BLASTX nr result
ID: Papaver25_contig00005873
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00005873
(817 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containi... 432 e-119
gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis] 429 e-118
ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containi... 427 e-117
ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Popu... 426 e-117
ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3... 426 e-117
ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2... 426 e-117
ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1... 426 e-117
ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prun... 425 e-116
ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis... 422 e-115
ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containi... 421 e-115
ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arab... 421 e-115
ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutr... 420 e-115
ref|XP_002511477.1| pentatricopeptide repeat-containing protein,... 418 e-114
ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containi... 416 e-114
ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Caps... 416 e-114
ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citr... 414 e-113
ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containi... 411 e-112
ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containi... 411 e-112
ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containi... 410 e-112
ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containi... 408 e-111
>ref|XP_002280557.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic [Vitis vinifera]
Length = 869
Score = 432 bits (1112), Expect = e-119
Identities = 207/236 (87%), Positives = 223/236 (94%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
RAKPKEL+LGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LV
Sbjct: 57 RAKPKELVLGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 116
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIG+LGREGLL+KC E+FDEMP+HG
Sbjct: 117 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGVLGREGLLEKCQEIFDEMPSHG 176
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
V+ SVFSFTALINAYGRNGQYK SLELLDRMK ER++PSILTYNT+I++C RGGLDWE L
Sbjct: 177 VAPSVFSFTALINAYGRNGQYKSSLELLDRMKKERVSPSILTYNTVINSCARGGLDWEEL 236
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFAQMRH+GIQ D+VTYNTLL ACA R LGDEAEMVFR MNE GI+PDITT++Y
Sbjct: 237 LGLFAQMRHEGIQADIVTYNTLLSACARRGLGDEAEMVFRTMNEGGILPDITTYSY 292
Score = 100 bits (248), Expect = 8e-19
Identities = 63/214 (29%), Positives = 103/214 (48%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY VET KL+ L + + ++ + + + ++ + AQ G + ++ +F+ M
Sbjct: 290 YSYLVETF-GKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKEAMGVFRQM 348
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L GR G D ++F EM + ++ LIN +G G
Sbjct: 349 QGA-GCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATYNILINVFGEGGY 407
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E + P++ TY +I AC +GGL E + M G+ P Y
Sbjct: 408 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH-EDAKKILLHMNEKGVVPSSKAYT 466
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +EA + F MNE G P + T+
Sbjct: 467 GVIEAYGQAALYEEALVAFNTMNEVGSKPTVETY 500
Score = 68.2 bits (165), Expect = 4e-09
Identities = 61/236 (25%), Positives = 102/236 (43%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 533
K +E+ PS V +S+ LIN S LD K + S+ +
Sbjct: 164 KCQEIFDEMPSHGVAPSVFSFTA--LINAYGRNGQYKSSLELLDRMKKERVSPSILTYNT 221
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V A+ G DW+ L LF M+ + + + Y ++ R GL D+ VF M
Sbjct: 222 VINSCARGGLDWEELLGLFAQMRHE-GIQADIVTYNTLLSACARRGLGDEAEMVFRTMNE 280
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G+ + +++ L+ +G+ + + ELL M+S P I +YN ++ A + G E
Sbjct: 281 GGILPDITTYSYLVETFGKLNRLEKVSELLKEMESGGSFPDITSYNVLLEAHAQSGSIKE 340
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+G+F QM+ G P+ TY+ LL D+ +F M + P+ T+
Sbjct: 341 A-MGVFRQMQGAGCVPNAATYSILLNLYGRHGRYDDVRDLFLEMKVSNTEPNAATY 395
Score = 60.8 bits (146), Expect = 6e-07
Identities = 48/218 (22%), Positives = 99/218 (45%), Gaps = 4/218 (1%)
Frame = -1
Query: 658 KGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLF 479
KG + E ++ K+ + +AR D F V + F Q G ++ +++ +
Sbjct: 509 KGGLYKESEAILLKMG----QSGVARNRDTFNG---------VIEAFRQGGQFEEAIKAY 555
Query: 478 KYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGR 299
M++ C P+E ++ + GL+++ E F E+ A G+ SV + ++ Y +
Sbjct: 556 VEMEKAR-CDPDEQTLEAVLSVYCFAGLVEESEEQFGEIKALGILPSVMCYCMMLAVYAK 614
Query: 298 NGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD----WEGLLGLFAQMRHDGIQ 131
++ + +LLD M + R++ + +I +RG D W+ + +F +++ +G
Sbjct: 615 ADRWDDAHQLLDEMFTNRVS----NIHQVIGQMIRGDYDDDSNWQMVEYVFEKLKSEGCS 670
Query: 130 PDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
+ YNTLL A + A V + G+ P++
Sbjct: 671 LGVRFYNTLLEALWWLGQKERATRVLNEATKRGLFPEL 708
Score = 58.9 bits (141), Expect = 2e-06
Identities = 44/175 (25%), Positives = 81/175 (46%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ F + G ++ + LF M + +PN Y +I G+ GL + ++ M
Sbjct: 397 ILINVFGEGGYFKEVVTLFHDMVEEN-VEPNMETYEGLIFACGKGGLHEDAKKILLHMNE 455
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
GV S ++T +I AYG+ Y+ +L + M P++ TYN++I +GGL ++
Sbjct: 456 KGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSKPTVETYNSLIQMFAKGGL-YK 514
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ +M G+ + T+N ++ A +EA + M +A PD T
Sbjct: 515 ESEAILLKMGQSGVARNRDTFNGVIEAFRQGGQFEEAIKAYVEMEKARCDPDEQT 569
>gb|EXB29767.1| hypothetical protein L484_008930 [Morus notabilis]
Length = 905
Score = 429 bits (1103), Expect = e-118
Identities = 204/235 (86%), Positives = 224/235 (95%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
RAKPKE+ILGNP+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 69 RAKPKEVILGNPAVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 128
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDK AE+FDEMP+ G
Sbjct: 129 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKSAEIFDEMPSQG 188
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
V RSVFS+TALINAYGRNGQY+ SL+LLDRMK ++++P+ILTYNT+I+AC RGGLDWEGL
Sbjct: 189 VVRSVFSYTALINAYGRNGQYETSLQLLDRMKKDKVSPNILTYNTVINACARGGLDWEGL 248
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHA 5
LGLFA+MRH+GIQPDLVTYNTLLGACA+R LGDEAEMVFR MNE GIVPDITT++
Sbjct: 249 LGLFAEMRHEGIQPDLVTYNTLLGACANRGLGDEAEMVFRTMNEGGIVPDITTYS 303
Score = 96.3 bits (238), Expect = 1e-17
Identities = 60/214 (28%), Positives = 102/214 (47%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YS VET KL L + + ++ N + + ++ + +A+ G ++ +F+ M
Sbjct: 302 YSCLVETF-GKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISEAVGVFRQM 360
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN + Y+I++ L G++G + E+F EM ++ LI +G G
Sbjct: 361 QTA-GCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATYNILIQVFGEGGY 419
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E + P++ TY +I AC +GGL + + + M GI P Y
Sbjct: 420 FKEVVTLFHDMVEENVEPNMETYEGLIIACGKGGLHGDAKI-ILNHMNEKGIVPSSKVYT 478
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +EA + F MNE G P + T+
Sbjct: 479 GVIEAYGQAALYEEALVAFNTMNEVGSRPSVETY 512
Score = 76.6 bits (187), Expect = 1e-11
Identities = 65/236 (27%), Positives = 108/236 (45%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD-VFKNKLSLN--DFVL 533
K E+ PS V + +SY LIN + + LD + K+K+S N +
Sbjct: 176 KSAEIFDEMPSQGVVRSVFSYTA--LINAYGRNGQYETSLQLLDRMKKDKVSPNILTYNT 233
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V A+ G DW+ L LF M+ + +P+ Y ++G GL D+ VF M
Sbjct: 234 VINACARGGLDWEGLLGLFAEMRHE-GIQPDLVTYNTLLGACANRGLGDEAEMVFRTMNE 292
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G+ + +++ L+ +G+ G+ + ELL M+S P I +YN ++ A G E
Sbjct: 293 GGIVPDITTYSCLVETFGKLGKLEKVSELLKEMESRGNLPDITSYNVLLEAYAESGSISE 352
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+G+F QM+ G P+ TY+ LL + ++ +F M + PD T+
Sbjct: 353 A-VGVFRQMQTAGCLPNANTYSILLNLYGKQGRYEDVRELFLEMKVSNTEPDAATY 407
Score = 61.6 bits (148), Expect = 3e-07
Identities = 45/175 (25%), Positives = 83/175 (47%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + + M
Sbjct: 409 ILIQVFGEGGYFKEVVTLFHDMVEEN-VEPNMETYEGLIIACGKGGLHGDAKIILNHMNE 467
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G+ S +T +I AYG+ Y+ +L + M PS+ TYN++IHA RGGL ++
Sbjct: 468 KGIVPSSKVYTGVIEAYGQAALYEEALVAFNTMNEVGSRPSVETYNSLIHAFSRGGL-YK 526
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ +M + + ++ +N+L+ A +EA + M ++ PD T
Sbjct: 527 EAEAILQRMGNSAVARNVDLFNSLIEAFRQGGQIEEAVKAYIEMGKSRCDPDERT 581
>ref|XP_004301287.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Fragaria vesca subsp. vesca]
Length = 862
Score = 427 bits (1098), Expect = e-117
Identities = 201/236 (85%), Positives = 223/236 (94%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
RAKPK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 49 RAKPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 108
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFA RGDWQRSLRLFKYMQRQIWCKP+EHIYTIMI LLGREGLLDKCAE+FDEMP G
Sbjct: 109 FKEFAARGDWQRSLRLFKYMQRQIWCKPSEHIYTIMISLLGREGLLDKCAEIFDEMPTQG 168
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
V RSVFS+TALINAYGRNGQ+++SL+LLDRMK ++++P+ILTYNT+++AC RGGLDWEGL
