BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00009728
         (583 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002299552.2| hypothetical protein POPTR_0001s08940g [Popu...   143   3e-32
ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citr...   139   7e-31
ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containi...   138   1e-30
ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citr...   137   2e-30
ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis tha...   137   2e-30
ref|XP_002892433.1| pentatricopeptide repeat-containing protein ...   136   5e-30
ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Caps...   135   1e-29
ref|XP_002531691.1| pentatricopeptide repeat-containing protein,...   135   1e-29
ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Caps...   134   1e-29
ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containi...   134   2e-29
ref|XP_002876985.1| pentatricopeptide repeat-containing protein ...   134   2e-29
ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containi...   134   2e-29
gb|AEP33764.1| organelle transcript processing 82, partial [Iber...   133   3e-29
gb|AEP33761.1| organelle transcript processing 82, partial [Cruc...   133   3e-29
ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [A...   133   4e-29
ref|XP_007029178.1| Pentatricopeptide repeat (PPR) superfamily p...   133   4e-29
ref|NP_189297.1| pentatricopeptide repeat-containing protein [Ar...   133   4e-29
emb|CBI35966.3| unnamed protein product [Vitis vinifera]              133   4e-29
ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containi...   133   4e-29
gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]     132   5e-29

>ref|XP_002299552.2| hypothetical protein POPTR_0001s08940g [Populus trichocarpa]
           gi|550346861|gb|EEE84357.2| hypothetical protein
           POPTR_0001s08940g [Populus trichocarpa]
          Length = 505

 Score =  143 bits (361), Expect = 3e-32
 Identities = 76/168 (45%), Positives = 109/168 (64%), Gaps = 1/168 (0%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSML-HENTDTLLFNKFTF 330
           ++NY  S+FN      ++F YN +IR      +P+ A  LFYSML + N+     NK TF
Sbjct: 74  NINYAQSIFN-FDKNPNTFAYNVMIRGYAQREKPENALSLFYSMLCNANSGP---NKLTF 129

Query: 329 PSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPV 150
           P +LK+C+Q+    EG+QVHG V K G   DL+V+NSLI MY+ CG I  AC+VF++I  
Sbjct: 130 PFVLKACSQVRAIEEGKQVHGLVFKHGLSEDLFVQNSLINMYSSCGLIGFACQVFNKI-- 187

Query: 149 KDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
            D +VV+WN+MI+ LV  G ++   ++FD M  R++V+WNC+I GY K
Sbjct: 188 DDLDVVSWNSMISGLVDLGFVEEGKQMFDRMSKRSLVTWNCLIDGYVK 235



 Score = 63.5 bits (153), Expect = 4e-08
 Identities = 33/101 (32%), Positives = 56/101 (55%)
 Frame = -3

Query: 341 KFTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFD 162
           +FT  S+L +C+ L    +G+ +   + K+G D D  +  +L+ M+AKCG IE A  VF 
Sbjct: 250 RFTMVSVLTACSYLGALEQGEWMQAHIEKNGIDVDSVLGTALVEMFAKCGSIERALSVFK 309

Query: 161 EIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVV 39
            I  ++++V  WN++I+ L   G    A  +F +M   N +
Sbjct: 310 SI--EERDVGAWNSIIHKLAAHGHGQEAFAIFSDMLRSNTL 348


>ref|XP_006437177.1| hypothetical protein CICLE_v10031197mg [Citrus clementina]
           gi|557539373|gb|ESR50417.1| hypothetical protein
           CICLE_v10031197mg [Citrus clementina]
          Length = 534

 Score =  139 bits (349), Expect = 7e-31
 Identities = 72/167 (43%), Positives = 105/167 (62%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFP 327
           D+NY   +F Q+    + FI+N++IR  +  + P+ A LLF  ML   T  +   + T+P
Sbjct: 68  DINYAYLVFTQIK-KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLV--TSPIQPQRLTYP 124

Query: 326 SLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVK 147
           SL K+ AQL    +G Q+HG V+K G +FD ++ N++IYMYA CG +  A  +FDE+   
Sbjct: 125 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLIFDEVDT- 183

Query: 146 DKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
           + +VV WN+MI  L K G+ID + +LFD+M  RN VSWN MI GY +
Sbjct: 184 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 230



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 45/155 (29%), Positives = 85/155 (54%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFP 327
           +++ +  LF+++ +  ++  +NS+I       + ++A  LF  M  +N      ++FT  
Sbjct: 202 EIDESRRLFDKM-VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP---SEFTMV 257

Query: 326 SLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVK 147
           SLL +CA+L    +G+ +H F++ + F+ +  V  ++I MY KCG  E A +VF+ +P  
Sbjct: 258 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-- 315

Query: 146 DKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNV 42
            K +  WN+M+  L  +G  + A KLF  +   N+
Sbjct: 316 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 350


>ref|XP_006484869.1| PREDICTED: pentatricopeptide repeat-containing protein At2g42920,
           chloroplastic-like [Citrus sinensis]
          Length = 534

 Score =  138 bits (347), Expect = 1e-30
 Identities = 72/167 (43%), Positives = 105/167 (62%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFP 327
           D+NY   +F Q+    + FI+N++IR  +  + P+ A LLF  ML   T  +   + T+P
Sbjct: 68  DINYAYLVFTQIK-KPNLFIWNTIIRGFSQSSTPRNAILLFIDMLV--TSPIQPQRLTYP 124

Query: 326 SLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVK 147
           SL K+ AQL    +G Q+HG V+K G +FD ++ N++IYMYA CG +  A  +FDE+   
Sbjct: 125 SLFKAYAQLGLARDGAQLHGRVVKQGLEFDQFIHNTIIYMYANCGFLSEARLMFDEVDT- 183

Query: 146 DKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
           + +VV WN+MI  L K G+ID + +LFD+M  RN VSWN MI GY +
Sbjct: 184 EFDVVAWNSMIIGLAKCGEIDESRRLFDKMVSRNTVSWNSMISGYVR 230



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 45/155 (29%), Positives = 85/155 (54%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFP 327
           +++ +  LF+++ +  ++  +NS+I       + ++A  LF  M  +N      ++FT  
Sbjct: 202 EIDESRRLFDKM-VSRNTVSWNSMISGYVRNVKFKEALELFREMQEQNIKP---SEFTMV 257

