BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00006604
         (627 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABK26380.1| unknown [Picea sitchensis]                             240   3e-61
ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, I...   236   3e-60
ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, ...   236   4e-60
dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa s...   235   7e-60
gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indi...   235   7e-60
ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, ...   235   9e-60
ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, ...   229   7e-58
ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, I...   225   7e-57
ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III ...   225   7e-57
gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus...   224   2e-56
ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, I...   223   4e-56
ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citr...   223   5e-56
ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [S...   222   6e-56
ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [S...   221   1e-55
ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, I...   220   3e-55
gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indi...   220   3e-55
ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group] g...   219   4e-55
gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subun...   219   7e-55
ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, I...   219   7e-55
ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cac...   216   3e-54

>gb|ABK26380.1| unknown [Picea sitchensis]
          Length = 145

 Score =  240 bits (612), Expect = 3e-61
 Identities = 118/145 (81%), Positives = 128/145 (88%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           MVELLFEDIFTV  +DPDGKKFDKVSRIEARSEQFDM+M LDVN +VYP+  G+KF + L
Sbjct: 1   MVELLFEDIFTVTRIDPDGKKFDKVSRIEARSEQFDMYMLLDVNIDVYPVSVGEKFAVAL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           A TL+LDGTPD GYF QGGRKSLADK+EYVM+GKLY + EEGSG NVK EI ASFGGLLM
Sbjct: 61  APTLNLDGTPDNGYFIQGGRKSLADKYEYVMYGKLYNLSEEGSGANVKVEINASFGGLLM 120

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
           LLKGDPSNA NFELDQRLFLLMRKV
Sbjct: 121 LLKGDPSNAGNFELDQRLFLLMRKV 145


>ref|XP_004234478.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like isoform 1 [Solanum lycopersicum]
           gi|460377396|ref|XP_004234479.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           isoform 2 [Solanum lycopersicum]
          Length = 145

 Score =  236 bits (603), Expect = 3e-60
 Identities = 116/145 (80%), Positives = 129/145 (88%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           MVE LFEDIFTV   DPDGKKFD+V+RIEARSEQFDMFM LDVNTE+YP+R  DKF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDVNTEIYPMRVKDKFMMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           ASTL+LDGTPDTGYF QG +KSLADKFEYVMHGKLYRI EEGSG +VKA+I+ SFGGLLM
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
            L+GDPS AA FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145


>ref|XP_006343291.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Solanum tuberosum]
          Length = 145

 Score =  236 bits (602), Expect = 4e-60
 Identities = 115/145 (79%), Positives = 129/145 (88%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           MVE LFEDIFTV   DPDGKKFD+V+RIEARSEQFDMFM LD+NTE+YP+R  DKF MVL
Sbjct: 1   MVETLFEDIFTVTQKDPDGKKFDRVNRIEARSEQFDMFMLLDINTEIYPMRVKDKFMMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           ASTL+LDGTPDTGYF QG +KSLADKFEYVMHGKLYRI EEGSG +VKA+I+ SFGGLLM
Sbjct: 61  ASTLNLDGTPDTGYFIQGNKKSLADKFEYVMHGKLYRISEEGSGKHVKADIFVSFGGLLM 120

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
            L+GDPS AA FELDQ++FLL+RKV
Sbjct: 121 QLRGDPSIAAKFELDQKIFLLIRKV 145


>dbj|BAD54456.1| putative RNA polymerase I, II and III 16.5 kDa subunit [Oryza
           sativa Japonica Group]
          Length = 396

 Score =  235 bits (600), Expect = 7e-60
 Identities = 116/147 (78%), Positives = 132/147 (89%), Gaps = 1/147 (0%)
 Frame = +1

Query: 112 KMVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMV 291
           KMVE LFEDIFTV  +DPDGKKFD+VSRIEARSEQFDM+M LDV TEVYP+R GD+FTMV
Sbjct: 250 KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 309

Query: 292 LASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEE-GSGINVKAEIYASFGGL 468
           LA TL+LDGTPDTG++TQ GRK+LADKF+YVMHGKLY+I E+  SG   K EIYASFGGL
Sbjct: 310 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 369