Sbjct: 169 VIRSVFSYTALINAYGRNGQFEMSLQLLDRMKKDKVSPNILTYNTVLNACARGGLDWEGL 228
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFA+MRH+G+QPDLVTYNTLL ACA R LGDEAEMVFR MNE GIVPDITT++Y
Sbjct: 229 LGLFAEMRHEGVQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYSY 284
Score = 102 bits (254), Expect = 2e-19
Identities = 67/221 (30%), Positives = 105/221 (47%), Gaps = 5/221 (2%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY VET KL++L + + ++ N + + ++ + +AQ G + ++ +F+ M
Sbjct: 282 YSYLVETF-GKLNNLEKVSELLKGMESGGNLPDITSYNVLLEAYAQLGSIKEAMGVFRQM 340
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q + C N Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 341 Q-EAGCMANAATYSILLNLYGRLGRYDDVRELFLEMKVSNAEPDAATYNILIQVFGEGGY 399
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
++ + L M E I P++ TY +I+AC +GGL E + M GI P Y
Sbjct: 400 FREVVTLFHDMVEENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMNEKGIVPSSKAYT 458
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITT-----HAY 2
+ A AL DEA + F MNE G P + + HAY
Sbjct: 459 GAIEAYGQAALYDEALVAFNTMNEVGSSPSVESFNSLIHAY 499
Score = 65.1 bits (157), Expect = 3e-08
Identities = 51/189 (26%), Positives = 86/189 (45%), Gaps = 3/189 (1%)
Frame = -1
Query: 565 KNKLSLN--DFVLVFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGL 395
K+K+S N + V A+ G DW+ L LF M+ + +P+ Y ++ GL
Sbjct: 201 KDKVSPNILTYNTVLNACARGGLDWEGLLGLFAEMRHE-GVQPDLVTYNTLLSACAGRGL 259
Query: 394 LDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNT 215
D+ VF M G+ + +++ L+ +G+ + ELL M+S P I +YN
Sbjct: 260 GDEAEMVFRTMNEGGIVPDITTYSYLVETFGKLNNLEKVSELLKGMESGGNLPDITSYNV 319
Query: 214 IIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEA 35
++ A + G E +G+F QM+ G + TY+ LL D+ +F M +
Sbjct: 320 LLEAYAQLGSIKEA-MGVFRQMQEAGCMANAATYSILLNLYGRLGRYDDVRELFLEMKVS 378
Query: 34 GIVPDITTH 8
PD T+
Sbjct: 379 NAEPDAATY 387
Score = 59.3 bits (142), Expect = 2e-06
Identities = 37/184 (20%), Positives = 91/184 (49%), Gaps = 4/184 (2%)
Frame = -1
Query: 556 LSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAE 377
++ + F + + F Q G ++ +++ + M+++ C P+E ++ + GL+++C E
Sbjct: 522 INASSFNGMIEAFRQGGQFEEAIKTYVEMEKRR-CDPDECTLEAVLSVYSVAGLVNECEE 580
Query: 376 VFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACV 197
F+E+ A G+ SV + ++ Y + ++ + +LL+ M + R++ + ++ +
Sbjct: 581 HFEEIKASGILPSVMCYCMMLAVYAKTDRWDDANKLLNEMLTNRVS----NIHQVMGQMI 636
Query: 196 RGGLD----WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGI 29
+G D W+ + +F +++ +G + YNTL+ A A V + G+
Sbjct: 637 KGDYDDESNWQMVEYVFDKLKSEGCGLGMRFYNTLIEALWWLGQKQRAVRVLSEATQRGL 696
Query: 28 VPDI 17
P++
Sbjct: 697 FPEL 700
Score = 58.2 bits (139), Expect = 4e-06
Identities = 45/177 (25%), Positives = 82/177 (46%), Gaps = 2/177 (1%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + + M
Sbjct: 389 ILIQVFGEGGYFREVVTLFHDMVEEN-IEPNMETYEGLIYACGKGGLHEDAKNILLHMNE 447
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGL--D 182
G+ S ++T I AYG+ Y +L + M +PS+ ++N++IHA RGGL +
Sbjct: 448 KGIVPSSKAYTGAIEAYGQAALYDEALVAFNTMNEVGSSPSVESFNSLIHAYARGGLYKE 507
Query: 181 WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
E +L + + GI + ++N ++ A +EA + M + PD T
Sbjct: 508 TEQVLSIMGEF---GIAINASSFNGMIEAFRQGGQFEEAIKTYVEMEKRRCDPDECT 561
>ref|XP_002322139.2| hypothetical protein POPTR_0015s08030g [Populus trichocarpa]
gi|550322283|gb|EEF06266.2| hypothetical protein
POPTR_0015s08030g [Populus trichocarpa]
Length = 866
Score = 426 bits (1096), Expect = e-117
Identities = 201/236 (85%), Positives = 225/236 (95%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
RAKPKEL+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF LV
Sbjct: 54 RAKPKELVLGNPSVVVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFALV 113
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFAQRGDWQRSLRLFK+MQRQIWCKPNEHIYTIMI LLGREGLL+KC+++F+EM AHG
Sbjct: 114 FKEFAQRGDWQRSLRLFKHMQRQIWCKPNEHIYTIMISLLGREGLLEKCSDIFEEMGAHG 173
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
VSRSVFS+TALIN+YGRNG+Y+VSLELL+RMK ER++PSILTYNT+I++C RGGLDWEGL
Sbjct: 174 VSRSVFSYTALINSYGRNGKYEVSLELLERMKKERVSPSILTYNTVINSCARGGLDWEGL 233
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFA+MRH+GIQPD+VTYNTLL AC++R LGDEAEMVFR MNE G+VPDITT+ Y
Sbjct: 234 LGLFAEMRHEGIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTYTY 289
Score = 95.5 bits (236), Expect = 2e-17
Identities = 59/214 (27%), Positives = 105/214 (49%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
Y+Y V+T KL+ L + + + N ++ + ++ + +A+ G+ + + +F+ M
Sbjct: 287 YTYLVDTF-GKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIGNIEDATGVFRLM 345
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q + C PN Y+I++GL G+ G D+ E+F EM ++ LI+ +G G
Sbjct: 346 Q-EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVFGEGGY 404
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E + P++ TY +I AC +GGL + + M G+ P Y
Sbjct: 405 FKEVVTLFHDMAEENVEPNMETYEGLIFACGKGGLH-DDAKKILLHMSEKGMIPSSKAYT 463
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A A+ +EA + MNE G P I T+
Sbjct: 464 GVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETY 497
Score = 71.6 bits (174), Expect = 3e-10
Identities = 49/166 (29%), Positives = 76/166 (45%)
Frame = -1
Query: 505 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 326
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 229 DWEGLLGLFAEMRHE-GIQPDIVTYNTLLCACSNRGLGDEAEMVFRTMNEGGVVPDITTY 287
Query: 325 TALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 146
T L++ +G+ + ELL M S P I +YN ++ A R G + E G+F M+
Sbjct: 288 TYLVDTFGKLNRLDKVSELLKEMASTGNVPEISSYNVLLEAYARIG-NIEDATGVFRLMQ 346
Query: 145 HDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
G P+ TY+ LLG DE +F M + PD T+
Sbjct: 347 EAGCVPNAETYSILLGLYGKHGRYDEVRELFLEMKVSNTEPDAATY 392
Score = 65.1 bits (157), Expect = 3e-08
Identities = 60/245 (24%), Positives = 107/245 (43%), Gaps = 2/245 (0%)
Frame = -1
Query: 739 RLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLIN-KLSSLPPRGSIARCL-DVF 566
RL+ + P A+ ++LG + + G+Y E + K+S+ P + L DVF
Sbjct: 343 RLMQEAGCVPNAETYSILLG---LYGKHGRYDEVRELFLEMKVSNTEPDAATYNTLIDVF 399
Query: 565 KNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDK 386
+ V +F + A+ +PN Y +I G+ GL D
Sbjct: 400 GEGGYFKEVVTLFHDMAEEN-----------------VEPNMETYEGLIFACGKGGLHDD 442
Query: 385 CAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIH 206
++ M G+ S ++T +I AYG+ Y+ +L L+ M P+I TYNT+I+
Sbjct: 443 AKKILLHMSEKGMIPSSKAYTGVIEAYGQAAMYEEALVTLNTMNEMGSKPTIETYNTLIY 502
Query: 205 ACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIV 26
RGGL ++ + +M G+ + ++N ++ +EA + M ++ +V
Sbjct: 503 MFARGGL-YKETEAILLKMGDFGVARERDSFNGVIEGFRQGGQFEEAIKAYVEMEKSRLV 561
Query: 25 PDITT 11
PD T
Sbjct: 562 PDERT 566
>ref|XP_007036056.1| Plastid transcriptionally active 2 isoform 3 [Theobroma cacao]
gi|508773301|gb|EOY20557.1| Plastid transcriptionally
active 2 isoform 3 [Theobroma cacao]
Length = 811
Score = 426 bits (1096), Expect = e-117
Identities = 207/274 (75%), Positives = 235/274 (85%), Gaps = 13/274 (4%)
Frame = -1
Query: 784 FFRLKKPSFLRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYS 644
F L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYS
Sbjct: 9 FLALTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYS 68
Query: 643 YDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQR 464
YDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQR
Sbjct: 69 YDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQR 128
Query: 463 QIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYK 284
QIWCKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y
Sbjct: 129 QIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYN 188
Query: 283 VSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 104
+SLELLD+MK +++ PSILTYNT+I+AC RGGLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 189 ISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Query: 103 LGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
L ACA+R LG+EAEMVFR MNE GI+PD+TT++Y
Sbjct: 249 LSACANRGLGNEAEMVFRTMNEGGILPDLTTYSY 282
Score = 93.6 bits (231), Expect = 8e-17
Identities = 63/214 (29%), Positives = 99/214 (46%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E I P++ TY+ +I AC +GGL E + M I P Y
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAYT 456
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +E + F MNE P I T+
Sbjct: 457 GVIEAYGQAALYEEVLVAFNTMNEVESNPTIETY 490
Score = 74.7 bits (182), Expect = 4e-11
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 533
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+G+F QM+ G P+ TY+ LL D+ +F M E+ PD T+
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATY 385
Score = 57.4 bits (137), Expect = 6e-06
Identities = 42/175 (24%), Positives = 81/175 (46%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + ++ M
Sbjct: 387 ILIQVFGEGGYFKEVVTLFHDMVEEN-IEPNVKTYDGLIFACGKGGLHEDAKKILLHMNE 445
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
+ S ++T +I AYG+ Y+ L + M P+I TYN+++ RGGL ++
Sbjct: 446 KCIVPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGL-YK 504
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ ++M G+ + ++N L+ A ++A + M +A PD T
Sbjct: 505 EANAILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERT 559
