BLASTX nr result
ID: Papaver25_contig00008424
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00008424
(454 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subc... 78 1e-12
ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854... 57 6e-12
dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|... 75 7e-12
dbj|BAK41507.1| polyprotein [Arabidopsis thaliana] 75 7e-12
emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera] 54 1e-11
emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera] 56 1e-11
emb|CAN71164.1| hypothetical protein VITISV_031057 [Vitis vinifera] 56 1e-11
emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera] 56 1e-11
dbj|BAA78423.1| polyprotein [Arabidopsis thaliana] 75 1e-11
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal... 75 1e-11
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th... 75 1e-11
dbj|BAK41511.1| polyprotein [Arabidopsis thaliana] 75 1e-11
gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis tha... 75 1e-11
gb|ABA95799.2| retrotransposon protein, putative, unclassified, ... 59 1e-11
gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subc... 60 1e-11
dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana] 74 2e-11
gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group] gi|... 71 2e-10
gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subc... 70 2e-10
gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subc... 70 4e-10
gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group... 65 1e-08
>gb|ABA95367.1| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 807
Score = 78.2 bits (191), Expect = 1e-12
Identities = 51/129 (39%), Positives = 71/129 (55%), Gaps = 6/129 (4%)
Frame = -3
Query: 374 SSIVDALIDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKT 195
+S+ ++L++SDVW + V G +++VSFI FS+FTW+Y L +KS+V F F+
Sbjct: 471 TSVSTRPLELVYSDVWGTAPSSVGGNKFYVSFIDDFSKFTWVYSLKHKSDVFQKFHEFQA 530
Query: 194 HVGKLFWYYHKTDAN*LG**IQNCLFFLDKLW------NPSEGQLSS*ASTERKHRYIVE 33
V +L + T G Q F DK+ P Q +S S ERKHR+IVE
Sbjct: 531 LVERLLGHKIITMQKDWGGEYQKLHSFFDKIGISHHVSCPYAHQQNS--SAERKHRHIVE 588
Query: 32 TGLALLNHA 6
GLALL HA
Sbjct: 589 VGLALLAHA 597
>ref|XP_003633051.1| PREDICTED: uncharacterized protein LOC100854333 [Vitis vinifera]
Length = 1689
Score = 56.6 bits (135), Expect(2) = 6e-12
Identities = 30/60 (50%), Positives = 37/60 (61%), Gaps = 1/60 (1%)
Frame = -3
Query: 353 IDLIHSDVWC-SQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKTHVGKLF 177
+DLIHSDVW S + F+Y+V+FI SRFTW+Y L KSEV TF F +V F
Sbjct: 419 LDLIHSDVWGPSPISSYEKFKYYVTFIDDHSRFTWVYFLRSKSEVFRTFTEFLAYVDNQF 478
Score = 39.3 bits (90), Expect(2) = 6e-12
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 190 LENYFGTTIKPMQTDWGSEYRIV--SSFLTSCGILQRVSCPHKHQRKG 53
++N F T+IK ++TD G EY +FL S GI+ + SCP Q+ G
Sbjct: 474 VDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNG 521
>dbj|BAA78425.1| polyprotein [Arabidopsis thaliana] gi|338746551|dbj|BAK41505.1|
