BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00009170
         (2690 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobr...   407   e-110
ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citr...   399   e-108
ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268...   398   e-108
ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation spec...   393   e-106
ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobr...   389   e-105
ref|XP_007044908.1| RNA-binding family protein isoform 5, partia...   389   e-105
ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobr...   389   e-105
ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobr...   389   e-105
ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation spec...   386   e-104
ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citr...   386   e-104
ref|XP_002515040.1| RNA binding protein, putative [Ricinus commu...   376   e-101
ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prun...   372   e-100
ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation spec...   370   1e-99
ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309...   370   2e-99
gb|EXB82464.1| Cleavage and polyadenylation specificity factor s...   368   9e-99
ref|XP_002312652.1| RNA recognition motif-containing family prot...   359   3e-96
ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [A...   321   1e-84
gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus...   318   6e-84
ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Popu...   318   8e-84
ref|XP_002315647.1| RNA recognition motif-containing family prot...   318   8e-84

>ref|XP_007044902.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695488|ref|XP_007044903.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708837|gb|EOY00734.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708838|gb|EOY00735.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
          Length = 653

 Score =  407 bits (1046), Expect = e-110
 Identities = 237/492 (48%), Positives = 292/492 (59%), Gaps = 8/492 (1%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MD +AEEQ+D+GDEEYG +QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGAQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 365  MHQSETQVPSGGVGNGG--HPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQ 529
            + +SE     GG+G+ G    K E   PR  E+G SQG+N+    + G+   N  + + +
Sbjct: 61   LQRSEAPPQPGGMGSTGLQAQKNEAPEPR-GEAGGSQGLNIPGVSVQGK-HLNVTARYPE 118

Query: 530  QNTGGFNSNKGLEEGTGDYSNGSA--PKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPN 703
            Q+  G  +    E G+G Y +G++   KGR  E     QV NMGFQG ++A  K G DP+
Sbjct: 119  QD--GQPAVSRPEMGSGSYPSGTSISQKGRVMEGTQDTQVKNMGFQGLSSASHKVGIDPS 176

Query: 704  QMPAKFSGATPLLPDPGTDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 883
             +P K +       + GT   + A  +  N++  NVN P++S+N +RP ++NG TM+FVG
Sbjct: 177  GVPQKIANVPAQSLNSGTGGPQGAPHVPPNQMGLNVNHPMISENQVRPPIENGPTMLFVG 236

Query: 884  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFL 1063
            +LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEFY+  +AAACKEGM G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDPASAAACKEGMDGYM 296

Query: 1064 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGD 1243
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR PND G GRG   N+ +G   
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PND-GLGRGGNMNYQSG--- 351

Query: 1244 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1423
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGVVNRSGVGGPMRGRGGVGVKNMVGSSAGVGNGANGGAAYGQG 410

Query: 1424 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 1603
                            Q MMGAGFDPT                              L G
Sbjct: 411  PAGPPFGGPAGGMMHPQGMMGAGFDPTYMGRGGSYGGFPGPGFPGMLPSFPAVNTLGLAG 470

Query: 1604 VAPHVNPAFFGR 1639
            VAPHVNPAFFGR
Sbjct: 471  VAPHVNPAFFGR 482



 Score = 60.1 bits (144), Expect = 5e-06
 Identities = 30/56 (53%), Positives = 35/56 (62%)
 Frame = +2

Query: 1976 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            +R+H               GQSSSRSR ++H M E+  RSRSRD DYGKRRRLPSE
Sbjct: 598  YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 653


>ref|XP_006438179.1| hypothetical protein CICLE_v10030915mg [Citrus clementina]
            gi|557540375|gb|ESR51419.1| hypothetical protein
            CICLE_v10030915mg [Citrus clementina]
          Length = 658

 Score =  399 bits (1024), Expect = e-108
 Identities = 241/497 (48%), Positives = 290/497 (58%), Gaps = 13/497 (2%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MD +AEEQ+DY +EEYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 365  MHQSETQVPSGGVGNGG-HPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQQ 532
              Q E   PS GVGNG    K      +  ++G SQG N+    ++G+  TNAG+ F  Q
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGK-YTNAGTHFPAQ 119

Query: 533  NTGGFNSNKGLEEGTGDYSNGSAPKGRGT--EIVAAPQVGNMGFQGSATAPPKFGADPNQ 706
            N      N+    G+G+Y +G++   +G+  E      V NMGFQGS + PP+ G DP+ 
Sbjct: 120  NDVQVAVNRP-NMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPPRTGVDPSN 178

Query: 707  MPAKFSGATPLLPDPGT----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMI 874
            MP + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+
Sbjct: 179  MPGRVANEPAPVLNPGAAGPQGALIPANQMGVNI---NVNRAMVNENQIRPPLENGGTML 235

Query: 875  FVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMH 1054
            FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEF+++ AAAACK+GM+
Sbjct: 236  FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMN 295

Query: 1055 GFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAG 1234
            G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QGRR  NDGG GRG   N+ +G
Sbjct: 296  GHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGG-GRGGNMNYQSG 354

Query: 1235 AGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXN 1408
                GGRNF +                             KNMM                
Sbjct: 355  ---DGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGAKNMMGSSSGAGSGAGPAAGG 410

Query: 1409 PYAQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1588
             Y Q                 QNMMG GFDPT                            
Sbjct: 411  GYGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNA 469

Query: 1589 XXLPGVAPHVNPAFFGR 1639
              L GVAPHVNPAFF R
Sbjct: 470  MGLAGVAPHVNPAFFNR 486


>ref|XP_002282072.2| PREDICTED: uncharacterized protein LOC100268141 isoform 1 [Vitis
            vinifera] gi|359473133|ref|XP_003631251.1| PREDICTED:
            uncharacterized protein LOC100268141 isoform 2 [Vitis
            vinifera]
          Length = 647

 Score =  398 bits (1022), Expect = e-108
 Identities = 241/511 (47%), Positives = 293/511 (57%), Gaps = 11/511 (2%)
 Frame = +2

Query: 197  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQ 373
            +AEEQLDY DEEYG +QKM +QGGGAISAL D+ELMGEDDEYDDLYNDVNVGEGF+QMH+
Sbjct: 1    MAEEQLDYEDEEYGGAQKMPFQGGGAISALADDELMGEDDEYDDLYNDVNVGEGFLQMHR 60

Query: 374  SETQVPSGGVGNGGHP--KTEGAGPRVSESGPSQGV---NLKLDGRGSTNAGSSFLQQNT 538
            SE   PSG +  G     KT+   P+  E+G SQG+    + ++G+ S    +    +  
Sbjct: 61   SEAPAPSGVMAGGPFQAHKTD-VPPQKLEAGTSQGLIIPGVSIEGKYS----NPHFHEKK 115

Query: 539  GGFNSNKGLEEGTGDYSNGSA--PKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMP 712
             G  + KG E G+  + +G +   KGR  E+    QV N+GFQGS   P K GA+P+ + 
Sbjct: 116  EGPMAVKGPEMGSTSHLDGPSVSQKGRVLEMTHDTQVRNLGFQGSTPIPQKTGAEPSDVH 175

Query: 713  AKFSGATPLLPDPGTDALRNAQQMQVNRVPGNVN--RPIVSDNPIRPAVDNGTTMIFVGD 886
             K +  +  + + GT   R   QM  N++  NVN  RP+V++N IRPAVDNG TM+FVG+
Sbjct: 176  GKIANESTPVLNSGTGGPRAVPQMLSNQMGMNVNVNRPMVNENQIRPAVDNGATMLFVGE 235