Query: 326 SLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVK 147
           SLL +CA+L    +G+ +H F++ + F+ +  V  ++I MY KCG  E A +VF+ +P  
Sbjct: 258 SLLNACAKLGAIRQGEWIHNFLVTNCFELNTIVVTAIIDMYCKCGCPERALQVFNTVP-- 315

Query: 146 DKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNV 42
            K +  WN+M+  L  +G  + A KLF  +   N+
Sbjct: 316 KKGLSCWNSMVFGLAMNGYENEAIKLFSGLQSSNL 350


>ref|XP_006447757.1| hypothetical protein CICLE_v10014482mg [Citrus clementina]
           gi|568830445|ref|XP_006469509.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At1g08070-like [Citrus sinensis]
           gi|557550368|gb|ESR60997.1| hypothetical protein
           CICLE_v10014482mg [Citrus clementina]
          Length = 689

 Score =  137 bits (346), Expect = 2e-30
 Identities = 69/169 (40%), Positives = 109/169 (64%)
 Frame = -3

Query: 512 IHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFT 333
           I++++Y  S+F+++    S  +YN LI+      +  +A  LF  +LH     LL + FT
Sbjct: 68  INNLHYARSIFDRVLQHPSLVLYNLLIKCYVFNQRSHEALTLFCDLLHR---FLLPDNFT 124

Query: 332 FPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIP 153
            P ++K  A+L    EG+Q+HG V K GF FD +V +SL+ MYAK GEI+   +VFD + 
Sbjct: 125 LPCVIKGAARLGAIKEGKQIHGLVFKLGFGFDKFVLSSLVSMYAKFGEIDLGRRVFDVL- 183

Query: 152 VKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
             DK++V+WN +I+  VK G+++ A KLFDEMP+R++ SW C++ G++K
Sbjct: 184 -DDKDLVSWNCLIDGYVKKGEVEVAMKLFDEMPERDLFSWTCLVDGFSK 231



 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 52/150 (34%), Positives = 73/150 (48%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFP 327
           DV+    LFN + I      +NS+I    L  +  +A   F +ML  +   +L N  T  
Sbjct: 265 DVDSACELFNDMEI-RDLITWNSMIAGYELNGRFMEALEFFETMLRGD---VLPNDATLV 320

Query: 326 SLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVK 147
           S L + A L    +G+ +H +++K+GF  D  +   LI MY+KCG IESA  VF  I   
Sbjct: 321 SALSAVAGLAVLNKGRWMHSYIVKNGFVVDGVLGTLLIQMYSKCGSIESALTVFRAI--S 378

Query: 146 DKNVVTWNTMINALVKSGDIDSASKLFDEM 57
            K V  W  MI  L   G    A  LF++M
Sbjct: 379 KKKVGHWTAMIVGLGMHGMATQALYLFNKM 408


>ref|NP_172286.1| chloroplast RNA editing factor [Arabidopsis thaliana]
           gi|75174869|sp|Q9LN01.1|PPR21_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At1g08070 gi|8778839|gb|AAF79838.1|AC026875_18 T6D22.15
           [Arabidopsis thaliana] gi|332190118|gb|AEE28239.1|
           chloroplast RNA editing factor [Arabidopsis thaliana]
          Length = 741

 Score =  137 bits (346), Expect = 2e-30
 Identities = 85/216 (39%), Positives = 115/216 (53%), Gaps = 24/216 (11%)
 Frame = -3

Query: 581 NPQLLRILHSCCT-----VFQSSKNSISIHDVNYTLSLFNQLPILSSSF----------- 450
           N   L +LH+C T     +  +    I +H+ NY LS   +  ILS  F           
Sbjct: 33  NHPSLSLLHNCKTLQSLRIIHAQMIKIGLHNTNYALSKLIEFCILSPHFEGLPYAISVFK 92

Query: 449 --------IYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCAQLYG 294
                   I+N++ R   L + P  A  L+  M+      LL N +TFP +LKSCA+   
Sbjct: 93  TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG---LLPNSYTFPFVLKSCAKSKA 149

Query: 293 TGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTWNTMI 114
             EGQQ+HG VLK G D DLYV  SLI MY + G +E A KVFD+ P +D  VV++  +I
Sbjct: 150 FKEGQQIHGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDKSPHRD--VVSYTALI 207

Query: 113 NALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
                 G I++A KLFDE+P ++VVSWN MI GY +
Sbjct: 208 KGYASRGYIENAQKLFDEIPVKDVVSWNAMISGYAE 243



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 46/143 (32%), Positives = 78/143 (54%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           LF+++P+      +N++I         ++A  LF  M+  N      ++ T  +++ +CA
Sbjct: 222 LFDEIPV-KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP---DESTMVTVVSACA 277

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           Q      G+QVH ++   GF  +L + N+LI +Y+KCGE+E+AC +F+ +P KD  V++W
Sbjct: 278 QSGSIELGRQVHLWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFERLPYKD--VISW 335

Query: 125 NTMINALVKSGDIDSASKLFDEM 57
           NT+I           A  LF EM
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEM 358



 Score = 72.4 bits (176), Expect = 8e-11
 Identities = 52/145 (35%), Positives = 74/145 (51%), Gaps = 2/145 (1%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           LF +LP       +N+LI   T +N  ++A LLF  ML         N  T  S+L +CA
Sbjct: 323 LFERLPY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP---NDVTMLSILPACA 378

Query: 305 QLYGTGEGQQVHGFVLK--SGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVV 132
            L     G+ +H ++ K   G      +R SLI MYAKCG+IE+A +VF+ I    K++ 
Sbjct: 379 HLGAIDIGRWIHVYIDKRLKGVTNASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLS 436

Query: 131 TWNTMINALVKSGDIDSASKLFDEM 57
           +WN MI      G  D++  LF  M
Sbjct: 437 SWNAMIFGFAMHGRADASFDLFSRM 461


>ref|XP_002892433.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297338275|gb|EFH68692.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 741

