BLASTX nr result
ID: Papaver25_contig00008100
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00008100
(962 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
emb|CBI24961.3| unnamed protein product [Vitis vinifera] 182 1e-43
ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-... 182 1e-43
ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [A... 171 3e-41
ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD,... 160 7e-37
ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD,... 159 2e-36
ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citr... 159 2e-36
gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis] 159 2e-36
ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prun... 156 1e-35
ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [... 152 2e-34
ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Popu... 149 1e-33
ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Popu... 149 1e-33
ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Popu... 149 1e-33
ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Popu... 149 1e-33
ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana] gi|752165... 148 4e-33
ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Caps... 147 5e-33
ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD,... 145 1e-32
ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD,... 145 2e-32
ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD,... 145 2e-32
ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutr... 145 3e-32
dbj|BAA78111.1| RNA polymerase sigma subunit SigD* [Arabidopsis ... 144 5e-32
>emb|CBI24961.3| unnamed protein product [Vitis vinifera]
Length = 319
Score = 182 bits (463), Expect = 1e-43
Identities = 92/128 (71%), Positives = 108/128 (84%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KE A LEAAR ++ A+TR+ EPT ++WAEAVG+KRSSL++ + +SR RI SYRRLV
Sbjct: 36 KEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERINQSYRRLV 94
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIA YQGKGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWI+QAI+RAI KS
Sbjct: 95 VSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKS 154
Query: 594 RTIRLPGS 617
R IRLPGS
Sbjct: 155 RIIRLPGS 162
>ref|XP_002272444.1| PREDICTED: RNA polymerase sigma factor rpoD-like [Vitis vinifera]
Length = 426
Score = 182 bits (463), Expect = 1e-43
Identities = 92/128 (71%), Positives = 108/128 (84%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KE A LEAAR ++ A+TR+ EPT ++WAEAVG+KRSSL++ + +SR RI SYRRLV
Sbjct: 143 KEEAGLEAARRRI-AETREHEPTSNQWAEAVGIKRSSLDKMLCNGRESRERINQSYRRLV 201
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIA YQGKGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWI+QAI+RAI KS
Sbjct: 202 VSIAARYQGKGLSLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIRQAIVRAIANKS 261
Query: 594 RTIRLPGS 617
R IRLPGS
Sbjct: 262 RIIRLPGS 269
>ref|XP_006851106.1| hypothetical protein AMTR_s00025p00248060 [Amborella trichopoda]
gi|548854777|gb|ERN12687.1| hypothetical protein
AMTR_s00025p00248060 [Amborella trichopoda]
Length = 449
Score = 171 bits (434), Expect(2) = 3e-41
Identities = 87/128 (67%), Positives = 103/128 (80%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