Score = 57.0 bits (136), Expect = 8e-06
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Frame = -1
Query: 571 VFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLL 392
V KN+ S N + F+ Q G ++ +++ + M++ C P+E ++ + GL+
Sbjct: 518 VAKNRDSFNALIEAFR---QGGQFEDAIKAYVEMEKAR-CDPDERTLEAVLSVYCFAGLV 573
Query: 391 DKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTI 212
D+ E F E+ A GV SV + ++ Y + ++ + +L D M +T + + +
Sbjct: 574 DESNEQFQEIKALGVLPSVMCYCMMLAVYAKCDRWDDAYQLFDEM----LTNKVSNIHQV 629
Query: 211 IHACVRGGLD----WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGM 44
I +RG D W+ + +F ++ +G + YN LL A + A V
Sbjct: 630 IGKMIRGDYDDDANWQMVEYVFDKLNSEGCGFGIRFYNALLEALWWLRQKERAARVLNEA 689
Query: 43 NEAGIVPDI 17
+ G+ P++
Sbjct: 690 TKRGLFPEL 698
>ref|XP_007036055.1| Plastid transcriptionally active 2 isoform 2 [Theobroma cacao]
gi|508773300|gb|EOY20556.1| Plastid transcriptionally
active 2 isoform 2 [Theobroma cacao]
Length = 770
Score = 426 bits (1096), Expect = e-117
Identities = 207/274 (75%), Positives = 235/274 (85%), Gaps = 13/274 (4%)
Frame = -1
Query: 784 FFRLKKPSFLRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYS 644
F L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYS
Sbjct: 9 FLALTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYS 68
Query: 643 YDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQR 464
YDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQR
Sbjct: 69 YDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQR 128
Query: 463 QIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYK 284
QIWCKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y
Sbjct: 129 QIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYN 188
Query: 283 VSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 104
+SLELLD+MK +++ PSILTYNT+I+AC RGGLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 189 ISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Query: 103 LGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
L ACA+R LG+EAEMVFR MNE GI+PD+TT++Y
Sbjct: 249 LSACANRGLGNEAEMVFRTMNEGGILPDLTTYSY 282
Score = 93.6 bits (231), Expect = 8e-17
Identities = 63/214 (29%), Positives = 99/214 (46%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E I P++ TY+ +I AC +GGL E + M I P Y
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAYT 456
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +E + F MNE P I T+
Sbjct: 457 GVIEAYGQAALYEEVLVAFNTMNEVESNPTIETY 490
Score = 74.7 bits (182), Expect = 4e-11
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 533
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+G+F QM+ G P+ TY+ LL D+ +F M E+ PD T+
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATY 385
Score = 57.4 bits (137), Expect = 6e-06
Identities = 42/175 (24%), Positives = 81/175 (46%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + ++ M
Sbjct: 387 ILIQVFGEGGYFKEVVTLFHDMVEEN-IEPNVKTYDGLIFACGKGGLHEDAKKILLHMNE 445
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
+ S ++T +I AYG+ Y+ L + M P+I TYN+++ RGGL ++
Sbjct: 446 KCIVPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGL-YK 504
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ ++M G+ + ++N L+ A ++A + M +A PD T
Sbjct: 505 EANAILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERT 559
Score = 57.0 bits (136), Expect = 8e-06
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Frame = -1
Query: 571 VFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLL 392
V KN+ S N + F+ Q G ++ +++ + M++ C P+E ++ + GL+
Sbjct: 518 VAKNRDSFNALIEAFR---QGGQFEDAIKAYVEMEKAR-CDPDERTLEAVLSVYCFAGLV 573
Query: 391 DKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTI 212
D+ E F E+ A GV SV + ++ Y + ++ + +L D M +T + + +
Sbjct: 574 DESNEQFQEIKALGVLPSVMCYCMMLAVYAKCDRWDDAYQLFDEM----LTNKVSNIHQV 629
Query: 211 IHACVRGGLD----WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGM 44
I +RG D W+ + +F ++ +G + YN LL A + A V
Sbjct: 630 IGKMIRGDYDDDANWQMVEYVFDKLNSEGCGFGIRFYNALLEALWWLRQKERAARVLNEA 689
Query: 43 NEAGIVPDI 17
+ G+ P++
Sbjct: 690 TKRGLFPEL 698
>ref|XP_007036054.1| Plastid transcriptionally active 2 isoform 1 [Theobroma cacao]
gi|508773299|gb|EOY20555.1| Plastid transcriptionally
active 2 isoform 1 [Theobroma cacao]
Length = 859
Score = 426 bits (1096), Expect = e-117
Identities = 207/274 (75%), Positives = 235/274 (85%), Gaps = 13/274 (4%)
Frame = -1
Query: 784 FFRLKKPSFLRITQRRLISNSIKPP-------------RAKPKELILGNPSVTVEKGKYS 644
F L +PS + +R+L SN I RAKP+EL+LGNPSVTVEKGKYS
Sbjct: 9 FLALTQPSNFALNRRQLSSNRIFTGGNHSFLSGGAGICRAKPRELVLGNPSVTVEKGKYS 68
Query: 643 YDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQR 464
YDVETLINKLSSLPPRGSIARCLDVF+NKLSLNDF LVFKEFA RGDWQRSLRLFKYMQR
Sbjct: 69 YDVETLINKLSSLPPRGSIARCLDVFRNKLSLNDFALVFKEFAHRGDWQRSLRLFKYMQR 128
Query: 463 QIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYK 284
QIWCKPNEHIYTIMI LLGREGLL+KC EVFDEMP+ GV+RSVF++TALINAYGRNG Y
Sbjct: 129 QIWCKPNEHIYTIMISLLGREGLLEKCREVFDEMPSQGVTRSVFAYTALINAYGRNGAYN 188
Query: 283 VSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTL 104
+SLELLD+MK +++ PSILTYNT+I+AC RGGLDWEGLLGLFA+MRH+GIQPD+VTYNTL
Sbjct: 189 ISLELLDKMKKDKVLPSILTYNTVINACARGGLDWEGLLGLFAEMRHEGIQPDIVTYNTL 248
Query: 103 LGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
L ACA+R LG+EAEMVFR MNE GI+PD+TT++Y
Sbjct: 249 LSACANRGLGNEAEMVFRTMNEGGILPDLTTYSY 282
Score = 93.6 bits (231), Expect = 8e-17
Identities = 63/214 (29%), Positives = 99/214 (46%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY VE+ KL L + + ++ N + + ++ + +A+ G + ++ +FK M
Sbjct: 280 YSYLVESF-GKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKEAMGVFKQM 338
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 339 Q-VAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATYNILIQVFGEGGY 397
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E I P++ TY+ +I AC +GGL E + M I P Y
Sbjct: 398 FKEVVTLFHDMVEENIEPNVKTYDGLIFACGKGGLH-EDAKKILLHMNEKCIVPSSRAYT 456
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +E + F MNE P I T+
Sbjct: 457 GVIEAYGQAALYEEVLVAFNTMNEVESNPTIETY 490
Score = 74.7 bits (182), Expect = 4e-11
Identities = 62/236 (26%), Positives = 105/236 (44%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 533
K +E+ PS V + ++Y LIN LD K S+ +
Sbjct: 154 KCREVFDEMPSQGVTRSVFAYTA--LINAYGRNGAYNISLELLDKMKKDKVLPSILTYNT 211
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V A+ G DW+ L LF M+ + +P+ Y ++ GL ++ VF M
Sbjct: 212 VINACARGGLDWEGLLGLFAEMRHE-GIQPDIVTYNTLLSACANRGLGNEAEMVFRTMNE 270
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G+ + +++ L+ ++G+ G+ + ELL M+S P I++YN ++ A + G E
Sbjct: 271 GGILPDLTTYSYLVESFGKLGKLEKVSELLKEMESGGNLPDIMSYNVLLEAYAKSGSIKE 330
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+G+F QM+ G P+ TY+ LL D+ +F M E+ PD T+
Sbjct: 331 A-MGVFKQMQVAGCAPNATTYSILLNLYGRNGRYDDVRELFLEMKESNTEPDAATY 385
Score = 57.4 bits (137), Expect = 6e-06
Identities = 42/175 (24%), Positives = 81/175 (46%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + ++ M
Sbjct: 387 ILIQVFGEGGYFKEVVTLFHDMVEEN-IEPNVKTYDGLIFACGKGGLHEDAKKILLHMNE 445
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
+ S ++T +I AYG+ Y+ L + M P+I TYN+++ RGGL ++
Sbjct: 446 KCIVPSSRAYTGVIEAYGQAALYEEVLVAFNTMNEVESNPTIETYNSLLQTFARGGL-YK 504
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ ++M G+ + ++N L+ A ++A + M +A PD T
Sbjct: 505 EANAILSRMNETGVAKNRDSFNALIEAFRQGGQFEDAIKAYVEMEKARCDPDERT 559
Score = 57.0 bits (136), Expect = 8e-06
Identities = 44/189 (23%), Positives = 87/189 (46%), Gaps = 4/189 (2%)
Frame = -1
Query: 571 VFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLL 392
V KN+ S N + F+ Q G ++ +++ + M++ C P+E ++ + GL+
Sbjct: 518 VAKNRDSFNALIEAFR---QGGQFEDAIKAYVEMEKAR-CDPDERTLEAVLSVYCFAGLV 573
Query: 391 DKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTI 212
D+ E F E+ A GV SV + ++ Y + ++ + +L D M +T + + +
Sbjct: 574 DESNEQFQEIKALGVLPSVMCYCMMLAVYAKCDRWDDAYQLFDEM----LTNKVSNIHQV 629
Query: 211 IHACVRGGLD----WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGM 44
I +RG D W+ + +F ++ +G + YN LL A + A V
Sbjct: 630 IGKMIRGDYDDDANWQMVEYVFDKLNSEGCGFGIRFYNALLEALWWLRQKERAARVLNEA 689
Query: 43 NEAGIVPDI 17
+ G+ P++
Sbjct: 690 TKRGLFPEL 698
>ref|XP_007210369.1| hypothetical protein PRUPE_ppa001337mg [Prunus persica]
gi|462406104|gb|EMJ11568.1| hypothetical protein
PRUPE_ppa001337mg [Prunus persica]
Length = 850
Score = 425 bits (1092), Expect = e-116
Identities = 201/239 (84%), Positives = 221/239 (92%)
Frame = -1
Query: 718 KPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDF 539
K P + PK+LILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKNKLSLNDF
Sbjct: 34 KTPDSSPKDLILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNKLSLNDF 93
Query: 538 VLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMP 359
LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC+EVFD+MP
Sbjct: 94 ALVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCSEVFDDMP 153
Query: 358 AHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDW 179
+ GV RSVFS+TALINAYGRNGQY+ SL+ LDRMK ++++PSILTYNT+++AC RGGL+W
Sbjct: 154 SQGVVRSVFSYTALINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNTVLNACARGGLEW 213
Query: 178 EGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
EGLLGLFA+MRH+GIQPDLVTYNTLL ACA R LGDEAEMVFR MNE GIVPDITT+ Y
