BLASTX nr result

ID: Papaver25_contig00007548 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00007548
         (1331 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Popu...    61   1e-06
ref|XP_004304353.1| PREDICTED: exosome complex component RRP43-l...    61   1e-06
ref|XP_004304352.1| PREDICTED: exosome complex component RRP43-l...    61   1e-06
ref|XP_002322717.1| 3' exoribonuclease domain 1-containing famil...    61   1e-06
ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Popu...    60   2e-06
emb|CBI29839.3| unnamed protein product [Vitis vinifera]               59   4e-06
ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-l...    59   4e-06
emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]    59   4e-06
ref|XP_002532079.1| exosome complex exonuclease rrp43, putative ...    59   5e-06
ref|XP_007046028.1| Anaphase-promoting complex/cyclosome 2 isofo...    59   6e-06
ref|XP_007046027.1| Anaphase-promoting complex/cyclosome 2 isofo...    59   6e-06

>ref|XP_006373782.1| hypothetical protein POPTR_0016s05590g [Populus trichocarpa]
           gi|550320907|gb|ERP51579.1| hypothetical protein
           POPTR_0016s05590g [Populus trichocarpa]
          Length = 323

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 44/56 (78%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEE 779
           DG+LFDAALLSA+ AFS L IP++S +ND+GK++ +S  ++G K+  EP+NK K +
Sbjct: 179 DGALFDAALLSAVAAFSHLQIPIVS-LNDDGKIVLVSEEDEGAKLEKEPVNKEKRK 233


>ref|XP_004304353.1| PREDICTED: exosome complex component RRP43-like isoform 2 [Fragaria
           vesca subsp. vesca]
          Length = 300

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 40/92 (43%), Positives = 54/92 (58%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEETYSD 767
           DG+LFDAALLSA+ AFS L IPV+S MN+EGKV+ +S  N+G K   EP+NK K +    
Sbjct: 159 DGALFDAALLSAVAAFSHLQIPVVS-MNNEGKVVVMSEENEGGK---EPVNKEKRK---- 210

Query: 766 ISILILQTLLKKLM*ISHIS*PEQLTCLKFEN 671
                          ++  S P  LTC+ ++N
Sbjct: 211 ---------------LTLCSIPFSLTCILYKN 227


>ref|XP_004304352.1| PREDICTED: exosome complex component RRP43-like isoform 1 [Fragaria
           vesca subsp. vesca]
          Length = 328

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 40/92 (43%), Positives = 54/92 (58%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEETYSD 767
           DG+LFDAALLSA+ AFS L IPV+S MN+EGKV+ +S  N+G K   EP+NK K +    
Sbjct: 159 DGALFDAALLSAVAAFSHLQIPVVS-MNNEGKVVVMSEENEGGK---EPVNKEKRK---- 210

Query: 766 ISILILQTLLKKLM*ISHIS*PEQLTCLKFEN 671
                          ++  S P  LTC+ ++N
Sbjct: 211 ---------------LTLCSIPFSLTCILYKN 227


>ref|XP_002322717.1| 3' exoribonuclease domain 1-containing family protein [Populus
           trichocarpa] gi|222867347|gb|EEF04478.1| 3'
           exoribonuclease domain 1-containing family protein
           [Populus trichocarpa]
          Length = 439

 Score = 61.2 bits (147), Expect = 1e-06
 Identities = 30/56 (53%), Positives = 44/56 (78%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEE 779
           DG+LFDAALLSA+ AFS L IP++S +ND+GK++ +S  ++G K+  EP+NK K +
Sbjct: 179 DGALFDAALLSAVAAFSHLQIPIVS-LNDDGKIVLVSEEDEGAKLEKEPVNKEKRK 233


>ref|XP_006381009.1| hypothetical protein POPTR_0006s04970g [Populus trichocarpa]
           gi|550335486|gb|ERP58806.1| hypothetical protein
           POPTR_0006s04970g [Populus trichocarpa]
          Length = 303

 Score = 60.5 bits (145), Expect = 2e-06
 Identities = 30/56 (53%), Positives = 43/56 (76%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEE 779
           DG+LFDAALLSA+ AFS L IP++S +ND+GK++ +S  + G K+  EP+NK K +
Sbjct: 159 DGALFDAALLSAVGAFSHLQIPIVS-LNDDGKIVLVSEEDDGTKLEEEPVNKEKRK 213


>emb|CBI29839.3| unnamed protein product [Vitis vinifera]
          Length = 311

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 39/93 (41%), Positives = 54/93 (58%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEETYSD 767
           DGSLFDAALL+A+ AFS L IPV+S +N+EG+V+ +S  N+  K   EP+NK K +    
Sbjct: 167 DGSLFDAALLAAVAAFSHLRIPVVS-LNEEGRVVVVSEENEEGKSEKEPVNKGKRK---- 221