polyprotein [Arabidopsis thaliana]
gi|338746553|dbj|BAK41506.1| polyprotein [Arabidopsis
thaliana] gi|338746557|dbj|BAK41508.1| polyprotein
[Arabidopsis thaliana] gi|338746559|dbj|BAK41509.1|
polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 75.5 bits (184), Expect = 7e-12
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKTHVGKLF- 177
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK V F
Sbjct: 505 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLVENRFQ 564
Query: 176 ----WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKHRYIVETGLALLNH 9
+Y + + L +P + +ERKHR+IVETGL LL+H
Sbjct: 565 TRIGTFYSDNGGEFVALREYFSQHGISHLTSPPHTPEHN-GLSERKHRHIVETGLTLLSH 623
Query: 8 A 6
A
Sbjct: 624 A 624
>dbj|BAK41507.1| polyprotein [Arabidopsis thaliana]
Length = 1447
Score = 75.5 bits (184), Expect = 7e-12
Identities = 46/121 (38%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKTHVGKLF- 177
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK V F
Sbjct: 505 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLVENRFQ 564
Query: 176 ----WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKHRYIVETGLALLNH 9
+Y + + L +P + +ERKHR+IVETGL LL+H
Sbjct: 565 TRIGTFYSDNGGEFVALREYFSQHGISHLTSPPHTPEHN-GLSERKHRHIVETGLTLLSH 623
Query: 8 A 6
A
Sbjct: 624 A 624
>emb|CAN67539.1| hypothetical protein VITISV_021584 [Vitis vinifera]
Length = 1652
Score = 53.9 bits (128), Expect(2) = 1e-11
Identities = 36/89 (40%), Positives = 44/89 (49%), Gaps = 1/89 (1%)
Frame = -3
Query: 440 SLLFNLYSVRLRHVSGPKFWV*SSIVDALIDLIHSDVWC-SQVKFVNGFRYHVSFIGIFS 264
+LLF L++ R H DLIHSDVW S V F+Y+V+FI S
Sbjct: 599 TLLFPLHASRASHC---------------FDLIHSDVWGPSPVSSHEKFKYYVTFIDDHS 643
Query: 263 RFTWLYPLAYKSEVSSTFQTFKTHVGKLF 177
RFTW+Y L K EV TF F +V F
Sbjct: 644 RFTWVYFLRSKFEVFRTFTEFLAYVDNQF 672
Score = 41.2 bits (95), Expect(2) = 1e-11
Identities = 21/48 (43%), Positives = 30/48 (62%), Gaps = 2/48 (4%)
Frame = -1
Query: 190 LENYFGTTIKPMQTDWGSEYRIV--SSFLTSCGILQRVSCPHKHQRKG 53
++N F T+IK ++TD G EY +FLTS GI+ + SCP Q+ G
Sbjct: 668 VDNQFSTSIKTLRTDSGGEYLSTEFQAFLTSKGIIHQRSCPSTPQQNG 715
>emb|CAN71267.1| hypothetical protein VITISV_017889 [Vitis vinifera]
Length = 1576
Score = 55.8 bits (133), Expect(2) = 1e-11
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -3
Query: 443 FSLLFNLYSVRLRHVSGPKFWV*SSIVDALIDLIHSDVWC-SQVKFVNGFRYHVSFIGIF 267
+SL S +L F + +S DLIHSDVW S V F+Y+V+FI
Sbjct: 664 YSLSLECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDH 723
Query: 266 SRFTWLYPLAYKSEVSSTFQTFKTHVGKLF 177
SRFTW+Y L KSEV TF F +V F
Sbjct: 724 SRFTWVYFLRSKSEVFRTFTEFLAYVDNQF 753
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 190 LENYFGTTIKPMQTDWGSEYRIV--SSFLTSCGILQRVSCPHKHQRKG 53
++N F T+IK ++TD G EY +FL S GI+ + SCP Q+ G
Sbjct: 749 VDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNG 796
>emb|CAN71164.1| hypothetical protein VITISV_031057 [Vitis vinifera]
Length = 1303
Score = 55.8 bits (133), Expect(2) = 1e-11
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -3