Query: 469 LMLLKGDPSNAANFELDQRLFLLMRKV 549
           LM+LKGDPS+AA+FELDQRLFLL+RKV
Sbjct: 370 LMMLKGDPSSAASFELDQRLFLLIRKV 396


>gb|EAZ02226.1| hypothetical protein OsI_24321 [Oryza sativa Indica Group]
           gi|125598367|gb|EAZ38147.1| hypothetical protein
           OsJ_22498 [Oryza sativa Japonica Group]
          Length = 191

 Score =  235 bits (600), Expect = 7e-60
 Identities = 116/147 (78%), Positives = 132/147 (89%), Gaps = 1/147 (0%)
 Frame = +1

Query: 112 KMVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMV 291
           KMVE LFEDIFTV  +DPDGKKFD+VSRIEARSEQFDM+M LDV TEVYP+R GD+FTMV
Sbjct: 45  KMVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRAGDRFTMV 104

Query: 292 LASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEE-GSGINVKAEIYASFGGL 468
           LA TL+LDGTPDTG++TQ GRK+LADKF+YVMHGKLY+I E+  SG   K EIYASFGGL
Sbjct: 105 LAPTLNLDGTPDTGFYTQAGRKTLADKFDYVMHGKLYKISEDSSSGQATKVEIYASFGGL 164

Query: 469 LMLLKGDPSNAANFELDQRLFLLMRKV 549
           LM+LKGDPS+AA+FELDQRLFLL+RKV
Sbjct: 165 LMMLKGDPSSAASFELDQRLFLLIRKV 191


>ref|XP_006656427.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like isoform X1 [Oryza brachyantha]
           gi|573948243|ref|XP_006656428.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X2
           [Oryza brachyantha] gi|573948245|ref|XP_006656429.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X3 [Oryza brachyantha]
           gi|573948247|ref|XP_006656430.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like isoform X4
           [Oryza brachyantha] gi|573948249|ref|XP_006656431.1|
           PREDICTED: DNA-directed RNA polymerases II, IV and V
           subunit 8B-like isoform X5 [Oryza brachyantha]
          Length = 146

 Score =  235 bits (599), Expect = 9e-60
 Identities = 116/146 (79%), Positives = 130/146 (89%), Gaps = 1/146 (0%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           MVE LFEDIFTV  +DPDGKKFD+VSRIEARSEQFDM+M LDV TEVYP+R GDKFTMVL
Sbjct: 1   MVEHLFEDIFTVTRLDPDGKKFDRVSRIEARSEQFDMYMQLDVATEVYPMRPGDKFTMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN-VKAEIYASFGGLL 471
           A TL+LDGTPD G++TQ GRK+LADK++YVMHGKLY+I E+GSG    K EIYASFGGLL
Sbjct: 61  APTLNLDGTPDIGFYTQAGRKTLADKYDYVMHGKLYKISEDGSGGQATKVEIYASFGGLL 120

Query: 472 MLLKGDPSNAANFELDQRLFLLMRKV 549
           M+LKGDPS AANFELDQRLFLL+RKV
Sbjct: 121 MMLKGDPSTAANFELDQRLFLLIRKV 146


>ref|XP_006665034.1| PREDICTED: DNA-directed RNA polymerases II, IV and V subunit
           8B-like [Oryza brachyantha]
          Length = 147

 Score =  229 bits (583), Expect = 7e-58
 Identities = 112/147 (76%), Positives = 128/147 (87%), Gaps = 2/147 (1%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M E LFEDIFTV  +DPDGKKFD+VSRIEAR+EQ +++M LDV T+VYP+  GDKFTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARNEQLNVYMQLDVATDVYPMHPGDKFTMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGE--EGSGINVKAEIYASFGGL 468
             TL+LDGTPDTG+FTQ GRK+LADK+EYVMHGKLY+I E  E SG N K E+YASFGGL
Sbjct: 61  VPTLNLDGTPDTGFFTQAGRKTLADKYEYVMHGKLYKISEDKETSGQNAKVEMYASFGGL 120

