BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00006790
         (2335 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populu...  1139   0.0  
ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populu...  1134   0.0  
ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Rici...  1116   0.0  
ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prun...  1110   0.0  
ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [V...  1107   0.0  
ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma ca...  1091   0.0  
ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1088   0.0  
gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]      1081   0.0  
ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1076   0.0  
ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1076   0.0  
gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicot...  1075   0.0  
gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]    1071   0.0  
gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]    1064   0.0  
dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1064   0.0  
gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]  1062   0.0  
gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutu...  1061   0.0  
ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1056   0.0  
ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis...  1055   0.0  
emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]   1054   0.0  
ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-li...  1053   0.0  

>ref|XP_002324295.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222865729|gb|EEF02860.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1200

 Score = 1139 bits (2945), Expect = 0.0
 Identities = 547/782 (69%), Positives = 638/782 (81%), Gaps = 4/782 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  F++ TAFS K TS HAV+KCDFK EF VRDINE+  Y +    ++ 
Sbjct: 160  DFLVDPFDGTCKFCFSRNTAFSLKSTSEHAVIKCDFKVEFLVRDINEIIQYTETSCLVLL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL S+P ++YRTADDDI A VPFDLLDD+DPWIRTTDFT++  IGRC+SYR+ +PPR G
Sbjct: 220  LQLASAPWVWYRTADDDIEAWVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHG 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKFR----EEPDFGSPMPDPFFCFHPKEKISFELLFLV 1808
             KL++A++YLK+ R+        + R    +EPDFG PM DPFFC H KE I+FE+LFLV
Sbjct: 280  SKLRKAVKYLKERRVQVLQEENHRRRIRILDEPDFGMPMSDPFFCIHHKEGIAFEVLFLV 339

Query: 1807 NAAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLK 1628
            NA +HKGIF+  QLS+ FF+LLR+   EVNV+AL +I + + PVF+   RL+ VQ  LLK
Sbjct: 340  NAVMHKGIFNQHQLSNDFFDLLRNQHTEVNVSALKHICTYRRPVFNAYRRLKAVQEWLLK 399

Query: 1627 NPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEG 1448
            NP + K+ K LGD  E+RRL+ITPTKAYCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG
Sbjct: 400  NPNLFKNPKQLGDVVEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEG 459

Query: 1447 SQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQL 1268
             Q++NSNVL YYVAPIVRD+T NSFPQKT +F RV++IL +GFYLCGR+YSFLAFS+NQL
Sbjct: 460  LQRMNSNVLNYYVAPIVRDITSNSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSANQL 519

Query: 1267 RDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNL 1088
            RD+SAWFF+E  NI V D+KSWMGKFT++N+AKC ARMG CFSST+AT+EVP E+VN +L
Sbjct: 520  RDQSAWFFSEERNISVLDVKSWMGKFTNRNIAKCAARMGQCFSSTYATIEVPPEEVNSDL 579

Query: 1087 PDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEF 908
            PDIERNGYVFSDGIG ITPDLA+EVA KL+L  +PPCAYQIR+AGCKGVVACWP K D  
Sbjct: 580  PDIERNGYVFSDGIGIITPDLAREVAEKLKLDIDPPCAYQIRYAGCKGVVACWPGKGDGV 639

Query: 907  RLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKL 728
            RLS+RPSM KFQS HT LEI SWTRFQPGFLNRQII LLS L VPD VF  MQ TMV KL
Sbjct: 640  RLSLRPSMNKFQSNHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDAVFWKMQETMVSKL 699

Query: 727  CHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKT 548
              +  N+D+AFDV+T+SCA+QGN A +ML AGFKP  EPHLRGMLT +RA Q  DL EKT
Sbjct: 700  NQMFVNSDVAFDVLTASCADQGNVAAIMLSAGFKPDREPHLRGMLTCVRAAQLWDLREKT 759

Query: 547  RIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVV 368
            RIFVP GRWLMGC DELG+LEQGQCFIQ S  SLE CF   G  FS  +  LQVIKGTVV
Sbjct: 760  RIFVPSGRWLMGCLDELGMLEQGQCFIQVSNSSLEKCFMKHGAKFSEAEKNLQVIKGTVV 819

Query: 367  VAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDE 188
            +AKNPCLHPGD+R+LEAVD PGLHHL DCLVFPQKG+RPH NEASGSDLDGDLYFVTWDE
Sbjct: 820  IAKNPCLHPGDVRVLEAVDVPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWDE 879

Query: 187  NLVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSD 8
            NL+PPSKRSWIPM Y  AEA+ L RPVNH DI++FF KNMVN+ LG ICN+HVVHADLS+
Sbjct: 880  NLIPPSKRSWIPMQYDAAEAKLLARPVNHQDIIEFFAKNMVNDNLGAICNAHVVHADLSE 939

Query: 7    YG 2
            YG
Sbjct: 940  YG 941


>ref|XP_002308662.1| SILENCING DEFECTIVE 1 family protein [Populus trichocarpa]
            gi|222854638|gb|EEE92185.1| SILENCING DEFECTIVE 1 family
            protein [Populus trichocarpa]
          Length = 1198

 Score = 1134 bits (2932), Expect = 0.0
 Identities = 545/779 (69%), Positives = 634/779 (81%), Gaps = 1/779 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+C+  F++ TAFSFK T+ HAV+KCDFK EF VRDINE++ Y +    ++ 
Sbjct: 160  DFLVDPFDGTCRFCFSRNTAFSFKSTAEHAVIKCDFKVEFLVRDINEIKQYTETSCLVLL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL S+P ++YRTADDDI  +VPFDLLDD+DPWIRTTDFT++  IGRC+SYR+ +PPR G
Sbjct: 220  LQLASAPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTASGAIGRCHSYRVSIPPRHG 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAP-KFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNAA 1799
             KL++A+++LK+ R+       P + R+EPDFG PM DPFFC H KE I+F++LFLVNA 
Sbjct: 280  PKLRKAVDFLKERRVQEEYLRRPIRIRDEPDFGMPMTDPFFCIHHKEGIAFDVLFLVNAV 339

Query: 1798 IHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPK 1619
            +HKGIF+  QLS+ FF+LLR+   EVNVAAL +IY  + PVFD  ++L+  Q  LLKNPK
Sbjct: 340  MHKGIFNQHQLSNDFFDLLRNQPTEVNVAALKHIYPYRRPVFDAYKKLKVAQEWLLKNPK 399

Query: 1618 MIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQ 1439
              K+ K L D AE+RRL+ITPTKAYCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q 
Sbjct: 400  FFKNQKKLDDIAEIRRLVITPTKAYCLPPEVELSNRVLRKYKDVADRFLRVTFMDEGLQT 459

Query: 1438 LNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDR 1259
            +NSN L Y+ APIVR +T  SFPQKT +F RV++IL +GFYLCGR+YSFLAFSSNQLRDR
Sbjct: 460  MNSNALNYFAAPIVRAITSYSFPQKTRIFKRVRSILTEGFYLCGRRYSFLAFSSNQLRDR 519

Query: 1258 SAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDI 1079
            SAWFFAE  NI V  IKSWMGKFT+KN+AKC ARMG CFSST+AT+EVP E+VN +LPDI
Sbjct: 520  SAWFFAEDRNINVMAIKSWMGKFTNKNIAKCAARMGQCFSSTYATIEVPPEEVNSDLPDI 579

Query: 1078 ERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLS 899
            +RNGY FSDGIG ITPDLA+EVA KL+   +PPCAYQIR+AGCKGVVACWPE+ D  RLS
Sbjct: 580  KRNGYDFSDGIGMITPDLAREVAEKLKFDFDPPCAYQIRYAGCKGVVACWPEQGDGIRLS 639

Query: 898  IRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCHI 719
            +R SM KFQS HT+LEI SWTRFQPGFLNRQII LLSAL VPD VF  MQ  MV KL  +
Sbjct: 640  LRSSMNKFQSNHTILEICSWTRFQPGFLNRQIITLLSALNVPDAVFWKMQELMVSKLNQM 699

Query: 718  LENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIF 539
            L ++D+AFDV+T+SCAEQGN A +ML AGFKPQ EPHLRGMLT +RA Q   L EK RIF
Sbjct: 700  LVDSDVAFDVLTASCAEQGNVAAIMLSAGFKPQKEPHLRGMLTCVRAAQLWGLREKARIF 759

Query: 538  VPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVAK 359
            VP GRWLMGC DELGVLEQGQCFIQ S   LENCF   G  FS  K  LQV+KGTVV+AK
Sbjct: 760  VPSGRWLMGCLDELGVLEQGQCFIQVSNSYLENCFVKHGSKFSETKKNLQVVKGTVVIAK 819

Query: 358  NPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLV 179
            NPCLHPGDIRILEAVD PGLHHL DCLVFPQKG+RPHANEASGSDLDGDLYFVTWDENL+
Sbjct: 820  NPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHANEASGSDLDGDLYFVTWDENLI 879

Query: 178  PPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            PPSKRSWIPM Y  AEA++L RPVNH DIV+FF KNM NE LG ICN+HVV ADLS+YG
Sbjct: 880  PPSKRSWIPMQYDAAEAKQLTRPVNHQDIVEFFAKNMANENLGAICNAHVVRADLSEYG 938


>ref|XP_002515520.1| RNA-dependent RNA polymerase, putative [Ricinus communis]
            gi|223545464|gb|EEF46969.1| RNA-dependent RNA polymerase,
            putative [Ricinus communis]
          Length = 1203