 Score =  136 bits (342), Expect = 5e-30
 Identities = 83/216 (38%), Positives = 115/216 (53%), Gaps = 24/216 (11%)
 Frame = -3

Query: 581 NPQLLRILHSCCTV-----FQSSKNSISIHDVNYTLSLFNQLPILSSSF----------- 450
           N   L +LH+C T+       +      +H+ NY LS   +L ++S  F           
Sbjct: 33  NHPSLSLLHNCKTLQSLRLIHAQMIKTGLHNTNYALSKLLELCVISPHFDGLPYAISVFE 92

Query: 449 --------IYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCAQLYG 294
                   I+N++ R   L + P  A  L+  M+      LL N +TFP LLKSCA+   
Sbjct: 93  TIQEPNLLIWNTMFRGHALSSDPVSALKLYVCMISLG---LLPNSYTFPFLLKSCAKSKA 149

Query: 293 TGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTWNTMI 114
             EGQQ+HG VLK G+D DL+V  SLI +Y + G +E A KVFD  P +D  VV++  +I
Sbjct: 150 FKEGQQIHGHVLKLGYDLDLFVHTSLISVYVQNGRLEDARKVFDRSPHRD--VVSYTALI 207

Query: 113 NALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
                 G I+SA KLFDE+P ++VVSWN MI GY +
Sbjct: 208 KGYASRGYIESAQKLFDEIPVKDVVSWNAMISGYAE 243



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 45/143 (31%), Positives = 77/143 (53%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           LF+++P+      +N++I         ++A  LF  M+  N      ++ T  +++ +CA
Sbjct: 222 LFDEIPV-KDVVSWNAMISGYAETGNYKEALELFKEMMKTNIRP---DESTMVTVVSACA 277

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           Q      G+QVH ++   GF  +L + NSL+ +Y+KCGE+E+AC +F+ +  KD  V++W
Sbjct: 278 QSGSIELGRQVHSWIDDHGFGSNLKIVNSLMDLYSKCGELETACGLFEGLLYKD--VISW 335

Query: 125 NTMINALVKSGDIDSASKLFDEM 57
           NT+I           A  LF EM
Sbjct: 336 NTLIGGYTHMNLYKEALLLFQEM 358



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 49/133 (36%), Positives = 71/133 (53%), Gaps = 3/133 (2%)
 Frame = -3

Query: 446 YNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCAQLYGTGEGQQVHG 267
           +N+LI   T +N  ++A LLF  ML         N  T  S+L +CA L     G+ +H 
Sbjct: 335 WNTLIGGYTHMNLYKEALLLFQEMLRSGERP---NDVTMLSILPACAHLGAIDIGRWIHV 391

Query: 266 FV---LKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTWNTMINALVKS 96
           ++   LKS  +    +R SLI MYAKCG+IE+A +VF+ I    K++ +WN MI      
Sbjct: 392 YIDKRLKSATNASS-LRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLSSWNAMIFGFAMH 448

Query: 95  GDIDSASKLFDEM 57
           G  D+A  +F  M
Sbjct: 449 GRADAAFDIFSRM 461


>ref|XP_006291116.1| hypothetical protein CARUB_v10017228mg [Capsella rubella]
           gi|482559823|gb|EOA24014.1| hypothetical protein
           CARUB_v10017228mg [Capsella rubella]
          Length = 454

 Score =  135 bits (339), Expect = 1e-29
 Identities = 69/172 (40%), Positives = 112/172 (65%)
 Frame = -3

Query: 521 SISIHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFN 342
           S S  +  Y   +FNQL    S+F +N +IR+L++ ++P++A LLF  ML+  +    F+
Sbjct: 62  SSSFGETKYASLVFNQLQS-PSTFTWNLMIRSLSVNHKPREALLLFILMLNHQSQ---FD 117

Query: 341 KFTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFD 162
           KFTFP ++K+C        G QVHG  +K+GF  D++ +N+L+ +Y KCG+++   KVFD
Sbjct: 118 KFTFPFVIKACLASSSLRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKLDLGRKVFD 177

Query: 161 EIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
           ++P   +++V+W T+++ LV +  +DSA  +F++MP RNVVSW  MI  Y K
Sbjct: 178 KMP--GRSIVSWTTLLHGLVSNCQLDSAKIVFNQMPTRNVVSWTAMITAYVK 227



 Score = 86.3 bits (212), Expect = 6e-15
 Identities = 52/145 (35%), Positives = 83/145 (57%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           +FNQ+P   +   + ++I A     +P +AF LF  M     D +  N+FT  +LL++  
Sbjct: 206 VFNQMPT-RNVVSWTAMITAYVKNRRPDEAFQLFRRM---QVDDVKPNEFTIVNLLQAST 261

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           QL     G+ VH +  K+GF  D ++  +LI MY+KCG ++ A KVFD   ++ K++ TW
Sbjct: 262 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD--VMQSKSLATW 319

Query: 125 NTMINALVKSGDIDSASKLFDEMPD 51
           N+MI +L   G  + A  LFD+M +
Sbjct: 320 NSMITSLGVHGCGEEALCLFDDMEE 344


>ref|XP_002531691.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223528667|gb|EEF30682.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 434

 Score =  135 bits (339), Expect = 1e-29
 Identities = 72/173 (41%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
 Frame = -3

Query: 512 IHDVNYTLSLFNQL--PILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNK 339
           I+++ Y LS+FN++  P L    +YN LI+          A  LF  +LHE      FN 
Sbjct: 55  INNLEYVLSIFNKIQEPAL---VLYNILIKCYIQNQLSHDAITLFSQLLHE------FNP 105

Query: 338 --FTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVF 165
             FT P ++K CA+L+ T EG+Q+HG VLK GF  + +V +SL+ MY+KC +I+SA KVF
Sbjct: 106 DGFTLPCVIKGCARLHATKEGKQIHGLVLKLGFGLNKFVSSSLVNMYSKCKDIDSAKKVF 165

Query: 164 DEIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
             + + DK++V+WN++I+  VK G ++   KLF+EMP+R++ SW  +I G++K
Sbjct: 166 --LSMDDKDLVSWNSLIDGYVKCGQVELGMKLFEEMPERDLFSWTVLIDGFSK 216



