHQVEIKRDEQHGEVRIFSDSGRILRPLLVVENLNRIKPSKE 660

Query: 1844 GGYTFQSLLXXXXXXXXXXXXXXDCQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLS 1665
            G YTF SLL              DC+ AWGIKYLF+ E    P+NYTHCELD+SFLL +S
Sbjct: 661  GKYTFHSLLDKGIIELIGAEEEEDCRTAWGIKYLFM-EDGGKPVNYTHCELDMSFLLSVS 719

Query: 1664 CGIIPFANHDHARRVLYQSEKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDC 1485
            CGIIPFANHDHARRVLYQ++KHSQQA+GF TTNP+IRVDTLS QL+YPQRPLF+TM SDC
Sbjct: 720  CGIIPFANHDHARRVLYQAQKHSQQAIGFPTTNPDIRVDTLSHQLHYPQRPLFQTMTSDC 779

Query: 1484 LGLPAFPQGQNGVLAKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRS 1305
            LG   +   QNG + K E FNGQNAIVAVNVH GYNQEDS+VMNRASLERGMFR+EHIRS
Sbjct: 780  LGKRGYAPSQNGFIPKFECFNGQNAIVAVNVHLGYNQEDSIVMNRASLERGMFRSEHIRS 839

Query: 1304 YKAEVDNMELFETKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCA 1125
            YKA+VDN E  + KR K  D  +F K  SK GRVDSLDDDGFP+IGANLQ+GDIVIGRCA
Sbjct: 840  YKADVDNKESTD-KRRKPDDCFNFAKIPSKNGRVDSLDDDGFPFIGANLQSGDIVIGRCA 898

Query: 1124 ESGTDHSIKLKHTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVG 945
            ESG DHSIKLKHTEKG VQKVVL++ND+G+NFAVVSLRQ+R PILGDKFSSMHGQKGV+G
Sbjct: 899  ESGADHSIKLKHTEKGMVQKVVLSSNDDGKNFAVVSLRQVRQPILGDKFSSMHGQKGVLG 958

Query: 944  LLESQENFPFTHQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIAC--GGSVRYATPFTT 771
             LESQENFPFT QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIA   G  +R+ATPF+T
Sbjct: 959  YLESQENFPFTIQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIALAKGIPLRHATPFST 1018

Query: 770  PSIDEITNQLHRAGFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTG 591
            PS+D IT QLH+AGFSRWG+ERVYNG++GEM+RSLIFMGPTFYQRL HM+EDKVK+RNTG
Sbjct: 1019 PSVDAITEQLHKAGFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLVHMSEDKVKFRNTG 1078

Query: 590  PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNI 411
            PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSD SQMH+C++C N+
Sbjct: 1079 PVHPLTRQPVADRKRFGGVKFGEMERDCLLAHGASANLHERLFTLSDSSQMHICHRCHNV 1138

Query: 410  ANVIQRSVQGGNSKLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            AN+IQRS+ GG  K+RG YCR C SA++IV+V++PYGAKLLCQELF+MGI +KF T  C
Sbjct: 1139 ANIIQRSLMGGR-KVRGPYCRICKSADDIVRVNVPYGAKLLCQELFTMGINLKFETRIC 1196


>ref|XP_004501385.1| PREDICTED: DNA-directed RNA polymerase D subunit 2a-like [Cicer
            arietinum]
          Length = 1199

 Score = 1542 bits (3992), Expect = 0.0
 Identities = 754/1168 (64%), Positives = 934/1168 (79%), Gaps = 2/1168 (0%)
 Frame = -1

Query: 3731 LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKK 3552
            L +  +  FCK  S+ FF+EYGLI+HQI SYNQF   G+Q  FDS   +TV PGFDPSKK
Sbjct: 47   LGDDMVRYFCKKASIMFFDEYGLISHQINSYNQFATSGLQNTFDSFGDLTVTPGFDPSKK 106

Query: 3551 GEGE-WKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVS 3375
            G+ E ++YA+V FGKV LD+PMFW GE  +++      +K+ PRHARLQ MTY+++MKV+
Sbjct: 107  GDNEHYRYASVKFGKVTLDRPMFWCGEGNTQE------MKMLPRHARLQRMTYASKMKVN 160

Query: 3374 VKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDC 3195
            V+++VY    +++DKFK+GKE  + +++I ++ R++ IGR+PVMVKS++CW+NG++K DC
Sbjct: 161  VQVQVYIPKKVRSDKFKTGKEEYIDREIIMDENREITIGRLPVMVKSDLCWMNGVEKGDC 220

Query: 3194 DFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAP 3015
            +FD GGYF++KGAEK FIAQEQ+ L RLWV   P W V Y+S     KR R+ +++ +  
Sbjct: 221  EFDHGGYFLIKGAEKIFIAQEQIFLKRLWVTNVPYWAVAYKSQM---KRNRMVVKLVENT 277