+EGARLE R KL + R EP+ +WAEAVGM+ SS+ER + + RNRIT SYRRLV
Sbjct: 164 REGARLEGIRRKL-REKRGREPSRGQWAEAVGMRESSMERRLGIARECRNRITNSYRRLV 222
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT+Y GKG+SL DL+QEGS+GLLRGAERFD +G+KLSTYVYWWIKQAII+AI KS
Sbjct: 223 VSIATSYPGKGMSLSDLIQEGSLGLLRGAERFDHRRGYKLSTYVYWWIKQAIIKAIATKS 282
Query: 594 RTIRLPGS 617
R +RLPGS
Sbjct: 283 RIVRLPGS 290
Score = 24.6 bits (52), Expect(2) = 3e-41
Identities = 10/16 (62%), Positives = 14/16 (87%)
Frame = +2
Query: 188 NYLTAKEEAEFSMDLK 235
+YLT +EEAEFS+ L+
Sbjct: 149 DYLTRREEAEFSLCLR 164
>ref|XP_004308689.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Fragaria vesca subsp. vesca]
Length = 452
Score = 160 bits (405), Expect = 7e-37
Identities = 80/127 (62%), Positives = 102/127 (80%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGA+LE+ R + + + ++ EPT + A A+ +K SS+++ I +S+ RI SYR LV
Sbjct: 169 KEGAKLESERTR-FTEAQEHEPTSKQLANAMRIKMSSIDKVICNRRESQERIIKSYRGLV 227
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VS+A++YQGKGLSLQDL+QEGSIGLLRGAE+FDP +G KLSTYVYWWI+QAIIRAIE KS
Sbjct: 228 VSVASSYQGKGLSLQDLIQEGSIGLLRGAEKFDPERGLKLSTYVYWWIRQAIIRAIENKS 287
Query: 594 RTIRLPG 614
R IRLPG
Sbjct: 288 RIIRLPG 294
>ref|XP_006482924.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Citrus sinensis]
Length = 436
Score = 159 bits (402), Expect = 2e-36
Identities = 82/128 (64%), Positives = 100/128 (78%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGA+LE AR K A + E + A+A GMK+S +++ + + +S+ RI SYR LV
Sbjct: 153 KEGAKLEEAR-KTVAQAEEHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLV 211
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT YQGKGLSL+DL+QEGSIGLLRGA+RF+P +G+KLSTYVYWWIKQAIIR I KS
Sbjct: 212 VSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKS 271
Query: 594 RTIRLPGS 617
RTIRLPGS
Sbjct: 272 RTIRLPGS 279
>ref|XP_006438958.1| hypothetical protein CICLE_v10033747mg [Citrus clementina]
gi|557541154|gb|ESR52198.1| hypothetical protein
CICLE_v10033747mg [Citrus clementina]
Length = 436
Score = 159 bits (402), Expect = 2e-36
Identities = 82/128 (64%), Positives = 100/128 (78%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGA+LE AR K A + E + A+A GMK+S +++ + + +S+ RI SYR LV
Sbjct: 153 KEGAKLEEAR-KTVAQAEEHESISKQLAKATGMKQSKVDKILCKERESQERIIRSYRSLV 211
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT YQGKGLSL+DL+QEGSIGLLRGA+RF+P +G+KLSTYVYWWIKQAIIR I KS
Sbjct: 212 VSIATGYQGKGLSLKDLIQEGSIGLLRGAKRFNPERGYKLSTYVYWWIKQAIIRTIANKS 271
Query: 594 RTIRLPGS 617
RTIRLPGS
Sbjct: 272 RTIRLPGS 279
>gb|EXB95293.1| RNA polymerase sigma factor rpoD [Morus notabilis]
Length = 422
Score = 159 bits (401), Expect = 2e-36
Identities = 84/166 (50%), Positives = 114/166 (68%)
Frame = +3
Query: 228 ISKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRR 407
I KEGA+LEA R ++ ++ EPT E A+A+GM+ S+++ + +S+ RI+ SYRR
Sbjct: 134 ILKEGAKLEATRLRM-TNSEDHEPTSKELAKAMGMEMRSIDKMLCDKRESQERISRSYRR 192
Query: 408 LVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQ 587
LVVS+A YQGKGLS DL+QEGS+GLLRGA++FDP +G KLSTYVYWWI+QAIIRAIE
Sbjct: 193 LVVSVAAGYQGKGLSFPDLIQEGSVGLLRGAQKFDPQRGNKLSTYVYWWIRQAIIRAIEN 252
Query: 588 KSRTIRLPGSTTYYCIMHQLHNAWVLVGL*EGPTRATSTLDKHVKR 725
KSR +RLPG+ + G+ T A + L+K ++R