Query: 443 FSLLFNLYSVRLRHVSGPKFWV*SSIVDALIDLIHSDVWC-SQVKFVNGFRYHVSFIGIF 267
+SL S +L F + +S DLIHSDVW S V F+Y+V+FI
Sbjct: 642 YSLSLECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDH 701
Query: 266 SRFTWLYPLAYKSEVSSTFQTFKTHVGKLF 177
SRFTW+Y L KSEV TF F +V F
Sbjct: 702 SRFTWVYFLRSKSEVFRTFTEFLAYVDNQF 731
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 190 LENYFGTTIKPMQTDWGSEYRIV--SSFLTSCGILQRVSCPHKHQRKG 53
++N F T+IK ++TD G EY +FL S GI+ + SCP Q+ G
Sbjct: 727 VDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPFTPQQNG 774
>emb|CAN74794.1| hypothetical protein VITISV_041689 [Vitis vinifera]
Length = 845
Score = 55.8 bits (133), Expect(2) = 1e-11
Identities = 37/90 (41%), Positives = 46/90 (51%), Gaps = 1/90 (1%)
Frame = -3
Query: 443 FSLLFNLYSVRLRHVSGPKFWV*SSIVDALIDLIHSDVWC-SQVKFVNGFRYHVSFIGIF 267
+SL S +L F + +S DLIHSDVW S V F+Y+V+FI
Sbjct: 499 YSLSLECDSCKLGKSKTLPFPLHASRASHCFDLIHSDVWGPSPVSSHEKFKYYVTFIDDH 558
Query: 266 SRFTWLYPLAYKSEVSSTFQTFKTHVGKLF 177
SRFTW+Y L KSEV TF F +V F
Sbjct: 559 SRFTWVYFLRSKSEVFXTFTEFLAYVDNQF 588
Score = 39.3 bits (90), Expect(2) = 1e-11
Identities = 20/48 (41%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 190 LENYFGTTIKPMQTDWGSEYRIV--SSFLTSCGILQRVSCPHKHQRKG 53
++N F T+IK ++TD G EY +FL S GI+ + SCP Q+ G
Sbjct: 584 VDNQFSTSIKTLRTDSGGEYLSTEFQAFLASKGIIHQRSCPSTPQQNG 631
>dbj|BAA78423.1| polyprotein [Arabidopsis thaliana]
Length = 1431
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFK-------- 198
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK
Sbjct: 489 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQ 548
Query: 197 THVGKLF----------WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKH 48
T +G + W Y + L +P + +ERKH
Sbjct: 549 TRIGTFYSDNGGEFVALWEYFSQHG-------------ISHLTSPPHTPEHN-GLSERKH 594
Query: 47 RYIVETGLALLNHA 6
R+IVETGL LL+HA
Sbjct: 595 RHIVETGLTLLSHA 608
>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFK-------- 198
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK
Sbjct: 524 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQ 583
Query: 197 THVGKLF----------WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKH 48
T +G + W Y + L +P + +ERKH
Sbjct: 584 TRIGTFYSDNGGEFVALWEYFSQHG-------------ISHLTSPPHTPEHN-GLSERKH 629
Query: 47 RYIVETGLALLNHA 6
R+IVETGL LL+HA
Sbjct: 630 RHIVETGLTLLSHA 643
>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
Length = 847
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFK-------- 198
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK
Sbjct: 489 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQ 548
Query: 197 THVGKLF----------WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKH 48
T +G + W Y + L +P + +ERKH
Sbjct: 549 TRIGTFYSDNGGEFVALWEYFSQHG-------------ISHLTSPPHTPEHN-GLSERKH 594
Query: 47 RYIVETGLALLNHA 6
R+IVETGL LL+HA
Sbjct: 595 RHIVETGLTLLSHA 608
>dbj|BAK41511.1| polyprotein [Arabidopsis thaliana]
Length = 1466