Sbjct: 214 EGLLGLFAEMRHEGIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNEGGIVPDITTYRY 272
Score = 103 bits (257), Expect = 8e-20
Identities = 66/214 (30%), Positives = 101/214 (47%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
Y Y VET KL L + + ++ N + + ++ + +AQ G + S+ +F+ M
Sbjct: 270 YRYLVETF-GKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRESMGVFRQM 328
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L GR G D E+F EM ++ LI +G G
Sbjct: 329 QAA-GCMPNAATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATYNILIQVFGEGGY 387
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E I P++ TY +I+AC +GGL E + M GI P Y
Sbjct: 388 FKEVVTLFHDMVEENIEPNMETYEGLIYACGKGGLH-EDAKNILLHMSEKGIVPSSKAYT 446
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL DEA + F MNE G P + ++
Sbjct: 447 GVIEAYGQAALYDEALVAFNTMNEVGSKPSVESY 480
Score = 65.5 bits (158), Expect = 2e-08
Identities = 61/236 (25%), Positives = 101/236 (42%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL---SLNDFVL 533
K E+ PS V + +SY LIN + + LD K S+ +
Sbjct: 144 KCSEVFDDMPSQGVVRSVFSYTA--LINAYGRNGQYETSLQFLDRMKKDKVSPSILTYNT 201
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V A+ G +W+ L LF M+ + +P+ Y ++ GL D+ VF M
Sbjct: 202 VLNACARGGLEWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACAGRGLGDEAEMVFRTMNE 260
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G+ + ++ L+ +G+ + + ELL M+S P I +YN ++ A + G E
Sbjct: 261 GGIVPDITTYRYLVETFGKLDKLEKVSELLKEMESGGNLPDITSYNVLLEAYAQLGSIRE 320
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+G+F QM+ G P+ TY+ LL D+ +F M + PD T+
Sbjct: 321 S-MGVFRQMQAAGCMPNAATYSILLNLYGRHGRYDDVRELFLEMKISNTEPDPATY 375
Score = 61.2 bits (147), Expect = 4e-07
Identities = 42/183 (22%), Positives = 89/183 (48%), Gaps = 4/183 (2%)
Frame = -1
Query: 553 SLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEV 374
+++ F + + F Q G ++ +++ + M+++ C +E ++ + GL+++C E
Sbjct: 511 NVHTFNGMIEAFRQGGQFEEAIKAYVEMEKRR-CDHDEWTLEAVLSVYCVAGLVNECEEH 569
Query: 373 FDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVR 194
F EM A G+ SV + ++ Y RN ++ + ELL+ M + R + + +I ++
Sbjct: 570 FQEMKASGILPSVMCYCMMLAVYARNDRWDDANELLNEMLTNRAS----NIHQVIGQMIK 625
Query: 193 GGLD----WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIV 26
G D W+ + +F +++ +G + YNTLL A A V + G+
Sbjct: 626 GDYDDDSNWQMVEYVFDKLKSEGCGLGMRFYNTLLEALWWLGQKQRAVRVLNEATQRGLF 685
Query: 25 PDI 17
P++
Sbjct: 686 PEL 688
>ref|NP_177623.1| plastid transcriptionally active 2 [Arabidopsis thaliana]
gi|75194055|sp|Q9S7Q2.1|PP124_ARATH RecName:
Full=Pentatricopeptide repeat-containing protein
At1g74850, chloroplastic; AltName: Full=Protein PLASTID
TRANSCRIPTIONALLY ACTIVE 2; Flags: Precursor
gi|5882738|gb|AAD55291.1|AC008263_22 Contains 3 PF|01535
DUF17 domains [Arabidopsis thaliana]
gi|12323908|gb|AAG51934.1|AC013258_28 hypothetical
protein; 81052-84129 [Arabidopsis thaliana]
gi|332197518|gb|AEE35639.1| plastid transcriptionally
active 2 [Arabidopsis thaliana]
Length = 862
Score = 422 bits (1084), Expect = e-115
Identities = 200/236 (84%), Positives = 223/236 (94%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP+ G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG 171
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMK+E+I+PSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFA+MRH+GIQPD+VTYNTLL ACA R LGDEAEMVFR MN+ GIVPD+TT+++
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Score = 86.7 bits (213), Expect = 1e-14
Identities = 52/180 (28%), Positives = 86/180 (47%)
Frame = -1
Query: 550 LNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVF 371
+ + ++ + +A+ G + ++ +F MQ C PN + Y++++ L G+ G D ++F
Sbjct: 317 ITSYNVLLEAYAKSGSIKEAMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLF 375
Query: 370 DEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRG 191
EM + ++ LI +G G +K + L M E I P + TY II AC +G
Sbjct: 376 LEMKSSNTDPDAATYNILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKG 435
Query: 190 GLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
GL E + M + I P Y ++ A AL +EA + F M+E G P I T
Sbjct: 436 GLH-EDARKILQYMTANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIET 494
Score = 75.1 bits (183), Expect = 3e-11
Identities = 40/142 (28%), Positives = 73/142 (51%)
Frame = -1
Query: 448 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 269
P+ Y +++ + G + + VF +M A G + + +++ L+N +G++G+Y +L
Sbjct: 315 PDITSYNVLLEAYAKSGSIKEAMGVFHQMQAAGCTPNANTYSVLLNLFGQSGRYDDVRQL 374
Query: 268 LDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 89
MKS P TYN +I GG ++ ++ LF M + I+PD+ TY ++ AC
Sbjct: 375 FLEMKSSNTDPDAATYNILIEVFGEGGY-FKEVVTLFHDMVEENIEPDMETYEGIIFACG 433
Query: 88 SRALGDEAEMVFRGMNEAGIVP 23
L ++A + + M IVP
Sbjct: 434 KGGLHEDARKILQYMTANDIVP 455
Score = 66.6 bits (161), Expect = 1e-08
Identities = 37/147 (25%), Positives = 72/147 (48%)
Frame = -1
Query: 448 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 269
P+ Y+ ++ G+ L+K ++ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVCDLLGEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 268 LDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 89
+M++ TP+ TY+ +++ + G ++ + LF +M+ PD TYN L+
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSG-RYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 88 SRALGDEAEMVFRGMNEAGIVPDITTH 8
E +F M E I PD+ T+
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETY 425
Score = 57.8 bits (138), Expect = 5e-06
Identities = 49/228 (21%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Frame = -1
Query: 679 NPSV-TVEKGKYSYDVETLINKLSSLPPRGSIARCLD--VFKNKLSLNDFVLVFKEFAQR 509
NPS+ T YS+ L+ + ++ ++R +D + +N+ + N + +K Q
Sbjct: 489 NPSIETFHSLLYSFARGGLVKESEAI-----LSRLVDSGIPRNRDTFNAQIEAYK---QG 540
Query: 508 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFS 329
G ++ +++ + M++ C P+E ++ + L+D+C E F+EM A + S+
Sbjct: 541 GKFEEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMC 599
Query: 328 FTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD----WEGLLGL 161
+ ++ YG+ ++ ELL+ M S R++ + +I ++G D W+ + +
Sbjct: 600 YCMMLAVYGKTERWDDVNELLEEMLSNRVS----NIHQVIGQMIKGDYDDDSNWQIVEYV 655
Query: 160 FAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
++ +G + YN LL A + A V + G+ P++
Sbjct: 656 LDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPEL 703
>ref|XP_004508810.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cicer arietinum]
Length = 861
Score = 421 bits (1081), Expect = e-115
Identities = 199/236 (84%), Positives = 220/236 (93%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
RAKP+ELILGNPSVTVE GKYSYDVETLIN+LSSLPPRGSIARCLD FKNKLSLNDF +V
Sbjct: 49 RAKPRELILGNPSVTVESGKYSYDVETLINRLSSLPPRGSIARCLDSFKNKLSLNDFSVV 108
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP+ G
Sbjct: 109 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMITLLGREGLLDKCREVFDEMPSQG 168
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
V RSVF++TA+INAYGRNGQ++ S+ELLDRMK ER++PSILTYNT+I+AC RGGLDWEGL
Sbjct: 169 VPRSVFAYTAVINAYGRNGQFQTSVELLDRMKQERVSPSILTYNTVINACARGGLDWEGL 228
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFA+MRH+GIQPD++TYNTLL ACA R LGDEAEMVFR MNE G+VPDI T++Y
Sbjct: 229 LGLFAEMRHEGIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTYSY 284
Score = 97.8 bits (242), Expect = 4e-18
Identities = 61/214 (28%), Positives = 103/214 (48%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY V T KL+ L + R ++ N ++ + ++ + +A+ G + ++ +F+ M
Sbjct: 282 YSYLVHTF-GKLNKLEKVSELLREMESGGNLPDVSSYNVLLEAYAESGSIKDAIGVFRQM 340
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L G+ G D ++F EM ++ LI +G G
Sbjct: 341 QGA-GCVPNAATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTYNILIQVFGEGGY 399
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E + P++ TY +I AC +GGL +E + M G+ P Y
Sbjct: 400 FKEVVTLFHDMVDENVEPNMETYEGLIFACGKGGL-YEDAKKILLHMNERGVVPSSKAYT 458
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +EA + F MNE G P + T+
Sbjct: 459 GVIEAYGQAALYEEALVAFNTMNEVGSNPTVETY 492
Score = 67.8 bits (164), Expect = 5e-09
Identities = 44/166 (26%), Positives = 77/166 (46%)
Frame = -1
Query: 505 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 326
DW+ L LF M+ + +P+ Y ++ GL D+ VF M GV + ++
Sbjct: 224 DWEGLLGLFAEMRHE-GIQPDVITYNTLLSACAHRGLGDEAEMVFRTMNEGGVVPDINTY 282
Query: 325 TALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 146
+ L++ +G+ + + ELL M+S P + +YN ++ A G + +G+F QM+
Sbjct: 283 SYLVHTFGKLNKLEKVSELLREMESGGNLPDVSSYNVLLEAYAESG-SIKDAIGVFRQMQ 341
Query: 145 HDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
G P+ TY+ LL D+ +F M + PD T+
Sbjct: 342 GAGCVPNAATYSILLNLYGKHGRYDDVRDLFLEMKVSNTDPDAGTY 387
Score = 60.8 bits (146), Expect = 6e-07
Identities = 43/175 (24%), Positives = 84/175 (48%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + ++ M
Sbjct: 389 ILIQVFGEGGYFKEVVTLFHDMVDEN-VEPNMETYEGLIFACGKGGLYEDAKKILLHMNE 447
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
GV S ++T +I AYG+ Y+ +L + M P++ TYN+++ + RGGL ++
Sbjct: 448 RGVVPSSKAYTGVIEAYGQAALYEEALVAFNTMNEVGSNPTVETYNSLVRSFARGGL-YK 506
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ + +M G+ D+ ++N ++ A +EA M +A D +T
Sbjct: 507 EVEAILFRMGESGLPRDVHSFNGVIEALRQAGQYEEAVKAHVEMEKANCDYDEST 561
>ref|XP_002888995.1| hypothetical protein ARALYDRAFT_476621 [Arabidopsis lyrata subsp.