 Score = 1116 bits (2887), Expect = 0.0
 Identities = 541/780 (69%), Positives = 620/780 (79%), Gaps = 2/780 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG CK  FT++TAFSFKGT+ HAV++CDFK EF VRDINE++ Y D    ++ 
Sbjct: 160  DFLVDPFDGKCKFCFTRDTAFSFKGTTEHAVIRCDFKLEFLVRDINEIKQYTDTSCLVIL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL S+P ++YRTADDDI   VPFDLLDD+DPWIRTTDFT +  IGRCNSYR+ +PPR G
Sbjct: 220  LQLASAPSVWYRTADDDIEVLVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHG 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKFR--EEPDFGSPMPDPFFCFHPKEKISFELLFLVNA 1802
             KLK A+ +L++ R+   DC         EP++  PM DPFFC H +E + F L+FLVNA
Sbjct: 280  AKLKRALNFLRERRV-QEDCLRRPLHVTAEPEYEMPMSDPFFCIHHEEGVDFNLMFLVNA 338

Query: 1801 AIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNP 1622
             +HKGIF+  QLSD FF+LLR+   +VN+AAL +I S K PVFD  +RL+ VQ  LLKNP
Sbjct: 339  VMHKGIFNQHQLSDSFFDLLRNQPLDVNIAALRHICSYKHPVFDAHKRLKAVQQWLLKNP 398

Query: 1621 KMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQ 1442
            K+ +S K L D  E+RRL ITPT+AYCLPPEVELSNR+LR+Y++ AD+FLRVTFMDEG Q
Sbjct: 399  KLFRSSKQLDDIVEIRRLAITPTRAYCLPPEVELSNRVLRRYKDIADQFLRVTFMDEGLQ 458

Query: 1441 QLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRD 1262
             +N+N LTYY APIVRD+T NSF QKT +F RVK+IL DGFYLCGRKYSFLAFSSNQLRD
Sbjct: 459  TMNANTLTYYCAPIVRDITSNSFSQKTRIFKRVKSILTDGFYLCGRKYSFLAFSSNQLRD 518

Query: 1261 RSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPD 1082
            RSAWFFAE     V  I++WMGKFT++N+AKC ARMG CFSST+ATVEVP  +   +LPD
Sbjct: 519  RSAWFFAEDGKTSVSKIRNWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSAEAILDLPD 578

Query: 1081 IERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRL 902
            IERN Y+FSDGIG ITPDLAKEVA KL+L  NPPCAYQIR+AGCKGVVACWP   D  RL
Sbjct: 579  IERNNYIFSDGIGMITPDLAKEVAEKLKLEVNPPCAYQIRYAGCKGVVACWPAHIDGIRL 638

Query: 901  SIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCH 722
            S+R SM KF S HT LEI SWTRFQPGFLNRQII LLS L VPD +F  MQ  MV KL  
Sbjct: 639  SLRVSMNKFHSNHTTLEICSWTRFQPGFLNRQIITLLSTLDVPDEIFWKMQIVMVSKLNQ 698

Query: 721  ILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRI 542
            +  + D+AFDVVT+SCAEQGNTA +ML AGF P+TEPHL GMLT IRA Q   L EKTRI
Sbjct: 699  MFMDADVAFDVVTASCAEQGNTAAIMLSAGFNPKTEPHLCGMLTCIRAAQLWGLREKTRI 758

Query: 541  FVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVA 362
            FVP GRWLMGC DELGVLE GQCFIQ S PSLE+CF   G  FS +K  LQV+KGTVVVA
Sbjct: 759  FVPSGRWLMGCLDELGVLEHGQCFIQVSNPSLESCFWKHGSRFSESKKKLQVVKGTVVVA 818

Query: 361  KNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENL 182
            KNPCLHPGDIRILEAVD P LHHL DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENL
Sbjct: 819  KNPCLHPGDIRILEAVDAPELHHLHDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENL 878

Query: 181  VPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            +PPSKRSW+PM Y  AEA++L RPVNH DI+DFF KNMVNE LG ICN+HVVHADLS+YG
Sbjct: 879  IPPSKRSWLPMQYDAAEAKQLNRPVNHQDIIDFFAKNMVNENLGAICNAHVVHADLSEYG 938


>ref|XP_007225440.1| hypothetical protein PRUPE_ppa000422mg [Prunus persica]
            gi|462422376|gb|EMJ26639.1| hypothetical protein
            PRUPE_ppa000422mg [Prunus persica]
          Length = 1196

 Score = 1110 bits (2870), Expect = 0.0
 Identities = 545/780 (69%), Positives = 625/780 (80%), Gaps = 2/780 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  FT +TAFSFKGT  HAV+KCDFK EF VR+I E++ Y D    ++ 
Sbjct: 159  DFIVDPFDGTCKFCFTMDTAFSFKGTKKHAVIKCDFKVEFLVREIAEIKQYTDTSYLVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            L+L SSP + YRTADDDI  +VPFDLLDD+DPWIRTTDFT +  IGRCNSYR+ +PPR G
Sbjct: 219  LRLTSSPWVSYRTADDDIDQSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVLIPPRHG 278

Query: 1975 KKLKEAIEYLKKWRI--IPYDCPAPKFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNA 1802
             KLK+A+ YL++ R+  +    P PK ++EPDFG    +PFF    +E ISFE++FLVNA
Sbjct: 279  AKLKKAMNYLRERRVKEVCIKWP-PKIQDEPDFGMSNTEPFFSIQYEEGISFEIMFLVNA 337

Query: 1801 AIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNP 1622
             +HKG  +  QLSD FF LLRS  +E+NVAAL ++ S ++PVFD  ERL+ VQ  LLKNP
Sbjct: 338  VMHKGTVNQHQLSDSFFHLLRSQPKEINVAALKHLCSYRSPVFDACERLKVVQDWLLKNP 397

Query: 1621 KMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQ 1442
            K++K  K L D AEVRRL+ITPTKAYCLPPEVELSNR+LRKY+E ADRFLRVTFMDEG Q
Sbjct: 398  KLVKDPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQ 457

Query: 1441 QLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRD 1262
            ++NSNVL YYVAPIV+++T NSF QKT VF R +TIL DGFYLCGRKY+FLAFSSNQLRD
Sbjct: 458  KINSNVLNYYVAPIVKEITSNSFLQKTNVFKRFRTILNDGFYLCGRKYTFLAFSSNQLRD 517

Query: 1261 RSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPD 1082
            RSAWFFAE  NI VG I SWMGKF +KNVAKC ARMG CFSST+ATVEV   +VN ++PD
Sbjct: 518  RSAWFFAECVNISVGKITSWMGKFNNKNVAKCAARMGQCFSSTYATVEVTSSEVN-DIPD 576

Query: 1081 IERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRL 902
            I+RNGYVFSDGIG ITPDLA EVA KL+L  NPPCAYQIRFAGCKGVVACWP K D FRL
Sbjct: 577  IKRNGYVFSDGIGMITPDLALEVAEKLKLDRNPPCAYQIRFAGCKGVVACWPSKGDGFRL 636

Query: 901  SIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCH 722
            S+R SM KF+SKHT LEI SWTR+QPGFLNRQII LLS L V D +F  MQ  MV KL  
Sbjct: 637  SLRTSMNKFESKHTTLEICSWTRYQPGFLNRQIITLLSTLNVEDEIFWRMQEKMVLKLNQ 696

Query: 721  ILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRI 542
            +L +TD+AFDV+T+SCAEQGN A +ML AGFKPQTEPHLRGMLT I+A Q   L EK RI
Sbjct: 697  MLVDTDVAFDVLTASCAEQGNAAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKARI 756

Query: 541  FVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVA 362
            FV  GRWLMG  DELGVLEQGQCF+Q S P LE+CF+  G  F+  +  LQVIKG VV+A
Sbjct: 757  FVHSGRWLMGVLDELGVLEQGQCFVQVSTPLLESCFAKHGSSFAQIERNLQVIKGHVVIA 816

Query: 361  KNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENL 182
            KNPCLHPGDIRILEAVD PGLHHL DCLVFPQKGDRPH +EASGSDLDGDLYFVTWDENL
Sbjct: 817  KNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGDRPHTDEASGSDLDGDLYFVTWDENL 876

Query: 181  VPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            +PPSK+SW+PM Y PAEA+   RPV   DI+DFFVKNM NE LG ICN+HVVHAD SDYG
Sbjct: 877  IPPSKKSWMPMQYDPAEAKLQGRPVTQQDIIDFFVKNMTNENLGPICNAHVVHADRSDYG 936


>ref|XP_002282647.1| PREDICTED: RNA-dependent RNA polymerase 6 [Vitis vinifera]
          Length = 1197

 Score = 1107 bits (2862), Expect = 0.0
 Identities = 549/782 (70%), Positives = 625/782 (79%), Gaps = 4/782 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  FTK+TAFSFKG   HAV+KC+FK EF VR+INEVR   D  S I+ 
Sbjct: 160  DFLVDPFDGTCKFLFTKDTAFSFKGMPKHAVIKCNFKVEFLVREINEVRQRRDMSSLILL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSP +YYRTADDDI  TVPFDLLDD+DPWIRTTDFT +  IGRCNSYRI +PPR G
Sbjct: 220  LQLSSSPFVYYRTADDDIEETVPFDLLDDDDPWIRTTDFTVSGAIGRCNSYRISIPPRYG 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKF----REEPDFGSPMPDPFFCFHPKEKISFELLFLV 1808
             KLK+A++YL+  R+   +  +PK+    R+EPDFG PM DPFFC   KE I F ++FLV
Sbjct: 280  AKLKKAMDYLRARRVNVLE-DSPKWQLRVRDEPDFGLPMSDPFFCIQHKEGIDFRVMFLV 338

Query: 1807 NAAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLK 1628
            NA +HKGI +  QLSD+FF+LLRS ++++N+AAL +I S + PVFD  +RL+ V   LLK
Sbjct: 339  NAVMHKGIINQHQLSDKFFDLLRSQQKDINIAALKHICSYRHPVFDAYQRLKLVHKWLLK 398