Sbjct: 253 KSRVVRLPGN---------------MCGIVAKVTEANNVLNKRLRR 283
>ref|XP_007219201.1| hypothetical protein PRUPE_ppa017025mg [Prunus persica]
gi|462415663|gb|EMJ20400.1| hypothetical protein
PRUPE_ppa017025mg [Prunus persica]
Length = 440
Score = 156 bits (394), Expect = 1e-35
Identities = 78/127 (61%), Positives = 102/127 (80%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGARLE+ R ++ + +K EPT + A+A+GMK S+++ + + +S+ +I SYR LV
Sbjct: 157 KEGARLESERFRV-VEAQKHEPTSKQLAKAMGMKMRSIDKVLCKRRESQEKIIRSYRGLV 215
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VS+A++YQGKGLS QDL+QEGSIGLLRGAE+FD + +KLSTYVYWWI+QAIIRAIE KS
Sbjct: 216 VSVASSYQGKGLSFQDLIQEGSIGLLRGAEKFDHEREWKLSTYVYWWIRQAIIRAIENKS 275
Query: 594 RTIRLPG 614
R IRLPG
Sbjct: 276 RIIRLPG 282
>ref|XP_002517769.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
gi|223543041|gb|EEF44576.1| RNA polymerase sigma factor
rpoD, putative [Ricinus communis]
Length = 389
Score = 152 bits (384), Expect = 2e-34
Identities = 77/128 (60%), Positives = 102/128 (79%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
K+ AR+EAAR ++ A+T++ EPT + AEA+ M++ ++++ + + QSR RIT +YRRLV
Sbjct: 130 KDHARVEAARRRI-AETQEHEPTSKQLAEALRMRKKNVDKILCKGRQSRERITGNYRRLV 188
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
+SIA Y+GKGLSLQDL+QEGSIGLLRGAERFDP +G KLSTYVYWWIK+AII +I S
Sbjct: 189 LSIANRYRGKGLSLQDLIQEGSIGLLRGAERFDPKRGNKLSTYVYWWIKEAIITSISINS 248
Query: 594 RTIRLPGS 617
R +R P S
Sbjct: 249 RIVRQPRS 256
>ref|XP_006379084.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331146|gb|ERP56881.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 423
Score = 149 bits (377), Expect = 1e-33
Identities = 73/126 (57%), Positives = 100/126 (79%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
K AR+EAAR ++ + ++ +PT + A+A+ M+++S++ + + +SR +I SYRRLV
Sbjct: 139 KHEARIEAARRRI-GEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLV 197
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT+YQ KGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIK+AI+ AI +
Sbjct: 198 VSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNT 257
Query: 594 RTIRLP 611
R +RLP
Sbjct: 258 RMVRLP 263
>ref|XP_006379082.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331144|gb|ERP56879.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 284
Score = 149 bits (377), Expect = 1e-33
Identities = 73/126 (57%), Positives = 100/126 (79%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
K AR+EAAR ++ + ++ +PT + A+A+ M+++S++ + + +SR +I SYRRLV
Sbjct: 139 KHEARIEAARRRI-GEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLV 197
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT+YQ KGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIK+AI+ AI +
Sbjct: 198 VSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNT 257
Query: 594 RTIRLP 611
R +RLP
Sbjct: 258 RMVRLP 263
>ref|XP_006379081.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331143|gb|ERP56878.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 276
Score = 149 bits (377), Expect = 1e-33
Identities = 73/126 (57%), Positives = 100/126 (79%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
K AR+EAAR ++ + ++ +PT + A+A+ M+++S++ + + +SR +I SYRRLV
Sbjct: 139 KHEARIEAARRRI-GEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLV 197