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFK-------- 198
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK
Sbjct: 524 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQ 583
Query: 197 THVGKLF----------WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKH 48
T +G + W Y + L +P + +ERKH
Sbjct: 584 TRIGTFYSDNGGEFVALWEYFSQHG-------------ISHLTSPPHTPEHN-GLSERKH 629
Query: 47 RYIVETGLALLNHA 6
R+IVETGL LL+HA
Sbjct: 630 RHIVETGLTLLSHA 643
>gb|AAK62793.1|AC027036_14 polyprotein, putative [Arabidopsis thaliana]
gi|338746561|dbj|BAK41510.1| polyprotein [Arabidopsis
thaliana]
Length = 1466
Score = 74.7 bits (182), Expect = 1e-11
Identities = 47/134 (35%), Positives = 66/134 (49%), Gaps = 18/134 (13%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFK-------- 198
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK
Sbjct: 524 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQ 583
Query: 197 THVGKLF----------WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKH 48
T +G + W Y + L +P + +ERKH
Sbjct: 584 TRIGTFYSDNGGEFVALWEYFSQHG-------------ISHLTSPPHTPEHN-GLSERKH 629
Query: 47 RYIVETGLALLNHA 6
R+IVETGL LL+HA
Sbjct: 630 RHIVETGLTLLSHA 643
>gb|ABA95799.2| retrotransposon protein, putative, unclassified, expressed [Oryza
sativa Japonica Group]
Length = 2156
Score = 58.5 bits (140), Expect(2) = 1e-11
Identities = 26/57 (45%), Positives = 36/57 (63%)
Frame = -3
Query: 347 LIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKTHVGKLF 177
LIHSDVW S + ++G +Y V+FI +SR TWLY + +K EV FQ F ++ F
Sbjct: 911 LIHSDVWTSPMVSMSGMKYFVTFIDCYSRMTWLYLMRHKDEVFKCFQNFYAYIKNHF 967
Score = 36.2 bits (82), Expect(2) = 1e-11
Identities = 19/48 (39%), Positives = 29/48 (60%), Gaps = 2/48 (4%)
Frame = -1
Query: 190 LENYFGTTIKPMQTDWGSEY--RIVSSFLTSCGILQRVSCPHKHQRKG 53
++N+F ++ ++TD G EY SSFL+S GIL + SCP + G
Sbjct: 963 IKNHFNARVQFIRTDNGGEYINNEFSSFLSSEGILHQTSCPDTPPQNG 1010
>gb|ABA98286.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1478
Score = 60.1 bits (144), Expect(2) = 1e-11
Identities = 25/56 (44%), Positives = 37/56 (66%)
Frame = -1
Query: 211 FKLSRLMLENYFGTTIKPMQTDWGSEYRIVSSFLTSCGILQRVSCPHKHQRKGNTD 44
F+ ++M+E F I MQTDWG EY+ ++SF + GI+ VSCPH HQ+ G+ +
Sbjct: 589 FQEFQVMVERQFDRKILAMQTDWGGEYQSLNSFFSKIGIVHHVSCPHTHQQNGSAE 644
Score = 34.7 bits (78), Expect(2) = 1e-11
Identities = 15/20 (75%), Positives = 18/20 (90%)
Frame = -3
Query: 65 STERKHRYIVETGLALLNHA 6
S ERKHR+IVE GL+LL+HA
Sbjct: 642 SAERKHRHIVEIGLSLLSHA 661
>dbj|BAK41512.1| C-end truncated polyprotein [Arabidopsis thaliana]
Length = 1048
Score = 74.3 bits (181), Expect = 2e-11
Identities = 45/121 (37%), Positives = 65/121 (53%), Gaps = 5/121 (4%)
Frame = -3
Query: 353 IDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKTHVGKLF- 177
++ I+SDVW S + + +RY+V F+ F+R+TWLYPL KS+V TF TFK + F
Sbjct: 519 LEYIYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQ 578
Query: 176 ----WYYHKTDAN*LG**IQNCLFFLDKLWNPSEGQLSS*ASTERKHRYIVETGLALLNH 9
+Y + + L +P + +ERKHR+IVETGL LL+H