Query: 469 LMLLKGDPSNAANFELDQRLFLLMRKV 549
           LM+LKGDPS+AANFELDQRLFLLMRKV
Sbjct: 121 LMMLKGDPSSAANFELDQRLFLLMRKV 147


>ref|XP_003580476.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 146

 Score =  225 bits (574), Expect = 7e-57
 Identities = 112/146 (76%), Positives = 125/146 (85%), Gaps = 1/146 (0%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M E LFEDIF VN +DPDGKKFD+V+RIEARSEQF M+M LDV T VYP+  GDKFTMVL
Sbjct: 1   MAEHLFEDIFVVNRIDPDGKKFDRVNRIEARSEQFHMYMQLDVATYVYPMHAGDKFTMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN-VKAEIYASFGGLL 471
           A TL+LDGTPDTGY+TQ GRK+LADK++YVMHGKLY+I E+ SG    K E YASFGGLL
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVETYASFGGLL 120

Query: 472 MLLKGDPSNAANFELDQRLFLLMRKV 549
           MLLKGDPS+AAN ELDQRLFLLMRKV
Sbjct: 121 MLLKGDPSSAANLELDQRLFLLMRKV 146


>ref|XP_002530308.1| DNA-directed RNA polymerases I, II, and III 17.1 kDa polypeptide,
           putative [Ricinus communis] gi|223530164|gb|EEF32075.1|
           DNA-directed RNA polymerases I, II, and III 17.1 kDa
           polypeptide, putative [Ricinus communis]
          Length = 146

 Score =  225 bits (574), Expect = 7e-57
 Identities = 106/142 (74%), Positives = 126/142 (88%)
 Frame = +1

Query: 124 LLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLAST 303
           +LFEDIF V+ +DPDGKKFDKVSRIEA S+  DMFMHLDVNTE+YP+  GDKFTM LA T
Sbjct: 5   VLFEDIFVVDKLDPDGKKFDKVSRIEAHSQNCDMFMHLDVNTEIYPMAVGDKFTMALAHT 64

Query: 304 LSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLK 483
           L+LDGTPDTGY+TQG RK+LADK+EY+M+GKLY+I EEGSG  VKAE+  S+GGLLMLL+
Sbjct: 65  LNLDGTPDTGYYTQGARKTLADKYEYIMNGKLYKISEEGSGKAVKAEMLVSYGGLLMLLR 124

Query: 484 GDPSNAANFELDQRLFLLMRKV 549
           GDPS+ ++FELDQRLFLLMRK+
Sbjct: 125 GDPSHVSHFELDQRLFLLMRKL 146


>gb|EYU21804.1| hypothetical protein MIMGU_mgv1a015806mg [Mimulus guttatus]
          Length = 145

 Score =  224 bits (570), Expect = 2e-56
 Identities = 109/145 (75%), Positives = 124/145 (85%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           MVE LFEDIF V+ +DPDGKKFD+VSRI ARSEQFDM M LD+NTE+YP+RTGDKF MVL
Sbjct: 1   MVETLFEDIFRVDELDPDGKKFDRVSRISARSEQFDMLMFLDINTEIYPMRTGDKFMMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           ASTL+LDGTPD+GYF  G +KSLADKF+YVM GKLYRI EE     VKA+I+ SFGGLLM
Sbjct: 61  ASTLNLDGTPDSGYFAPGNKKSLADKFDYVMQGKLYRISEESREKQVKADIFVSFGGLLM 120

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
            LKGDPS AA FELDQ+LF+L+RKV
Sbjct: 121 QLKGDPSIAARFELDQKLFILIRKV 145


>ref|XP_002274171.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3 isoform 1 [Vitis vinifera]
           gi|359478220|ref|XP_003632088.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3 isoform 2
           [Vitis vinifera] gi|296084252|emb|CBI24640.3| unnamed
           protein product [Vitis vinifera]
          Length = 145