Query: 1627 NPKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEG 1448
            NPK++KS K L D  EVRRL+ITP+KAYCLPPEVELSNR+LR Y+E +DRFLRVTFMDEG
Sbjct: 399  NPKLLKSPKELDDIVEVRRLVITPSKAYCLPPEVELSNRVLRNYKEVSDRFLRVTFMDEG 458

Query: 1447 SQQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQL 1268
             Q +N+NVL YYVAPIV+ +T NSFPQKT VF RVKTIL DGFYLCGRKYSFLAFSSNQL
Sbjct: 459  MQTINANVLNYYVAPIVKVITSNSFPQKTRVFKRVKTILTDGFYLCGRKYSFLAFSSNQL 518

Query: 1267 RDRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNL 1088
            RDRSAWFFAE     V  IKSWMGKFT++NVAKC ARMG CFSST+ATVEVP  +V   L
Sbjct: 519  RDRSAWFFAEDKKTSVRAIKSWMGKFTNRNVAKCAARMGQCFSSTYATVEVPSWEVK-EL 577

Query: 1087 PDIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEF 908
            PDI+RNGY FSDGIGKI PDLA EVA KL+L    P AYQIR+AGCKGVVACWP   D  
Sbjct: 578  PDIKRNGYDFSDGIGKIVPDLAMEVAEKLKL-EGTPSAYQIRYAGCKGVVACWPSDNDGI 636

Query: 907  RLSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKL 728
            RLS RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLSAL VPD +F  MQ +M+ KL
Sbjct: 637  RLSWRPSMNKFLSDHTILEICSWTRFQPGFLNRQIVTLLSALNVPDKIFWKMQESMISKL 696

Query: 727  CHILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKT 548
              +L +TD+AFDV+ +SCAEQGNTA +ML AGFKPQTEPHL+GMLT IRA QF  L EK 
Sbjct: 697  NQMLTDTDVAFDVLIASCAEQGNTAAIMLSAGFKPQTEPHLQGMLTCIRAAQFWGLREKA 756

Query: 547  RIFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVV 368
            RIFVP GRWLMGC DELGVLEQGQCFIQ S PSLENCF   G  FS  K  L+VIKG V 
Sbjct: 757  RIFVPSGRWLMGCLDELGVLEQGQCFIQVSSPSLENCFLKHGSRFSAQK-NLKVIKGIVA 815

Query: 367  VAKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDE 188
            +AKNPCLHPGD+RILEAVD PGL HLVDCLVFPQKGDRPH+NEASGSDLDGDLYFVTW+E
Sbjct: 816  IAKNPCLHPGDVRILEAVDAPGLEHLVDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWEE 875

Query: 187  NLVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSD 8
             L+PPSK+SW PM Y  AEA+ L R V  LDI+DFF KNMVNE LG ICN+HVVHAD S+
Sbjct: 876  TLIPPSKQSWPPMQYDSAEAKALAREVTSLDIIDFFTKNMVNENLGAICNAHVVHADRSE 935

Query: 7    YG 2
            YG
Sbjct: 936  YG 937


>ref|XP_007011871.1| RNA-dependent RNA polymerase 6 [Theobroma cacao]
            gi|508782234|gb|EOY29490.1| RNA-dependent RNA polymerase
            6 [Theobroma cacao]
          Length = 1197

 Score = 1091 bits (2822), Expect = 0.0
 Identities = 535/780 (68%), Positives = 620/780 (79%), Gaps = 2/780 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  F+++TAFSFKGT+ +AV+KCDFK EF VRDINE++ Y +    ++ 
Sbjct: 160  DFLVDPFDGTCKFCFSRDTAFSFKGTTEYAVIKCDFKVEFLVRDINEIKQYTEPSGLVVF 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSP ++YRTADD+I  +VPFDLLDD+D WIRTTDFT +  IGRCN+YR+ + PR G
Sbjct: 220  LQLASSPRVWYRTADDEIEESVPFDLLDDDDQWIRTTDFTPSGAIGRCNTYRVVIRPRHG 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKFR--EEPDFGSPMPDPFFCFHPKEKISFELLFLVNA 1802
             KLK+A++YL++ R+ P D      R  +EPDFG  M DPF+C   KE I FE++FLVNA
Sbjct: 280  AKLKKALDYLREQRV-PMDYVRWPLRISDEPDFGRSMSDPFYCIDYKEGIPFEIMFLVNA 338

Query: 1801 AIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNP 1622
             +HKGIF+  QLS+ FF LLR   REVNVAAL +IYS + PVFD  +RL+TV   LL+NP
Sbjct: 339  VMHKGIFNQHQLSEDFFNLLRDQPREVNVAALKHIYSYRRPVFDAYKRLKTVHDWLLRNP 398

Query: 1621 KMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQ 1442
             + KS K L D  E+RRL+ITPTKA+CL PEVELSNR+LRKY+E ADRFLRVTFMDEG Q
Sbjct: 399  ILFKSPKQLDDIVEIRRLVITPTKAHCLLPEVELSNRVLRKYKEVADRFLRVTFMDEGMQ 458

Query: 1441 QLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRD 1262
             +N+NVLTYY A IVRD+T   F QKT VF RV++IL DGFYLCGRKYSFLAFS+NQLRD
Sbjct: 459  TINANVLTYYAASIVRDVTSTFFSQKTGVFKRVRSILTDGFYLCGRKYSFLAFSANQLRD 518

Query: 1261 RSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPD 1082
             SAWFFAE     V  I  WMGKFT++N+AKC ARMG CFSST+ATVEVP  +VN  LPD
Sbjct: 519  SSAWFFAEDGKTSVLQILRWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSTEVNPFLPD 578

Query: 1081 IERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRL 902
            IERNGYVFSDGIGKITPDLAKEVA KL+L  NPPCAYQIR+AGCKGVVACWPE+ D  RL
Sbjct: 579  IERNGYVFSDGIGKITPDLAKEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEEGDGVRL 638

Query: 901  SIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCH 722
            S+R SM KF S HT LEI SWTRFQPGFLNRQII LLS   VPD VF  MQ TMV KL  
Sbjct: 639  SLRCSMNKFFSDHTTLEICSWTRFQPGFLNRQIITLLSTQYVPDEVFWEMQNTMVSKLNK 698

Query: 721  ILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRI 542
            IL +TD+AF+V+TSSC+EQGN A +ML AGFKPQTEPHLRG+LT +RA Q   L EK RI
Sbjct: 699  ILVDTDVAFEVLTSSCSEQGNAAAIMLSAGFKPQTEPHLRGILTCVRASQLCGLREKARI 758

Query: 541  FVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVA 362
            FVP GRWLMG  DELGVLEQGQCFIQ S PS+ENCF   G  F+  K   +VI+G VV+A
Sbjct: 759  FVPSGRWLMGVLDELGVLEQGQCFIQVSNPSVENCFLKHGSRFAETKKNFEVIQGLVVIA 818

Query: 361  KNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENL 182
            KNPCLHPGDIRILEAVD PGLHHL DCLVFPQKG+RPH NEASGSDLDGDLYFVTW++ L
Sbjct: 819  KNPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEDLL 878

Query: 181  VPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            +PP K+SW PM Y P E +++QR VNH DI+DFF KNMVNE LGTICN+HVVHADLS+YG
Sbjct: 879  IPPGKKSWPPMQYDPGETKEIQREVNHKDIIDFFAKNMVNEHLGTICNAHVVHADLSEYG 938


>ref|XP_004291459.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Fragaria vesca subsp.
            vesca]
          Length = 1197

 Score = 1088 bits (2813), Expect = 0.0
 Identities = 530/779 (68%), Positives = 623/779 (79%), Gaps = 1/779 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  F ++TAFSFKG + HAV+ CDFK EF VR+I E + Y + L  ++ 
Sbjct: 160  DFVVDPFDGTCKFCFRRDTAFSFKGLNKHAVITCDFKAEFQVREIGEFKHYTEPLYHVLL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            L+LVSSP + YRTADDDI  +V FDLLDD+DPWIRTTDFT    IGRCN YR+ +PPR G
Sbjct: 220  LRLVSSPWVSYRTADDDIDQSVLFDLLDDDDPWIRTTDFTPTGAIGRCNYYRVLIPPRHG 279

Query: 1975 KKLKEAIEYLKKWRIIP-YDCPAPKFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNAA 1799
             KLK+A+ YLK+ R+   +    P+ ++EP FG+PM D  F  H ++ ISF++LFLVNA 
Sbjct: 280  AKLKKAMIYLKERRVQELFIKKPPRIQDEPGFGNPMSDALFSIHYQKNISFDILFLVNAV 339

Query: 1798 IHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPK 1619
            +HKGI +  QLS+ FF+LLR+   E+NVAAL ++ S K PVFD ++RL+ VQ  LL+NPK
Sbjct: 340  MHKGILNQHQLSESFFDLLRNQPEEINVAALKHLCSYKHPVFDASKRLKLVQEWLLRNPK 399

Query: 1618 MIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQ 1439
            +IK+ K L D AEVRRL+ITPTKAYCLPPEVELSNR+LRKY+E ADRFLRVTFMDEG Q 
Sbjct: 400  LIKNPKRLDDIAEVRRLVITPTKAYCLPPEVELSNRVLRKYKEVADRFLRVTFMDEGMQT 459

Query: 1438 LNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDR 1259
            +NSNV+  YVAPIV+++T+N+FPQKT V+ R++ IL +GF+LCGRKYSFLAFSSNQLRDR
Sbjct: 460  MNSNVMNSYVAPIVKEITENTFPQKTKVYVRIRAILMNGFHLCGRKYSFLAFSSNQLRDR 519