Query: 887  LHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLF 1066
            LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEFY++ AAAACKEGM+G++F
Sbjct: 236  LHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFYDASAAAACKEGMNGYIF 295

Query: 1067 NGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDT 1246
            NGRACVVAFASPQ+LKQMGA+Y+NK   QAQ+Q QGRR  ND G GRG G N   G    
Sbjct: 296  NGRACVVAFASPQTLKQMGASYMNK--TQAQSQSQGRRPMND-GVGRGGGMNMQGG---D 349

Query: 1247 GGRNFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1423
             GRN+ +                              KNM+               Y Q 
Sbjct: 350  AGRNYGRGGWGRGGQGILNRGPGGGGPMRGRGGAVGAKNMV---GNTAGVGASGGGYGQG 406

Query: 1424 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 1603
                            Q MMG+GFDPT                              L G
Sbjct: 407  LAGPTFGGPAGGLMHPQGMMGSGFDPTYMGRGGAYGGFSGSAFPGMVPSFPAVNTMGLAG 466

Query: 1604 VAPHVNPAFFGRXXXXXXXXXXXXXXXEAHH 1696
            VAPHVNPAFFGR               + HH
Sbjct: 467  VAPHVNPAFFGRGMAANGMGMMGATGMDGHH 497



 Score = 68.9 bits (167), Expect = 1e-08
 Identities = 33/57 (57%), Positives = 39/57 (68%)
 Frame = +2

Query: 1973 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            G+RDH               GQSSSRSRS++  + ++DHRSRSRDGDYGKRRRLPSE
Sbjct: 591  GYRDHRQRERDFNNEDDWDRGQSSSRSRSRSRAVADEDHRSRSRDGDYGKRRRLPSE 647


>ref|XP_006483997.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 658

 Score =  393 bits (1009), Expect = e-106
 Identities = 238/497 (47%), Positives = 289/497 (58%), Gaps = 13/497 (2%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MD +AEEQ+DY +EEYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYNDVNVG+G +Q
Sbjct: 1    MDSMAEEQIDYEEEEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQ 60

Query: 365  MHQSETQVPSGGVGNGG-HPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQQ 532
              Q E   PS GVGNG    K      +  ++G SQG N+    ++G+  TNAG+ F  Q
Sbjct: 61   FQQPEAPPPSAGVGNGRLQVKKTDVPEQQVQAGVSQGSNVPGVSVEGK-YTNAGTHFPAQ 119

Query: 533  NTGGFNSNKGLEEGTGDYSNGSAPKGRGT--EIVAAPQVGNMGFQGSATAPPKFGADPNQ 706
            N      N+    G+G+Y +G++   +G+  E      V NMGFQGS + P + G DP+ 
Sbjct: 120  NDVQVAVNRP-NMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSN 178

Query: 707  MPAKFSGATPLLPDPGT----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMI 874
            MP + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+
Sbjct: 179  MPGRVANEPAPVLNPGAAGPQGALIPANQMGVNI---NVNRAMVNENQIRPPLENGGTML 235

Query: 875  FVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMH 1054
            FVG+LHWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEF+++ AAAACK+GM+
Sbjct: 236  FVGELHWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMN 295

Query: 1055 GFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAG 1234
            G +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QGRR  NDGG GRG   N+ +G
Sbjct: 296  GHVFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQTQGRRPMNDGG-GRGGNMNYQSG 354

Query: 1235 AGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXN 1408
                GGRNF +                             +NM+                
Sbjct: 355  ---DGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGG 410

Query: 1409 PYAQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1588
             Y Q                 QNMMG GFDPT                            
Sbjct: 411  GYGQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNA 469

Query: 1589 XXLPGVAPHVNPAFFGR 1639
              L GVAPHVNPAFF R
Sbjct: 470  MGLAGVAPHVNPAFFNR 486


>ref|XP_007044909.1| RNA-binding family protein isoform 6 [Theobroma cacao]
            gi|508708844|gb|EOY00741.1| RNA-binding family protein
            isoform 6 [Theobroma cacao]
          Length = 602

 Score =  389 bits (999), Expect = e-105
 Identities = 227/492 (46%), Positives = 286/492 (58%), Gaps = 8/492 (1%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 365  MHQSETQVPSGGVGNGG--HPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQ 529
            + +SE  +  GG+G+ G    + E   PRV E+G SQG+N+    + G+    +     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 530  QNTGGFNSNKGLEEGTGDYSNGSA--PKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPN 703
            +     N     E  +G Y +GS+   KG  TE     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVNRP---EMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 704  QMPAKFSGATPLLPDPGTDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 883
             +P K +       + GT   +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 884  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFL 1063
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+  +AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1064 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGD 1243
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR PN+ G GRG   N+ +G   
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE-GLGRGGNLNYQSG--- 351

Query: 1244 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1423
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1424 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 1603
                            Q MMGAGFDPT                              L G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1604 VAPHVNPAFFGR 1639
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481


>ref|XP_007044908.1| RNA-binding family protein isoform 5, partial [Theobroma cacao]
            gi|508708843|gb|EOY00740.1| RNA-binding family protein
            isoform 5, partial [Theobroma cacao]
          Length = 656

 Score =  389 bits (999), Expect = e-105
 Identities = 227/492 (46%), Positives = 286/492 (58%), Gaps = 8/492 (1%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 365  MHQSETQVPSGGVGNGG--HPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQ 529
            + +SE  +  GG+G+ G    + E   PRV E+G SQG+N+    + G+    +     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 530  QNTGGFNSNKGLEEGTGDYSNGSA--PKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPN 703
            +     N     E  +G Y +GS+   KG  TE     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVNRP---EMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 704  QMPAKFSGATPLLPDPGTDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 883
             +P K +       + GT   +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 884  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFL 1063
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+  +AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1064 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGD 1243
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR PN+ G GRG   N+ +G   
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE-GLGRGGNLNYQSG--- 351

Query: 1244 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1423
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1424 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 1603
                            Q MMGAGFDPT                              L G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1604 VAPHVNPAFFGR 1639
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481


>ref|XP_007044907.1| RNA-binding family protein isoform 4 [Theobroma cacao]
            gi|508708842|gb|EOY00739.1| RNA-binding family protein
            isoform 4 [Theobroma cacao]
          Length = 697

 Score =  389 bits (999), Expect = e-105
 Identities = 227/492 (46%), Positives = 286/492 (58%), Gaps = 8/492 (1%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 365  MHQSETQVPSGGVGNGG--HPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQ 529
            + +SE  +  GG+G+ G    + E   PRV E+G SQG+N+    + G+    +     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 530  QNTGGFNSNKGLEEGTGDYSNGSA--PKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPN 703
            +     N     E  +G Y +GS+   KG  TE     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVNRP---EMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 704  QMPAKFSGATPLLPDPGTDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 883
             +P K +       + GT   +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 884  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFL 1063
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+  +AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1064 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGD 1243
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR PN+ G GRG   N+ +G   
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE-GLGRGGNLNYQSG--- 351

Query: 1244 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1423
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1424 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 1603
                            Q MMGAGFDPT                              L G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1604 VAPHVNPAFFGR 1639
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481



 Score = 60.1 bits (144), Expect = 5e-06
 Identities = 30/56 (53%), Positives = 35/56 (62%)
 Frame = +2

Query: 1976 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            +R+H               GQSSSRSR ++H M E+  RSRSRD DYGKRRRLPSE
Sbjct: 642  YREHRHRERDLDYDDDLDRGQSSSRSRRRSHAMPEEQRRSRSRDVDYGKRRRLPSE 697