 Score =  223 bits (568), Expect = 4e-56
 Identities = 108/145 (74%), Positives = 121/145 (83%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M   LF DIF V  +DPDGKKFDKVSRIEA+SEQ DM+M LDVNTE+YP+  G+KF M L
Sbjct: 1   MENTLFGDIFKVIQIDPDGKKFDKVSRIEAQSEQLDMYMQLDVNTEIYPMHAGEKFAMSL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           ASTL LDGTPDTGY+TQ GRKSLADKFEYVMHGKLY+I EEGSG NVK  IY SFGGLLM
Sbjct: 61  ASTLDLDGTPDTGYYTQAGRKSLADKFEYVMHGKLYKISEEGSGPNVKGVIYVSFGGLLM 120

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
           +L GDP+N A  +LDQR+FLL+RKV
Sbjct: 121 MLSGDPANTAKLDLDQRVFLLIRKV 145


>ref|XP_006442881.1| hypothetical protein CICLE_v10022723mg [Citrus clementina]
           gi|568850174|ref|XP_006478800.1| PREDICTED: DNA-directed
           RNA polymerases II, IV and V subunit 8B-like [Citrus
           sinensis] gi|557545143|gb|ESR56121.1| hypothetical
           protein CICLE_v10022723mg [Citrus clementina]
          Length = 146

 Score =  223 bits (567), Expect = 5e-56
 Identities = 104/142 (73%), Positives = 126/142 (88%)
 Frame = +1

Query: 124 LLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLAST 303
           +LFEDIF V  +DPDGKKFDKVSRIEA S+  DM+M LDVN+E+YP+R GDKFTM LA T
Sbjct: 5   VLFEDIFVVEKIDPDGKKFDKVSRIEAHSQNCDMYMLLDVNSELYPMRVGDKFTMALAHT 64

Query: 304 LSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLK 483
           L+LDGTPDTGY+T G RK+LADK+EY+MHGKL++IG+EGSG ++KAEIY S+GGLLM+LK
Sbjct: 65  LNLDGTPDTGYYTPGARKTLADKYEYIMHGKLFKIGDEGSGKSLKAEIYVSYGGLLMMLK 124

Query: 484 GDPSNAANFELDQRLFLLMRKV 549
           GDPS  ++FELDQRLFLLMRK+
Sbjct: 125 GDPSYVSHFELDQRLFLLMRKL 146


>ref|XP_002466106.1| hypothetical protein SORBIDRAFT_01g001330 [Sorghum bicolor]
           gi|241919960|gb|EER93104.1| hypothetical protein
           SORBIDRAFT_01g001330 [Sorghum bicolor]
          Length = 145

 Score =  222 bits (566), Expect = 6e-56
 Identities = 109/145 (75%), Positives = 123/145 (84%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M E LFED F V+ +DPDGKKFDKVSR+EARSEQ  M+M LDV T+VYPLR G+KF MVL
Sbjct: 1   MSEHLFEDTFIVSRLDPDGKKFDKVSRVEARSEQLGMYMQLDVATDVYPLRAGEKFNMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           A TL+LDGTPDTGY+TQ GRK+LAD +EYVM GKLY+I E+ S  N K EIYASFGGLLM
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMQGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
           LL+GDPS AA+FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_002463525.1| hypothetical protein SORBIDRAFT_01g001420 [Sorghum bicolor]
           gi|241917379|gb|EER90523.1| hypothetical protein
           SORBIDRAFT_01g001420 [Sorghum bicolor]
          Length = 145

 Score =  221 bits (563), Expect = 1e-55
 Identities = 107/145 (73%), Positives = 123/145 (84%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M E LFED F VN +DPDGKKFD+VSR+EARSEQ  M+M LDV T+VYP++  +KF MVL
Sbjct: 1   MSEHLFEDTFVVNRLDPDGKKFDRVSRVEARSEQLAMYMQLDVATDVYPMQPNEKFNMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           A TL+LDGTPDTGY+TQ GRK+LAD +EYVMHGKLY+I E+ S  N K EIYASFGGLLM
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADNYEYVMHGKLYKISEDTSSQNAKVEIYASFGGLLM 120

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
           LL+GDPS AA+FELDQRLFLLMRKV
Sbjct: 121 LLRGDPSTAASFELDQRLFLLMRKV 145


>ref|XP_003563485.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Brachypodium distachyon]
          Length = 144