Query: 1258 SAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDI 1079
            SAWFFAE   I +  IK+WMG+FT++NVAKC ARMG CFSST+ATVEVP  QVN  LPDI
Sbjct: 520  SAWFFAEDKTISIQGIKNWMGRFTNRNVAKCAARMGQCFSSTYATVEVPSTQVNHELPDI 579

Query: 1078 ERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLS 899
            ERNGYVFSDGIG+ITPDLA EVA KL+L  +PP AYQIR+ GCKGVVACWP   D FRLS
Sbjct: 580  ERNGYVFSDGIGRITPDLAMEVAEKLKLDRDPPSAYQIRYGGCKGVVACWPSTGDGFRLS 639

Query: 898  IRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCHI 719
            +R SM KF S HT LEI SWTR QPGFLNRQII LLSAL VPD +F  MQ TMV KL  +
Sbjct: 640  LRRSMNKFASDHTTLEICSWTRLQPGFLNRQIITLLSALNVPDEIFWTMQETMVSKLKQM 699

Query: 718  LENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIF 539
            L +TD+AFDV+T+SCAEQGN+A +ML AGFKPQTEPHLRGMLT I+A Q   L EKTRIF
Sbjct: 700  LVDTDVAFDVLTASCAEQGNSAAIMLSAGFKPQTEPHLRGMLTCIQAAQLWGLREKTRIF 759

Query: 538  VPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVAK 359
            VP GRWLMGC DELGVLEQGQCF+Q S PSLENCF+  G  F      LQVIKG VVVAK
Sbjct: 760  VPSGRWLMGCLDELGVLEQGQCFVQVSTPSLENCFAKHGSRFDQTDKNLQVIKGFVVVAK 819

Query: 358  NPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLV 179
            NPCLHPGDIRILEAVD PGLHHL DCLVFPQKG RPH +EASGSDLDGDLYFVTWDENL+
Sbjct: 820  NPCLHPGDIRILEAVDAPGLHHLHDCLVFPQKGHRPHTDEASGSDLDGDLYFVTWDENLI 879

Query: 178  PPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            PP K+SW PM+Y PAEA+   R V   D+++FFV+NMVNE LG ICN+HVVH+D S+YG
Sbjct: 880  PPRKKSWQPMEYEPAEAKLSGRSVTSQDLIEFFVRNMVNENLGAICNAHVVHSDRSEYG 938


>gb|EXB88201.1| RNA-dependent RNA polymerase 6 [Morus notabilis]
          Length = 1194

 Score = 1081 bits (2796), Expect = 0.0
 Identities = 526/781 (67%), Positives = 614/781 (78%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG CK  FT++TAFSFK  +  A++KCDFK EF VRDINE++ Y D    ++ 
Sbjct: 156  DFLVDPFDGLCKFCFTRDTAFSFKDMAKLAMMKCDFKVEFLVRDINEIKQYTDTSHLVVL 215

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            L L SSP ++YRTADDDI  +VPFDLLDD+DPWIRTTDFT +  IGRCNSYR+ +PPR G
Sbjct: 216  LLLASSPRVWYRTADDDIEVSVPFDLLDDDDPWIRTTDFTPSGAIGRCNSYRVSIPPRHG 275

Query: 1975 KKLKEAIEYLKKWRIIPYDCP---APKFREEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
             KLK+A+ YL++ R+   + P   A + + EPDF  PM DP F  H K  I FE++FL+N
Sbjct: 276  SKLKKAMSYLRERRV--QETPLRKALRIQSEPDFAVPMSDPIFYVHGKHGIPFEIMFLLN 333

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
              +HKGIF+   +SD  F+L R+  RE+N+AAL +I S K PVFD   +L+ VQ  LL+N
Sbjct: 334  VIVHKGIFNQHNISDGLFDLFRNQPREINLAALKHISSYKRPVFDAYAKLKNVQEWLLRN 393

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            PK++K  + L D AEVRRL+ITPT+AYCLPPEVELSNR+LRKY+E +DRFLRVTFMDEG 
Sbjct: 394  PKLLKIPRQLDDIAEVRRLVITPTRAYCLPPEVELSNRVLRKYKEVSDRFLRVTFMDEGM 453

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            Q +N NVLTYY APIV+++T NS  QKT VF RVK++L DGFYLCG++YSFLAFSSNQLR
Sbjct: 454  QTMNLNVLTYYPAPIVKELTSNSTSQKTKVFKRVKSLLTDGFYLCGQRYSFLAFSSNQLR 513

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I V  IK WMG+F ++N+AKC ARMG CFSST+ATVEVP  +VN +L 
Sbjct: 514  DRSAWFFAEDGKITVNGIKKWMGRFNNRNIAKCAARMGQCFSSTYATVEVPLTEVNFDLE 573

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            +IERN YVFSDGIG ITPDLAKEVA KL+L  NPP AYQIR+AGCKGVVACWP K D  R
Sbjct: 574  EIERNTYVFSDGIGMITPDLAKEVAEKLKLDINPPSAYQIRYAGCKGVVACWPPKGDGIR 633

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+R SM KF SKHT+LEI SWTRFQPGFLNRQI+ LLS L V D +F  MQ TM+ KL 
Sbjct: 634  LSLRRSMNKFDSKHTILEICSWTRFQPGFLNRQIVTLLSTLNVRDEIFWKMQETMLFKLN 693

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             +L + D+AF+V+T+SC EQGN   +ML AGFKPQ+EPHL+GMLT IRA Q   L EK R
Sbjct: 694  QMLTDADVAFNVLTASCPEQGNVGAIMLSAGFKPQSEPHLQGMLTCIRAAQLWGLREKAR 753

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            IFVP GRWLMGC DELGVLEQGQCFIQ S PSLENCFS  G  FS  K  L+VIKG VV+
Sbjct: 754  IFVPLGRWLMGCLDELGVLEQGQCFIQVSTPSLENCFSKHGSRFSETKNNLEVIKGFVVI 813

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGDIRILEAVD PGLHHL DCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN
Sbjct: 814  AKNPCLHPGDIRILEAVDVPGLHHLYDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 873

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            L+PPSK+SW PM Y PA+ + L R V   DI+DFF +NMVNE LG ICN+HVVHADLSDY
Sbjct: 874  LIPPSKKSWNPMQYDPAKPRTLPRDVTQKDIIDFFSRNMVNESLGAICNAHVVHADLSDY 933

Query: 4    G 2
            G
Sbjct: 934  G 934


>ref|XP_006483358.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X3 [Citrus
            sinensis]
          Length = 1025

 Score = 1076 bits (2782), Expect = 0.0
 Identities = 532/780 (68%), Positives = 618/780 (79%), Gaps = 2/780 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  FT++ AF+ K ++ HAV+KC+FK EF VR+IN V+ Y +     + 
Sbjct: 160  DFLVDPFDGTCKFCFTRDIAFALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAIL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSP ++YRTADDDI   VPFD+LDD+DPWIRTTDFT +  IGRCNSYRI +  R  
Sbjct: 220  LQLASSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHR 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAP-KFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNAA 1799
             KL + I YL + R+       P   REEPDF  PM DPFFC H +E ISFE++FLVNA 
Sbjct: 280  GKLSKVITYLGERRVQVDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAV 339

Query: 1798 IHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPK 1619
            +HKGI +  QLSD FF+LLR   REVNVAAL +IYS K PVFD  +RL+ VQ  LLK+P+
Sbjct: 340  MHKGIINQHQLSDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPE 399

Query: 1618 MIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQ 1439
            + K  K + D  EVRRL+ITPTKAYCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q 
Sbjct: 400  LYKGPKQIDDIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQT 459

Query: 1438 LNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDR 1259
            +N+NVL+Y++APIVRD+T NSF QKT VF RV++IL  GFYLCGRK+SFLAFSS+QLRD 
Sbjct: 460  MNANVLSYFIAPIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDC 519

Query: 1258 SAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDI 1079
            SAWFF+E     V DIK WMG+FTDKN+AKC ARMG CFSST+ATVEVP  +V+  LPDI
Sbjct: 520  SAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDI 579

Query: 1078 ERNGYVFSDGIGKITPDLAKEVAAKLQLTSN-PPCAYQIRFAGCKGVVACWPEKTDEFRL 902
            +RNGYVFSDGIGKITPDLA EVA KL+L  N PPCAYQIR+AGCKGVVACWP K D  R+
Sbjct: 580  KRNGYVFSDGIGKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRM 639

Query: 901  SIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCH 722
            S+R SM KFQS HT LEI SWTRFQPGFLNRQII LLS L VPD +F  MQ +M+ KL  
Sbjct: 640  SLRESMNKFQSHHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQ 699

Query: 721  ILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRI 542
            +L ++D+AF+V+T++CAEQGNTA +ML AGF PQTEPHLRGMLT IRA Q   L EK RI
Sbjct: 700  MLVDSDVAFEVLTAACAEQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARI 759

Query: 541  FVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVA 362
            FVP GRWLMGC DELGVLE GQCFIQ S P L NCFS  G  F+  K  LQVIKG VV+A
Sbjct: 760  FVPAGRWLMGCLDELGVLEGGQCFIQVSEPFLGNCFSKHGSRFAETKK-LQVIKGFVVIA 818

Query: 361  KNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENL 182
            KNPCLHPGDIRILEAVD+P LHHL DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENL
Sbjct: 819  KNPCLHPGDIRILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENL 878

Query: 181  VPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            +PPSK+SW PM+Y+ AEA+ L RPV+  DI++FF K+MVNE LGTICN+HVVHAD S+YG
Sbjct: 879  IPPSKKSWPPMEYNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYG 938


>ref|XP_006483356.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Citrus
            sinensis] gi|568859664|ref|XP_006483357.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Citrus
            sinensis]
          Length = 1197