lyrata] gi|297334836|gb|EFH65254.1| hypothetical protein
ARALYDRAFT_476621 [Arabidopsis lyrata subsp. lyrata]
Length = 863
Score = 421 bits (1081), Expect = e-115
Identities = 199/236 (84%), Positives = 223/236 (94%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP+ G
Sbjct: 112 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPSQG 171
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMK+++I+PSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNDKISPSILTYNTVINACARGGLDWEGL 231
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFA+MRH+GIQPD+VTYNTLL ACA R LGDEAEMVFR MN+ GIVPD+TT+++
Sbjct: 232 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Score = 88.2 bits (217), Expect = 3e-15
Identities = 60/214 (28%), Positives = 99/214 (46%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YS+ VET KL L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 285 YSHLVETF-GKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 343
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 344 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 402
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E I P + TY II AC +GGL E + M + I P Y
Sbjct: 403 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH-EDARKILQYMTANDIVPSSKAYT 461
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +EA + F M+E G P I T+
Sbjct: 462 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETY 495
Score = 67.4 bits (163), Expect = 6e-09
Identities = 37/147 (25%), Positives = 73/147 (49%)
Frame = -1
Query: 448 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 269
P+ Y+ ++ G+ L+K +++ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 280 PDLTTYSHLVETFGKLRRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 339
Query: 268 LDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 89
+M++ TP+ TY+ +++ + G ++ + LF +M+ PD TYN L+
Sbjct: 340 FHQMQAAGCTPNANTYSVLLNLFGQSG-RYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 398
Query: 88 SRALGDEAEMVFRGMNEAGIVPDITTH 8
E +F M E I PD+ T+
Sbjct: 399 EGGYFKEVVTLFHDMVEENIEPDMETY 425
Score = 57.8 bits (138), Expect = 5e-06
Identities = 49/228 (21%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Frame = -1
Query: 679 NPSV-TVEKGKYSYDVETLINKLSSLPPRGSIARCLD--VFKNKLSLNDFVLVFKEFAQR 509
NPS+ T YS+ L+ + ++ ++R +D + +N+ + N + +K Q
Sbjct: 489 NPSIETYHSLLYSFARGGLVKESEAI-----LSRLVDSGIPRNRDTFNAQIEAYK---QG 540
Query: 508 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFS 329
G ++ +++ + M++ C P+E ++ + L+D+C E F+EM A + S+
Sbjct: 541 GKFEEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMC 599
Query: 328 FTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD----WEGLLGL 161
+ ++ YG+ ++ ELL+ M S R++ + +I ++G D W+ + +
Sbjct: 600 YCMMLAVYGKTERWDDVNELLEEMLSNRVS----NIHQVIGQMIKGDYDDDSNWQIVEYV 655
Query: 160 FAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
++ +G + YN LL A + A V + G+ P++
Sbjct: 656 LDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPEL 703
>ref|XP_006390383.1| hypothetical protein EUTSA_v10018112mg [Eutrema salsugineum]
gi|557086817|gb|ESQ27669.1| hypothetical protein
EUTSA_v10018112mg [Eutrema salsugineum]
Length = 863
Score = 420 bits (1080), Expect = e-115
Identities = 198/236 (83%), Positives = 223/236 (94%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 51 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 110
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC E+FDEMP+ G
Sbjct: 111 FKEFAGRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEIFDEMPSQG 170
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
V+RSVFS+TALINAYGRNG+Y+ SLELLDRMK+E+I+PSILTYNT+I+AC RGGLDWEGL
Sbjct: 171 VARSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 230
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFA+MRH+GIQPD+VTYNTLL ACA R LGDEAEMVFR MN+ GIVPD+TT+++
Sbjct: 231 LGLFAEMRHEGIQPDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 286
Score = 88.2 bits (217), Expect = 3e-15
Identities = 60/214 (28%), Positives = 99/214 (46%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YS+ VET KLS L + + + + + ++ + +A+ G + ++ +F M
Sbjct: 284 YSHLVETF-GKLSRLVKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGVFHQM 342
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN + Y++++ L G+ G D ++F EM + ++ LI +G G
Sbjct: 343 QAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATYNILIEVFGEGGY 401
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E I P + TY II AC +GGL E + M + P Y
Sbjct: 402 FKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLH-EDARKVLQYMTAKDVVPSSKAYT 460
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +EA + F M+E G P I T+
Sbjct: 461 GVIEAFGQAALYEEALVAFNTMHEVGSNPSIETY 494
Score = 66.2 bits (160), Expect = 1e-08
Identities = 37/147 (25%), Positives = 72/147 (48%)
Frame = -1
Query: 448 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 269
P+ Y+ ++ G+ L K +++ EM + G + S+ L+ AY ++G K ++ +
Sbjct: 279 PDLTTYSHLVETFGKLSRLVKVSDLLSEMASGGSLPDITSYNVLLEAYAKSGSIKEAMGV 338
Query: 268 LDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 89
+M++ TP+ TY+ +++ + G ++ + LF +M+ PD TYN L+
Sbjct: 339 FHQMQAAGCTPNANTYSVLLNLFGQSG-RYDDVRQLFLEMKSSNTDPDAATYNILIEVFG 397
Query: 88 SRALGDEAEMVFRGMNEAGIVPDITTH 8
E +F M E I PD+ T+
Sbjct: 398 EGGYFKEVVTLFHDMVEENIEPDMETY 424
Score = 57.0 bits (136), Expect = 8e-06
Identities = 37/172 (21%), Positives = 81/172 (47%), Gaps = 4/172 (2%)
Frame = -1
Query: 520 FAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSR 341
+ Q G ++ +++ + M++ C P+E ++ + L+D+C E F+EM A +
Sbjct: 536 YRQGGKFEEAVKTYVDMEKSR-CDPDERTLEAVLSVYSCARLVDECREQFEEMKASDILP 594
Query: 340 SVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD----WEG 173
S+ + +++ YG+ ++ ELL+ M S R++ + +I ++G D W+
Sbjct: 595 SIMCYCMMLSVYGKTERWGDVNELLEEMLSNRVS----NIHQVIGQMIKGDYDDDSNWQI 650
Query: 172 LLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
+ + ++ +G + YN LL A + A V + G+ P++
Sbjct: 651 VEYVLDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPEL 702
>ref|XP_002511477.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223550592|gb|EEF52079.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 754
Score = 418 bits (1074), Expect = e-114
Identities = 203/262 (77%), Positives = 229/262 (87%), Gaps = 8/262 (3%)
Frame = -1
Query: 769 KPSFLRITQRRLISNS--------IKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKL 614
KP+ L RRLIS S RAK KEL+LGNPSV VEKGKYSYDVETLINKL
Sbjct: 25 KPNLLPYPNRRLISLSGDRKTYSGAAKARAKTKELVLGNPSVVVEKGKYSYDVETLINKL 84
Query: 613 SSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHI 434
SSLPPRGSIARCL++FKNKLSLNDF LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHI
Sbjct: 85 SSLPPRGSIARCLEIFKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHI 144
Query: 433 YTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMK 254
YTI+I LLGREGLL+K E+F+EMP HGV RSVFS+TALIN+YGR+GQY+VSLELL+RMK
Sbjct: 145 YTIIISLLGREGLLEKSTEIFEEMPTHGVPRSVFSYTALINSYGRHGQYEVSLELLERMK 204
Query: 253 SERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALG 74
E++TPSILTYNT+I++C RGGL+WEGLL LFA+MRH+GIQPD++TYNTLL ACA+R LG
Sbjct: 205 KEKVTPSILTYNTVINSCARGGLNWEGLLSLFAEMRHEGIQPDIITYNTLLNACANRGLG 264
Query: 73 DEAEMVFRGMNEAGIVPDITTH 8
DEAEMVFR MNE G+VPDITT+
Sbjct: 265 DEAEMVFRTMNEGGMVPDITTY 286
Score = 97.1 bits (240), Expect = 7e-18
Identities = 62/226 (27%), Positives = 108/226 (47%), Gaps = 6/226 (2%)
Frame = -1
Query: 667 TVEKGKYSYDVETLIN------KLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRG 506
T+ +G D+ T N KL+ L + + ++ N ++ + ++ + +A +G
Sbjct: 273 TMNEGGMVPDITTYRNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKG 332
Query: 505 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 326
D + ++ +F+ MQ + C PN Y++++ L G G D E+F EM V ++
Sbjct: 333 DIRHAMGVFRQMQ-EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTY 391
Query: 325 TALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 146
LI +G G +K + L M E + P++ TY +I+AC +GGL E + M
Sbjct: 392 NVLIEVFGEGGYFKEVVTLFHDMVEENVEPNMGTYEGLIYACGKGGLH-EDAKKILLHMD 450
Query: 145 HDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
GI P Y ++ A A +EA ++F MNE G P + T+
Sbjct: 451 EKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETY 496
Score = 67.4 bits (163), Expect = 6e-09
Identities = 44/166 (26%), Positives = 76/166 (45%)
Frame = -1
Query: 505 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 326
+W+ L LF M+ + +P+ Y ++ GL D+ VF M G+ + ++
Sbjct: 228 NWEGLLSLFAEMRHE-GIQPDIITYNTLLNACANRGLGDEAEMVFRTMNEGGMVPDITTY 286