 Score = 66.6 bits (161), Expect = 5e-09
 Identities = 46/143 (32%), Positives = 72/143 (50%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           LF+++P   +   +NS++    L  + ++A  LF +ML  +      N  T  S   + +
Sbjct: 257 LFDKMPE-KNLISWNSMVAGYDLNERFKEALDLFLTMLERDFTP---NHATLVSTFSAVS 312

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
            L     G+ +H +++K+GF  D  +  SLI MY+KCG IESA  VF  I    K +  W
Sbjct: 313 GLASLSTGKWMHSYMVKNGFQLDGVLATSLINMYSKCGNIESALSVFQLI--TKKKLGHW 370

Query: 125 NTMINALVKSGDIDSASKLFDEM 57
             +I  L   G  D+A + F EM
Sbjct: 371 TAIIVGLGMHGMADNALEFFHEM 393


>ref|XP_006306854.1| hypothetical protein CARUB_v10008399mg [Capsella rubella]
           gi|482575565|gb|EOA39752.1| hypothetical protein
           CARUB_v10008399mg [Capsella rubella]
          Length = 740

 Score =  134 bits (338), Expect = 1e-29
 Identities = 82/216 (37%), Positives = 114/216 (52%), Gaps = 24/216 (11%)
 Frame = -3

Query: 581 NPQLLRILHSCCT-----VFQSSKNSISIHDVNYTLSLFNQLPILSSSF----------- 450
           N   L +LH+C T     +  +      +H+ NY LS   +  +LS  F           
Sbjct: 32  NHPSLSLLHNCNTLQSLRIIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLTYAISVFE 91

Query: 449 --------IYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCAQLYG 294
                   I+N++ R   L + P  A  L+  M+      L+ N +TFP LLKSCA+   
Sbjct: 92  SIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG---LVPNSYTFPFLLKSCAKSRA 148

Query: 293 TGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTWNTMI 114
             EGQQ+HG VLK G D DLYV  SLI MY K G +E A KVFD+   +D  VV++  +I
Sbjct: 149 FREGQQIHGHVLKLGCDLDLYVHTSLIAMYVKNGRLEDARKVFDQSSHRD--VVSYTALI 206

Query: 113 NALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
                +G I+SA K+FDE+P ++VVSWN +I GY +
Sbjct: 207 KGYASNGYIESAQKMFDEIPVKDVVSWNALISGYAE 242



 Score = 73.2 bits (178), Expect = 5e-11
 Identities = 44/143 (30%), Positives = 74/143 (51%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           +F+++P+      +N+LI         ++A  LF  M+  N      ++ T  ++L +C 
Sbjct: 221 MFDEIPV-KDVVSWNALISGYAETGNYKEALELFKEMMQTNVKP---DESTMVTVLSACG 276

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           Q      G+QVH ++   GF  +L + N+LI +Y KCGE+E+A  +F+ +  KD  V++W
Sbjct: 277 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETASGLFEGLSYKD--VISW 334

Query: 125 NTMINALVKSGDIDSASKLFDEM 57
           NT+I           A  LF EM
Sbjct: 335 NTLIGGYTHMNLYKEALLLFQEM 357



 Score = 69.7 bits (169), Expect = 5e-10
 Identities = 46/132 (34%), Positives = 72/132 (54%), Gaps = 2/132 (1%)
 Frame = -3

Query: 446 YNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCAQLYGTGEGQQVHG 267
           +N+LI   T +N  ++A LLF  ML       + N+ T  S+L +CA L     G+ +H 
Sbjct: 334 WNTLIGGYTHMNLYKEALLLFQEMLRLGE---IPNEVTMLSILPACAHLGAIDIGRWIHV 390

Query: 266 FVLK--SGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTWNTMINALVKSG 93
           ++ K   G      +R SLI MYAKCG+IE+A +VFD   + ++++ +WN MI      G
Sbjct: 391 YIDKRLKGVSNPSSLRTSLIDMYAKCGDIEAAQQVFDS--MLNRSLSSWNAMIFGFAMHG 448

Query: 92  DIDSASKLFDEM 57
             ++A  +F  M
Sbjct: 449 RANAAFDIFSRM 460


>ref|XP_004143583.1| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
           gi|449504924|ref|XP_004162332.1| PREDICTED:
           pentatricopeptide repeat-containing protein
           At5g66520-like [Cucumis sativus]
          Length = 595

 Score =  134 bits (337), Expect = 2e-29
 Identities = 71/177 (40%), Positives = 112/177 (63%)
 Frame = -3

Query: 545 TVFQSSKNSISIHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHE 366
           T F +   S  + D+ Y   +FN +    ++F++N++IRA +  ++P+ AFL +  ML  
Sbjct: 24  TKFLTLCTSPHVGDLLYAQRVFNGITS-PNTFMWNAIIRAYSNSDEPELAFLSYQQML-- 80

Query: 365 NTDTLLFNKFTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEI 186
            + ++  N +TFP LL++C  L   GE  QVHG V+K GF  D++  N+L+++YA CGEI
Sbjct: 81  -SSSVPHNSYTFPFLLRACRNLLAMGEALQVHGLVIKLGFGSDVFALNALLHVYALCGEI 139

Query: 185 ESACKVFDEIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHG 15
             A ++FD IP +D   V+WN MI+  +KSGD+ +A  +F +MP +NVVSW  +I G
Sbjct: 140 HCARQLFDNIPERD--AVSWNIMIDGYIKSGDVKTAYGVFLDMPLKNVVSWTSLISG 194



 Score = 72.0 bits (175), Expect = 1e-10
 Identities = 46/150 (30%), Positives = 71/150 (47%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFP 327
           DV     +F  +P L +   + SLI  L    Q  +A  L Y M +   +    +     
Sbjct: 169 DVKTAYGVFLDMP-LKNVVSWTSLISGLVEAGQSVEALSLCYEMQNAGFE---LDGVAIA 224