>ref|XP_007044904.1| RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|590695496|ref|XP_007044905.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|590695500|ref|XP_007044906.1| RNA-binding family
            protein isoform 1 [Theobroma cacao]
            gi|508708839|gb|EOY00736.1| RNA-binding family protein
            isoform 1 [Theobroma cacao] gi|508708840|gb|EOY00737.1|
            RNA-binding family protein isoform 1 [Theobroma cacao]
            gi|508708841|gb|EOY00738.1| RNA-binding family protein
            isoform 1 [Theobroma cacao]
          Length = 652

 Score =  389 bits (999), Expect = e-105
 Identities = 227/492 (46%), Positives = 286/492 (58%), Gaps = 8/492 (1%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MD +AEEQ+D+GDEEYG  QKMQYQG GAI AL DEE+MGEDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDAMAEEQIDFGDEEYGGGQKMQYQGSGAIPALADEEMMGEDDEYDDLYNDVNVGEGFLQ 60

Query: 365  MHQSETQVPSGGVGNGG--HPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQ 529
            + +SE  +  GG+G+ G    + E   PRV E+G SQG+N+    + G+    +     +
Sbjct: 61   LQRSEAPLQPGGLGSTGLKAQRNEAPEPRV-EAGGSQGLNIPGVSVQGKHPNVSARYPEK 119

Query: 530  QNTGGFNSNKGLEEGTGDYSNGSA--PKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPN 703
            +     N     E  +G Y +GS+   KG  TE     QV N+GFQG  +A  K G DP+
Sbjct: 120  EEQPAVNRP---EMVSGSYPSGSSISQKGSVTEGTHDKQVKNLGFQGLTSASNKVGIDPS 176

Query: 704  QMPAKFSGATPLLPDPGTDALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVG 883
             +P K +       + GT   +    +  N++  NVN P++++N ++P ++NG TM+FVG
Sbjct: 177  GVPQKIANDPAQSLNSGTGGPQGPPHVPPNQMGTNVNHPVMNENQVQPPIENGPTMLFVG 236

Query: 884  DLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFL 1063
            +LHWWTTDAELE VLSQYGR+KEIKFFDE+ASGKSKGYCQVEFY+  +AA CKEGM+G++
Sbjct: 237  ELHWWTTDAELESVLSQYGRLKEIKFFDEKASGKSKGYCQVEFYDPSSAAVCKEGMNGYM 296

Query: 1064 FNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGD 1243
            FNGRACVVAFASPQ+LKQMGA+Y+NK Q Q+QAQPQGRR PN+ G GRG   N+ +G   
Sbjct: 297  FNGRACVVAFASPQTLKQMGASYMNKNQGQSQAQPQGRR-PNE-GLGRGGNLNYQSG--- 351

Query: 1244 TGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQX 1423
              GRN+ +                             KNM+               Y Q 
Sbjct: 352  DAGRNYGR-GGWGRGGQGGVNRAGGGGLMRGRGGVGVKNMVGISAGVGNGANGAGAYGQ- 409

Query: 1424 XXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPG 1603
                            Q MMGAGFDPT                              L G
Sbjct: 410  GPGPAFGGPAGGMMHPQGMMGAGFDPTYMVRGGGYGGFPGPGFPGMLPSFPAVNTMGLAG 469

Query: 1604 VAPHVNPAFFGR 1639
            VAPHVNPAFFGR
Sbjct: 470  VAPHVNPAFFGR 481



 Score = 62.8 bits (151), Expect = 8e-07
 Identities = 30/56 (53%), Positives = 37/56 (66%)
 Frame = +2

Query: 1976 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            +R+H               GQSSSRSR ++H M E++HRSRSRD DYGK+RRLPSE
Sbjct: 597  YREHRHRERDLDYDDDWDRGQSSSRSRRRSHAMPEEEHRSRSRDVDYGKKRRLPSE 652


>ref|XP_006483998.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Citrus sinensis]
          Length = 655

 Score =  386 bits (992), Expect = e-104
 Identities = 237/495 (47%), Positives = 286/495 (57%), Gaps = 14/495 (2%)
 Frame = +2

Query: 197  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQ 373
            +AEEQ+DY ++EYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYNDVNVG+G +Q  Q
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDVNVGDGLLQFQQ 60

Query: 374  SETQVPSGGVGNGGHP--KTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQQNT 538
             E   PS GVGNG     KT+    RV   G SQG N+    ++G+  TNAGS F  QN 
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGK-YTNAGSHFPAQND 118

Query: 539  GGFNSNKGLEEGTGDYSNGSAPKGRGT--EIVAAPQVGNMGFQGSATAPPKFGADPNQMP 712
                 N+    G+G+Y +G++   +G+  E      V NMGFQGS + P + G DP+ MP
Sbjct: 119  VQVAVNRP-NMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 177

Query: 713  AKFSGATPLLPDPGT----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFV 880
             + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+FV
Sbjct: 178  GRVANEPAPVLNPGAAGPQGALIPANQMGVN---ANVNRVMVNENQIRPPLENGGTMLFV 234

Query: 881  GDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGF 1060
            G+LHWWTTDAELE VLSQYGR KEIKFFDERASGKSKGYCQVEF+++ AAAACK+GM+G 
Sbjct: 235  GELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 294

Query: 1061 LFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAG 1240
            +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QG R  NDGG GRG   N+ +G  
Sbjct: 295  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGG-GRGGNTNYQSG-- 351

Query: 1241 DTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXNPY 1414
              GGRNF +                             +NM+                 Y
Sbjct: 352  -DGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGVGHAAGGGY 409

Query: 1415 AQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1594
             Q                 QNMMG GFDPT                              
Sbjct: 410  GQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMG 468

Query: 1595 LPGVAPHVNPAFFGR 1639
            L GVAPHVNPAFF R
Sbjct: 469  LAGVAPHVNPAFFNR 483



 Score = 60.1 bits (144), Expect = 5e-06
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +2

Query: 2033 GQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            GQSSSRSRS++  + ++DHRSRSRD DYGKRRRLPSE
Sbjct: 619  GQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_006438180.1| hypothetical protein CICLE_v10030917mg [Citrus clementina]
            gi|567891321|ref|XP_006438181.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540376|gb|ESR51420.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
            gi|557540377|gb|ESR51421.1| hypothetical protein
            CICLE_v10030917mg [Citrus clementina]
          Length = 655

 Score =  386 bits (991), Expect = e-104
 Identities = 236/495 (47%), Positives = 286/495 (57%), Gaps = 14/495 (2%)
 Frame = +2

Query: 197  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQ 373
            +AEEQ+DY ++EYG +QKMQYQGGGAI AL DEELMGEDDEYDDLYND+NVG+G +Q  Q
Sbjct: 1    MAEEQIDYEEDEYGGAQKMQYQGGGAIPALADEELMGEDDEYDDLYNDINVGDGLLQFQQ 60

Query: 374  SETQVPSGGVGNGGHP--KTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQQNT 538
             E   PS GVGNG     KT+    RV   G SQG N+    ++G+  TNAGS F  QN 
Sbjct: 61   PEAPPPSAGVGNGRLQVKKTDVPEQRVQVGG-SQGSNIPGVSVEGK-YTNAGSDFPAQND 118

Query: 539  GGFNSNKGLEEGTGDYSNGSAPKGRGT--EIVAAPQVGNMGFQGSATAPPKFGADPNQMP 712
                 N+    G+G+Y +G++   +G+  E      V NMGFQGS + P + G DP+ MP
Sbjct: 119  VQVAVNRP-NMGSGNYPDGASVSQKGSVQETTHDAHVRNMGFQGSTSGPSRTGVDPSNMP 177