 Score = 1076 bits (2782), Expect = 0.0
 Identities = 532/780 (68%), Positives = 618/780 (79%), Gaps = 2/780 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  FT++ AF+ K ++ HAV+KC+FK EF VR+IN V+ Y +     + 
Sbjct: 160  DFLVDPFDGTCKFCFTRDIAFALKSSTEHAVIKCEFKVEFLVREINLVKQYSEFSCVAIL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSP ++YRTADDDI   VPFD+LDD+DPWIRTTDFT +  IGRCNSYRI +  R  
Sbjct: 220  LQLASSPRVWYRTADDDILVLVPFDMLDDDDPWIRTTDFTPSGAIGRCNSYRISISSRHR 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAP-KFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNAA 1799
             KL + I YL + R+       P   REEPDF  PM DPFFC H +E ISFE++FLVNA 
Sbjct: 280  GKLSKVITYLGERRVQVDSLSRPITIREEPDFEVPMSDPFFCIHYEEGISFEIMFLVNAV 339

Query: 1798 IHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPK 1619
            +HKGI +  QLSD FF+LLR   REVNVAAL +IYS K PVFD  +RL+ VQ  LLK+P+
Sbjct: 340  MHKGIINQHQLSDSFFDLLRGQSREVNVAALKHIYSYKWPVFDACKRLKLVQEWLLKDPE 399

Query: 1618 MIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQ 1439
            + K  K + D  EVRRL+ITPTKAYCLPPEVELSNR+LRKY++ ADRFLRVTFMDEG Q 
Sbjct: 400  LYKGPKQIDDIVEVRRLVITPTKAYCLPPEVELSNRVLRKYKDLADRFLRVTFMDEGLQT 459

Query: 1438 LNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDR 1259
            +N+NVL+Y++APIVRD+T NSF QKT VF RV++IL  GFYLCGRK+SFLAFSS+QLRD 
Sbjct: 460  MNANVLSYFIAPIVRDITLNSFSQKTRVFKRVRSILSGGFYLCGRKFSFLAFSSSQLRDC 519

Query: 1258 SAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDI 1079
            SAWFF+E     V DIK WMG+FTDKN+AKC ARMG CFSST+ATVEVP  +V+  LPDI
Sbjct: 520  SAWFFSEDGKTSVLDIKKWMGRFTDKNIAKCAARMGQCFSSTYATVEVPPTEVDPELPDI 579

Query: 1078 ERNGYVFSDGIGKITPDLAKEVAAKLQLTSN-PPCAYQIRFAGCKGVVACWPEKTDEFRL 902
            +RNGYVFSDGIGKITPDLA EVA KL+L  N PPCAYQIR+AGCKGVVACWP K D  R+
Sbjct: 580  KRNGYVFSDGIGKITPDLAMEVAQKLKLDVNPPPCAYQIRYAGCKGVVACWPAKGDGIRM 639

Query: 901  SIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCH 722
            S+R SM KFQS HT LEI SWTRFQPGFLNRQII LLS L VPD +F  MQ +M+ KL  
Sbjct: 640  SLRESMNKFQSHHTTLEICSWTRFQPGFLNRQIITLLSTLNVPDEMFWSMQDSMLSKLNQ 699

Query: 721  ILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRI 542
            +L ++D+AF+V+T++CAEQGNTA +ML AGF PQTEPHLRGMLT IRA Q   L EK RI
Sbjct: 700  MLVDSDVAFEVLTAACAEQGNTAAIMLSAGFNPQTEPHLRGMLTCIRAAQLWGLREKARI 759

Query: 541  FVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVA 362
            FVP GRWLMGC DELGVLE GQCFIQ S P L NCFS  G  F+  K  LQVIKG VV+A
Sbjct: 760  FVPAGRWLMGCLDELGVLEGGQCFIQVSEPFLGNCFSKHGSRFAETKK-LQVIKGFVVIA 818

Query: 361  KNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENL 182
            KNPCLHPGDIRILEAVD+P LHHL DCLVFPQKGDRPH NEASGSDLDGDLYFVTWDENL
Sbjct: 819  KNPCLHPGDIRILEAVDHPELHHLYDCLVFPQKGDRPHTNEASGSDLDGDLYFVTWDENL 878

Query: 181  VPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            +PPSK+SW PM+Y+ AEA+ L RPV+  DI++FF K+MVNE LGTICN+HVVHAD S+YG
Sbjct: 879  IPPSKKSWPPMEYNAAEAKTLTRPVDQRDIIEFFAKHMVNENLGTICNAHVVHADHSEYG 938


>gb|AAU21242.1| putative RNA-dependent RNA polymerase SDE1 [Nicotiana benthamiana]
          Length = 1197

 Score = 1075 bits (2779), Expect = 0.0
 Identities = 521/781 (66%), Positives = 619/781 (79%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DFF+DPF+G+CKI FTK+TAFSF+G + HA++KC+FK EF VR+INE++ + D  S ++ 
Sbjct: 159  DFFVDPFNGACKILFTKDTAFSFRGEAKHAIIKCNFKIEFMVREINEIKKFKDFTSLVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSPL++YRTADDDI  +V FDLLDD+D WIRTTD T +  IGRCN+YRI + PR G
Sbjct: 219  LQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNG 278

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKF---REEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
               ++A+ Y    R+   +    K    R+EPDFG  M DPFFCF   E ISF+++FLVN
Sbjct: 279  PSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVN 337

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
            A +HKGI +  Q+++ FF LLRSH+ EVN+AAL +++S K PV D  ++L  +Q  LLKN
Sbjct: 338  AVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKN 397

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            PK+++    L D  EVRRL+ITPTKAYCLPP VELSNR+LR Y+  ADRFLRVTFMDEG 
Sbjct: 398  PKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGM 457

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL  GF+LCGRKYSFLAFS+NQLR
Sbjct: 458  RNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLR 517

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I+V  I SWMG+F+++NVAKC ARMG CFSST+ATVEVP  +VN  LP
Sbjct: 518  DRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELP 577

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            DIERNGYVFSDGIG I+ DLA EVA KL L+ NPP AYQIR+AGCKGVVACWP K D   
Sbjct: 578  DIERNGYVFSDGIGMISADLALEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIL 637

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F  MQ  M+  L 
Sbjct: 638  LSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLN 697

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q  DL  K R
Sbjct: 698  KMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKAR 757

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            IFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF   GP FS  K  LQV+KG VV+
Sbjct: 758  IFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVI 817

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGD+RILEAVD PGLHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN
Sbjct: 818  AKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDEN 877

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            L+PPSK+SWIPM+Y PAE ++L R VNH+DI+DFF KNMV E LG ICN+HVVHADLS++
Sbjct: 878  LIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEF 937

Query: 4    G 2
            G
Sbjct: 938  G 938


>gb|ACA13601.1| RNA-dependent RNA polymerase [Nicotiana attenuata]
          Length = 1197

 Score = 1071 bits (2769), Expect = 0.0
 Identities = 519/781 (66%), Positives = 618/781 (79%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPF+G+CKI FTK+TAFSF+G + HA++KC+FK EF VR+INE++   D  S ++ 
Sbjct: 159  DFLVDPFNGACKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSPL++YRTADDDI  +V FDLLDD+D WIRTTD T +  IGRCN+YRI + PR G
Sbjct: 219  LQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNG 278

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKF---REEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
               ++A+ Y    R+   +    K    R+EPDFG  M DPFFCF   E ISF+++FLVN
Sbjct: 279  PSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVN 337

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
            A +HKGI +  Q+++ FF LLRSH+ EVN+AAL +++S K PV D  ++L  ++  LLKN
Sbjct: 338  AVLHKGIVNQHQMTNEFFYLLRSHQEEVNLAALKHMFSYKWPVNDAIQKLVGIRKWLLKN 397

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            PK+++    L D  EVRRL+ITPTKAYCLPP VELSNR+LR Y+  ADRFLRVTFMDEG 
Sbjct: 398  PKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGM 457

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL  GF+LCGRKYSFLAFS+NQLR
Sbjct: 458  RNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLR 517

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I+V  I SWMG+F+++NVAKC ARMG CFSST+ATVEVP  +VN  LP
Sbjct: 518  DRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELP 577

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            DIERNGYVFSDGIG I+ DLA EVA KL L+ NPP AYQIR+AGCKGVVACWP K D  R
Sbjct: 578  DIERNGYVFSDGIGMISADLAVEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIR 637

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F  MQ  M+  L 
Sbjct: 638  LSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLD 697

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q  DL  K R
Sbjct: 698  KMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKAR 757

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            IFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF   GP FS  K  LQV+KG VV+
Sbjct: 758  IFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFIKHGPKFSDIKKNLQVVKGLVVI 817

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGD+RILEAVD PGLHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN
Sbjct: 818  AKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDEN 877

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            L+PPSK+SWIPM+Y PAE +++ R VNH+DI+DFF KNMV E LG ICN+HVVHADLS++
Sbjct: 878  LIPPSKKSWIPMNYEPAEVKQMGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEF 937

Query: 4    G 2
            G
Sbjct: 938  G 938


>gb|ADI52625.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1064 bits (2751), Expect = 0.0
 Identities = 518/781 (66%), Positives = 612/781 (78%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPF+G+CKI FTK+TAFSF+G + HA++KC+FK EF VR+INE++   D  S ++ 
Sbjct: 159  DFLVDPFNGTCKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
             QL SSPL++YRTADDDI  +V FDLLDD+D WIRTTD T +  IGRCN+YRI + PR G
Sbjct: 219  FQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNG 278

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKF---REEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
               ++A+ Y    R+   +    K    ++EPDFG  M DPFFCF   E ISF +LFLVN
Sbjct: 279  PSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFRVLFLVN 337