Query: 3014 TGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATI 2835
            T E    +G KVLT++F+S +IP+W++FFALG++SDK+IVD I+    D R  NIL A+I
Sbjct: 278  TVEG-IKNGEKVLTVYFLSVEIPVWLLFFALGVTSDKQIVDLIDYGEGDGRIQNILFASI 336

Query: 2834 NNAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYM 2655
              A++ C+ F +   AL Y++E++K  +FPP E I+E ++ Y+FP++ G  +KA +L YM
Sbjct: 337  READEKCEQFRRGKNALLYIEERVKGVQFPPPESIDECLNMYVFPNIKGLNRKARYLAYM 396

Query: 2654 VKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRP 2475
            VK L L YTGRRK +NRDDFRNK               HI HA+++MA+ +Q+DLYGDR 
Sbjct: 397  VKVLLLAYTGRRKTDNRDDFRNKRLELAGELLERELKVHIAHARKRMAKALQRDLYGDRD 456

Query: 2474 MKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQ 2295
            +  I++YLDASIITNGL RAFSTG WTHP+K+ E+I+GVVA L R NPLQ  ++LR+TRQ
Sbjct: 457  VHQIEHYLDASIITNGLQRAFSTGAWTHPYKRMERISGVVATLGRTNPLQTMAELRRTRQ 516

Query: 2294 QVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLMEPLKDKLFNC 2115
            QV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKNMA+TGLVSTN+ E +  +LF C
Sbjct: 517  QVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTNVTESILPQLFAC 576

Query: 2114 GMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDRK 1935
            GME+LVDD  +A    KDKVF+NGDWVGVC DS SFV +L++ RR   +P QVEIK D  
Sbjct: 577  GMEELVDDT-TAVLGNKDKVFLNGDWVGVCSDSASFVAELRNRRRKNELPHQVEIKRDPS 635

Query: 1934 HGEVRIFSDAGRILRPLLIVENIKKIKLAKGG-YTFQSLLXXXXXXXXXXXXXXDCQIAW 1758
              EVRI SDAGRILRPLL+V N+ KIK +K    +FQSLL              DC+ AW
Sbjct: 636  QEEVRILSDAGRILRPLLVVSNLLKIKGSKSDPKSFQSLLDNGLIELIGPEEEEDCKTAW 695

Query: 1757 GIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALGF 1578
            G+ YLF G++ ++ + YTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QA+GF
Sbjct: 696  GVPYLF-GKEGKSSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIGF 754

Query: 1577 STTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVAV 1398
            STTNP+IRVD LS QL+YPQ+PLF+TM SDCLG P +  G + +L K E++NGQNAIVAV
Sbjct: 755  STTNPDIRVDALSHQLFYPQKPLFQTMTSDCLGKPGY-LGPSKLLPKSEFYNGQNAIVAV 813

Query: 1397 NVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQS 1218
            NVH GYNQEDSLVMNRASL+RGMFR+EHIRSYKAE +N E  E KR K +D V+FGK QS
Sbjct: 814  NVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKAENENKESTEKKR-KPEDIVNFGKIQS 872

Query: 1217 KIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDEG 1038
            KIGRVDSLDDDGFP++GANLQ GDI+IGRCA+SG DHSIKLKHTE+G VQKVVL++NDEG
Sbjct: 873  KIGRVDSLDDDGFPFVGANLQIGDIIIGRCADSGADHSIKLKHTERGYVQKVVLSSNDEG 932

Query: 1037 QNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPTR 858
            +NFAVVSLRQ+RSP+LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVINPHAFP+R
Sbjct: 933  KNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTKQGIVPDIVINPHAFPSR 992

Query: 857  QTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGEM 678
            QTPGQLLEAALGKGIAC GS+R ATPF+T S++ IT+QLHRAGFSRWG+ERVYNG++GEM
Sbjct: 993  QTPGQLLEAALGKGIACVGSLRNATPFSTSSVEAITDQLHRAGFSRWGNERVYNGRTGEM 1052

Query: 677  MRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLLA 498
            +RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+A
Sbjct: 1053 VRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLIA 1112

Query: 497  HGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIVK 318
            HGASANL+ERLFTLSD SQ+H+C+KC N+ANVI R V GG  K+RG YCRFC+SA++IV 
Sbjct: 1113 HGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGR-KIRGPYCRFCESADDIVV 1171

Query: 317  VSLPYGAKLLCQELFSMGICVKFGTEHC 234
              +PYGAKLLCQELFSMGI +KF TE C
Sbjct: 1172 AHVPYGAKLLCQELFSMGINLKFETELC 1199


>ref|XP_007136942.1| hypothetical protein PHAVU_009G087100g [Phaseolus vulgaris]
            gi|561010029|gb|ESW08936.1| hypothetical protein
            PHAVU_009G087100g [Phaseolus vulgaris]
          Length = 1202