Query: 325 TALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 146
L+ +G+ + + ELL M+S P I +YN ++ A G D +G+F QM+
Sbjct: 287 RNLVETFGKLNKLEKVSELLKEMESSGNLPDISSYNVLLEAYASKG-DIRHAMGVFRQMQ 345
Query: 145 HDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
P+ VTY+ LL D+ +F M + PD+ T+
Sbjct: 346 EARCVPNAVTYSMLLNLYGGHGRYDDVRELFLEMKVSNTEPDVGTY 391
Score = 65.1 bits (157), Expect = 3e-08
Identities = 48/221 (21%), Positives = 93/221 (42%), Gaps = 34/221 (15%)
Frame = -1
Query: 577 LDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREG 398
+ V + + + ++ + F + G ++ + LF M + +PN Y +I G+ G
Sbjct: 379 MKVSNTEPDVGTYNVLIEVFGEGGYFKEVVTLFHDMVEEN-VEPNMGTYEGLIYACGKGG 437
Query: 397 LLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYN 218
L + ++ M G+ S ++T +I AYG+ Y+ +L + + M P++ TYN
Sbjct: 438 LHEDAKKILLHMDEKGIVPSTKAYTGVIEAYGQAASYEEALVMFNTMNEMGSKPTVETYN 497
Query: 217 TIIHACVRGGL----------------------------------DWEGLLGLFAQMRHD 140
++I+ RGGL +E + + ++
Sbjct: 498 SLINMFARGGLYKESEAIMWKMGESGVARDRDSFNGVIEGYRQGGQFEEAIKTYVELEKA 557
Query: 139 GIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
QPD T+ +L + L DE+E FR + +GI+P +
Sbjct: 558 RFQPDERTFEAVLSVYCTAGLVDESEEQFREIRASGILPSV 598
Score = 57.8 bits (138), Expect = 5e-06
Identities = 38/176 (21%), Positives = 86/176 (48%), Gaps = 4/176 (2%)
Frame = -1
Query: 532 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAH 353
V + + Q G ++ +++ + +++ + +P+E + ++ + GL+D+ E F E+ A
Sbjct: 534 VIEGYRQGGQFEEAIKTYVELEKARF-QPDERTFEAVLSVYCTAGLVDESEEQFREIRAS 592
Query: 352 GVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD--- 182
G+ SV + +I Y R+ ++ + E+LD M +T + + ++ ++G D
Sbjct: 593 GILPSVMCYCMMIAVYARSNRWDDAYEVLDEM----VTNKVSNIHQVVGKMMKGDYDDYS 648
Query: 181 -WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
W+ + +F ++ +G + YNTLL A + A V + G+ P++
Sbjct: 649 NWQMVEYVFDKLNSEGCGLGMRFYNTLLEALWWLGQKERAARVLSEAIKRGLFPEL 704
>ref|XP_006476695.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Citrus sinensis]
Length = 871
Score = 416 bits (1069), Expect = e-114
Identities = 199/249 (79%), Positives = 226/249 (90%)
Frame = -1
Query: 748 TQRRLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDV 569
++RR +++ RAKPKEL+LG+P+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+
Sbjct: 45 SRRRSLTSGTVQVRAKPKELVLGSPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDM 104
Query: 568 FKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLD 389
FKNKLSLNDF LVFKEFAQRGDWQRSLRLFKYMQRQIWCKP+E IYTIMI LLGRE LLD
Sbjct: 105 FKNKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPSEQIYTIMISLLGRENLLD 164
Query: 388 KCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTII 209
K +EVF+EMP+ GV RSVFS+TALINAYGR+GQY+ SLELLDRMK E+I P+ILTYNT+I
Sbjct: 165 KASEVFEEMPSQGVPRSVFSYTALINAYGRHGQYETSLELLDRMKREKIAPNILTYNTVI 224
Query: 208 HACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGI 29
+ACVRGGLDWE LLGLFA+MRH+GIQPD+VTYNTLL AC SR LGDEAEMVFR MNE G+
Sbjct: 225 NACVRGGLDWEDLLGLFAEMRHEGIQPDIVTYNTLLSACGSRGLGDEAEMVFRTMNEGGV 284
Query: 28 VPDITTHAY 2
+PD+TT +Y
Sbjct: 285 LPDLTTFSY 293
Score = 87.8 bits (216), Expect = 4e-15
Identities = 62/214 (28%), Positives = 99/214 (46%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
+SY VET KL L + R ++ N + + ++ + A+ G + ++ +F+ M
Sbjct: 291 FSYLVETF-GKLGKLEKVSELLREMESGGNLPDVTCYNVLLEAHAKMGSIKEAMDVFRQM 349
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q N Y+I++ L GR G D E+F EM A + ++ LI +G G
Sbjct: 350 QAA-GSVANATTYSILLNLYGRNGRYDDVRELFLEMKASNTEPNAATYNILIQVFGEGGY 408
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E + P++ TY +I AC +GGL E + + M G P Y
Sbjct: 409 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH-EDVKKILLYMNERGTVPSSKAYT 467
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +EA + F MNE P I T+
Sbjct: 468 GVIEAYGLAALYEEALVAFNTMNEVESKPTIETY 501
Score = 65.1 bits (157), Expect = 3e-08
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKN-KLSLN--DFVL 533
K E+ PS V + +SY LIN + LD K K++ N +
Sbjct: 165 KASEVFEEMPSQGVPRSVFSYTA--LINAYGRHGQYETSLELLDRMKREKIAPNILTYNT 222
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V + G DW+ L LF M+ + +P+ Y ++ G GL D+ VF M
Sbjct: 223 VINACVRGGLDWEDLLGLFAEMRHE-GIQPDIVTYNTLLSACGSRGLGDEAEMVFRTMNE 281
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
GV + +F+ L+ +G+ G+ + ELL M+S P + YN ++ A + G E
Sbjct: 282 GGVLPDLTTFSYLVETFGKLGKLEKVSELLREMESGGNLPDVTCYNVLLEAHAKMGSIKE 341
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+ +F QM+ G + TY+ LL D+ +F M + P+ T+
Sbjct: 342 A-MDVFRQMQAAGSVANATTYSILLNLYGRNGRYDDVRELFLEMKASNTEPNAATY 396
Score = 65.1 bits (157), Expect = 3e-08
Identities = 52/244 (21%), Positives = 108/244 (44%), Gaps = 4/244 (1%)
Frame = -1
Query: 727 NSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSL 548
N++ +KP + T +G + + +++++S +AR D F
Sbjct: 487 NTMNEVESKPTIETYNSLLHTFSRGGLYKECQAILSRMSE----SGVARNSDSFN----- 537
Query: 547 NDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFD 368
V + F Q G ++ +++ + M++ + C PNE ++ + GL+D+ E F
Sbjct: 538 ----AVIEAFRQGGRFEEAIKAYVEMEK-VRCDPNERTLEAVLSVYCFAGLVDESKEQFQ 592
Query: 367 EMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGG 188
E+ + G+ SV + L+ Y ++ ++ + LLD M + RI+ + + ++G
Sbjct: 593 EIKSSGILPSVMCYCMLLAVYAKSNRWDDAYGLLDEMYTNRIS----NIHQVTGQMIKGE 648
Query: 187 LD----WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPD 20
D W+ + +F ++ +G + YN LL A L + A V + G+ P+
Sbjct: 649 FDDESNWQMVEYVFDKLNCEGYGLGMRFYNALLEALWCLGLRERAARVLDEATKRGLFPE 708
Query: 19 ITTH 8
+ H
Sbjct: 709 LFRH 712
Score = 57.8 bits (138), Expect = 5e-06
Identities = 42/175 (24%), Positives = 81/175 (46%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + ++ M
Sbjct: 398 ILIQVFGEGGYFKEVVTLFHDMVEEN-VEPNMETYEGLIFACGKGGLHEDVKKILLYMNE 456
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G S ++T +I AYG Y+ +L + M P+I TYN+++H RGGL ++
Sbjct: 457 RGTVPSSKAYTGVIEAYGLAALYEEALVAFNTMNEVESKPTIETYNSLLHTFSRGGL-YK 515
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ ++M G+ + ++N ++ A +EA + M + P+ T
Sbjct: 516 ECQAILSRMSESGVARNSDSFNAVIEAFRQGGRFEEAIKAYVEMEKVRCDPNERT 570
>ref|XP_006300609.1| hypothetical protein CARUB_v10019779mg [Capsella rubella]
gi|482569319|gb|EOA33507.1| hypothetical protein
CARUB_v10019779mg [Capsella rubella]
Length = 865
Score = 416 bits (1069), Expect = e-114
Identities = 198/236 (83%), Positives = 220/236 (93%)
Frame = -1
Query: 709 RAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLV 530
+AK K+L+LGNPSV+VEKGKYSYDVE+LINKLSSLPPRGSIARCLD+FKNKLSLNDF LV
Sbjct: 52 KAKTKDLVLGNPSVSVEKGKYSYDVESLINKLSSLPPRGSIARCLDIFKNKLSLNDFALV 111
Query: 529 FKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHG 350
FKEFA R DWQRSLRLFKYMQRQIWCKPNEHIYTIMI LLGREGLLDKC EVFDEMP G
Sbjct: 112 FKEFAGRSDWQRSLRLFKYMQRQIWCKPNEHIYTIMISLLGREGLLDKCLEVFDEMPGQG 171
Query: 349 VSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGL 170
VSRSVFS+TALINAYGRNG+Y+ SLELLDRMK+E+I+PSILTYNT+I+AC RGGLDWEGL
Sbjct: 172 VSRSVFSYTALINAYGRNGRYETSLELLDRMKNEKISPSILTYNTVINACARGGLDWEGL 231
Query: 169 LGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTHAY 2
LGLFA+MRH+GIQ D+VTYNTLL ACA R LGDEAEMVFR MN+ GIVPD+TT+++
Sbjct: 232 LGLFAEMRHEGIQSDIVTYNTLLSACAIRGLGDEAEMVFRTMNDGGIVPDLTTYSH 287
Score = 90.5 bits (223), Expect = 7e-16
Identities = 60/226 (26%), Positives = 102/226 (45%), Gaps = 6/226 (2%)
Frame = -1
Query: 667 TVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLS------LNDFVLVFKEFAQRG 506
T+ G D+ T + + + G + + D+ S + + ++ + +A+ G
Sbjct: 272 TMNDGGIVPDLTTYSHLVETFGKLGRLEKVSDLLSEMASGGSLPDITSYNVLLEAYAKSG 331
Query: 505 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 326
+ S+ +F MQ C PN + Y++++ L G+ G D ++F EM + ++
Sbjct: 332 SIKESMGVFHQMQAA-GCTPNANTYSVLLNLFGQSGRYDDVRQLFLEMKSSNTDPDAATY 390
Query: 325 TALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 146
LI +G G +K + L M E I P + TY II AC +GGL E + M
Sbjct: 391 NILIEVFGEGGYFKEVVTLFHDMVEENIEPDMETYEGIIFACGKGGLQ-EDARKILQYMT 449
Query: 145 HDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+ I P Y ++ A AL +EA + F M+E G P I T+
Sbjct: 450 ANDIVPSSKAYTGVIEAFGQAALYEEALVAFNTMHEVGSNPSIETY 495
Score = 57.4 bits (137), Expect = 6e-06
Identities = 49/228 (21%), Positives = 106/228 (46%), Gaps = 7/228 (3%)
Frame = -1
Query: 679 NPSV-TVEKGKYSYDVETLINKLSSLPPRGSIARCLD--VFKNKLSLNDFVLVFKEFAQR 509
NPS+ T YS+ L+ + ++ ++R +D + +N+ + N + +K Q