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
            A +HKGI +  Q+++ FF LLRSH+ EVN AAL +++S K PV D  ++L  +Q  LLKN
Sbjct: 338  AVLHKGIVNQHQMANEFFYLLRSHQEEVNSAALKHMFSYKWPVNDAIQKLAGIQKWLLKN 397

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            PK++     L D  EVRRL+ITPTKAYCLPP VELSNR+LR Y+  ADRFLRVTFMDEG 
Sbjct: 398  PKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGM 457

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL  GF+LCGRKYSFLAFS+NQLR
Sbjct: 458  RNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLR 517

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I+V  I SWMG+F+++NVAKC ARMG CFSST+ATVEVP  +VN  LP
Sbjct: 518  DRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELP 577

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            DIERNGYVFSDGIG I+ DLA EVA KL L+ NPP AYQIR+AGCKGVVACWP K D  R
Sbjct: 578  DIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIR 637

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F  MQ  M+  L 
Sbjct: 638  LSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLD 697

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q  DL  K R
Sbjct: 698  KMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKAR 757

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            IFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF   GP FS  K  LQV+KG VV+
Sbjct: 758  IFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVI 817

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGD+RILEAVD P L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN
Sbjct: 818  AKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDEN 877

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            L+PPSK+SWIPM+Y PAE ++L R VNH+DI+DFF KNMV E LG ICN+HVVHADLS++
Sbjct: 878  LIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEF 937

Query: 4    G 2
            G
Sbjct: 938  G 938


>dbj|BAF96019.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1064 bits (2751), Expect = 0.0
 Identities = 518/781 (66%), Positives = 614/781 (78%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DFF+DPF+G+CKI FTK+TAFSF+G + HA++KC+FK EF VR+INE++   D  S ++ 
Sbjct: 159  DFFVDPFNGTCKILFTKDTAFSFRGEARHAIIKCNFKIEFMVREINEIKKCKDFTSLVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSPL++YRTADDDI  +V FDLLDD+D WIRTTD T +  IGRCN+YRI + PR G
Sbjct: 219  LQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNG 278

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKF---REEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
               ++A+ Y    R+   +    K    ++EPDFG  M DPFFCF   E ISF+++FLVN
Sbjct: 279  PSFEKAMAYFSFHRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVN 337

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
            A +HKGI +  Q+++ FF LLRS + EVN AAL +++S K PV D  ++L  +Q  LLKN
Sbjct: 338  AVLHKGIVNQHQMTNEFFYLLRSRQEEVNSAALKHMFSYKWPVNDAIQKLVGIQKWLLKN 397

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            PK++     L D  EVRRL+ITPTKAYCLPP VELSNR+LR Y+  ADRFLRVTFMDEG 
Sbjct: 398  PKLLDRTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGM 457

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL  GF+LCGRKYSFLAFS+NQLR
Sbjct: 458  RNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLR 517

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I+V  I SWMG+F+++NVAKC ARMG CFSST+ATVEVP  +VN  LP
Sbjct: 518  DRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSREVNSELP 577

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            DIERNGYVFSDGIG I+ DLA EVA KL L+ NPP AYQIR+AGCKGVVACWP K D  R
Sbjct: 578  DIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPSAYQIRYAGCKGVVACWPTKNDGIR 637

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F  MQ  M+  L 
Sbjct: 638  LSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLD 697

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q  DL  K R
Sbjct: 698  KMLVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKAR 757

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            IFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF   GP FS  K  LQV+KG VV+
Sbjct: 758  IFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKQNLQVVKGLVVI 817

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGD+RILEAVD P L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN
Sbjct: 818  AKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDEN 877

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            L+PPSK+SWIPM+Y PAE ++L R VNH+DI+DFF KNMV E LG ICN+HVVHADLS++
Sbjct: 878  LIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEF 937

Query: 4    G 2
            G
Sbjct: 938  G 938


>gb|ACO72600.1| RNA-dependent RNA polymerase 6 [Nicotiana glutinosa]
          Length = 1197

 Score = 1062 bits (2747), Expect = 0.0
 Identities = 516/781 (66%), Positives = 613/781 (78%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPF+G+CKI FTK+T FSF+G + HA++KC+FK EF VR+INE++   D +S ++ 
Sbjct: 159  DFLVDPFNGTCKILFTKDTVFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFMSLVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSPL++YRTADDDI  +V FDLLDD+D WIRTTD T +  IGRCN+YRI + PR G
Sbjct: 219  LQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNG 278

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKF---REEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
               ++A+ Y    R+   +    K    R+EPDFG  M DPFFCF   E ISF++LFL N
Sbjct: 279  PSFEKAMAYFSFHRVPMVEMCNRKMLRVRDEPDFGVSMSDPFFCFQ-NEGISFKVLFLAN 337

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
            A +HKGI +  Q+ + FF LLRSH+ EVN+AAL +++S K PV D  ++L  +Q  LLKN
Sbjct: 338  AVLHKGIVNQHQMINEFFYLLRSHQEEVNLAALKHMFSYKWPVNDAIQKLAGIQKWLLKN 397

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            PK+++    L D  EVRRL+ITPTKAYCLPP VELSNR+LR Y+  ADRFLRVTFMDEG 
Sbjct: 398  PKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGM 457

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL  GF+LCGRKYSFLAFS+NQLR
Sbjct: 458  RNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSKGFHLCGRKYSFLAFSANQLR 517

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I+V  I SWMG+F+++NVAKC ARMG CFSST+ATVEVP  +VN  LP
Sbjct: 518  DRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELP 577

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            DIERNGYVFSDGIG I+ DLA EVA KL L+ NPP AYQIR+AGCKGVVACWP K D  R
Sbjct: 578  DIERNGYVFSDGIGMISADLAIEVAEKLHLSVNPPAAYQIRYAGCKGVVACWPTKNDGIR 637

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F  MQ  M+  L 
Sbjct: 638  LSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMIAGLD 697

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q  DL  K R
Sbjct: 698  KMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKAR 757

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            IFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF   G  FS  K  LQV+KG VV+
Sbjct: 758  IFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGSKFSDIKKNLQVVKGLVVI 817

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGD+RILEAVD P L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN
Sbjct: 818  AKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDEN 877

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            ++PPSK+SWIPM+Y PAE ++L R VNH+DI+DFF KNMV E LG ICN+HVVHADLS++
Sbjct: 878  IIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEF 937

Query: 4    G 2
            G
Sbjct: 938  G 938


>gb|ADG57590.1| RNA-dependent RNA polymerase 6 [Gossypium hirsutum]
            gi|295885034|gb|ADG57592.1| RNA-dependent RNA polymerase
            6 [Gossypium hirsutum]
          Length = 1196

 Score = 1061 bits (2745), Expect = 0.0
 Identities = 526/779 (67%), Positives = 615/779 (78%), Gaps = 1/779 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            +F +DPFD +CK  F+++TAFSFKGT+ HAV+KCDFK EF VR+INEV+ Y +   +++ 
Sbjct: 160  EFLVDPFDCTCKFCFSRDTAFSFKGTNEHAVIKCDFKVEFLVREINEVKQYSEPTGFVVL 219

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSP ++YRTADDD   TVPF LLDD+D WIRTTDFT++  IGRCN+YR+ V PR G
Sbjct: 220  LQLASSPWVWYRTADDDFEKTVPFGLLDDDDQWIRTTDFTASGAIGRCNTYRVLVRPRHG 279

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAP-KFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNAA 1799
             KLK+A++YL++ R+   D  +  + R+EPDFG  M D F+  + KE I FE++FLVNA 
Sbjct: 280  LKLKKAMDYLRERRVPVEDLRSQLRIRDEPDFGRSMSDHFYYIY-KEGIPFEIMFLVNAV 338

Query: 1798 IHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNPK 1619
            +HKGIF+  QLS  FF LLR+   EVNVAAL +IYS + PV+D  ERL+ V   LLKNPK
Sbjct: 339  LHKGIFNQHQLSMDFFRLLRNQSMEVNVAALKHIYSYRHPVYDAYERLKDVHDWLLKNPK 398

Query: 1618 MIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQQ 1439
            + KS   L D  E+RRL+ITPTKAYCL PEVELSNR+LRKY++ ADRFLRVTFMDEG Q 
Sbjct: 399  LFKSPPQLDDIVEIRRLVITPTKAYCLLPEVELSNRVLRKYKDVADRFLRVTFMDEGMQI 458

Query: 1438 LNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRDR 1259
            +N+NVLTYY A IVRD+T  SF QKT VF RVK+IL DGFYLCGRKYSFLAFS+NQLRDR
Sbjct: 459  MNANVLTYYNAAIVRDVTSTSFSQKTGVFKRVKSILTDGFYLCGRKYSFLAFSANQLRDR 518

Query: 1258 SAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPDI 1079
            +AWFFAE   I V  I  WMGKFT++N+AKC ARMG CFSST+ATVEVP  QVN +LPDI
Sbjct: 519  AAWFFAEDGKINVLQIIGWMGKFTNRNIAKCAARMGQCFSSTYATVEVPSGQVNMHLPDI 578

Query: 1078 ERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRLS 899
            +RNGY FSDGIGKITPDLA EVA KL+L  NPPCAYQIR+AGCKGVVACWPE+ D  RLS
Sbjct: 579  KRNGYDFSDGIGKITPDLAMEVAQKLKLDLNPPCAYQIRYAGCKGVVACWPEEGDRIRLS 638

Query: 898  IRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCHI 719
            +R SMIKF S HT LEI SWTRFQPGFLNRQII LLS LGVPD VF  MQ +MV KL  +
Sbjct: 639  LRSSMIKFFSHHTTLEICSWTRFQPGFLNRQIITLLSTLGVPDEVFWGMQNSMVSKLDKV 698