 Score = 1531 bits (3963), Expect = 0.0
 Identities = 744/1169 (63%), Positives = 930/1169 (79%), Gaps = 5/1169 (0%)
 Frame = -1

Query: 3725 EKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSKKGE 3546
            E+     CK  S+ FFEEYGLI+HQI SYN +   G+Q+ FD    + V PGFDPSKKG 
Sbjct: 49   EEAFRYHCKKFSMLFFEEYGLISHQINSYNHYANVGLQRTFDGFGELVVTPGFDPSKKGA 108

Query: 3545 GE-WKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKVSVK 3369
             E ++YA+V FGKV LDKPMFW GE  +++       K+ PRHARLQ MTY++++K+ VK
Sbjct: 109  NEHYRYASVKFGKVTLDKPMFWGGEGNAQE------FKMLPRHARLQRMTYASKIKILVK 162

Query: 3368 LEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKNDCDF 3189
            ++VY    +++DKFK+GKE  + K+++ EDER+++IGR+PVMVKS++CW+NG +K+DC+F
Sbjct: 163  VQVYVPKKVRSDKFKTGKEEYLDKEILKEDEREMIIGRLPVMVKSDLCWMNG-EKDDCEF 221

Query: 3188 DQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIEIDDAPTG 3009
            D GGYF++KGAEK FIAQEQL L RLWV  SP W++ Y+S     KR R+ I++      
Sbjct: 222  DHGGYFLIKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQM---KRNRMVIKLVGNSRN 278

Query: 3008 EDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVNILLATINN 2829
            E+   +G   LT++F+S ++P+W++FFALG++SDK++VD I  D  DAR  NILLA++ +
Sbjct: 279  EEGQ-NGDMFLTVYFLSVEVPVWVLFFALGVTSDKDVVDLIGCDNDDARIQNILLASVCD 337

Query: 2828 AEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKAVFLGYMVK 2649
            A++ C AF +   A++Y+++ IKS +FPP E IEE ++ Y+FP ++G  +KA FL YMVK
Sbjct: 338  ADEKCGAFRRGRNAVQYLEKYIKSVQFPPPESIEECLEMYVFPGISGLNRKARFLAYMVK 397

Query: 2648 YLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKDLYGDRPMK 2469
             L L YTGRRKC+NRDDFRNK               HI HA+++M++ +Q+DLYG+R ++
Sbjct: 398  GLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMSKALQRDLYGERDVR 457

Query: 2468 PIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSDLRKTRQQV 2289
            PI++YLDASIITNGL RAFSTG W+HP+K+ E+I+GVVAN+ R NPLQ  ++LR+ RQQV
Sbjct: 458  PIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNPLQTMAELRRARQQV 517

Query: 2288 GYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVST---NLMEPLKDKLFN 2118
             Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKNMA+TGLVST   N  E +   L N
Sbjct: 518  QYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNMAVTGLVSTDVSNASESILPTLLN 577

Query: 2117 CGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQVEIKWDR 1938
            CGME+LV+D  +     KDKVF+NGDWVGVC DS  FV +L+  RR   +P QVEIK D+
Sbjct: 578  CGMEELVNDT-TTHMGNKDKVFLNGDWVGVCPDSSWFVAELRSERRKNKLPHQVEIKRDQ 636

Query: 1937 KHGEVRIFSDAGRILRPLLIVENIKKIKLAKGG-YTFQSLLXXXXXXXXXXXXXXDCQIA 1761
               EVRI+SDAGRILRPLL+V N+ +IK  K   Y+F++LL              DC  A
Sbjct: 637  SQHEVRIYSDAGRILRPLLVVGNLLRIKRFKSDRYSFRTLLEEGVIELIGPEEEEDCCTA 696

Query: 1760 WGIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKHSQQALG 1581
            WG++YLF G++ +  + YTHCELD+SFLLGLSC ++PFANHDHARRVLYQS+KHS QA+G
Sbjct: 697  WGVQYLF-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARRVLYQSQKHSSQAIG 755

Query: 1580 FSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNGQNAIVA 1401
            FST NPN R+DTLS QL+YPQRPLF+TM SDCLG P  P GQ+ +  K E++NGQNAIVA
Sbjct: 756  FSTLNPNTRIDTLSHQLHYPQRPLFQTMASDCLGKPTSPLGQSKIHPKAEFYNGQNAIVA 815

Query: 1400 VNVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRVDFGKAQ 1221
            VNVH GYNQEDSLVMNRASL+RGMFR+EHIRSYK+E+DN +  E KR K +D V+FGK Q
Sbjct: 816  VNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKQSSEKKR-KSEDIVNFGKLQ 874