Query: 713  AKFSGATPLLPDPGT----DALRNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFV 880
             + +     + +PG      AL  A QM VN    NVNR +V++N IRP ++NG TM+FV
Sbjct: 178  GRAANEPAPVLNPGAAGPQGALIPANQMGVN---ANVNRVMVNENQIRPPLENGGTMLFV 234

Query: 881  GDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGF 1060
            G+LHWWTTDAELE VLSQYGR KEIKFFDERASGKSKGYCQVEF+++ AAAACK+GM+G 
Sbjct: 235  GELHWWTTDAELESVLSQYGRAKEIKFFDERASGKSKGYCQVEFFDAAAAAACKDGMNGH 294

Query: 1061 LFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAG 1240
            +FNGR CVVAFASPQ+LKQMGA+Y+NK Q Q Q+Q QG R  NDGG GRG   N+ +G  
Sbjct: 295  VFNGRPCVVAFASPQTLKQMGASYMNKNQGQPQSQNQGSRPMNDGG-GRGGNTNYQSG-- 351

Query: 1241 DTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMM--XXXXXXXXXXXXXNPY 1414
              GGRNF +                             +NM+                 Y
Sbjct: 352  -DGGRNFGR-GGWGRGGQGVPNRGPGGGAMRGRGPMGARNMIGSSSGAGSGAGHAAGGGY 409

Query: 1415 AQXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX 1594
             Q                 QNMMG GFDPT                              
Sbjct: 410  GQGLAGPGFGGPAGGMMHPQNMMG-GFDPTYMGRGGGYGGFSGPGFPGMLPSFPAVNAMG 468

Query: 1595 LPGVAPHVNPAFFGR 1639
            L GVAPHVNPAFF R
Sbjct: 469  LAGVAPHVNPAFFNR 483



 Score = 60.1 bits (144), Expect = 5e-06
 Identities = 28/37 (75%), Positives = 33/37 (89%)
 Frame = +2

Query: 2033 GQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            GQSSSRSRS++  + ++DHRSRSRD DYGKRRRLPSE
Sbjct: 619  GQSSSRSRSRSGAIPDEDHRSRSRDVDYGKRRRLPSE 655


>ref|XP_002515040.1| RNA binding protein, putative [Ricinus communis]
            gi|223546091|gb|EEF47594.1| RNA binding protein, putative
            [Ricinus communis]
          Length = 644

 Score =  376 bits (965), Expect = e-101
 Identities = 229/490 (46%), Positives = 275/490 (56%), Gaps = 9/490 (1%)
 Frame = +2

Query: 197  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQ 373
            +A+EQ+DY DEEYG +QK+QYQG GAI AL +EE MGEDDEYDDLYNDVN+GE F+QMH+
Sbjct: 1    MADEQIDYEDEEYGGAQKLQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNIGENFLQMHR 59

Query: 374  SETQVPSGGVGNGGHPKTEGAGPRVSESGPSQGVNLK---LDGRGSTNAGSSFLQQNTGG 544
            SE       VGNGG         RV ESG SQG+N+    ++ + ST  G+ F +QN   
Sbjct: 60   SEAPPAPPSVGNGGFQPRNSNDLRV-ESGGSQGLNIPGVAVESKYST--GTHFPEQNV-- 114

Query: 545  FNSNKGLEEGTGDYSNGS--APKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMPAK 718
                KG E G+  Y +GS  A K R  E+    Q  NMGFQGS + P   G DP+ M  K
Sbjct: 115  ----KGPEIGSVGYPDGSSIAQKTRVMEMTNDSQARNMGFQGSTSGPSNIGVDPSDMNNK 170

Query: 719  FSGATPLLPDPGTDAL---RNAQQMQVNRVPGNVNRPIVSDNPIRPAVDNGTTMIFVGDL 889
             S     +P+ G   +     A QM +N    + NR   ++N IRP ++NG+TM++VG+L
Sbjct: 171  ISNDPTPVPNAGVPRVIPQLPASQMNMNM---DTNRSATNENQIRPPLENGSTMLYVGEL 227

Query: 890  HWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLFN 1069
            HWWTTDAELE VLSQYG VKEIKFFDERASGKSKGYCQVEFY++ AAAACKEGM+G LFN
Sbjct: 228  HWWTTDAELENVLSQYGMVKEIKFFDERASGKSKGYCQVEFYDAAAAAACKEGMNGHLFN 287

Query: 1070 GRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDTG 1249
            GRACVVAFAS Q+LKQMGA+Y+NK Q Q Q+Q QGRR  ND G+GRG   N+  G     
Sbjct: 288  GRACVVAFASQQTLKQMGASYMNKNQGQPQSQNQGRRPMND-GAGRGGNMNYQGG---DA 343

Query: 1250 GRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXX 1429
            GRNF +                                +               Y Q   
Sbjct: 344  GRNFGRGGWGRGGQGILNRGPGGGGRMGGRGGSMGAKNIVGGAGGVGSGANGGGYGQGLA 403

Query: 1430 XXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGVA 1609
                          Q+MM AGFDPT                              L GVA
Sbjct: 404  GPAFGGPAGAMLPPQSMMRAGFDPTYMGRGAGYGGFAGPGFPGMLPSFPAVNAMGLAGVA 463

Query: 1610 PHVNPAFFGR 1639
            PHVNPAFFGR
Sbjct: 464  PHVNPAFFGR 473



 Score = 63.2 bits (152), Expect = 6e-07
 Identities = 31/56 (55%), Positives = 37/56 (66%)
 Frame = +2

Query: 1976 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            +RDH               GQSSSRSRS++  + E+D+RSRSRD DYGKRRRLPSE
Sbjct: 589  YRDHRQRERDSGYEDDWDRGQSSSRSRSRSRAVPEEDYRSRSRDADYGKRRRLPSE 644


>ref|XP_007225677.1| hypothetical protein PRUPE_ppa002814mg [Prunus persica]
            gi|462422613|gb|EMJ26876.1| hypothetical protein
            PRUPE_ppa002814mg [Prunus persica]
          Length = 630

 Score =  372 bits (954), Expect = e-100
 Identities = 232/507 (45%), Positives = 276/507 (54%), Gaps = 7/507 (1%)
 Frame = +2

Query: 197  LAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQ 373
            +AEEQ+DY DEEYG +QK+QYQG GAISAL DEE M EDDEYDDLYNDVNV EGF+QMH+
Sbjct: 1    MAEEQIDYEDEEYGGAQKLQYQGSGAISALADEEPMVEDDEYDDLYNDVNVREGFLQMHR 60

Query: 374  SETQVPSGGVGNGG--HPKTEGAGPRVSESGPSQGVNLKLDGRGSTNAGSSFLQQNTGGF 547
            SE  +P GGVGNGG    KT+    RV ++G SQ    K+ G       SS + Q     
Sbjct: 61   SEAPLPPGGVGNGGLQAQKTDVTETRV-QAGVSQ--ESKIPGVSVQGKYSSAVAQ----- 112

Query: 548  NSNKGLEEGTGDYSNGSAPKGRGTEIVA-APQVGNMGFQGSATAPPKFGADPNQMPAKFS 724
                              P+ +G   VA  P++G+ G+ GS T PP  G D + +  K +
Sbjct: 113  -----------------FPEQQGQPPVAKEPELGSTGY-GSTTMPPNVGGDSSDITGKTA 154

Query: 725  GATPLLPDPGTDALRNAQQMQVNR--VPGNVNRPIVSDNPIRPAVDNGTTMIFVGDLHWW 898
              +    + GT       QM  N+  +  N NRP+ ++N IRP V+NG+TM+FVG+LHWW
Sbjct: 155  LESVPSMNSGTAGPTGVTQMPTNQISIKVNANRPMFNENQIRPPVENGSTMLFVGELHWW 214