Query: 718  LENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRIF 539
            L +TD AF+VV SSC EQG+T  +ML AGFKPQTEPHLRGMLT +RA Q   L EK+RIF
Sbjct: 699  LVDTDAAFEVVISSCGEQGHTPAIMLSAGFKPQTEPHLRGMLTCVRASQLWGLREKSRIF 758

Query: 538  VPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVAK 359
            +  GRWLMG  DELGVLEQGQCFIQ S PSL+NCF   G  F+  K   +VIKG VV+AK
Sbjct: 759  IHSGRWLMGVLDELGVLEQGQCFIQVSNPSLQNCFLKHGSRFAETKKNFEVIKGLVVIAK 818

Query: 358  NPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENLV 179
            NPCLHPGDIRILEAVD PGLHHL DCLVFPQKG+RPH NEASGSDLDGDLYFVTW+E L+
Sbjct: 819  NPCLHPGDIRILEAVDAPGLHHLYDCLVFPQKGERPHTNEASGSDLDGDLYFVTWEEALI 878

Query: 178  PPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            PPSK+S  PM Y     ++L R V H DI++FF KNMVNE LG+ICN+HVVH+DLS++G
Sbjct: 879  PPSKKSSQPMQYDLDAPRELNRSVTHKDIIEFFSKNMVNEHLGSICNAHVVHSDLSEHG 937


>ref|XP_004160762.1| PREDICTED: RNA-dependent RNA polymerase 6-like [Cucumis sativus]
          Length = 1197

 Score = 1056 bits (2731), Expect = 0.0
 Identities = 505/780 (64%), Positives = 616/780 (78%), Gaps = 2/780 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  FTK+TAFSFK  + H  LKCD+K EF VRDIN++  Y D   +++ 
Sbjct: 159  DFLVDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSP ++YRTADDDI   VP+DLLDD+DPWIRTTDFT +  IGRCN++R+ VPPR G
Sbjct: 219  LQLTSSPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYG 278

Query: 1975 KKLKEAIEYLKKWRI--IPYDCPAPKFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNA 1802
             KL  A+ YLK+ R+  +  + P PK   EPD+G  M D FFC   K+ ISFE+LFLVNA
Sbjct: 279  IKLNNAMNYLKEQRVHQVSLNRP-PKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNA 337

Query: 1801 AIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNP 1622
             +HKGI +  Q+SDRFF+LLR+   EVN+AAL++I++ + PV D  ++L+ VQ  LLKNP
Sbjct: 338  VMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNP 397

Query: 1621 KMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQ 1442
             ++K  K L D  E+RRL+ITP+KAYC PPEVELSNR+LR+Y++ ADRFLRVTFMDEG +
Sbjct: 398  TLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMK 457

Query: 1441 QLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRD 1262
            ++NS+V TYYVAPIV+++T +SFPQKT +F R+K ILK GF+LCGRKYSFLA+SSNQLRD
Sbjct: 458  KINSHVYTYYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRD 517

Query: 1261 RSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPD 1082
            +SAWFFAE  +I V  I  WMGKFT+KNVAKC AR+G CFSST+AT+EVP   VN +L D
Sbjct: 518  QSAWFFAECKSISVDAILGWMGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSD 577

Query: 1081 IERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRL 902
            +ERNGYVFSDGIG ITPDLA+EVA KL++  +PPCAYQIR+AG KGVVA WP K D  RL
Sbjct: 578  VERNGYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRL 637

Query: 901  SIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCH 722
            ++RPSM KF+S H +LEI SWTRFQPGFLNRQII LLS L VPD +F  MQ TM+ KL  
Sbjct: 638  ALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDR 697

Query: 721  ILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRI 542
            ++ +TD+AF+V+T+SCAEQGN A +ML AGF+P+TEPHLRGML  IRA Q   L EK RI
Sbjct: 698  MITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARI 757

Query: 541  FVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVA 362
            FV +GRW MGCFDE GVL++GQCFIQ S P LE CFS  G  F+  K  L V++GTVV+A
Sbjct: 758  FVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIA 817

Query: 361  KNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENL 182
            KNPCLHPGD+RILEAVD P LHHL DCLVFP+ G+RPH NEASGSDLDGDLYF TWD NL
Sbjct: 818  KNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNL 877

Query: 181  VPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            +PPSK+SW PM+Y+PAE + LQR +   DI++FF KNM+NE LGTICN+HVVHAD S +G
Sbjct: 878  IPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHG 937


>ref|NP_001267634.1| RNA-dependent RNA polymerase 6-like [Cucumis sativus]
            gi|316989907|gb|ADU77019.1| RNA-dependent RNA polymerase
            6 [Cucumis sativus]
          Length = 1197

 Score = 1055 bits (2728), Expect = 0.0
 Identities = 504/780 (64%), Positives = 616/780 (78%), Gaps = 2/780 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPFDG+CK  FTK+TAFSFK  + H  LKCD+K EF VRDIN++  Y D   +++ 
Sbjct: 159  DFLVDPFDGTCKFCFTKDTAFSFKDNNKHTFLKCDYKMEFIVRDINQITRYTDTSCYVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL +SP ++YRTADDDI   VP+DLLDD+DPWIRTTDFT +  IGRCN++R+ VPPR G
Sbjct: 219  LQLTASPCIWYRTADDDIAKLVPYDLLDDDDPWIRTTDFTISGAIGRCNTFRVSVPPRYG 278

Query: 1975 KKLKEAIEYLKKWRI--IPYDCPAPKFREEPDFGSPMPDPFFCFHPKEKISFELLFLVNA 1802
             KL  A+ YLK+ R+  +  + P PK   EPD+G  M D FFC   K+ ISFE+LFLVNA
Sbjct: 279  IKLNNAMNYLKEQRVHQVSLNRP-PKILNEPDYGVQMTDHFFCILYKKDISFEILFLVNA 337

Query: 1801 AIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKNP 1622
             +HKGI +  Q+SDRFF+LLR+   EVN+AAL++I++ + PV D  ++L+ VQ  LLKNP
Sbjct: 338  VMHKGIINQHQMSDRFFDLLRNQPNEVNLAALSHIHAFRRPVLDACKKLKLVQEWLLKNP 397

Query: 1621 KMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGSQ 1442
             ++K  K L D  E+RRL+ITP+KAYC PPEVELSNR+LR+Y++ ADRFLRVTFMDEG +
Sbjct: 398  TLLKRSKELVDIVEIRRLVITPSKAYCFPPEVELSNRVLRRYKDVADRFLRVTFMDEGMK 457

Query: 1441 QLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLRD 1262
            ++NS+V TYYVAPIV+++T +SFPQKT +F R+K ILK GF+LCGRKYSFLA+SSNQLRD
Sbjct: 458  KINSHVYTYYVAPIVKEITSSSFPQKTKIFARMKHILKHGFHLCGRKYSFLAYSSNQLRD 517

Query: 1261 RSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLPD 1082
            +SAWFFAE  +I V  I  WMGKFT+KNVAKC AR+G CFSST+AT+EVP   VN +L D
Sbjct: 518  QSAWFFAECKSISVDAILGWMGKFTNKNVAKCAARIGQCFSSTYATIEVPRNMVNHDLSD 577

Query: 1081 IERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFRL 902
            +ERNGYVFSDGIG ITPDLA+EVA KL++  +PPCAYQIR+AG KGVVA WP K D  RL
Sbjct: 578  VERNGYVFSDGIGTITPDLAQEVADKLKMDGSPPCAYQIRYAGYKGVVATWPSKKDGIRL 637

Query: 901  SIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLCH 722
            ++RPSM KF+S H +LEI SWTRFQPGFLNRQII LLS L VPD +F  MQ TM+ KL  
Sbjct: 638  ALRPSMNKFESNHRILEICSWTRFQPGFLNRQIITLLSTLSVPDEIFWSMQETMISKLDR 697

Query: 721  ILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTRI 542
            ++ +TD+AF+V+T+SCAEQGN A +ML AGF+P+TEPHLRGML  IRA Q   L EK RI
Sbjct: 698  MITDTDVAFEVLTASCAEQGNAAAIMLSAGFEPRTEPHLRGMLMCIRAAQLWGLREKARI 757

Query: 541  FVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVVA 362
            FV +GRW MGCFDE GVL++GQCFIQ S P LE CFS  G  F+  K  L V++GTVV+A
Sbjct: 758  FVTEGRWCMGCFDESGVLQEGQCFIQVSTPLLEKCFSKHGSLFAETKNNLTVVRGTVVIA 817

Query: 361  KNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDENL 182
            KNPCLHPGD+RILEAVD P LHHL DCLVFP+ G+RPH NEASGSDLDGDLYF TWD NL
Sbjct: 818  KNPCLHPGDVRILEAVDAPELHHLYDCLVFPRNGERPHTNEASGSDLDGDLYFTTWDGNL 877

Query: 181  VPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDYG 2
            +PPSK+SW PM+Y+PAE + LQR +   DI++FF KNM+NE LGTICN+HVVHAD S +G
Sbjct: 878  IPPSKKSWPPMEYAPAEVKTLQRKITRWDIMEFFAKNMINESLGTICNAHVVHADRSKHG 937


>emb|CAR47810.1| RNA-dependent RNA polymerase 6 [Nicotiana tabacum]
          Length = 1197

 Score = 1054 bits (2725), Expect = 0.0
 Identities = 514/781 (65%), Positives = 611/781 (78%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            DF +DPF+G+CKI FTK+TAFSF+G + HA++KC+FK EF VR+INE++   D  S ++ 
Sbjct: 159  DFLVDPFNGTCKILFTKDTAFSFRGEARHAIIKCNFKIEFLVREINEIKKCKDFTSLVIL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
             QL SSPL++YRTADDDI  +V FDLLDD+D WIRTTD T +  IGRCN+YRI + PR G
Sbjct: 219  FQLASSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITGSGAIGRCNTYRISIRPRNG 278