Query: 1220 SKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVVLTANDE 1041
            SKIGRVDSLDDDGFPY+GANLQ+GDI+IGRCAESG D+S+KLKHTE+G VQKVVL++NDE
Sbjct: 875  SKIGRVDSLDDDGFPYVGANLQSGDIIIGRCAESGADNSVKLKHTERGYVQKVVLSSNDE 934

Query: 1040 GQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVINPHAFPT 861
            G+NFA VSLRQ+RSP+LGDKFSSMHGQKGV+G LE QENFPFT QGIVPDIVINPHAFP+
Sbjct: 935  GKNFAAVSLRQVRSPVLGDKFSSMHGQKGVLGFLECQENFPFTRQGIVPDIVINPHAFPS 994

Query: 860  RQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVYNGQSGE 681
            RQTPGQLLEAALGKGIACGG +R+ATPF+TPS+D IT+QLHRAGFSRWG+ERVYNG++GE
Sbjct: 995  RQTPGQLLEAALGKGIACGGKLRHATPFSTPSVDAITDQLHRAGFSRWGNERVYNGRTGE 1054

Query: 680  MMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEMERDCLL 501
            M+RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEMERDCL+
Sbjct: 1055 MVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEMERDCLI 1114

Query: 500  AHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCDSAENIV 321
            AHGASANL+ERLFTLSD SQ+H+C+ C N++NVI R V GG  K+RG YCR C+SA++IV
Sbjct: 1115 AHGASANLYERLFTLSDSSQIHICSGCKNVSNVIMRPVSGGR-KVRGPYCRHCESADDIV 1173

Query: 320  KVSLPYGAKLLCQELFSMGICVKFGTEHC 234
               +PYGAKLLCQELFSMGI +KF T+ C
Sbjct: 1174 VAHVPYGAKLLCQELFSMGINLKFETQLC 1202


>gb|EPS73521.1| hypothetical protein M569_01229, partial [Genlisea aurea]
          Length = 1205

 Score = 1523 bits (3944), Expect = 0.0
 Identities = 739/1175 (62%), Positives = 912/1175 (77%), Gaps = 8/1175 (0%)
 Frame = -1

Query: 3734 NLSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPMITVEPGFDPSK 3555
            +L E  +  FC+  + SFFE++GLI+HQ+ SYN F+ HGI +LF SI  I VEPG+DPSK
Sbjct: 43   DLDEGVVKSFCRKAATSFFEQHGLISHQLNSYNNFINHGIHQLFASIGEIIVEPGYDPSK 102

Query: 3554 KGE-GEWKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARLQNMTYSARMKV 3378
            +G+ GEW+ A++ FGKV L++P FWTGEKFS  +  +  L+L P+HARLQNMTY+AR+KV
Sbjct: 103  RGDDGEWQKASLKFGKVNLERPSFWTGEKFSSAEGAKDNLELHPKHARLQNMTYAARIKV 162

Query: 3377 SVKLEV-YTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSNMCWLNGLDKN 3201
               LEV YT+ L++++KF +G    VQ+  +     ++  G++PVMV S++CWL    K 
Sbjct: 163  ETHLEVVYTEGLVRSEKFTTGVSTHVQRTTLKSLSLEINFGKLPVMVNSDLCWLKSTGKK 222

Query: 3200 DCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNKRRRVKIE--- 3030
            DC+FDQGGYF++KGAEK FIAQEQ+CL RLWV + PTW + YR    + KRRR+ ++   
Sbjct: 223  DCEFDQGGYFIIKGAEKTFIAQEQICLKRLWVSKDPTWTISYRP---ITKRRRIYLKLVP 279

Query: 3029 -IDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDISDARTVN 2853
             ++ AP GE       K+LT++F   ++P+WI+FFALG  +DKE+V  I++DI D+   N
Sbjct: 280  KVESAPVGE-------KILTVYFSFVEMPIWILFFALGARNDKEVVKMIDMDIEDSAIAN 332

Query: 2852 ILLATINNAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLNGPKQKA 2673
            ILLA+I++A+   + F K G A+K++ + ++  K+PP E +EE    +LFPHL    QKA
Sbjct: 333  ILLASIHDADSKYEGFRKNGSAIKHLKDLMQEGKYPPTESVEEYFQIHLFPHLKSSVQKA 392

Query: 2672 VFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMARDMQKD 2493
             FL YMVK L  CY GRRK +NRDD RNK                I HA+R+M R MQ+D
Sbjct: 393  CFLAYMVKCLLECYKGRRKVDNRDDLRNKRLELAGELLERELRIQIKHAERRMMRSMQRD 452

Query: 2492 LYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNPLQMTSD 2313
            L   R ++ ID+YLDASIITNGLSRAFSTG W+HP+K+ E+I+G+VA LRR NPLQ  +D
Sbjct: 453  LDKGRDLQTIDHYLDASIITNGLSRAFSTGAWSHPYKRMERISGIVATLRRTNPLQAIAD 512