 Score =  220 bits (560), Expect = 3e-55
 Identities = 111/146 (76%), Positives = 126/146 (86%), Gaps = 1/146 (0%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M E LFEDIF V+ +DPDGKKFD+V+RIEARSEQ  M+M LDV T+VYP+  GDKFTMVL
Sbjct: 1   MAEHLFEDIFVVSRIDPDGKKFDRVNRIEARSEQ--MYMQLDVATDVYPMHAGDKFTMVL 58

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN-VKAEIYASFGGLL 471
           A TL+LDGTPDTGY+TQ GRK+LADK++YVMHGKLY+I E+ SG    K EIYASFGGLL
Sbjct: 59  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDSSGGQAAKVEIYASFGGLL 118

Query: 472 MLLKGDPSNAANFELDQRLFLLMRKV 549
           MLLKGDPS+AAN ELDQRLFLLMRKV
Sbjct: 119 MLLKGDPSSAANLELDQRLFLLMRKV 144


>gb|EEC76521.1| hypothetical protein OsI_14307 [Oryza sativa Indica Group]
          Length = 215

 Score =  220 bits (560), Expect = 3e-55
 Identities = 108/151 (71%), Positives = 127/151 (84%), Gaps = 3/151 (1%)
 Frame = +1

Query: 106 QEKMVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFT 285
           Q  M E LFEDIFTV  +DPDGKKFD+VSRIEARS+QFDM+M LDV T+VYP+  GD+FT
Sbjct: 65  QGGMAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFT 124

Query: 286 MVLASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN---VKAEIYAS 456
           MVL  TL+LDGTPD+ +FTQ GRK+LADK+EYVMHGKLY+I E+    +    K E+YAS
Sbjct: 125 MVLVPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYAS 184

Query: 457 FGGLLMLLKGDPSNAANFELDQRLFLLMRKV 549
           FGGLL++LKGDPS+AANFELDQRLFLLMRKV
Sbjct: 185 FGGLLVMLKGDPSSAANFELDQRLFLLMRKV 215


>ref|NP_001051880.1| Os03g0845700 [Oryza sativa Japonica Group]
           gi|29244685|gb|AAO73277.1| putative RNA polymerase
           [Oryza sativa Japonica Group] gi|41469638|gb|AAS07361.1|
           putative RNA polymerase [Oryza sativa Japonica Group]
           gi|108712076|gb|ABF99871.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|108712077|gb|ABF99872.1| RNA polymerase Rpb8 family
           protein, expressed [Oryza sativa Japonica Group]
           gi|113550351|dbj|BAF13794.1| Os03g0845700 [Oryza sativa
           Japonica Group] gi|125588624|gb|EAZ29288.1| hypothetical
           protein OsJ_13351 [Oryza sativa Japonica Group]
           gi|215692970|dbj|BAG88390.1| unnamed protein product
           [Oryza sativa Japonica Group]
          Length = 148

 Score =  219 bits (559), Expect = 4e-55
 Identities = 107/148 (72%), Positives = 126/148 (85%), Gaps = 3/148 (2%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M E LFEDIFTV  +DPDGKKFD+VSRIEARS+QFDM+M LDV T+VYP+  GD+FTMVL
Sbjct: 1   MAEFLFEDIFTVTRLDPDGKKFDRVSRIEARSDQFDMYMQLDVATDVYPMHPGDRFTMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN---VKAEIYASFGG 465
             TL+LDGTPD+ +FTQ GRK+LADK+EYVMHGKLY+I E+    +    K E+YASFGG
Sbjct: 61  VPTLNLDGTPDSAFFTQAGRKTLADKYEYVMHGKLYKISEDKDTSDQNAKKVEMYASFGG 120

Query: 466 LLMLLKGDPSNAANFELDQRLFLLMRKV 549
           LL++LKGDPS+AANFELDQRLFLLMRKV
Sbjct: 121 LLVMLKGDPSSAANFELDQRLFLLMRKV 148


>gb|EMT09070.1| DNA-directed RNA polymerases I, II, and III subunit rpabc3
           [Aegilops tauschii]
          Length = 220