Query: 1975 KKLKEAIEYLKKWRIIPYDCPAPKF---REEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
               ++A+ Y    R+   +    K    ++EPDFG  M DPFFCF   E ISF+++FLVN
Sbjct: 279  PSFEKAMAYFSFRRVPMVEMCNRKMLRVKDEPDFGVSMSDPFFCFQ-NEGISFKVMFLVN 337

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
            A +HKGI +  Q+++ FF LLRS + EVN+AAL +++S K PV D  ++L  +Q  LLKN
Sbjct: 338  AVLHKGIVNQHQMTNEFFYLLRSRQEEVNLAALKHMFSYKWPVNDAIQKLVGIQKWLLKN 397

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            PK+++    L D  EVRRL+ITPTKAYCLPP VELSNR+LR Y+  ADRFLRVTFMDEG 
Sbjct: 398  PKLLERTGELDDIVEVRRLVITPTKAYCLPPTVELSNRVLRNYKHVADRFLRVTFMDEGM 457

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            + LN NVLTYY A IVR++T NS PQ+T +F RVK+IL  GF+LCGRKYSFLAFS+NQLR
Sbjct: 458  RNLNRNVLTYYAATIVREITSNSNPQRTAIFQRVKSILSRGFHLCGRKYSFLAFSANQLR 517

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I+V  I SWMG+F+++NVAKC ARMG CFSST+ATVEVP  +VN  LP
Sbjct: 518  DRSAWFFAEDPKIRVPGIISWMGRFSNRNVAKCAARMGQCFSSTYATVEVPSSEVNSELP 577

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            DIERNGYVFSDGIG I+ DLA EVA KL L  NPP AYQIR+AG KGVVACWP K D   
Sbjct: 578  DIERNGYVFSDGIGMISADLAIEVAEKLHLNVNPPSAYQIRYAGYKGVVACWPTKNDGIL 637

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+RPSM KF S HT+LEI SWTRFQPGFLNRQI+ LLS+L V D +F  MQ  M+  L 
Sbjct: 638  LSLRPSMKKFDSNHTILEICSWTRFQPGFLNRQIVTLLSSLDVKDGIFWEMQKEMISGLD 697

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             +L ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML++IRA Q  DL  K R
Sbjct: 698  KMLVDSDVAFDVITASCAEAGNTAALMLSAGFKPQSEPHLRGMLSSIRASQLGDLRNKAR 757

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            IFVP GRWLMGC DELG LEQGQCFIQ S PSLENCF   GP FS  K  LQV+KG VV+
Sbjct: 758  IFVPSGRWLMGCLDELGELEQGQCFIQVSSPSLENCFVKHGPKFSDIKKNLQVVKGLVVI 817

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGD+RILEAVD P L HL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN
Sbjct: 818  AKNPCLHPGDVRILEAVDVPSLSHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDEN 877

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            L+PPSK+SWIPM+Y PAE ++L R VNH+DI+DFF KNMV E LG ICN+HVVHADLS++
Sbjct: 878  LIPPSKKSWIPMNYEPAEVKQLGRQVNHMDIIDFFSKNMVQESLGEICNAHVVHADLSEF 937

Query: 4    G 2
            G
Sbjct: 938  G 938


>ref|XP_006346784.1| PREDICTED: RNA-dependent RNA polymerase 6-like isoform X1 [Solanum
            tuberosum] gi|565360032|ref|XP_006346785.1| PREDICTED:
            RNA-dependent RNA polymerase 6-like isoform X2 [Solanum
            tuberosum]
          Length = 1198

 Score = 1053 bits (2723), Expect = 0.0
 Identities = 514/781 (65%), Positives = 613/781 (78%), Gaps = 3/781 (0%)
 Frame = -1

Query: 2335 DFFIDPFDGSCKINFTKETAFSFKGTSLHAVLKCDFKTEFFVRDINEVRSYMDQLSWIME 2156
            +F +DPF+G+CKI FT++TAF FKG   HAV+KC+FK EF +R+INE+    D  S ++ 
Sbjct: 159  NFLVDPFNGTCKILFTRDTAFCFKGEGKHAVIKCNFKIEFLLREINEINECKDFASLVLL 218

Query: 2155 LQLVSSPLLYYRTADDDIHATVPFDLLDDEDPWIRTTDFTSAKVIGRCNSYRIFVPPRQG 1976
            LQL SSPL++YRTADDDI  +V FDLLDD+D WIRTTD T +  IGR N+YRI + PR G
Sbjct: 219  LQLTSSPLVFYRTADDDIEESVAFDLLDDDDQWIRTTDITCSGAIGRFNTYRISIRPRNG 278

Query: 1975 KKLKEAIEYLKKWRIIPYDC---PAPKFREEPDFGSPMPDPFFCFHPKEKISFELLFLVN 1805
              LK+A+ Y ++ R+   +       + R+EPDFG  + +PFFCF   E ISF++LFLVN
Sbjct: 279  PSLKKAMNYFRESRVPVVEQGNRQMLRVRDEPDFGVSLSEPFFCFQNHEGISFKVLFLVN 338

Query: 1804 AAIHKGIFSHFQLSDRFFELLRSHEREVNVAALTYIYSGKTPVFDPAERLRTVQIRLLKN 1625
            A + KGI +  Q++  FF LLR H+  VN+AAL +I+S K PV D  ++L +VQ  L KN
Sbjct: 339  AVLQKGIVNQHQMTAEFFSLLRKHQEGVNLAALKHIFSYKRPVNDAIQKLASVQKWLFKN 398

Query: 1624 PKMIKSFKGLGDSAEVRRLIITPTKAYCLPPEVELSNRILRKYREFADRFLRVTFMDEGS 1445
            P +++    L D  EVRRL+ITPTKAYCLPP VELSNR+LRKY+  +DRFLRVTFMDEG 
Sbjct: 399  PNLLERTGQLDDVVEVRRLVITPTKAYCLPPTVELSNRVLRKYKHVSDRFLRVTFMDEGM 458

Query: 1444 QQLNSNVLTYYVAPIVRDMTKNSFPQKTLVFNRVKTILKDGFYLCGRKYSFLAFSSNQLR 1265
            + LN NVLTYY A IVR++T +S PQ+T +F RVK+IL  GFYLCGR+YSFLAFS+NQLR
Sbjct: 459  RNLNRNVLTYYAATIVREITSSSNPQRTGIFQRVKSILSKGFYLCGRRYSFLAFSANQLR 518

Query: 1264 DRSAWFFAEGANIKVGDIKSWMGKFTDKNVAKCTARMGMCFSSTFATVEVPFEQVNGNLP 1085
            DRSAWFFAE   I+V +I +WMGKF ++NVAKC ARMG CFSST+ATVEV   +VN  LP
Sbjct: 519  DRSAWFFAEAPEIRVPNIINWMGKFGNRNVAKCAARMGQCFSSTYATVEVLPSEVNSELP 578

Query: 1084 DIERNGYVFSDGIGKITPDLAKEVAAKLQLTSNPPCAYQIRFAGCKGVVACWPEKTDEFR 905
            DIERNGYVFSDGIG ++ DL+ EVAAKLQL+ NPPCAYQIR+AGCKGVVACWP + D  R
Sbjct: 579  DIERNGYVFSDGIGMMSADLSIEVAAKLQLSVNPPCAYQIRYAGCKGVVACWPAEKDGIR 638

Query: 904  LSIRPSMIKFQSKHTVLEIVSWTRFQPGFLNRQIIILLSALGVPDTVFSLMQATMVHKLC 725
            LS+RPSM KF S HT+LEI SWTR QPGFLNRQII LLS+L V D +F  MQ  M+ KL 
Sbjct: 639  LSLRPSMKKFDSNHTILEICSWTRLQPGFLNRQIITLLSSLEVKDEMFWEMQKEMLSKLD 698

Query: 724  HILENTDIAFDVVTSSCAEQGNTAGMMLGAGFKPQTEPHLRGMLTAIRAGQFRDLLEKTR 545
             IL ++D+AFDV+T+SCAE GNTA +ML AGFKPQ+EPHLRGML +IRA Q  DL  KTR
Sbjct: 699  KILVDSDVAFDVITASCAEAGNTAAIMLSAGFKPQSEPHLRGMLASIRAAQLGDLRNKTR 758

Query: 544  IFVPQGRWLMGCFDELGVLEQGQCFIQSSIPSLENCFSDQGPGFSGNKMGLQVIKGTVVV 365
            +FVP GRWLMGC DEL  LEQGQCFIQ S PSLE CF   GP FS  K  LQVIKG VV+
Sbjct: 759  MFVPSGRWLMGCLDELRKLEQGQCFIQVSSPSLETCFVKHGPKFSEIKKNLQVIKGLVVI 818

Query: 364  AKNPCLHPGDIRILEAVDNPGLHHLVDCLVFPQKGDRPHANEASGSDLDGDLYFVTWDEN 185
            AKNPCLHPGD+RILEAVD PGLHHL DCLVFPQKGDRPH+NEASGSDLDGDLYFVTWDEN
Sbjct: 819  AKNPCLHPGDVRILEAVDVPGLHHLYDCLVFPQKGDRPHSNEASGSDLDGDLYFVTWDEN 878

Query: 184  LVPPSKRSWIPMDYSPAEAQKLQRPVNHLDIVDFFVKNMVNEKLGTICNSHVVHADLSDY 5
            L+PPSK+SW+PMDY+PAEA++L R V H DI+DFF KNMV E LG ICN+HVVHADLS++
Sbjct: 879  LIPPSKKSWMPMDYAPAEAKQLGRQVQHTDIIDFFSKNMVQESLGEICNAHVVHADLSEF 938

Query: 4    G 2
            G
Sbjct: 939  G 939