Query: 326 SLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVK 147
           SLL +CA L    +G+ +H +VL +G D D  +  +L+ MY KCG++E A  VF ++   
Sbjct: 225 SLLTACANLGALDQGRWLHFYVLNNGVDVDRVIGCALVNMYVKCGDMEEALSVFGKLKGN 284

Query: 146 DKNVVTWNTMINALVKSGDIDSASKLFDEM 57
            K+V  W  MI+     G    A + F+ M
Sbjct: 285 QKDVYIWTAMIDGFAIHGRGVEALEWFNRM 314


>ref|XP_002876985.1| pentatricopeptide repeat-containing protein [Arabidopsis lyrata
           subsp. lyrata] gi|297322823|gb|EFH53244.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           lyrata subsp. lyrata]
          Length = 451

 Score =  134 bits (337), Expect = 2e-29
 Identities = 71/172 (41%), Positives = 108/172 (62%)
 Frame = -3

Query: 521 SISIHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFN 342
           S S  +  Y   +FNQL    S+F +N +IR+L+L ++P++A LLF  ML        F+
Sbjct: 62  SSSFGETQYASLVFNQLQS-PSTFTWNLMIRSLSLNHKPREALLLFILMLSHQPQ---FD 117

Query: 341 KFTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFD 162
           KFTFP ++K+C        G QVHG  +K+GF  D++ +N+L+ +Y KCG+ +   KVFD
Sbjct: 118 KFTFPFVIKACLASSSLRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDCGRKVFD 177

Query: 161 EIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
           ++P   +++V+W TM+  LV +  +DSA  +F++MP RNVVSW  MI  Y K
Sbjct: 178 KMP--GRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPTRNVVSWTAMITAYVK 227



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 53/145 (36%), Positives = 83/145 (57%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           +FNQ+P   +   + ++I A     +P +AF LF  M     D +  N+FT  +LL++  
Sbjct: 206 VFNQMPT-RNVVSWTAMITAYVKNRRPDEAFQLFRRM---QVDDVKPNEFTIVNLLQAST 261

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           QL     G+ VH +  K+GF  D Y+  +LI MY+KCG ++ A KVFD   ++ K++ TW
Sbjct: 262 QLGSLSMGRWVHDYAHKNGFVLDCYLGTALIDMYSKCGSLQDARKVFD--VMQSKSLATW 319

Query: 125 NTMINALVKSGDIDSASKLFDEMPD 51
           N+MI +L   G  + A  LF+EM +
Sbjct: 320 NSMITSLGVHGCGEEALYLFEEMEE 344


>ref|XP_003516564.2| PREDICTED: pentatricopeptide repeat-containing protein
           At5g66520-like [Glycine max]
          Length = 580

 Score =  134 bits (336), Expect = 2e-29
 Identities = 65/171 (38%), Positives = 110/171 (64%)
 Frame = -3

Query: 518 ISIHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNK 339
           I + ++ YT  +F+ +    ++ I+N+++RA +  N P+ A LL++ MLH +      N 
Sbjct: 119 IELVNLAYTRVVFDSISS-PNTVIWNTMLRAYSNSNDPEAALLLYHQMLHNSVP---HNS 174

Query: 338 FTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDE 159
           +TFP LLK+C+ L    E QQ+H  ++K GF  ++Y  NSL+ +YA  G I+SA  +F++
Sbjct: 175 YTFPFLLKACSALSAFEETQQIHAHIIKRGFGLEVYATNSLLRVYAISGNIQSAHVLFNQ 234

Query: 158 IPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
           +P +D  +V+WN MI+  +K G++D A K+F  MP++NV+SW  MI G+ +
Sbjct: 235 LPTRD--IVSWNIMIDGYIKFGNLDMAYKIFQAMPEKNVISWTTMIVGFVR 283


>gb|AEP33764.1| organelle transcript processing 82, partial [Iberis amara]
          Length = 666

 Score =  133 bits (335), Expect = 3e-29
 Identities = 85/209 (40%), Positives = 113/209 (54%), Gaps = 19/209 (9%)
 Frame = -3

Query: 575 QLLRILHSCCTVFQSSKNSISIHDVNYTLSLFNQLPILSSSF------------------ 450
           Q LR++H+     Q  K  +  H+ NY LS   +  ILS  F                  
Sbjct: 4   QSLRMIHA-----QMIKTGL--HNTNYALSKLIEFCILSPHFDGLPYAISVFETIQEPNL 56

Query: 449 -IYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCAQLYGTGEGQQV 273
            I+N++ R   L + P  A  L+  M+      LL N +TFP LLKSCA+     EGQQ+
Sbjct: 57  LIWNTMFRGHALSSDPVSALKLYVCMISLG---LLPNSYTFPFLLKSCAKSKAFKEGQQI 113

Query: 272 HGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTWNTMINALVKSG 93
           HG VLK G D DLYV  SLI MY + G +E A KVFDE P +D  VV++  +I      G
Sbjct: 114 HGHVLKLGCDLDLYVHTSLISMYVQNGRLEDAHKVFDESPHRD--VVSYTALIKGYASRG 171

Query: 92  DIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
            I++A K+FDE+P ++VVSWN MI GY +
Sbjct: 172 YIENAQKMFDEIPVKDVVSWNAMISGYAE 200



 Score = 79.0 bits (193), Expect = 9e-13
 Identities = 45/143 (31%), Positives = 78/143 (54%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           +F+++P+      +N++I         ++A  LF  M+  N      ++ T  +++ +CA
Sbjct: 179 MFDEIPV-KDVVSWNAMISGYAETGNYKEALELFKDMMKTNVRP---DESTMVTVVSACA 234

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           Q      G+QVH ++   GF  +L + N+LI +Y+KCGE+E+AC +F+ +P KD  V++W
Sbjct: 235 QSGSIELGRQVHSWIDDHGFGSNLKIVNALIDLYSKCGELETACGLFEGLPYKD--VISW 292

Query: 125 NTMINALVKSGDIDSASKLFDEM 57
           NT+I           A  LF EM
Sbjct: 293 NTLIGGYTHMNLYKEALLLFQEM 315



 Score = 70.1 bits (170), Expect = 4e-10
 Identities = 51/145 (35%), Positives = 73/145 (50%), Gaps = 2/145 (1%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           LF  LP       +N+LI   T +N  ++A LLF  ML         N  T  S+L +CA
Sbjct: 280 LFEGLPY-KDVISWNTLIGGYTHMNLYKEALLLFQEMLRSGETP---NDVTMLSILPACA 335