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT+YQ KGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIK+AI+ AI +
Sbjct: 198 VSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNT 257
Query: 594 RTIRLP 611
R +RLP
Sbjct: 258 RMVRLP 263
>ref|XP_006379080.1| hypothetical protein POPTR_0009s06210g [Populus trichocarpa]
gi|550331142|gb|ERP56877.1| hypothetical protein
POPTR_0009s06210g [Populus trichocarpa]
Length = 331
Score = 149 bits (377), Expect = 1e-33
Identities = 73/126 (57%), Positives = 100/126 (79%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
K AR+EAAR ++ + ++ +PT + A+A+ M+++S++ + + +SR +I SYRRLV
Sbjct: 139 KHEARIEAARRRI-GEVQELDPTSKQLAKALRMEKNSVDNVLCKGRESREKIIRSYRRLV 197
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT+YQ KGLSLQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIK+AI+ AI +
Sbjct: 198 VSIATSYQDKGLSLQDLIQEGSIGLLRGAERFDPQRGYKLSTYVYWWIKEAILTAISNNT 257
Query: 594 RTIRLP 611
R +RLP
Sbjct: 258 RMVRLP 263
>ref|NP_196877.1| sigma factor 4 [Arabidopsis thaliana]
gi|75216509|sp|Q9ZSL6.1|SIGD_ARATH RecName: Full=RNA
polymerase sigma factor sigD, chloroplastic; Short=Sigma
factor D; Short=Sigma-D; AltName: Full=RNA polymerase
sigma factor sig4; Short=Atsig4; Short=Sigma factor 4;
Flags: Precursor gi|3983260|gb|AAC97954.1| sigma-like
factor [Arabidopsis thaliana] gi|4972296|dbj|BAA78110.1|
RNA polymerase sigma subunit SigD [Arabidopsis thaliana]
gi|9758039|dbj|BAB08700.1| sigma-like factor
[Arabidopsis thaliana] gi|332004550|gb|AED91933.1| sigma
factor 4 [Arabidopsis thaliana]
Length = 419
Score = 148 bits (373), Expect = 4e-33
Identities = 77/128 (60%), Positives = 91/128 (71%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGA+LE L + E A G K+ S + R ++R +IT YRRLV
Sbjct: 136 KEGAKLE----NLGTSVEENEMVSVLLASGRGKKKRSANEILCRRKEAREKITRCYRRLV 191
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT YQGKGL+LQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI KS
Sbjct: 192 VSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKS 251
Query: 594 RTIRLPGS 617
R ++LPGS
Sbjct: 252 RLVKLPGS 259
>ref|XP_006287834.1| hypothetical protein CARUB_v10001054mg [Capsella rubella]
gi|482556540|gb|EOA20732.1| hypothetical protein
CARUB_v10001054mg [Capsella rubella]
Length = 419
Score = 147 bits (372), Expect = 5e-33
Identities = 76/128 (59%), Positives = 92/128 (71%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGA+LE L ++ E + G K+ S + R ++R +IT YRRLV
Sbjct: 136 KEGAKLE----NLGTSAQENEMVSVLLSSGKGKKKRSANEILCRRKEAREKITRCYRRLV 191
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT YQGKGL+LQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI KS
Sbjct: 192 VSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKS 251
Query: 594 RTIRLPGS 617
R ++LPGS
Sbjct: 252 RLVKLPGS 259
>ref|XP_004231123.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Solanum lycopersicum]
Length = 442
Score = 145 bits (365), Expect(2) = 1e-32
Identities = 71/133 (53%), Positives = 97/133 (72%)
Frame = +3
Query: 219 SPWISKEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLS 398
S W+ +E AR+E R K+ +T + + + + A+A GM L++ ++ +S+ +I
Sbjct: 153 SGWVKREEARIEILR-KMVEETSEIDLSSKQLAKAAGMSTRRLDKLLINAKESQKKIIQC 211