Sbjct: 489 NPSIETYHSLLYSFARGGLVKESEAI-----LSRLVDSGIPRNRDTFNAQIEAYK---QG 540
Query: 508 GDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFS 329
G ++ +++ + M++ C P+E ++ + L+D+C E F+EM A + S+
Sbjct: 541 GRFEEAVKTYVDMEKSR-CDPDERTLEAVLSVYSFARLVDECREQFEEMKASDILPSIMC 599
Query: 328 FTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD----WEGLLGL 161
+ ++ YG+ ++ ELL+ M S R++ + +I ++G D W+ + +
Sbjct: 600 YCMMLAVYGKTERWDDVNELLEEMLSNRVS----NIHQVIGQMIKGDYDDDSNWQIVEYV 655
Query: 160 FAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
++ +G + YN LL A + A V + G+ P++
Sbjct: 656 LDKLNSEGCGLGIRFYNALLDALWWLGQKERAARVLNEATKRGLFPEL 703
>ref|XP_006439718.1| hypothetical protein CICLE_v10018817mg [Citrus clementina]
gi|557541980|gb|ESR52958.1| hypothetical protein
CICLE_v10018817mg [Citrus clementina]
Length = 871
Score = 414 bits (1065), Expect = e-113
Identities = 198/247 (80%), Positives = 224/247 (90%)
Frame = -1
Query: 742 RRLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFK 563
RR +++ RAKPKEL+LG+P+VTVEKGKYSYDVETLINKLSSLPPRGSIARCLD+FK
Sbjct: 47 RRSLTSGTLQVRAKPKELVLGSPTVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDMFK 106
Query: 562 NKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKC 383
NKLSLNDF LVFKEFAQRGDWQRSLRLFKYMQRQIWCKP+E IYTIMI LLGRE LLDK
Sbjct: 107 NKLSLNDFALVFKEFAQRGDWQRSLRLFKYMQRQIWCKPSEQIYTIMISLLGRENLLDKA 166
Query: 382 AEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHA 203
+EVF+EMP+ GV+RSVFS+TALINAYGR+GQY+ SLELLDRMK E+I P+ILTYNT+I+A
Sbjct: 167 SEVFEEMPSQGVARSVFSYTALINAYGRHGQYETSLELLDRMKREKIAPNILTYNTVINA 226
Query: 202 CVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVP 23
CVRGGLDWE LLGLFA+MRH+GIQPD+VTYNTLL AC R LGDEAEMVFR MNE G++P
Sbjct: 227 CVRGGLDWEDLLGLFAEMRHEGIQPDIVTYNTLLSACGGRGLGDEAEMVFRTMNEGGVLP 286
Query: 22 DITTHAY 2
D+TT +Y
Sbjct: 287 DLTTFSY 293
Score = 87.8 bits (216), Expect = 4e-15
Identities = 62/214 (28%), Positives = 99/214 (46%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
+SY VET KL L + R ++ N + + ++ + A+ G + ++ +F+ M
Sbjct: 291 FSYLVETF-GKLGKLEKVSELLREMESGGNLPDVTCYNVLLEAHAKMGSIKEAMDVFRQM 349
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q N Y+I++ L GR G D E+F EM A + ++ LI +G G
Sbjct: 350 QAA-GSVANATTYSILLNLYGRNGRYDDVRELFLEMKASNTEPNAATYNILIQVFGEGGY 408
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L M E + P++ TY +I AC +GGL E + + M G P Y
Sbjct: 409 FKEVVTLFHDMVEENVEPNMETYEGLIFACGKGGLH-EDVKKILLYMNERGTVPSSKAYT 467
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
++ A AL +EA + F MNE P I T+
Sbjct: 468 GVIEAYGLAALYEEALVAFNTMNEVESKPTIETY 501
Score = 64.7 bits (156), Expect = 4e-08
Identities = 62/236 (26%), Positives = 101/236 (42%), Gaps = 4/236 (1%)
Frame = -1
Query: 703 KPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKN-KLSLN--DFVL 533
K E+ PS V + +SY LIN + LD K K++ N +
Sbjct: 165 KASEVFEEMPSQGVARSVFSYTA--LINAYGRHGQYETSLELLDRMKREKIAPNILTYNT 222
Query: 532 VFKEFAQRG-DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
V + G DW+ L LF M+ + +P+ Y ++ G GL D+ VF M
Sbjct: 223 VINACVRGGLDWEDLLGLFAEMRHE-GIQPDIVTYNTLLSACGGRGLGDEAEMVFRTMNE 281
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
GV + +F+ L+ +G+ G+ + ELL M+S P + YN ++ A + G E
Sbjct: 282 GGVLPDLTTFSYLVETFGKLGKLEKVSELLREMESGGNLPDVTCYNVLLEAHAKMGSIKE 341
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
+ +F QM+ G + TY+ LL D+ +F M + P+ T+
Sbjct: 342 A-MDVFRQMQAAGSVANATTYSILLNLYGRNGRYDDVRELFLEMKASNTEPNAATY 396
Score = 62.0 bits (149), Expect = 3e-07
Identities = 41/184 (22%), Positives = 86/184 (46%), Gaps = 4/184 (2%)
Frame = -1
Query: 547 NDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFD 368
+ F V + F Q G ++ +++ + M++ + C PNE ++ + GL+D+ E F
Sbjct: 534 DSFNAVIEAFRQGGRFEEAIKAYVEMEK-VRCDPNERTLEAVLSVYCFAGLVDESKEQFQ 592
Query: 367 EMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGG 188
E+ + G+ SV + L+ Y ++ ++ + LLD M + RI+ + + ++G
Sbjct: 593 EIKSSGILPSVMCYCMLLAVYAKSNRWDDAYGLLDEMHTNRIS----NIHQVTGQMIKGE 648
Query: 187 LD----WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPD 20
D W+ + +F ++ +G + YN L+ A + A V + G+ P+
Sbjct: 649 FDDESNWQMVEYVFDKLNCEGYGLGMRFYNALMEALWCLGQRERAARVLDEATKRGLFPE 708
Query: 19 ITTH 8
+ H
Sbjct: 709 LFRH 712
Score = 58.5 bits (140), Expect = 3e-06
Identities = 42/175 (24%), Positives = 81/175 (46%)
Frame = -1
Query: 535 LVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPA 356
++ + F + G ++ + LF M + +PN Y +I G+ GL + ++ M
Sbjct: 398 ILIQVFGEGGYFKEVVTLFHDMVEEN-VEPNMETYEGLIFACGKGGLHEDVKKILLYMNE 456
Query: 355 HGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWE 176
G S ++T +I AYG Y+ +L + M P+I TYN+++H RGGL ++
Sbjct: 457 RGTVPSSKAYTGVIEAYGLAALYEEALVAFNTMNEVESKPTIETYNSLLHTFARGGL-YK 515
Query: 175 GLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ ++M G+ + ++N ++ A +EA + M + P+ T
Sbjct: 516 ECQAILSRMSESGVARNSDSFNAVIEAFRQGGRFEEAIKAYVEMEKVRCDPNERT 570
>ref|XP_004157803.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 411 bits (1057), Expect = e-112
Identities = 195/244 (79%), Positives = 223/244 (91%)
Frame = -1
Query: 733 ISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL 554
+S+ + RAK K+L+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKN+L
Sbjct: 51 LSSDVGKVRAKAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRL 110
Query: 553 SLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEV 374
SLNDF LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTI+I LLGREGLL+KC+E+
Sbjct: 111 SLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEI 170
Query: 373 FDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVR 194
FDEM + GV RSVFS+TALINAYGRNGQY+ SLELL+RMK ER++P+ILTYNT+I+AC R
Sbjct: 171 FDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACAR 230
Query: 193 GGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDIT 14
G LDWEGLLGLFA+MRH+G+QPDLVTYNTLL ACA+R LGDEAEMVF+ M E GIVP+IT
Sbjct: 231 GDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 13 THAY 2
T++Y
Sbjct: 291 TYSY 294
Score = 94.7 bits (234), Expect = 4e-17
Identities = 64/214 (29%), Positives = 101/214 (47%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY VET KL L + + ++ ++ + ++ + A+ G + ++ +FK M
Sbjct: 292 YSYIVETF-GKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L G+ G D E+F +M ++ LI +G G
Sbjct: 351 QAA-GCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L + E I P++ TY ++ AC +GGL + LF M GI P Y+
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF-HMNGKGIVPSSKAYS 468
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
L+ A AL DEA + F MNE G I T+
Sbjct: 469 GLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTY 502
Score = 62.4 bits (150), Expect = 2e-07
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Frame = -1
Query: 532 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAH 353
+ + + Q G ++ +++ F M++ + C+ +E ++G+ GL+D+ E F E+ A
Sbjct: 540 IIEGYRQSGQYEEAIKAFVEMEK-MRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKAS 598
Query: 352 GVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD--- 182
G+ SV + ++ Y +NG++ + ELLD M R++ + + +I ++G D
Sbjct: 599 GILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVS----SIHQVIGQMIKGDYDDDS 654
Query: 181 -WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
W+ + +F ++ +G + YNTLL A A V + G+ P++
Sbjct: 655 NWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPEL 710
>ref|XP_004152453.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Cucumis sativus]
Length = 864
Score = 411 bits (1057), Expect = e-112
Identities = 195/244 (79%), Positives = 223/244 (91%)
Frame = -1
Query: 733 ISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKL 554
+S+ + RAK K+L+LGNPSV VEKGKYSYDVETLINKLSSLPPRGSIARCLD+FKN+L
Sbjct: 51 LSSDVGKVRAKAKDLVLGNPSVIVEKGKYSYDVETLINKLSSLPPRGSIARCLDIFKNRL 110
Query: 553 SLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEV 374
SLNDF LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIYTI+I LLGREGLL+KC+E+
Sbjct: 111 SLNDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIYTIIISLLGREGLLEKCSEI 170
Query: 373 FDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVR 194
FDEM + GV RSVFS+TALINAYGRNGQY+ SLELL+RMK ER++P+ILTYNT+I+AC R
Sbjct: 171 FDEMASQGVIRSVFSYTALINAYGRNGQYETSLELLERMKRERVSPNILTYNTVINACAR 230
Query: 193 GGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDIT 14
G LDWEGLLGLFA+MRH+G+QPDLVTYNTLL ACA+R LGDEAEMVF+ M E GIVP+IT
Sbjct: 231 GDLDWEGLLGLFAEMRHEGVQPDLVTYNTLLSACAARGLGDEAEMVFKTMIEGGIVPEIT 290
Query: 13 THAY 2
T++Y