Query: 899  TTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLFNGRA 1078
            TTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVEF++  AA ACKEGM G+LFNGRA
Sbjct: 215  TTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEFHDPAAATACKEGMDGYLFNGRA 274

Query: 1079 CVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDTGGRN 1258
            CVVAFASPQ+LKQMGA+YL+K+Q Q Q+Q  GRR P + G GRG G N+    GDTGGRN
Sbjct: 275  CVVAFASPQTLKQMGASYLSKSQGQTQSQQPGRR-PMNEGVGRGGGVNYQ--TGDTGGRN 331

Query: 1259 FNK-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXX 1435
            F +                              KNM                Y Q     
Sbjct: 332  FGRGGWGRGGQGVANRGPGGGGPMRGRGGAMGAKNM--AGNPAGVGTGANGGYGQGLAGP 389

Query: 1436 XXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGVAPH 1615
                        Q MMGAGFDPT                              L GVAPH
Sbjct: 390  GFGGPVGGMMNPQGMMGAGFDPTYMGRGGGYGGFPGPAFPGMLSSFPAVNTMGLAGVAPH 449

Query: 1616 VNPAFFGRXXXXXXXXXXXXXXXEAHH 1696
            VNPAFFGR               + HH
Sbjct: 450  VNPAFFGRGMATNGMGMMGSSGMDGHH 476



 Score = 65.1 bits (157), Expect = 2e-07
 Identities = 33/56 (58%), Positives = 36/56 (64%)
 Frame = +2

Query: 1976 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            +RDH               GQSSSR RS++  M EDDHRSRSRD DYGKRRRLPSE
Sbjct: 575  YRDHRQRERDVGYEDDWDRGQSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 630


>ref|XP_006341786.1| PREDICTED: cleavage and polyadenylation specificity factor subunit
            CG7185-like isoform X1 [Solanum tuberosum]
            gi|565349616|ref|XP_006341787.1| PREDICTED: cleavage and
            polyadenylation specificity factor subunit CG7185-like
            isoform X2 [Solanum tuberosum]
          Length = 648

 Score =  370 bits (951), Expect = 1e-99
 Identities = 224/493 (45%), Positives = 273/493 (55%), Gaps = 9/493 (1%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MDP A+EQLDYGDEEYG S KMQY G G I AL ++E+MGEDDEYDDLYNDVN+GEGF+Q
Sbjct: 1    MDPTADEQLDYGDEEYGGSHKMQYHGSGTIPALAEDEMMGEDDEYDDLYNDVNIGEGFLQ 60

Query: 365  MHQSETQVPSGGVGNGGHPKTEGAGPRVSESGPSQGVNLKLDGRGSTNAGSSFLQQNTGG 544
            + +SE  VPS   GNG     + + P  S +G       K+ G  +    +    Q    
Sbjct: 61   LQRSEVPVPSVDAGNGNFQAQKDSFP-ASRAGGLGSEEAKIPGIATEGKYAGTEVQ---- 115

Query: 545  FNSNKG--LEEGTGDYSNGSAPKGRGTEIVAA--PQVGNMGFQGSATAPPKFGADPNQMP 712
            F   KG  + E   +    +A K R + I      Q GN G+QGS   P K GADP  MP
Sbjct: 116  FPQQKGEPVVERETERPADAAQKARPSAITMTLNSQAGNSGYQGSMPMPQKIGADPMAMP 175

Query: 713  AK-FSGATPLLPD--PGTDALRNAQQMQVNRVPG-NVNRPIVSDNPIRPAVDNGTTMIFV 880
             K  S ATPL+    PG   + +    Q+N     N+N P++S+ P RP+++NG TM+FV
Sbjct: 176  EKNASEATPLMNSVVPGPRVVPHMPTNQLNSSGNVNMNNPVISETPFRPSLENGNTMLFV 235

Query: 881  GDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGF 1060
            G+LHWWTTDAELE VL+QYG VKEIKFFDERASGKSKGYCQVEF++  +AAACKEGM+G+
Sbjct: 236  GELHWWTTDAELESVLTQYGNVKEIKFFDERASGKSKGYCQVEFFDPASAAACKEGMNGY 295

Query: 1061 LFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAG 1240
             FNGRACVVAFA+PQ++KQMG++Y NK Q Q Q+QPQGRR P + G GRG G N+  G  
Sbjct: 296  NFNGRACVVAFATPQTIKQMGSSYANKTQNQVQSQPQGRR-PMNEGVGRG-GPNYTPG-- 351

Query: 1241 DTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQ 1420
               GRNF +                             KNMM               + Q
Sbjct: 352  -DAGRNFGR-GSWGRGGPGMPNRGPGGGPVRGRGAMGSKNMM---VNPGAGNGAGGAFGQ 406

Query: 1421 XXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLP 1600
                             Q MMG GFDP+                              LP
Sbjct: 407  GLAGPAFGGPPAGLMHPQGMMGPGFDPSFMGRGAGYGGFSGPAFPGMMPPFQAVNPMGLP 466

Query: 1601 GVAPHVNPAFFGR 1639
            GVAPHVNPAFFGR
Sbjct: 467  GVAPHVNPAFFGR 479



 Score = 63.5 bits (153), Expect = 5e-07
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = +2

Query: 1973 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            G+RD+               GQSSSRSRSK+   QE+DHRSRSRD +YGKRRR PSE
Sbjct: 592  GYRDYRQKERESEYEEDYDRGQSSSRSRSKSRAAQEEDHRSRSRDTNYGKRRRAPSE 648


>ref|XP_004310003.1| PREDICTED: uncharacterized protein LOC101309507 [Fragaria vesca
            subsp. vesca]
          Length = 646

 Score =  370 bits (950), Expect = 2e-99
 Identities = 225/507 (44%), Positives = 269/507 (53%), Gaps = 4/507 (0%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MDP+ EEQ+DY +EEYG +QK+QYQ  GAI AL DEE M EDDEYDDLYNDVNVGEGF+Q
Sbjct: 1    MDPMGEEQIDYEEEEYGGAQKLQYQESGAIPALADEEPMVEDDEYDDLYNDVNVGEGFLQ 60

Query: 365  MHQSETQVPSGGVGNGGHPKTEGAGPRVS-ESGPSQGVNLKLDGRGSTNAGSSFLQQNTG 541
            MH+ E  +P  GVGNGG    +   P    + G SQ V  K  G       SS  +Q   
Sbjct: 61   MHRPEPPLPPAGVGNGGLQAQKNNVPEQRVQGGASQEV--KNPGFSVEGKYSSVPEQKD- 117

Query: 542  GFNSNKGLEEGTGDYSNGSAPKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMPAKF 721
                    +         ++ KGR  E+    QV NMGFQG+AT      AD + +  K 
Sbjct: 118  --------QPPVSVVPEMASQKGRVMEMTHDAQVRNMGFQGAATMQSNVVADSSDLTGKI 169

Query: 722  SGATPLLPDPGTDALRNAQQMQVNRVPG--NVNRPIVSDNPIRPAVDNGTTMIFVGDLHW 895
            +       + G++     QQM  N++    NVNRP+V++N IRP V+NG+  +FVG+LHW
Sbjct: 170  ANGPIPSMNSGSNGPPAVQQMPANQMNMKINVNRPMVNENQIRPPVENGSATLFVGELHW 229