Query: 399 YRRLVVSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRA 578
YR LVVS+A +YQGKGLSLQDL+QEGSIGLL GA++F+P KG+KLSTY YWWI+QAI RA
Sbjct: 212 YRGLVVSVAASYQGKGLSLQDLIQEGSIGLLHGAKKFNPKKGYKLSTYAYWWIRQAISRA 271
Query: 579 IEQKSRTIRLPGS 617
+ KSR IRLPGS
Sbjct: 272 VANKSRVIRLPGS 284
Score = 22.3 bits (46), Expect(2) = 1e-32
Identities = 10/15 (66%), Positives = 12/15 (80%)
Frame = +2
Query: 191 YLTAKEEAEFSMDLK 235
YLT KEEA++S LK
Sbjct: 123 YLTHKEEAKYSWYLK 137
>ref|XP_004169825.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 341
Score = 145 bits (366), Expect = 2e-32
Identities = 70/127 (55%), Positives = 95/127 (74%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KE LE + ++ +T++ EPT + A A+G K ++R + R +SR+R+ Y +LV
Sbjct: 58 KEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLV 116
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
+SIA YQGKGLSLQDL QEG+IGLL+GAERF+P +G KLSTY YWWI+QAIIRA+++KS
Sbjct: 117 ISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKS 176
Query: 594 RTIRLPG 614
R +RLPG
Sbjct: 177 RLVRLPG 183
>ref|XP_004149725.1| PREDICTED: RNA polymerase sigma factor sigD, chloroplastic-like
[Cucumis sativus]
Length = 436
Score = 145 bits (366), Expect = 2e-32
Identities = 70/127 (55%), Positives = 95/127 (74%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KE LE + ++ +T++ EPT + A A+G K ++R + R +SR+R+ Y +LV
Sbjct: 153 KEAVLLENVKTRIM-ETQEHEPTNKQLAIAMGTKSGCIDRILCRARESRDRLIRCYSKLV 211
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
+SIA YQGKGLSLQDL QEG+IGLL+GAERF+P +G KLSTY YWWI+QAIIRA+++KS
Sbjct: 212 ISIAAPYQGKGLSLQDLTQEGNIGLLKGAERFEPNRGHKLSTYAYWWIRQAIIRALDKKS 271
Query: 594 RTIRLPG 614
R +RLPG
Sbjct: 272 RLVRLPG 278
>ref|XP_006399871.1| hypothetical protein EUTSA_v10013654mg [Eutrema salsugineum]
gi|557100961|gb|ESQ41324.1| hypothetical protein
EUTSA_v10013654mg [Eutrema salsugineum]
Length = 421
Score = 145 bits (365), Expect = 3e-32
Identities = 75/128 (58%), Positives = 91/128 (71%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGA+LE + + E + G K+ S + R ++R +IT YRRLV
Sbjct: 138 KEGAKLE----NVGTSVEENEIVSVLLSSGKGKKKRSANEILCRRREAREKITRCYRRLV 193
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT YQGKGL+LQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI KS
Sbjct: 194 VSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPERGYKLSTYVYWWIKQAILRAIAHKS 253
Query: 594 RTIRLPGS 617
R ++LPGS
Sbjct: 254 RLVKLPGS 261
>dbj|BAA78111.1| RNA polymerase sigma subunit SigD* [Arabidopsis thaliana]
gi|16649075|gb|AAL24389.1| sigma-like factor
[Arabidopsis thaliana] gi|21387209|gb|AAM48008.1|
sigma-like factor [Arabidopsis thaliana]
Length = 267
Score = 144 bits (363), Expect = 5e-32
Identities = 75/126 (59%), Positives = 89/126 (70%)
Frame = +3
Query: 234 KEGARLEAARNKLWADTRKEEPTISEWAEAVGMKRSSLERAILRISQSRNRITLSYRRLV 413
KEGA+LE L + E A G K+ S + R ++R +IT YRRLV
Sbjct: 136 KEGAKLE----NLGTSVEENEMVSVLLASGRGKKKRSANEILCRRKEAREKITRCYRRLV 191
Query: 414 VSIATAYQGKGLSLQDLVQEGSIGLLRGAERFDPGKGFKLSTYVYWWIKQAIIRAIEQKS 593
VSIAT YQGKGL+LQDL+QEGSIGLLRGAERFDP +G+KLSTYVYWWIKQAI+RAI KS
Sbjct: 192 VSIATGYQGKGLNLQDLIQEGSIGLLRGAERFDPDRGYKLSTYVYWWIKQAILRAIAHKS 251
Query: 594 RTIRLP 611
R ++LP
Sbjct: 252 RLVKLP 257