Sbjct: 291 TYSY 294
Score = 94.7 bits (234), Expect = 4e-17
Identities = 64/214 (29%), Positives = 101/214 (47%)
Frame = -1
Query: 649 YSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYM 470
YSY VET KL L + + ++ ++ + ++ + A+ G + ++ +FK M
Sbjct: 292 YSYIVETF-GKLGKLEKVAMLLKEMESEGYLPDISSYNVLIEAHAKLGSIKEAMDVFKQM 350
Query: 469 QRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQ 290
Q C PN Y+I++ L G+ G D E+F +M ++ LI +G G
Sbjct: 351 QAA-GCVPNASTYSILLNLYGKHGRYDDVRELFLQMKESSAEPDATTYNILIRVFGEGGY 409
Query: 289 YKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYN 110
+K + L + E I P++ TY ++ AC +GGL + LF M GI P Y+
Sbjct: 410 FKEVVTLFHDLVDENIDPNMETYEGLVFACGKGGLHEDAKKILF-HMNGKGIVPSSKAYS 468
Query: 109 TLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
L+ A AL DEA + F MNE G I T+
Sbjct: 469 GLIEAYGQAALYDEALVAFNTMNEVGSKSTIDTY 502
Score = 62.4 bits (150), Expect = 2e-07
Identities = 42/176 (23%), Positives = 87/176 (49%), Gaps = 4/176 (2%)
Frame = -1
Query: 532 VFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAH 353
+ + + Q G ++ +++ F M++ + C+ +E ++G+ GL+D+ E F E+ A
Sbjct: 540 IIEGYRQSGQYEEAIKAFVEMEK-MRCELDEQTLEGVLGVYCFAGLVDESKEQFIEIKAS 598
Query: 352 GVSRSVFSFTALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLD--- 182
G+ SV + ++ Y +NG++ + ELLD M R++ + + +I ++G D
Sbjct: 599 GILPSVLCYCMMLAVYAKNGRWDDASELLDEMIKTRVS----SIHQVIGQMIKGDYDDDS 654
Query: 181 -WEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDI 17
W+ + +F ++ +G + YNTLL A A V + G+ P++
Sbjct: 655 NWQMVEYVFDKLNAEGCGFGMRFYNTLLEALWWLGQKGRAARVLTEATKRGLFPEL 710
>ref|XP_006344988.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Solanum tuberosum]
Length = 860
Score = 410 bits (1053), Expect = e-112
Identities = 197/263 (74%), Positives = 232/263 (88%), Gaps = 3/263 (1%)
Frame = -1
Query: 781 FRLKKPSFLRIT---QRRLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLS 611
F K P++ ++ +R L++ ++ RAKPK+LILGNP+VTVEKGKYSYDVETLINKLS
Sbjct: 23 FPTKIPNYYKLPGFHRRLLLTVAV---RAKPKDLILGNPTVTVEKGKYSYDVETLINKLS 79
Query: 610 SLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIY 431
SLPPRGSIARCLD FKNKLSL+DF LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY
Sbjct: 80 SLPPRGSIARCLDTFKNKLSLSDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIY 139
Query: 430 TIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKS 251
T+MIG+LGREGLLDK E+FDEM H V+R+VFS+TA+INAYGRNGQY+ SL+LL++MK
Sbjct: 140 TLMIGILGREGLLDKAFEIFDEMSTHSVARTVFSYTAIINAYGRNGQYETSLQLLEKMKQ 199
Query: 250 ERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGD 71
E I PSILTYNT+I++C RGG +WEGLLGLFA+MRH+GIQPDLVTYNTLL AC+SR L D
Sbjct: 200 ENIVPSILTYNTVINSCARGGYEWEGLLGLFAEMRHEGIQPDLVTYNTLLSACSSRELED 259
Query: 70 EAEMVFRGMNEAGIVPDITTHAY 2
EAEMVFR MNEAG++PD+TT++Y
Sbjct: 260 EAEMVFRTMNEAGVLPDVTTYSY 282
Score = 96.7 bits (239), Expect = 9e-18
Identities = 63/222 (28%), Positives = 102/222 (45%)
Frame = -1
Query: 676 PSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQ 497
P VT YSY VET KL L + ++ + + ++ + +A G +
Sbjct: 275 PDVTT----YSYLVETF-GKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMK 329
Query: 496 RSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTAL 317
++ +F+ MQ C N Y+I++ L G+ G D+ E+F EM ++ L
Sbjct: 330 EAMDVFRQMQAA-GCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTYNIL 388
Query: 316 INAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDG 137
I +G G +K + L M E++ P++ TY +I+AC +GGL E + M G
Sbjct: 389 IQVFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGGLH-EDAKRILLHMNGQG 447
Query: 136 IQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ P Y ++ A AL +EA + F MNE G P + T
Sbjct: 448 LVPSSKVYTAVIEAYGQAALYEEAVVAFNTMNEVGSRPMVET 489
Score = 65.9 bits (159), Expect = 2e-08
Identities = 38/147 (25%), Positives = 73/147 (49%)
Frame = -1
Query: 448 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 269
P+ Y+ ++ G+ G L+K +E+ EM A G S V S+ L+ AY G K ++++
Sbjct: 275 PDVTTYSYLVETFGKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMKEAMDV 334
Query: 268 LDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 89
+M++ + TY+ +++ + G ++ + LF +M+ +PD TYN L+
Sbjct: 335 FRQMQAAGCVANAETYSILLNLYGKNGR-YDQVRELFLEMKTSNTEPDADTYNILIQVFG 393
Query: 88 SRALGDEAEMVFRGMNEAGIVPDITTH 8
E +F M E + P++ T+
Sbjct: 394 EGGYFKEVVTLFHDMVEEKVEPNMETY 420
Score = 59.7 bits (143), Expect = 1e-06
Identities = 41/166 (24%), Positives = 75/166 (45%)
Frame = -1
Query: 505 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 326
+W+ L LF M+ + +P+ Y ++ L D+ VF M GV V ++
Sbjct: 222 EWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTY 280
Query: 325 TALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 146
+ L+ +G+ G+ + ELL M++ +P + +YN ++ A G + + +F QM+
Sbjct: 281 SYLVETFGKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLG-SMKEAMDVFRQMQ 339
Query: 145 HDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
G + TY+ LL D+ +F M + PD T+
Sbjct: 340 AAGCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTY 385
>ref|XP_004236160.1| PREDICTED: pentatricopeptide repeat-containing protein At1g74850,
chloroplastic-like [Solanum lycopersicum]
Length = 860
Score = 408 bits (1049), Expect = e-111
Identities = 196/263 (74%), Positives = 231/263 (87%), Gaps = 3/263 (1%)
Frame = -1
Query: 781 FRLKKPSFLRIT---QRRLISNSIKPPRAKPKELILGNPSVTVEKGKYSYDVETLINKLS 611
F K P++ ++ +R L++ ++ RAKPK+LILGNP+VTVEKGKYSYDVETLINKLS
Sbjct: 23 FPAKIPNYYKLPGLHRRLLLTVAV---RAKPKDLILGNPTVTVEKGKYSYDVETLINKLS 79
Query: 610 SLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQRSLRLFKYMQRQIWCKPNEHIY 431
SLPPRGSIARCLD FKNKLSL DF LVFKEFA RGDWQRSLRLFKYMQRQIWCKPNEHIY
Sbjct: 80 SLPPRGSIARCLDTFKNKLSLTDFSLVFKEFAARGDWQRSLRLFKYMQRQIWCKPNEHIY 139
Query: 430 TIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLELLDRMKS 251
T+MIG+LGREGLLDK E+FDEM H V+R+VFS+TA+IN+YGRNGQY+ SL+LL++MK
Sbjct: 140 TLMIGILGREGLLDKAFEIFDEMSTHNVARTVFSYTAIINSYGRNGQYETSLQLLEKMKQ 199
Query: 250 ERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACASRALGD 71
E I PSILTYNT+I++C RGG +WEGLLGLFA+MRH+GIQPDLVTYNTLL AC+SR L D
Sbjct: 200 ENIVPSILTYNTVINSCARGGYEWEGLLGLFAEMRHEGIQPDLVTYNTLLSACSSRELED 259
Query: 70 EAEMVFRGMNEAGIVPDITTHAY 2
EAEMVFR MNEAG++PD+TT++Y
Sbjct: 260 EAEMVFRTMNEAGVLPDVTTYSY 282
Score = 96.7 bits (239), Expect = 9e-18
Identities = 63/222 (28%), Positives = 102/222 (45%)
Frame = -1
Query: 676 PSVTVEKGKYSYDVETLINKLSSLPPRGSIARCLDVFKNKLSLNDFVLVFKEFAQRGDWQ 497
P VT YSY VET KL L + ++ + + ++ + +A G +
Sbjct: 275 PDVTT----YSYLVETF-GKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMK 329
Query: 496 RSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTAL 317
++ +F+ MQ C N Y+I++ L G+ G D+ E+F EM ++ L
Sbjct: 330 EAMDVFRQMQAA-GCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTYNIL 388
Query: 316 INAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDG 137
I +G G +K + L M E++ P++ TY +I+AC +GGL E + M G
Sbjct: 389 IQVFGEGGYFKEVVTLFHDMVEEKVEPNMETYEGLIYACGKGGLH-EDAKRILLHMNGQG 447
Query: 136 IQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITT 11
+ P Y ++ A AL +EA + F MNE G P + T
Sbjct: 448 LVPSSKVYTAVIEAYGQAALYEEAVVAFNTMNEVGSRPVVET 489
Score = 65.9 bits (159), Expect = 2e-08
Identities = 38/147 (25%), Positives = 73/147 (49%)
Frame = -1
Query: 448 PNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSFTALINAYGRNGQYKVSLEL 269
P+ Y+ ++ G+ G L+K +E+ EM A G S V S+ L+ AY G K ++++
Sbjct: 275 PDVTTYSYLVETFGKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLGSMKEAMDV 334
Query: 268 LDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMRHDGIQPDLVTYNTLLGACA 89
+M++ + TY+ +++ + G ++ + LF +M+ +PD TYN L+
Sbjct: 335 FRQMQAAGCVANAETYSILLNLYGKNGR-YDQVRELFLEMKTSNTEPDADTYNILIQVFG 393
Query: 88 SRALGDEAEMVFRGMNEAGIVPDITTH 8
E +F M E + P++ T+
Sbjct: 394 EGGYFKEVVTLFHDMVEEKVEPNMETY 420
Score = 59.7 bits (143), Expect = 1e-06
Identities = 41/166 (24%), Positives = 75/166 (45%)
Frame = -1
Query: 505 DWQRSLRLFKYMQRQIWCKPNEHIYTIMIGLLGREGLLDKCAEVFDEMPAHGVSRSVFSF 326
+W+ L LF M+ + +P+ Y ++ L D+ VF M GV V ++
Sbjct: 222 EWEGLLGLFAEMRHE-GIQPDLVTYNTLLSACSSRELEDEAEMVFRTMNEAGVLPDVTTY 280
Query: 325 TALINAYGRNGQYKVSLELLDRMKSERITPSILTYNTIIHACVRGGLDWEGLLGLFAQMR 146
+ L+ +G+ G+ + ELL M++ +P + +YN ++ A G + + +F QM+
Sbjct: 281 SYLVETFGKLGKLEKVSELLMEMEAGGTSPEVTSYNVLLEAYAHLG-SMKEAMDVFRQMQ 339
Query: 145 HDGIQPDLVTYNTLLGACASRALGDEAEMVFRGMNEAGIVPDITTH 8
G + TY+ LL D+ +F M + PD T+
Sbjct: 340 AAGCVANAETYSILLNLYGKNGRYDQVRELFLEMKTSNTEPDADTY 385