Query: 896  WTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLFNGR 1075
            WTTDAELEGVLSQ+GR+KEIKFFDERASGKSKGYCQV+FY+  AA+ACKEGM G++FNGR
Sbjct: 230  WTTDAELEGVLSQFGRIKEIKFFDERASGKSKGYCQVDFYDPAAASACKEGMDGYVFNGR 289

Query: 1076 ACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDTGGR 1255
            ACVVAFAS Q+LKQMG +Y+NK+Q Q Q QPQGRR  ND G+GRG   NF    GDT GR
Sbjct: 290  ACVVAFASSQTLKQMGDSYVNKSQGQVQTQPQGRRPMND-GAGRGGNMNFQ--GGDT-GR 345

Query: 1256 NFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXX 1435
            NF +                                M               Y Q     
Sbjct: 346  NFGRGNNWGRGGQGVLNRGPGGGGPGRGRGAMGARNMVGNNAGVGTGANGGGYGQGLGGP 405

Query: 1436 XXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGVAPH 1615
                          MMG GFDPT                              L GVAPH
Sbjct: 406  GFGGPVGGMMNAPGMMGPGFDPTYMGRGGGYGGFPGPGFPGMLPQFPGVNAMGLAGVAPH 465

Query: 1616 VNPAFFGRXXXXXXXXXXXXXXXEAHH 1696
            VNPAFFGR               E HH
Sbjct: 466  VNPAFFGRGMATNGMGMMGSSGMEGHH 492



 Score = 63.2 bits (152), Expect = 6e-07
 Identities = 32/56 (57%), Positives = 35/56 (62%)
 Frame = +2

Query: 1976 HRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            +RDH               G SSSR RS++  M EDDHRSRSRD DYGKRRRLPSE
Sbjct: 591  YRDHRRRERDVAYEDDRDRGHSSSRPRSRSKAMPEDDHRSRSRDVDYGKRRRLPSE 646


>gb|EXB82464.1| Cleavage and polyadenylation specificity factor subunit [Morus
            notabilis]
          Length = 636

 Score =  368 bits (944), Expect = 9e-99
 Identities = 232/491 (47%), Positives = 277/491 (56%), Gaps = 10/491 (2%)
 Frame = +2

Query: 197  LAEEQLDYGDEEYG-SQKMQYQG-GGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMH 370
            +AE+ +D+ DEEYG +QK QYQG GGAISAL DEELMG+DDEYDDLYNDVNVGEGF+Q+ 
Sbjct: 1    MAEDHIDFEDEEYGGAQKHQYQGSGGAISALADEELMGDDDEYDDLYNDVNVGEGFLQLQ 60

Query: 371  QSET-QVPSG-GVGNGGHPKTEGAGPRVSESGPSQGVNL---KLDGRGSTNAGSSFLQQN 535
            +SE   +P+  GVGNG   +         E G SQ  N+     +GR S+ AGS F  Q 
Sbjct: 61   RSEAPSLPAAAGVGNGLQAQKRNFPEPREEIGGSQQPNIPGVSAEGRFSS-AGSQFPGQQ 119

Query: 536  TGGFNSNKGLEEGTGDYSNGSAPKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMPA 715
             G    +K  E G+  Y +G++   +G  IVA       GFQGS       G D + +P 
Sbjct: 120  DG-LKVDKKSEAGSMVYPDGASGSQKG-RIVA-------GFQGSKPMLHSVGVDSSDIPG 170

Query: 716  KFSGATPLLPDPGTDALRNAQQMQVNR--VPGNVNRPIVSDNPIRPAVDNGTTMIFVGDL 889
            K        P+ G    R    MQ N+  V  NV+ PIV++N IRP+++NG+TM+FVG+L
Sbjct: 171  KMVNEPIQAPNSGGAGPRGILPMQGNQTTVNANVSHPIVNENQIRPSIENGSTMLFVGEL 230

Query: 890  HWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLFN 1069
            HWWTTDAELE VLSQYGRVKEIKFFDERASGKSKGYCQVE+Y++ AA ACKEGMHG +FN
Sbjct: 231  HWWTTDAELESVLSQYGRVKEIKFFDERASGKSKGYCQVEYYDAAAAVACKEGMHGHVFN 290

Query: 1070 GRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDTG 1249
            GRACVVAFASPQ+LKQMGAAY++K QVQ Q+QPQGRR  ND G GRG   NF +G    G
Sbjct: 291  GRACVVAFASPQTLKQMGAAYMSKNQVQNQSQPQGRRPIND-GVGRGGNPNFQSG---DG 346

Query: 1250 GRNFNK-VXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXX 1426
            GRNF +                              KNM+               Y Q  
Sbjct: 347  GRNFGRGGWGRGGQGAPNRGPGSGGPMRGRGGAMGAKNMV-----GNNAGVGGGGYGQGL 401

Query: 1427 XXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGV 1606
                           Q MMG GFDPT                                 V
Sbjct: 402  AGPPFGGPAGGMMNPQGMMGTGFDPTYMGRGVGYGGFAGPAFPGMLPSFPAVNTMGFAAV 461

Query: 1607 APHVNPAFFGR 1639
            APHVNPAFFGR
Sbjct: 462  APHVNPAFFGR 472



 Score = 62.8 bits (151), Expect = 8e-07
 Identities = 32/57 (56%), Positives = 37/57 (64%)
 Frame = +2

Query: 1973 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            G RD+               GQSSSR RS++ ++QED HRSRSRD DYGKRRRLPSE
Sbjct: 580  GSRDYRPKERELDYEDDWDRGQSSSRLRSRSRVVQEDHHRSRSRDVDYGKRRRLPSE 636


>ref|XP_002312652.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222852472|gb|EEE90019.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 619

 Score =  359 bits (922), Expect = 3e-96
 Identities = 225/484 (46%), Positives = 268/484 (55%), Gaps = 8/484 (1%)
 Frame = +2

Query: 212  LDYGDEEYGSQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQSETQVP 391
            +DY +EE    KMQYQG GAI AL +EE MGEDDEYDDLYNDVNVGE F+QMH SE   P
Sbjct: 1    MDYEEEE----KMQYQGSGAIPALAEEE-MGEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 392  SGGVGNGGHPKTEGAGPRVSESGPSQGVNLKLDGRGS------TNAGSSFLQQNTGGFNS 553
               VGNGG  +T  A     E+G SQ   L + G G       +NA + F +Q      +
Sbjct: 56   PATVGNGGF-QTRNAHESRIETGGSQA--LAITGGGPAVEGIYSNAKAHFPEQKQVAV-A 111

Query: 554  NKGLEEGTGDYSNGSAPKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMPAKFSGAT 733
             +  + G  D S+  A KGR  E+    QV NMGFQ S   PP  G DP+ M  K +   
Sbjct: 112  VEAQDVGPVDGSS-VAQKGRVIEMSHDVQVRNMGFQKSTPVPPGIGVDPSDMSRKNAIEP 170

Query: 734  PLLPDPGTDALRNAQQMQVNRV--PGNVNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTD 907
              LP  G+   R A QMQVN++    +VNRP+V++N +RP ++NG+T ++VG+LHWWTTD
Sbjct: 171  EPLPITGSAGPRGAPQMQVNQMHMSADVNRPVVNENQVRPPIENGSTTLYVGELHWWTTD 230

Query: 908  AELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLFNGRACVV 1087
            AELE   SQ+GRVKEIKFFDERASGKSKGYCQV+FYE+ AAAACKEGM+G +FNGR CVV
Sbjct: 231  AELESFASQFGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNGHVFNGRPCVV 290