Query: 2312 LRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTNLM--EP 2139
            +RKTRQQV Y G+ GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A  GLVST ++  E 
Sbjct: 513  MRKTRQQVSYTGRVGDARYPHPSHWGKICFLSTPDGENCGLVKNLASLGLVSTEVLDQEG 572

Query: 2138 LKDKLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRRSKGIPPQ 1959
            L  K   CGME+L DD  S+   GK K+F++GD VGVC DS SFV+ L+  R+   +P Q
Sbjct: 573  LLKKFRECGMEQLADDT-SSLLDGKHKIFLDGDLVGVCRDSSSFVSMLRRRRQKNEVPHQ 631

Query: 1958 VEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAKGGYTFQSLLXXXXXXXXXXXXX 1779
            VEIK D+ +GEVR+F+DAGRILRPLL+V N++KI   K    FQSLL             
Sbjct: 632  VEIKMDQSNGEVRVFADAGRILRPLLVVRNLRKINDLKSHVFFQSLLDVGIVELIGPEEE 691

Query: 1778 XDCQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARRVLYQSEKH 1599
             DCQ AWG KYLF+ E E  P+ Y+HCELD SFLLGLSCGIIPFANHDHARRVLYQSEKH
Sbjct: 692  EDCQTAWGTKYLFMAELENPPVKYSHCELDSSFLLGLSCGIIPFANHDHARRVLYQSEKH 751

Query: 1598 SQQALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVLAKPEYFNG 1419
            SQQA+GFSTT+PNIRVDT S QLYYPQ+PLFRT++SDCLG       + G++  P +FNG
Sbjct: 752  SQQAIGFSTTSPNIRVDTNSHQLYYPQKPLFRTVLSDCLGKLTDSCRRKGIIPLPPFFNG 811

Query: 1418 QNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETKRLKVKDRV 1239
            Q AIVAVNVH GYNQEDSLVMNRASLERGMFR+EH+RSYK++VDN E    K+ K  D +
Sbjct: 812  QCAIVAVNVHLGYNQEDSLVMNRASLERGMFRSEHVRSYKSDVDNSEAAPVKKFKADDLI 871

Query: 1238 DFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTEKGKVQKVV 1059
             FGK QSKIGRVDSLD+DGFPY+GANLQTGDIVIG+C  +G DHSIKLKHTE+G VQKV+
Sbjct: 872  SFGKVQSKIGRVDSLDEDGFPYVGANLQTGDIVIGKCTATGVDHSIKLKHTERGMVQKVI 931

Query: 1058 LTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQGIVPDIVIN 879
            L+A+DEG+N+AVVSLRQ+RSP LGDKFSSMHGQKGV+G LESQENFPFT QGIVPDIVIN
Sbjct: 932  LSADDEGRNYAVVSLRQVRSPCLGDKFSSMHGQKGVLGFLESQENFPFTRQGIVPDIVIN 991

Query: 878  PHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFSRWGSERVY 699
            PHAFP+RQTPGQLLEAALGKGIA GG ++YATPF++PS+++IT QLHR GFSRWG+E+VY
Sbjct: 992  PHAFPSRQTPGQLLEAALGKGIALGGGLKYATPFSSPSVEDITAQLHRLGFSRWGAEKVY 1051

Query: 698  NGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRFGGVKFGEM 519
            +G++GE ++SLIFMGPTFYQRL HMAEDKVK+RNTGPVHPLTRQPVADRKRFGG+KFGEM
Sbjct: 1052 DGRTGEALKSLIFMGPTFYQRLTHMAEDKVKFRNTGPVHPLTRQPVADRKRFGGIKFGEM 1111

Query: 518  ERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLRGAYCRFCD 339
            ERDCL+AHGA+ANLHERLFTLSD SQMH+C KC N+ANVIQR V GG  K+RG YCRFC+
Sbjct: 1112 ERDCLIAHGAAANLHERLFTLSDSSQMHICRKCKNMANVIQRPVFGGR-KVRGPYCRFCE 1170

Query: 338  SAENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            S E++V+V++PYGAKLLCQELFSMGI +KF TE C
Sbjct: 1171 SVEDVVRVNVPYGAKLLCQELFSMGISLKFDTEIC 1205


>ref|XP_003523670.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score = 1522 bits (3941), Expect = 0.0
 Identities = 744/1183 (62%), Positives = 933/1183 (78%), Gaps = 11/1183 (0%)
 Frame = -1

Query: 3749 DQEPIN------LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPM 3588
            D +P N      L E  +  +CK  S+ FF+EYGLI+HQI S+N FV  G+Q  FDS   
Sbjct: 37   DLDPTNSEILEELGEDMVKYWCKKASMLFFDEYGLISHQINSFNHFVAIGLQNTFDSFGD 96