Query: 305 QLYGTGEGQQVHGFVLK--SGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVV 132
            L     G+ +H ++ K   G      +R SLI MYAKCG+IE+A +VF+ I    K++ 
Sbjct: 336 HLGAIDIGRWIHVYIDKRLKGVANASSLRTSLIDMYAKCGDIEAAHQVFNSI--LHKSLS 393

Query: 131 TWNTMINALVKSGDIDSASKLFDEM 57
           +WN MI      G  D++  +F  M
Sbjct: 394 SWNAMIFGFAMHGRADASFDIFSRM 418


>gb|AEP33761.1| organelle transcript processing 82, partial [Crucihimalaya
           wallichii]
          Length = 710

 Score =  133 bits (335), Expect = 3e-29
 Identities = 83/216 (38%), Positives = 113/216 (52%), Gaps = 24/216 (11%)
 Frame = -3

Query: 581 NPQLLRILHSCCTV-----FQSSKNSISIHDVNYTLSLFNQLPILSSSF----------- 450
           N   L +LH+C T+       +      +H+ NY LS   +  +LS  F           
Sbjct: 2   NHPSLSLLHNCKTLQSLRMIHAQMIKTGLHNTNYALSKLIEFCVLSPHFDGLPYAISVFE 61

Query: 449 --------IYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCAQLYG 294
                   I+N++ R   L + P  A  L+  M+      LL N +TFP LLKSCA+   
Sbjct: 62  TIQEPNLLIWNTMFRGHALSSDPVSALYLYVCMISLG---LLPNCYTFPFLLKSCAKSKA 118

Query: 293 TGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTWNTMI 114
             EGQQ+HG VLK G+D DLYV  SLI MY + G +E A KVFD+   +D  VV++  +I
Sbjct: 119 FREGQQIHGHVLKLGYDLDLYVHTSLISMYVQNGRLEDARKVFDQSSHRD--VVSYTALI 176

Query: 113 NALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
                 G I SA K+FDE+P ++VVSWN MI GY +
Sbjct: 177 TGYASKGYIASAQKMFDEIPIKDVVSWNAMISGYAE 212



 Score = 77.8 bits (190), Expect = 2e-12
 Identities = 46/143 (32%), Positives = 76/143 (53%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           +F+++PI      +N++I         ++A  LF  M+  N      ++ T  S++ +CA
Sbjct: 191 MFDEIPI-KDVVSWNAMISGYAETGNNKEALELFKEMMKTNVRP---DESTMVSVVSACA 246

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           Q      G+QVH ++   GF  +L + N+LI +Y KCGE+E+AC +F+ +  KD  V++W
Sbjct: 247 QSASIELGRQVHSWIDDHGFGSNLKIVNALIDLYIKCGEVETACGLFEGLSYKD--VISW 304

Query: 125 NTMINALVKSGDIDSASKLFDEM 57
           NT+I           A  LF EM
Sbjct: 305 NTLIGGYTHMNLYKEALLLFQEM 327


>ref|XP_006844721.1| hypothetical protein AMTR_s00016p00252780 [Amborella trichopoda]
           gi|548847192|gb|ERN06396.1| hypothetical protein
           AMTR_s00016p00252780 [Amborella trichopoda]
          Length = 428

 Score =  133 bits (334), Expect = 4e-29
 Identities = 70/176 (39%), Positives = 114/176 (64%), Gaps = 3/176 (1%)
 Frame = -3

Query: 524 NSISIHD-VNYTLSLFNQL--PILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDT 354
           N  SIH  +++   +FNQ+  P+   +F +N++IRA    N P++A L++  M+      
Sbjct: 71  NLCSIHQKIDHATLVFNQIENPL---TFTWNTMIRAYFKSNYPEEAILMYNLMVIHG--- 124

Query: 353 LLFNKFTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESAC 174
            L +KFT+P ++K+C       +G+++HG  +K+G   D++++N+L+ +Y KC E   A 
Sbjct: 125 FLPDKFTYPFVIKACVAFSSLEKGKEIHGRAIKAGMVPDIFLQNTLMELYMKCNEKTLAH 184

Query: 173 KVFDEIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
           K+FD++ VK  +VV+W TM+  LV  GD+ SA ++FDEMP+RNVVSW  MIHGY +
Sbjct: 185 KLFDKMSVK--SVVSWTTMVAGLVSHGDMASARRVFDEMPERNVVSWTAMIHGYVR 238



 Score = 82.4 bits (202), Expect = 8e-14
 Identities = 53/154 (34%), Positives = 79/154 (51%)
 Frame = -3

Query: 518 ISIHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNK 339
           +S  D+     +F+++P   +   + ++I      NQP +A  LF  ML  N      N+
Sbjct: 206 VSHGDMASARRVFDEMPE-RNVVSWTAMIHGYVRNNQPHEALELFILMLRANVRP---NE 261

Query: 338 FTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDE 159
           FT  SLL  C  L     G+ VH F+ KSGF+  +Y+  +LI MY+ CG I  A  VFD 
Sbjct: 262 FTIVSLLLVCTSLNSLRLGRWVHEFMAKSGFELSVYLGTALIDMYSNCGSINDAKNVFD- 320

Query: 158 IPVKDKNVVTWNTMINALVKSGDIDSASKLFDEM 57
             + +++V TWN+MI +L   G    A  +F  M
Sbjct: 321 -GMSERSVATWNSMITSLGVHGKGKEALNVFGAM 353


>ref|XP_007029178.1| Pentatricopeptide repeat (PPR) superfamily protein [Theobroma
           cacao] gi|508717783|gb|EOY09680.1| Pentatricopeptide
           repeat (PPR) superfamily protein [Theobroma cacao]
          Length = 626

 Score =  133 bits (334), Expect = 4e-29
 Identities = 65/166 (39%), Positives = 107/166 (64%)
 Frame = -3