Query: 1088 AFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDTGGRNFNK 1267
            AFASPQ+LKQMGA+Y+NK Q Q Q Q QGR   ND G+GRG  ANF +G    GGRN+ +
Sbjct: 291  AFASPQTLKQMGASYMNKTQGQPQTQSQGRGSMND-GAGRGGNANFQSG---DGGRNYGR 346

Query: 1268 VXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXXXXXX 1447
                                         KNM                Y Q         
Sbjct: 347  -GAWGRGGQGILNRGPGGGPMRGRGAMGPKNMAGNVAGVGSGANGGG-YGQGLAGPAFGG 404

Query: 1448 XXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGVAPHVNPA 1627
                    Q MMGAGFDP                               L GVAPHVNPA
Sbjct: 405  PAGGMMPPQGMMGAGFDPLYMGRGGGYGGFAGPGFPGMLPSFPAVNSMGLAGVAPHVNPA 464

Query: 1628 FFGR 1639
            FF R
Sbjct: 465  FFAR 468


>ref|XP_006852230.1| hypothetical protein AMTR_s00049p00146760 [Amborella trichopoda]
            gi|548855834|gb|ERN13697.1| hypothetical protein
            AMTR_s00049p00146760 [Amborella trichopoda]
          Length = 659

 Score =  321 bits (822), Expect = 1e-84
 Identities = 228/536 (42%), Positives = 268/536 (50%), Gaps = 33/536 (6%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYGS-QKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MDP+AEEQLDY DE+YG+ QKM +Q GGAISAL DEELMGEDDEYDDLYNDVNVG+GFMQ
Sbjct: 1    MDPMAEEQLDYEDEDYGANQKMPFQTGGAISALADEELMGEDDEYDDLYNDVNVGDGFMQ 60

Query: 365  MHQSETQVPSGGVGNGGH-PKTEGAG-PRVSESGPSQGVNLKLDGRGSTNAGSSFLQQNT 538
              Q +  V    +GNG   PK E    P V+  G       + D + S   G S L Q  
Sbjct: 61   SLQHQEPVQYESMGNGVQAPKEEPISTPPVNIPGVGHEEKGEKDAKLS---GFSDLDQK- 116

Query: 539  GGFNSNKGLEEGTGDYSNGSAP--KGRGTEIVAAPQVGNMGFQGSATAPPKFGADPN--- 703
                  K  +E   +   G++   K R +E V+ PQ    GF+ +A APP  G+  N   
Sbjct: 117  ------KAFQEQASNQLAGASSGLKIRVSEPVSEPQPQASGFR-NAPAPPAKGSGFNTAG 169

Query: 704  ------QMPAKFSGATPLL---PDPGTDALRNAQQMQVNRV--PGNVNRPIVSDNPIRPA 850
                  Q+    S A P +   P PG  A  NA    +NR+  PG      V D   R  
Sbjct: 170  AMDANKQLAQTSSNAVPRVGPGPGPGIGAGPNAN---MNRMMGPGPNQAGAVIDTSARFG 226

Query: 851  VDN-----------GTTMIFVGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGY 997
             +N           G TM+FVG+L WWTTDAELE VLSQYGRVK++KFFDERASGKSKGY
Sbjct: 227  SENSNRLSHGGGESGNTMLFVGELQWWTTDAELESVLSQYGRVKDLKFFDERASGKSKGY 286

Query: 998  CQVEFYESGAAAACKEGMHGFLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGR 1177
            CQVEFY+  AAAACKE M+G +FNGRACVVAFAS  +LKQ+   YLNK Q QAQAQ QGR
Sbjct: 287  CQVEFYDPAAAAACKESMNGHVFNGRACVVAFASQHTLKQLTTNYLNKTQAQAQAQSQGR 346

Query: 1178 RVPNDGGSGRGAGANFPAGAGDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXK 1357
            R  NDGG GR  G ++  G  + G    NK+                            K
Sbjct: 347  RPMNDGG-GRAGGPSYQGGDRNYG----NKMGWGRGNQGVPNRGQGPAGLRGRPGGLTGK 401

Query: 1358 NMMXXXXXXXXXXXXXNPYAQXXXXXXXXXXXXXXXXXQNMMGAGFDPT---XXXXXXXX 1528
             M+             NPY Q                 Q MMG+GFDPT           
Sbjct: 402  AMV-------GGPSGANPYGQALSAPPLGGPPGGLLHPQGMMGSGFDPTYGAHLGRGSGY 454

Query: 1529 XXXXXXXXXXXXXXXXXXXXXXLPGVAPHVNPAFFGRXXXXXXXXXXXXXXXEAHH 1696
                                  LPGVAPHVNPAFFGR               + HH
Sbjct: 455  GGFSGPHFPGMLPSFSPMGTVGLPGVAPHVNPAFFGRGVSANGMGMMGSGAMDGHH 510



 Score = 63.5 bits (153), Expect = 5e-07
 Identities = 31/57 (54%), Positives = 38/57 (66%)
 Frame = +2

Query: 1973 GHRDHXXXXXXXXXXXXXXXGQSSSRSRSKTHMMQEDDHRSRSRDGDYGKRRRLPSE 2143
            G+ DH               G++SSRSRSK+ MMQE+D RSRS+D DYGKRRR+PSE
Sbjct: 603  GYSDHRQRERDWDNEDDWDRGRTSSRSRSKSRMMQEEDQRSRSKDVDYGKRRRVPSE 659


>gb|EYU30596.1| hypothetical protein MIMGU_mgv1a002773mg [Mimulus guttatus]
          Length = 639

 Score =  318 bits (816), Expect = 6e-84
 Identities = 208/494 (42%), Positives = 256/494 (51%), Gaps = 10/494 (2%)
 Frame = +2

Query: 188  MDPLAEEQLDYGDEEYG-SQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQ 364
            MDP+ +EQLDYGDEEYG +QKMQY  GGAI AL ++E++G+DDEYDDLYNDVNVGEGFMQ
Sbjct: 1    MDPVTDEQLDYGDEEYGGNQKMQYHHGGAIPALAEDEMIGDDDEYDDLYNDVNVGEGFMQ 60

Query: 365  MHQSETQVPSGGVGNGGHPKTEGAGPRV-SESGPSQGVNL-KLDGRGSTNAGSSFLQQNT 538
            M +SE   PS  VGN     ++   P   +E+  SQ VN  ++   GS       L    
Sbjct: 61   MQRSEAPPPSA-VGNNSFSISKNTAPGTRAEAIASQEVNNGRVGNEGSYAPNGVQLSDQK 119

Query: 539  GGFNSNKGLEEGTGDYSNGSAPKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMPAK 718
                +  G  +        ++ + R  E+  + Q  ++G+QGS     K   D       
Sbjct: 120  NNLTAVGGPAQPVD-----ASQRVRLPEVANSSQAAHLGYQGSEIMLHKTATDRMNNSEN 174

Query: 719  FSGATPLLPDPGTDALRNAQQMQVN------RVPGNVNRPIVSDNPIRPAV-DNGTTMIF 877
              G    L  P T + +   Q   N       V  NVNR +  +  IRP+  +NG  MI+
Sbjct: 175  IVGEPASLVYPNTGSSKGVPQAPSNLMNSNANVNVNVNRSMDDEYLIRPSGGENGNPMIY 234

Query: 878  VGDLHWWTTDAELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHG 1057
            VG+LHWWTTDAE+E VL QYGRVKEIKFFDERASGKSKGYCQVEFY+  AA ACK+GM G
Sbjct: 235  VGELHWWTTDAEVESVLIQYGRVKEIKFFDERASGKSKGYCQVEFYDPAAATACKDGMQG 294