Query: 3587 ITVEPGFDPSKKGEGE-WKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARL 3411
            + V PGFDPSKKGE E ++YA+V FGKV LDKPMFW GE  +++       K+ PRHAR+
Sbjct: 97   LVVTPGFDPSKKGENEHFRYASVKFGKVKLDKPMFWGGEGNAQE------FKMLPRHARI 150

Query: 3410 QNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSN 3231
            Q MTY++++K+ VK++VY    +++DKFK+GKE  + ++++ EDER+++IGR+PVMVKS+
Sbjct: 151  QRMTYASKVKIQVKVQVYVPKKVRSDKFKTGKEEFLDREIMKEDEREIIIGRLPVMVKSD 210

Query: 3230 MCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNK 3051
            +CW+   +K+D +FD GGYF+VKGAEK FIAQEQL L RLWV  SP W++ Y+S     K
Sbjct: 211  LCWMKDAEKDDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQM---K 267

Query: 3050 RRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDIS 2871
            R R+ I++      E+   +G   LT++F+S ++P+W++FFALG+SSDKEIVD I     
Sbjct: 268  RNRMVIKLVGNSRSEEVE-NGDMCLTVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGND 326

Query: 2870 DARTVNILLATINNAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLN 2691
            D R  NIL A++ +A++ C AF +   A++Y+++ +KS +FPP E ++E ++ Y+FP ++
Sbjct: 327  DVRIQNILFASVRDADEKCGAFRRVRNAVQYLEKCVKSVQFPPSESMQECLEMYVFPGIS 386

Query: 2690 GPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMA 2511
            G  +KA FL YMVK L L YTGRRKC+NRDDFRNK               H+ HA+++MA
Sbjct: 387  GLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHVAHARKRMA 446

Query: 2510 RDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNP 2331
            + +Q+DLYGDR ++PI++YLDASIITNGL RAFSTG W+HP+K+ E+I+GVVAN+ R NP
Sbjct: 447  KALQRDLYGDRDVRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNP 506

Query: 2330 LQMTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTN 2151
            LQ  ++LR+ RQQV Y GK GDAR+P+PSHWGK+CFL+TPDGE CGLVKN+++TGLVST+
Sbjct: 507  LQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFLTTPDGENCGLVKNLSVTGLVSTD 566

Query: 2150 LMEPLKD---KLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRR 1980
            + +  +    KL +CGM++LVDD  S      DKV +NGDWVGVC DS SFV +L+  RR
Sbjct: 567  VTDVTESILLKLVDCGMQELVDDT-STHLGSMDKVLLNGDWVGVCPDSSSFVAELRSRRR 625

Query: 1979 SKGIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAKGG-YTFQSLLXXXXX 1803
               +P QVEIK D+   EVRI+SDAGRILRPLL+V N+ KIK  K   Y+FQSLL     
Sbjct: 626  RNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDRYSFQSLLDKGVI 685

Query: 1802 XXXXXXXXXDCQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARR 1623
                     DC  AWG++YLF G++ +  + YTHCELD+SFLLGLSC ++PFANHDHARR
Sbjct: 686  ELIGPEEEEDCCTAWGVEYLF-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARR 744

Query: 1622 VLYQSEKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVL 1443
            VLYQS+KHS QA+GFSTTNPNIRVDTLS QL+YPQ+PLFRTM SDCLG P    GQ+ + 
Sbjct: 745  VLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMTSDCLGKPDHSLGQSKIP 804

Query: 1442 AKPEYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELFETK 1263
             K E++NGQNAIVAVNVH GYNQEDSLVMNRASL+RGMFR+EHIRSYK+E+DN E  + K
Sbjct: 805  PKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESSDKK 864

Query: 1262 RLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLKHTE 1083
            R K +D V+F K QSKIGRVDSLDDDGFPY+GANLQ+GDI+IG+CAESG D+S+KLKHTE
Sbjct: 865  R-KPEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKCAESGADNSVKLKHTE 923

Query: 1082 KGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFTHQG 903
            +G VQKVVL++NDEG+NFAVVSLRQ+RSP+LGDKFSSMHGQKGV+G LESQENFPFT QG
Sbjct: 924  RGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFTRQG 983

Query: 902  IVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRAGFS 723
            IVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG ++ ATPF+TPS+D IT QLHRAGFS
Sbjct: 984  IVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGILKQATPFSTPSVDAITEQLHRAGFS 1043

Query: 722  RWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADRKRF 543
            RWG+ERVYNG++GEM+RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADRKRF
Sbjct: 1044 RWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADRKRF 1103

Query: 542  GGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNSKLR 363
            GG+KFGEMERDCL+AHGASANL+ERLFTLSD SQ+H+C+KC  +ANVI R V GG  K+R
Sbjct: 1104 GGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKKVANVILRPVSGGR-KIR 1162

Query: 362  GAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            G YCR C+SA++IV   +PYGAKLLCQELFSMGI +KF T+ C
Sbjct: 1163 GPYCRHCESADDIVVAHVPYGAKLLCQELFSMGINLKFETQLC 1205


>ref|XP_003527775.1| PREDICTED: DNA-directed RNA polymerases IV and V subunit 2-like
            [Glycine max]
          Length = 1205

 Score = 1516 bits (3925), Expect = 0.0
 Identities = 749/1186 (63%), Positives = 930/1186 (78%), Gaps = 14/1186 (1%)
 Frame = -1

Query: 3749 DQEPIN------LSEKFLNKFCKDISVSFFEEYGLINHQIESYNQFVEHGIQKLFDSIPM 3588
            D +P N      L E  +  +CK  S+ FF EYGLI+HQI S+N F+  G+QK F+S   
Sbjct: 34   DLDPTNAEILEELGEDIVKYWCKKASMLFFNEYGLISHQINSFNHFIHTGLQKTFESFGD 93

Query: 3587 ITVEPGFDPSKKGEGE-WKYANVSFGKVMLDKPMFWTGEKFSKDDNKEKYLKLFPRHARL 3411
            + V PGFDPSKKGE E ++YA+V FG V LDKPMFW GE  +++       K+ PRHAR+
Sbjct: 94   LVVTPGFDPSKKGENEHFRYASVKFGNVKLDKPMFWGGEGNAQE------FKMLPRHARI 147

Query: 3410 QNMTYSARMKVSVKLEVYTQNLMKTDKFKSGKEHSVQKQVISEDERDVVIGRIPVMVKSN 3231
            Q MTY++++K+ VK++VY    +++DKFK+GK   + ++V+ EDER+++IGR+PVMVKS+
Sbjct: 148  QRMTYASKVKIQVKVQVYVPKKVRSDKFKTGKAEFLDREVMKEDEREIIIGRLPVMVKSD 207

Query: 3230 MCWLNGLDKNDCDFDQGGYFVVKGAEKAFIAQEQLCLNRLWVYQSPTWLVQYRSDSEVNK 3051
            +CW+   +K D +FD GGYF+VKGAEK FIAQEQL L RLWV  SP W++ Y+S     K
Sbjct: 208  LCWMKEAEKEDDEFDHGGYFIVKGAEKTFIAQEQLYLKRLWVMNSPGWMIAYKSQM---K 264

Query: 3050 RRRVKIEIDDAPTGEDQYFHGGKVLTMHFMSCKIPLWIVFFALGMSSDKEIVDTIEVDIS 2871
            R R+ I++     GE+   +G   L ++F+S ++P+W++FFALG+SSDKEIVD I     
Sbjct: 265  RNRMVIKLVGNSRGEEVE-NGDMSLAVYFLSVEVPVWVLFFALGVSSDKEIVDLIGCGND 323

Query: 2870 DARTVNILLATINNAEKACQAFSKEGEALKYMDEQIKSTKFPPVEGIEEVIDKYLFPHLN 2691
            D R  NIL A++ +A++ C AF +   A++Y+++ +KS +FPP E ++E ++ Y+FP ++
Sbjct: 324  DVRIQNILFASVRDADEKCGAFRRGRHAVQYLEKCVKSVQFPPSESMQECLEMYVFPGIS 383

Query: 2690 GPKQKAVFLGYMVKYLFLCYTGRRKCENRDDFRNKXXXXXXXXXXXXXXAHINHAKRKMA 2511
            G  +KA FL YMVK L L YTGRRKC+NRDDFRNK               HI HA+++MA
Sbjct: 384  GLNRKARFLAYMVKGLLLAYTGRRKCDNRDDFRNKRLELASELLDRELKVHIAHARKRMA 443

Query: 2510 RDMQKDLYGDRPMKPIDYYLDASIITNGLSRAFSTGHWTHPFKKSEKIAGVVANLRRLNP 2331
            + +Q+DLYGDR ++PI++YLDASIITNGL RAFSTG W+HP+K+ E+I+GVVAN+ R NP
Sbjct: 444  KALQRDLYGDRDVRPIEHYLDASIITNGLQRAFSTGAWSHPYKRMERISGVVANVGRTNP 503

Query: 2330 LQMTSDLRKTRQQVGYVGKGGDARFPNPSHWGKLCFLSTPDGEKCGLVKNMAITGLVSTN 2151
            LQ  ++LR+ RQQV Y GK GDAR+P+PSHWGK+CFLSTPDGE CGLVKN+A+TGLVST+
Sbjct: 504  LQTMAELRRARQQVQYTGKVGDARYPHPSHWGKVCFLSTPDGENCGLVKNLAVTGLVSTD 563

Query: 2150 LM---EPLKDKLFNCGMEKLVDDAFSASWKGKDKVFVNGDWVGVCDDSLSFVTDLKHSRR 1980
            +    E +  KL +CGME+LVDD  S     KDKV +NGDWVGVC DS SFV +L+  RR
Sbjct: 564  VSAVSEYILPKLLDCGMEELVDDT-STHLGNKDKVLLNGDWVGVCPDSSSFVAELRSRRR 622