Query: 503 VNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPS 324
           ++Y   +F+Q+    + FI+N+LI+  +    P Q+F  +  +L  N   +L +  +FP 
Sbjct: 72  LDYAFKIFSQIET-PNLFIFNALIKGFSACQNPHQSFHFYTQLLRAN---ILPDNLSFPF 127

Query: 323 LLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKD 144
           L+++CAQL     G Q HG ++K GF+ ++YV+NSL++MY+ CG+I++A  +F  +    
Sbjct: 128 LVRACAQLESLDMGIQAHGQIIKHGFESNVYVQNSLVHMYSTCGDIKAANAIFQRMTF-- 185

Query: 143 KNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
            NVV+W +MI  L K GD++ A KLFD MP++N+V+W+ MI GY K
Sbjct: 186 LNVVSWTSMIAGLNKVGDVEMARKLFDTMPEKNLVTWSIMISGYAK 231



 Score = 66.2 bits (160), Expect = 6e-09
 Identities = 41/152 (26%), Positives = 74/152 (48%)
 Frame = -3

Query: 512 IHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFT 333
           + DV     LF+ +P   +   ++ +I      +  ++A  LF  +  E       N+  
Sbjct: 201 VGDVEMARKLFDTMPE-KNLVTWSIMISGYAKNSYFEKAVELFQVLQEEGVQA---NETV 256

Query: 332 FPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIP 153
             S++ SCA L     G++ H ++ ++    ++ +  +L+ MYA+CG IE A  VF+E+P
Sbjct: 257 MVSVISSCAHLGAIELGEKAHEYIFRNNLSLNVILGTALVDMYARCGSIEKAIGVFEELP 316

Query: 152 VKDKNVVTWNTMINALVKSGDIDSASKLFDEM 57
            +D  V++W  +I  L   G  + A   F EM
Sbjct: 317 ERD--VLSWTALIAGLAMHGYAERALWFFSEM 346


>ref|NP_189297.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75275188|sp|Q38959.1|PP257_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At3g26630, chloroplastic; Flags: Precursor
           gi|1402883|emb|CAA66814.1| hypothetical protein
           [Arabidopsis thaliana] gi|1495263|emb|CAA66119.1| orf09
           [Arabidopsis thaliana] gi|11994298|dbj|BAB01728.1|
           unnamed protein product [Arabidopsis thaliana]
           gi|20466384|gb|AAM20509.1| unknown protein [Arabidopsis
           thaliana] gi|23198064|gb|AAN15559.1| unknown protein
           [Arabidopsis thaliana] gi|332643668|gb|AEE77189.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 455

 Score =  133 bits (334), Expect = 4e-29
 Identities = 70/172 (40%), Positives = 110/172 (63%)
 Frame = -3

Query: 521 SISIHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFN 342
           S S  +  Y   +FNQL    S+F +N +IR+L++ ++P++A LLF  M+  +     F+
Sbjct: 62  SSSFGETQYASLVFNQLQS-PSTFTWNLMIRSLSVNHKPREALLLFILMMISHQSQ--FD 118

Query: 341 KFTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFD 162
           KFTFP ++K+C        G QVHG  +K+GF  D++ +N+L+ +Y KCG+ +S  KVFD
Sbjct: 119 KFTFPFVIKACLASSSIRLGTQVHGLAIKAGFFNDVFFQNTLMDLYFKCGKPDSGRKVFD 178

Query: 161 EIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
           ++P   +++V+W TM+  LV +  +DSA  +F++MP RNVVSW  MI  Y K
Sbjct: 179 KMP--GRSIVSWTTMLYGLVSNSQLDSAEIVFNQMPMRNVVSWTAMITAYVK 228



 Score = 87.8 bits (216), Expect = 2e-15
 Identities = 52/145 (35%), Positives = 84/145 (57%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           +FNQ+P + +   + ++I A     +P +AF LF  M     D +  N+FT  +LL++  
Sbjct: 207 VFNQMP-MRNVVSWTAMITAYVKNRRPDEAFQLFRRM---QVDDVKPNEFTIVNLLQAST 262

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
           QL     G+ VH +  K+GF  D ++  +LI MY+KCG ++ A KVFD   ++ K++ TW
Sbjct: 263 QLGSLSMGRWVHDYAHKNGFVLDCFLGTALIDMYSKCGSLQDARKVFD--VMQGKSLATW 320

Query: 125 NTMINALVKSGDIDSASKLFDEMPD 51
           N+MI +L   G  + A  LF+EM +
Sbjct: 321 NSMITSLGVHGCGEEALSLFEEMEE 345


>emb|CBI35966.3| unnamed protein product [Vitis vinifera]
          Length = 624

 Score =  133 bits (334), Expect = 4e-29
 Identities = 72/173 (41%), Positives = 108/173 (62%), Gaps = 1/173 (0%)
 Frame = -3

Query: 518 ISIHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNK 339
           I +H ++Y   + +Q P   + F +NSLIRA T+   PQ +  L+  ML  +T     + 
Sbjct: 38  IDLHSIDYARFVLDQTPS-PTDFSWNSLIRAYTVHGSPQNSLFLYLKMLRSSTKP---SN 93

Query: 338 FTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDE 159
           FTFP +LK+C+ L    EG+Q+H  VL+ GF  DL+V NSLI MY KC  ++SA   +D+
Sbjct: 94  FTFPFVLKACSTLGSVLEGEQIHTHVLRLGFGSDLFVCNSLIDMYCKCFRLDSARNFWDD 153

Query: 158 IPVKDKNVVTWNTMINALVKSGDIDSASKLFDEMP-DRNVVSWNCMIHGYTKQ 3
           +  +D+  V+WN++I+  V+ G ++ A  LF+EMP  RNVV W  MI+GY K+
Sbjct: 154 MGFRDE--VSWNSIISGYVQWGQVEKARDLFEEMPMRRNVVCWTAMINGYGKE 204



 Score = 69.3 bits (168), Expect = 7e-10
 Identities = 34/105 (32%), Positives = 60/105 (57%)
 Frame = -3

Query: 371 HENTDTLLFNKFTFPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCG 192
           H    ++  N+ T  ++L +CA L     G++VH ++ ++G D ++ +  +L+ MYAKCG
Sbjct: 319 HMKAQSVKPNEITLVNVLSACAGLGALELGREVHLYLGRNGLDLNVILATALVDMYAKCG 378

Query: 191 EIESACKVFDEIPVKDKNVVTWNTMINALVKSGDIDSASKLFDEM 57
           +I+ AC +F  +   +K+V  WN MI  L   GD   +  +F +M
Sbjct: 379 KIDDACLIF--VKTSEKDVALWNAMILGLAYHGDGRDSLAVFSQM 421



 Score = 60.1 bits (144), Expect = 4e-07
 Identities = 40/148 (27%), Positives = 73/148 (49%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           LF ++P+  +   + ++I          +   LF  ML  + D +  N  T   LL +C+
Sbjct: 181 LFEEMPMRRNVVCWTAMINGYGKEGDFVEMLSLFRQML-VSADEVQPNAATMVCLLSACS 239

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
            L     G+ +  F+  +    +  +  +LI MY+KCG++E A ++FD   V  KN+ +W
Sbjct: 240 TLCNYEVGRFLSVFIDVNKIPLNTILVTALIDMYSKCGDVEKAWRIFD--GVSCKNLPSW 297

Query: 125 NTMINALVKSGDIDSASKLFDEMPDRNV 42
           N +I   V+ G ++ A  L+  M  ++V
Sbjct: 298 NAIITGCVQGGLLEEAIDLYRHMKAQSV 325


>ref|XP_002265079.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g18840-like [Vitis vinifera]
          Length = 536

 Score =  133 bits (334), Expect = 4e-29
 Identities = 68/164 (41%), Positives = 108/164 (65%)
 Frame = -3

Query: 503 VNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPS 324
           + Y  S+F+++P   +S+++N++IRA      P+ A  +F+ MLH +   +L +K+TF  
Sbjct: 58  IPYAHSIFSRIPN-PNSYMWNTIIRAYANSPTPEAALTIFHQMLHAS---VLPDKYTFTF 113

Query: 323 LLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKD 144
            LKSC    G  EG+Q+HG VLK+G   DL+++N+LI++YA CG IE A  + D   + +
Sbjct: 114 ALKSCGSFSGVEEGRQIHGHVLKTGLGDDLFIQNTLIHLYASCGCIEDARHLLDR--MLE 171

Query: 143 KNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGY 12
           ++VV+WN +++A  + G ++ A  LFDEM +RNV SWN MI GY
Sbjct: 172 RDVVSWNALLSAYAERGLMELACHLFDEMTERNVESWNFMISGY 215



 Score = 75.5 bits (184), Expect = 1e-11
 Identities = 43/143 (30%), Positives = 75/143 (52%)
 Frame = -3

Query: 485 LFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFPSLLKSCA 306
           +F + P+  +   +N++I   +   +  +  +LF  M H        +  T  S+L +CA
Sbjct: 227 VFGETPV-KNVVSWNAMITGYSHAGRFSEVLVLFEDMQHAGVKP---DNCTLVSVLSACA 282

Query: 305 QLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVKDKNVVTW 126
            +    +G+ VH ++ K+G   D +V  +L+ MY+KCG IE A +VF+    KD  + TW
Sbjct: 283 HVGALSQGEWVHAYIDKNGISIDGFVATALVDMYSKCGSIEKALEVFNSCLRKD--ISTW 340

Query: 125 NTMINALVKSGDIDSASKLFDEM 57
           N++I+ L   G    A ++F EM
Sbjct: 341 NSIISGLSTHGSGQHALQIFSEM 363


>gb|EXC34901.1| hypothetical protein L484_020017 [Morus notabilis]
          Length = 686

 Score =  132 bits (333), Expect = 5e-29
 Identities = 65/169 (38%), Positives = 107/169 (63%)
 Frame = -3

Query: 512 IHDVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFT 333
           I+ ++Y  S+F+ +P+      +N LI+      +   A  LF+ ++HE T       FT
Sbjct: 67  INSLDYARSVFDLIPV-PDLVSWNILIKCYVENQRSHDAICLFHDLVHEFTPDC----FT 121

Query: 332 FPSLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIP 153
            PS++K CA+L    EG+Q+HG V+K GF  D +V++SL+ MY++CGE+  A KVFD++ 
Sbjct: 122 LPSVIKGCARLNAVPEGKQIHGLVVKIGFGLDKFVQSSLVSMYSRCGEMGYARKVFDQMG 181

Query: 152 VKDKNVVTWNTMINALVKSGDIDSASKLFDEMPDRNVVSWNCMIHGYTK 6
            KD  +V WN +I+   + G+++ A +LFDEMP+R+  SW C++ G++K
Sbjct: 182 EKD--LVLWNCLIDGYARCGEVEIALQLFDEMPERDYFSWTCLVDGFSK 228



 Score = 67.8 bits (164), Expect = 2e-09
 Identities = 47/150 (31%), Positives = 73/150 (48%)
 Frame = -3

Query: 506 DVNYTLSLFNQLPILSSSFIYNSLIRALTLVNQPQQAFLLFYSMLHENTDTLLFNKFTFP 327
           DV     LF+++P       +NS+I       +  +A  LF +ML E    L+ N  TF 
Sbjct: 262 DVEMARRLFDEMPT-RDVITWNSMIAGYEFNGKFMEALYLFIAMLKEG---LVPNHTTFV 317

Query: 326 SLLKSCAQLYGTGEGQQVHGFVLKSGFDFDLYVRNSLIYMYAKCGEIESACKVFDEIPVK 147
             L + + L    +G+ +H  ++K G + +  +  SLI MY+KCG +ESA  VF  I   
Sbjct: 318 GALSAVSGLAVLSKGKWIHSLMVKCGIESEGVLGTSLIEMYSKCGSVESALSVFRAI--S 375

Query: 146 DKNVVTWNTMINALVKSGDIDSASKLFDEM 57
            K +  W  +I  L   G  + A ++F EM
Sbjct: 376 KKKLGHWTAIIVGLGMHGMAERALEMFSEM 405