Query: 1058 FLFNGRACVVAFASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGA 1237
             +FNGRACVV +A+PQ+ KQMGA+Y NK Q Q+Q+Q QGR   ND G+GRG G N+P+G 
Sbjct: 295  HIFNGRACVVTYANPQTSKQMGASY-NKNQGQSQSQLQGRNPMND-GAGRGNGTNYPSG- 351

Query: 1238 GDTGGRNFNKVXXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYA 1417
                GRNF +                             KNM+               Y 
Sbjct: 352  --DAGRNFGR-GGGWGRGNQAPNRGPGAGPIRGRGGMGNKNMI----GNAPGAGGGGAYG 404

Query: 1418 QXXXXXXXXXXXXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXL 1597
            Q                 Q MMG GFD                                L
Sbjct: 405  Q-GLNGPGFGGPPGMMHPQGMMGPGFDLAFMGRGGGYGGFSGPPFQGMLPPFQGVNSMGL 463

Query: 1598 PGVAPHVNPAFFGR 1639
            PGVAPHVNPAFFGR
Sbjct: 464  PGVAPHVNPAFFGR 477


>ref|XP_006378268.1| hypothetical protein POPTR_0010s06150g [Populus trichocarpa]
            gi|550329195|gb|ERP56065.1| hypothetical protein
            POPTR_0010s06150g [Populus trichocarpa]
          Length = 591

 Score =  318 bits (815), Expect = 8e-84
 Identities = 205/483 (42%), Positives = 246/483 (50%), Gaps = 7/483 (1%)
 Frame = +2

Query: 212  LDYGDEEYGSQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQSETQVP 391
            +D+ +EE    KMQYQG GAI AL +EEL GEDDEYDDLYNDVNVGE F+QMH SE   P
Sbjct: 1    MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 392  SGGVGNGGHPKTEGAGPRVSESGPSQ-----GVNLKLDGRGSTNAGSSFLQQNTGGFNSN 556
                GNGG         RV E+G SQ     G  + ++G+ S NAG+ F +Q   G    
Sbjct: 56   PATAGNGGFQTRNAHESRV-ETGGSQVLATSGAGVAVEGKYS-NAGAHFPEQKQAGIG-- 111

Query: 557  KGLEEGTGDYSNGSAPKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMPAKFSGATP 736
                                   V A  VG++G+   ++   K  A P  +P        
Sbjct: 112  -----------------------VEANDVGSIGYGDGSSVAQKGSAGPRGVP-------- 140

Query: 737  LLPDPGTDALRNAQQMQVNRVPGN--VNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDA 910
                          QMQVN++  N  VNRP+V++N +RP ++NG T ++VG+LHWWTTDA
Sbjct: 141  --------------QMQVNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDA 186

Query: 911  ELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLFNGRACVVA 1090
            ELE V SQYGRVKEIKFFDERASGKSKGYCQV+FYE+ AAAACKEGM+  +FNGR CVVA
Sbjct: 187  ELESVASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVA 246

Query: 1091 FASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDTGGRNFNKV 1270
            FAS Q+LKQMGA+Y++K Q Q Q Q QGR   ND G GRG  AN+ +G    GGRN+ + 
Sbjct: 247  FASAQTLKQMGASYMSKTQGQPQPQSQGRGSMND-GMGRGGNANYQSG---DGGRNYGR- 301

Query: 1271 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXXXXXXX 1450
                                        KNM                Y Q          
Sbjct: 302  GGWGRGGQGVLNRGPGGGPMRGRGGMGPKNMAGNVAGVGSGANGGG-YGQGIAGPAFGGP 360

Query: 1451 XXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGVAPHVNPAF 1630
                   Q MMGAGFDP                               L GVAPHVNPAF
Sbjct: 361  AGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAF 420

Query: 1631 FGR 1639
            F R
Sbjct: 421  FAR 423


>ref|XP_002315647.1| RNA recognition motif-containing family protein [Populus trichocarpa]
            gi|222864687|gb|EEF01818.1| RNA recognition
            motif-containing family protein [Populus trichocarpa]
          Length = 573

 Score =  318 bits (815), Expect = 8e-84
 Identities = 205/483 (42%), Positives = 246/483 (50%), Gaps = 7/483 (1%)
 Frame = +2

Query: 212  LDYGDEEYGSQKMQYQGGGAISALTDEELMGEDDEYDDLYNDVNVGEGFMQMHQSETQVP 391
            +D+ +EE    KMQYQG GAI AL +EEL GEDDEYDDLYNDVNVGE F+QMH SE   P
Sbjct: 1    MDFEEEE----KMQYQGSGAIPALAEEEL-GEDDEYDDLYNDVNVGENFLQMHGSEAPAP 55

Query: 392  SGGVGNGGHPKTEGAGPRVSESGPSQ-----GVNLKLDGRGSTNAGSSFLQQNTGGFNSN 556
                GNGG         RV E+G SQ     G  + ++G+ S NAG+ F +Q   G    
Sbjct: 56   PATAGNGGFQTRNAHESRV-ETGGSQVLATSGAGVAVEGKYS-NAGAHFPEQKQAGIG-- 111

Query: 557  KGLEEGTGDYSNGSAPKGRGTEIVAAPQVGNMGFQGSATAPPKFGADPNQMPAKFSGATP 736
                                   V A  VG++G+   ++   K  A P  +P        
Sbjct: 112  -----------------------VEANDVGSIGYGDGSSVAQKGSAGPRGVP-------- 140

Query: 737  LLPDPGTDALRNAQQMQVNRVPGN--VNRPIVSDNPIRPAVDNGTTMIFVGDLHWWTTDA 910
                          QMQVN++  N  VNRP+V++N +RP ++NG T ++VG+LHWWTTDA
Sbjct: 141  --------------QMQVNQMNMNADVNRPVVNENQVRPPIENGPTTLYVGELHWWTTDA 186

Query: 911  ELEGVLSQYGRVKEIKFFDERASGKSKGYCQVEFYESGAAAACKEGMHGFLFNGRACVVA 1090
            ELE V SQYGRVKEIKFFDERASGKSKGYCQV+FYE+ AAAACKEGM+  +FNGR CVVA
Sbjct: 187  ELESVASQYGRVKEIKFFDERASGKSKGYCQVDFYEAAAAAACKEGMNEHVFNGRPCVVA 246

Query: 1091 FASPQSLKQMGAAYLNKAQVQAQAQPQGRRVPNDGGSGRGAGANFPAGAGDTGGRNFNKV 1270
            FAS Q+LKQMGA+Y++K Q Q Q Q QGR   ND G GRG  AN+ +G    GGRN+ + 
Sbjct: 247  FASAQTLKQMGASYMSKTQGQPQPQSQGRGSMND-GMGRGGNANYQSG---DGGRNYGR- 301

Query: 1271 XXXXXXXXXXXXXXXXXXXXXXXXXXXXKNMMXXXXXXXXXXXXXNPYAQXXXXXXXXXX 1450
                                        KNM                Y Q          
Sbjct: 302  GGWGRGGQGVLNRGPGGGPMRGRGGMGPKNMAGNVAGVGSGANGGG-YGQGIAGPAFGGP 360

Query: 1451 XXXXXXXQNMMGAGFDPTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXLPGVAPHVNPAF 1630
                   Q MMGAGFDP                               L GVAPHVNPAF
Sbjct: 361  AGGMMHHQGMMGAGFDPLYMGRGGGYGGFPGHGFPGMLPSFPAVNSMGLAGVAPHVNPAF 420

Query: 1631 FGR 1639
            F R
Sbjct: 421  FAR 423