 Score =  219 bits (557), Expect = 7e-55
 Identities = 107/148 (72%), Positives = 126/148 (85%), Gaps = 3/148 (2%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           M E LFEDIF V  +DPDGKKFD+V+RIEARSEQ +M+M LD+ T+VYP+  GDKFTMVL
Sbjct: 1   MAEHLFEDIFHVTRIDPDGKKFDRVNRIEARSEQLEMYMQLDIATDVYPMHMGDKFTMVL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGIN---VKAEIYASFGG 465
           A TL+LDGTPDTGY+TQ GRK+LADK++YVMHGKLY+I E+ S  +    K EIYASFGG
Sbjct: 61  APTLNLDGTPDTGYYTQAGRKTLADKYDYVMHGKLYKISEDNSSKDKGPTKVEIYASFGG 120

Query: 466 LLMLLKGDPSNAANFELDQRLFLLMRKV 549
           LLMLLKGDPS+AAN ELDQ+LFLL+RKV
Sbjct: 121 LLMLLKGDPSSAANLELDQKLFLLIRKV 148


>ref|XP_004152137.1| PREDICTED: DNA-directed RNA polymerases I, II, and III subunit
           rpabc3-like [Cucumis sativus]
           gi|449484745|ref|XP_004156968.1| PREDICTED: DNA-directed
           RNA polymerases I, II, and III subunit rpabc3-like
           [Cucumis sativus]
          Length = 144

 Score =  219 bits (557), Expect = 7e-55
 Identities = 106/145 (73%), Positives = 127/145 (87%)
 Frame = +1

Query: 115 MVELLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVL 294
           MVELLF+DIF +  ++PDGKKFDKV+RIEA+SE+FDMFMHLD+N+E+YPL+ G+KF+M L
Sbjct: 1   MVELLFDDIFKIERLNPDGKKFDKVTRIEAKSEKFDMFMHLDINSEIYPLKEGEKFSMAL 60

Query: 295 ASTLSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLM 474
           A TL+LDGTPDTGYF QG RKSLAD++EYVM GKL+RI  E SG   KAEI ASFGGLLM
Sbjct: 61  APTLNLDGTPDTGYFLQGNRKSLADRYEYVMQGKLFRI-SESSGHGGKAEIDASFGGLLM 119

Query: 475 LLKGDPSNAANFELDQRLFLLMRKV 549
           +LKGDPS+ + FELDQRLFLL+RKV
Sbjct: 120 MLKGDPSHCSKFELDQRLFLLIRKV 144


>ref|XP_007022260.1| RNA polymerase Rpb8 isoform 1 [Theobroma cacao]
           gi|508721888|gb|EOY13785.1| RNA polymerase Rpb8 isoform
           1 [Theobroma cacao]
          Length = 145

 Score =  216 bits (551), Expect = 3e-54
 Identities = 101/142 (71%), Positives = 124/142 (87%)
 Frame = +1

Query: 124 LLFEDIFTVNNMDPDGKKFDKVSRIEARSEQFDMFMHLDVNTEVYPLRTGDKFTMVLAST 303
           + FEDIF V+ +DPDGKKFDKV+RIEARS+  DMFMHLDVN+E+YP+  GDKFTM LA T
Sbjct: 5   IFFEDIFVVDKLDPDGKKFDKVTRIEARSQNCDMFMHLDVNSEIYPMHVGDKFTMALAHT 64

Query: 304 LSLDGTPDTGYFTQGGRKSLADKFEYVMHGKLYRIGEEGSGINVKAEIYASFGGLLMLLK 483
           L+LDGTPDTGY+T  GRKSLADK+EYVMHGKLY++ ++GSG  +KAEIY S+GGLLM+L+
Sbjct: 65  LNLDGTPDTGYYTP-GRKSLADKYEYVMHGKLYKVSDDGSGKGLKAEIYVSYGGLLMMLR 123

Query: 484 GDPSNAANFELDQRLFLLMRKV 549
           G+ S+ + FELDQRLFLLMRK+
Sbjct: 124 GEASHVSQFELDQRLFLLMRKL 145