Query: 766 ISILILQTLLKKLM*ISHIS*PEQLTCLKFENH 668
              L L +L            P  LTC+  +N+
Sbjct: 222 ---LTLSSL------------PFSLTCILHKNY 239


>ref|XP_002284088.1| PREDICTED: exosome complex component RRP43-like [Vitis vinifera]
          Length = 303

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 39/93 (41%), Positives = 54/93 (58%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEETYSD 767
           DGSLFDAALL+A+ AFS L IPV+S +N+EG+V+ +S  N+  K   EP+NK K +    
Sbjct: 159 DGSLFDAALLAAVAAFSHLRIPVVS-LNEEGRVVVVSEENEEGKSEKEPVNKGKRK---- 213

Query: 766 ISILILQTLLKKLM*ISHIS*PEQLTCLKFENH 668
              L L +L            P  LTC+  +N+
Sbjct: 214 ---LTLSSL------------PFSLTCILHKNY 231


>emb|CAN82224.1| hypothetical protein VITISV_011872 [Vitis vinifera]
          Length = 1621

 Score = 59.3 bits (142), Expect = 4e-06
 Identities = 39/93 (41%), Positives = 54/93 (58%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEETYSD 767
           DGSLFDAALL+A+ AFS L IPV+S +N+EG+V+ +S  N+  K   EP+NK K +    
Sbjct: 160 DGSLFDAALLAAVAAFSHLRIPVVS-LNEEGRVVVVSEENEEGKSEKEPVNKGKRK---- 214

Query: 766 ISILILQTLLKKLM*ISHIS*PEQLTCLKFENH 668
              L L +L            P  LTC+  +N+
Sbjct: 215 ---LTLSSL------------PFSLTCILHKNY 232


>ref|XP_002532079.1| exosome complex exonuclease rrp43, putative [Ricinus communis]
           gi|223528261|gb|EEF30313.1| exosome complex exonuclease
           rrp43, putative [Ricinus communis]
          Length = 303

 Score = 58.9 bits (141), Expect = 5e-06
 Identities = 38/93 (40%), Positives = 55/93 (59%)
 Frame = -2

Query: 946 DGSLFDAALLSAIVAFSSLCIPVLSIMNDEGKVIALSVANKGNKIVHEPLNK*KEETYSD 767
           DGSLFDAAL SA+ AF++L IP++S +ND+GKV+ +S  N+G K   E +NK K +    
Sbjct: 159 DGSLFDAALFSAVAAFTNLQIPIVS-LNDDGKVVVVSDENEGGKREKEAVNKEKRK---- 213

Query: 766 ISILILQTLLKKLM*ISHIS*PEQLTCLKFENH 668
              L L++L            P  LTC+  +N+
Sbjct: 214 ---LTLRSL------------PFSLTCVLHKNY 231


>ref|XP_007046028.1| Anaphase-promoting complex/cyclosome 2 isoform 2 [Theobroma cacao]
           gi|508709963|gb|EOY01860.1| Anaphase-promoting
           complex/cyclosome 2 isoform 2 [Theobroma cacao]
          Length = 879

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = -3

Query: 552 GILLESL-LDSDNHIFTFVDG---APRNGANSANYEE--AADEDGKRFVASIEEKILKEM 391
           G+L ESL  D  NH+FT VDG     +NG NS N EE  A DE+ +R VASIE+++ KEM
Sbjct: 753 GVLTESLGTDPSNHVFTLVDGMVDTSKNGGNSGNCEELLAGDEEPERSVASIEDQLRKEM 812

Query: 390 TVH 382
           TV+
Sbjct: 813 TVY 815


>ref|XP_007046027.1| Anaphase-promoting complex/cyclosome 2 isoform 1 [Theobroma cacao]
           gi|590699863|ref|XP_007046029.1| Anaphase-promoting
           complex/cyclosome 2 isoform 1 [Theobroma cacao]
           gi|508709962|gb|EOY01859.1| Anaphase-promoting
           complex/cyclosome 2 isoform 1 [Theobroma cacao]
           gi|508709964|gb|EOY01861.1| Anaphase-promoting
           complex/cyclosome 2 isoform 1 [Theobroma cacao]
          Length = 877

 Score = 58.5 bits (140), Expect = 6e-06
 Identities = 34/63 (53%), Positives = 43/63 (68%), Gaps = 6/63 (9%)
 Frame = -3

Query: 552 GILLESL-LDSDNHIFTFVDG---APRNGANSANYEE--AADEDGKRFVASIEEKILKEM 391
           G+L ESL  D  NH+FT VDG     +NG NS N EE  A DE+ +R VASIE+++ KEM
Sbjct: 751 GVLTESLGTDPSNHVFTLVDGMVDTSKNGGNSGNCEELLAGDEEPERSVASIEDQLRKEM 810

Query: 390 TVH 382
           TV+
Sbjct: 811 TVY 813


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