Sbjct: 579 TRIGTFYSDNGGEFVALREYFSQHGISHLTSPPHTPEHN-GLSERKHRHIVETGLTLLSH 637
Query: 8 A 6
A
Sbjct: 638 A 638
>gb|AAU43956.1| unknown protein [Oryza sativa Japonica Group]
gi|52353503|gb|AAU44069.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1447
Score = 70.9 bits (172), Expect = 2e-10
Identities = 49/129 (37%), Positives = 69/129 (53%), Gaps = 6/129 (4%)
Frame = -3
Query: 374 SSIVDALIDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKT 195
SS+ ++LI+SDVW + V G +Y+VSFIG +S+FTWLY + +KSEV F F+
Sbjct: 508 SSMSSHPLELIYSDVWGPALTSVGGKQYYVSFIGDYSKFTWLYLIKHKSEVIQKFHEFQA 567
Query: 194 HVGKLFWYYHKTDAN*LG**IQNCLFFLDKLW------NPSEGQLSS*ASTERKHRYIVE 33
V +LF + G + F K+ P Q + S ERKHR+IVE
Sbjct: 568 LVERLFNRKIIAMQSDWGGEYEKLHSFFTKIGITHHVSCPHTHQQN--GSAERKHRHIVE 625
Query: 32 TGLALLNHA 6
GL LL ++
Sbjct: 626 VGLTLLAYS 634
>gb|ABA98728.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1016
Score = 70.5 bits (171), Expect = 2e-10
Identities = 51/129 (39%), Positives = 66/129 (51%), Gaps = 6/129 (4%)
Frame = -3
Query: 374 SSIVDALIDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKT 195
SS+ ++L+ SDVW V +Y+VSFI FS+FTW+Y L KSEV S F F+
Sbjct: 119 SSVSSHPLELVFSDVWGPAPVSVESRKYYVSFIDDFSKFTWIYLLKNKSEVFSKFHEFQQ 178
Query: 194 HVGKLFWYYHKTDAN*LG**IQNCLFFLDKLW------NPSEGQLSS*ASTERKHRYIVE 33
V +LF + G + F K+ P Q + S ERKHR+IVE
Sbjct: 179 RVERLFNRKIISMQTDWGGEYEKLHSFFTKIGISHHVSCPYAHQQN--GSAERKHRHIVE 236
Query: 32 TGLALLNHA 6
GLALL HA
Sbjct: 237 VGLALLAHA 245
>gb|ABA97707.2| retrotransposon protein, putative, Ty1-copia subclass [Oryza sativa
Japonica Group]
Length = 1001
Score = 69.7 bits (169), Expect = 4e-10
Identities = 54/144 (37%), Positives = 70/144 (48%), Gaps = 6/144 (4%)
Frame = -3
Query: 419 SVRLRHVSGPKFWV*SSIVDALIDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPL 240
SVR R+ G + + S +L++SDVW V Y+VSFI FS+FTW+Y L
Sbjct: 237 SVRERYNGGEQIYTTSGS-----ELVYSDVWGPATDSVGRKNYYVSFIDDFSKFTWIYFL 291
Query: 239 AYKSEVSSTFQTFKTHVGKLFWYYHKTDAN*LG**IQNCLFFLDKLW------NPSEGQL 78
YKSEV FQ F + V +L G + F K+ P Q
Sbjct: 292 KYKSEVLQKFQEFLSFVERLLDRKIIAMQTDWGGEYEKLNSFFTKIGISHRVSCPHAHQQ 351
Query: 77 SS*ASTERKHRYIVETGLALLNHA 6
+ + ERKHR+IVE GLALL HA
Sbjct: 352 N--GAAERKHRHIVEVGLALLAHA 373
>gb|AAT07563.1| putative polyprotein [Oryza sativa Japonica Group]
gi|46981313|gb|AAT07631.1| putative polyprotein [Oryza
sativa Japonica Group]
Length = 1431
Score = 64.7 bits (156), Expect = 1e-08
Identities = 48/131 (36%), Positives = 71/131 (54%), Gaps = 8/131 (6%)
Frame = -3
Query: 374 SSIVDALIDLIHSDVWCSQVKFVNGFRYHVSFIGIFSRFTWLYPLAYKSEVSSTFQTFKT 195
+S+ + ++LIHSDVW + V +Y+VSFI +S+F W+Y L +KSEV F F+
Sbjct: 495 TSVSNNPLELIHSDVWGPASESVGAKKYYVSFIDDYSKFVWIYFLKHKSEVFQKFHEFQK 554
Query: 194 HVGKLF---WYYHKTDAN*LG**IQNCLFFLD-----KLWNPSEGQLSS*ASTERKHRYI 39
V + F +TD G ++ FF + + P Q + + ERKHR+I
Sbjct: 555 LVERQFDRKILSMQTDWG--GEYLKLHTFFNEIGISHHVSCPHTHQQN--GAVERKHRHI 610
Query: 38 VETGLALLNHA 6
VE GL+LL HA
Sbjct: 611 VEVGLSLLAHA 621