Query: 1979 SKGIPPQVEIKWDRKHGEVRIFSDAGRILRPLLIVENIKKIKLAKGGY-TFQSLLXXXXX 1803
               +P QVEIK D+   EVRI+SDAGRILRPLL+V N+ KIK  K    +FQSLL     
Sbjct: 623  RNELPHQVEIKRDQSQHEVRIYSDAGRILRPLLVVGNLLKIKGFKSDCNSFQSLLDKGVI 682

Query: 1802 XXXXXXXXXDCQIAWGIKYLFLGEKEQTPINYTHCELDLSFLLGLSCGIIPFANHDHARR 1623
                     DC  AWG++YLF G++ +  + YTHCELD+SFLLGLSC ++PFANHDHARR
Sbjct: 683  ELIGPEEEEDCCTAWGVEYLF-GKEGKRSVKYTHCELDMSFLLGLSCSLVPFANHDHARR 741

Query: 1622 VLYQSEKHSQQALGFSTTNPNIRVDTLSQQLYYPQRPLFRTMISDCLGLPAFPQGQNGVL 1443
            VLYQS+KHS QA+GFSTTNPNIRVDTLS QL+YPQ+PLFRTM SDCLG P    GQN + 
Sbjct: 742  VLYQSQKHSSQAIGFSTTNPNIRVDTLSHQLHYPQKPLFRTMASDCLGKPDNSLGQNKIS 801

Query: 1442 AKP---EYFNGQNAIVAVNVHHGYNQEDSLVMNRASLERGMFRTEHIRSYKAEVDNMELF 1272
              P   E++NGQNAIVAVNVH GYNQEDSLVMNRASL+RGMFR+EHIRSYK+E+DN E  
Sbjct: 802  KIPPKAEFYNGQNAIVAVNVHLGYNQEDSLVMNRASLQRGMFRSEHIRSYKSEIDNKESS 861

Query: 1271 ETKRLKVKDRVDFGKAQSKIGRVDSLDDDGFPYIGANLQTGDIVIGRCAESGTDHSIKLK 1092
            + KR K +D V+F K QSKIGRVDSLDDDGFPY+GANLQ+GDI+IG+ AESG D+S+KLK
Sbjct: 862  DKKR-KPEDIVNFAKLQSKIGRVDSLDDDGFPYVGANLQSGDIIIGKGAESGADNSVKLK 920

Query: 1091 HTEKGKVQKVVLTANDEGQNFAVVSLRQIRSPILGDKFSSMHGQKGVVGLLESQENFPFT 912
            HTE+G VQKVVL++NDEG+NFAVVSLRQ+RSP+LGDKFSSMHGQKGV+G LESQENFPFT
Sbjct: 921  HTERGYVQKVVLSSNDEGKNFAVVSLRQVRSPVLGDKFSSMHGQKGVLGFLESQENFPFT 980

Query: 911  HQGIVPDIVINPHAFPTRQTPGQLLEAALGKGIACGGSVRYATPFTTPSIDEITNQLHRA 732
             QGIVPDIVINPHAFP+RQTPGQLLEAALGKGIACGG +R ATPF+TPS+D IT QLHRA
Sbjct: 981  RQGIVPDIVINPHAFPSRQTPGQLLEAALGKGIACGGILRQATPFSTPSVDAITEQLHRA 1040

Query: 731  GFSRWGSERVYNGQSGEMMRSLIFMGPTFYQRLNHMAEDKVKYRNTGPVHPLTRQPVADR 552
            GFSRWG+ERVYNG++GEM+RSLIFMGPTFYQRL+HM+EDKVK+RNTGPVHPLTRQPVADR
Sbjct: 1041 GFSRWGNERVYNGRTGEMVRSLIFMGPTFYQRLHHMSEDKVKFRNTGPVHPLTRQPVADR 1100

Query: 551  KRFGGVKFGEMERDCLLAHGASANLHERLFTLSDFSQMHVCNKCDNIANVIQRSVQGGNS 372
            KRFGG+KFGEMERDCL+AHGASANL+ERLFTLSD SQ+H+C+KC N+ANVI R V GG  
Sbjct: 1101 KRFGGIKFGEMERDCLIAHGASANLYERLFTLSDSSQIHICSKCKNVANVILRPVSGGR- 1159

Query: 371  KLRGAYCRFCDSAENIVKVSLPYGAKLLCQELFSMGICVKFGTEHC 234
            K+RG YCR C+SA++IV   +PYGAKLLCQELFSMGI +KF T+ C
Sbjct: 1160 KIRGPYCRHCESADDIVVAHVPYGAKLLCQELFSMGINLKFETQLC 1205