BLASTX nr result
ID: Papaver25_contig00005791
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00005791
(4293 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II su... 2692 0.0
ref|XP_006383037.1| DNA-directed RNA polymerase II largest subun... 2625 0.0
ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II su... 2624 0.0
ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed... 2624 0.0
ref|XP_002530639.1| DNA-directed RNA polymerase II largest subun... 2616 0.0
ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II su... 2615 0.0
ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II su... 2614 0.0
ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II su... 2614 0.0
ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II su... 2614 0.0
ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II su... 2614 0.0
ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citr... 2613 0.0
ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [A... 2606 0.0
ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prun... 2606 0.0
gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus... 2588 0.0
ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II su... 2586 0.0
ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II su... 2586 0.0
ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II su... 2585 0.0
ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 ... 2584 0.0
ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II su... 2584 0.0
ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II su... 2580 0.0
>ref|XP_002285900.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Vitis
vinifera]
Length = 1848
Score = 2692 bits (6978), Expect = 0.0
Identities = 1328/1414 (93%), Positives = 1373/1414 (97%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMRCVCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+Q+I+NPK+RL+K+LDACKNK+KC+GGDEI+ Q D ++PVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQAQKIRNPKNRLKKILDACKNKSKCEGGDEIETQALDSDEPVKKSRGGCGAQQPKLTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYKIQRKK DDPEQLPEPVERKQQL+AERVL+VLKRISDEDCILLGLNPKYAR
Sbjct: 181 EGMKMIAEYKIQRKKNDDPEQLPEPVERKQQLSAERVLNVLKRISDEDCILLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
LLRTSAWHSE+ETGFITPGDTQVRIE+GELL GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRTSAWHSESETGFITPGDTQVRIEKGELLAGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TMEKIN+TISKAKNEVK+LIR AQE+ L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISKAKNEVKELIRAAQERQL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFD+V+++E DD+NW P+YM ++VEDLK IREFR+VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKGEFDRVFKYEIDDENWNPSYMLPEHVEDLKTIREFRNVFDAEVQKLEADRFQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TTGDNSWPMPVNL+RLIWNAQKTFKVD RRPSDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDNSWPMPVNLKRLIWNAQKTFKVDLRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +SMEAQKNATLFFNILLRSTFASKRVLKE+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GDDLISMEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
P+V+KTKERAKNVQCALEYTTLRSVTQATEVWYDPDPM TIIEED+DFVKSYYEMPDEEV
Sbjct: 1141 PDVSKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVN+FDE EGFKP
Sbjct: 1261 NDEAPKGELQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNKFDESEGFKP 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
EVEWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EVEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_006383037.1| DNA-directed RNA polymerase II largest subunit family protein
[Populus trichocarpa] gi|550338614|gb|ERP60834.1|
DNA-directed RNA polymerase II largest subunit family
protein [Populus trichocarpa]
Length = 1837
Score = 2625 bits (6804), Expect = 0.0
Identities = 1297/1416 (91%), Positives = 1353/1416 (95%), Gaps = 2/1416 (0%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD RFP+SPAEVAKVRMVQFGILSPDEIRQMSV+QIEHSETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVIQIEHSETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMRCVCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +IKNPK RL+K+LDACKNKTKC+GGDEIDVQ +D E+PVKKSRGGCGAQQPKLTI
Sbjct: 121 FKQALKIKNPKSRLKKILDACKNKTKCEGGDEIDVQGQDNEEPVKKSRGGCGAQQPKLTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK+QRKK+DD EQLPEPVERKQ LTAERVLSVLKRISDEDC LLGL+PKYAR
Sbjct: 181 EGMKMIAEYKVQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLDPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QER+GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERSGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTI+KPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTIVKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L+RT+AWH ++E G ITPGDT VRIE+GELL+GTLCKK LGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHMDSERGMITPGDTLVRIEKGELLSGTLCKKTLGTSSGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADASTMEKIN+TIS AKNEVKDLIR AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMEKINETISNAKNEVKDLIRKAQNKEL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
E EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFD+V+R+EFDD++W P YM +D+VEDL+NIRE R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKAEFDRVFRYEFDDEDWNPTYMMTDHVEDLRNIRELRDVFDAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPR--RPSDMHPMEIVEAIDKLQERLKV 3103
LGTEI TTGDN+WPMPVNL+RLIWNAQKTFK+D R R SD+HPME VEA+DKLQERLKV
Sbjct: 961 LGTEIATTGDNTWPMPVNLKRLIWNAQKTFKIDTRIGRVSDIHPMEAVEAVDKLQERLKV 1020
Query: 3104 VPGDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVA 3283
VPGDD +S+EAQKNATLFF ILLRST ASKRVL+E+ L+REAFDWVIGE+ESRFLQSLVA
Sbjct: 1021 VPGDDLLSVEAQKNATLFFGILLRSTLASKRVLQEYRLSREAFDWVIGEIESRFLQSLVA 1080
Query: 3284 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 3463
PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY
Sbjct: 1081 PGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVY 1140
Query: 3464 LKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDE 3643
LKPE NKTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPM TIIEED DFVKSYYEMPDE
Sbjct: 1141 LKPEFNKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDE 1200
Query: 3644 EVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIR 3823
EVAPEKISPWLLRIELNREMM+DKKL+MADIAEKIN EFDDDLTCIFNDDNAEKLILRIR
Sbjct: 1201 EVAPEKISPWLLRIELNREMMIDKKLNMADIAEKINHEFDDDLTCIFNDDNAEKLILRIR 1260
Query: 3824 IMNDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGF 4003
IMNDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ KV+ FDE EGF
Sbjct: 1261 IMNDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNAKVSSFDESEGF 1320
Query: 4004 KPEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISF 4183
K EWMLDTEGVNLLAVMC+E+VDA +TTSNHLIEVIEV+GIEAVRRSLLDELRVVISF
Sbjct: 1321 KTTEEWMLDTEGVNLLAVMCNENVDARKTTSNHLIEVIEVIGIEAVRRSLLDELRVVISF 1380
Query: 4184 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 DGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1416
>ref|XP_004169177.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cucumis
sativus]
Length = 1853
Score = 2624 bits (6802), Expect = 0.0
Identities = 1296/1414 (91%), Positives = 1354/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSD RLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VL+IMR VCFNCSKIL DEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RIKNPK+RLRK+LDACKNKTKC+GGDEIDVQ +D ++PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKM AEYK QRKK DDPEQLPEPVERKQ LTAERVL +LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RTSAWHSE+ETG ITPGDT VRIE+GELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TIS AKNEVK+LI+ AQE+SL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EF++++R+EF+D+NW PNYM ++VEDLK IREFR+VF+AEV+KL DR Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TTG+NSWPMPVNL+RLI NAQKTFK+D RR SDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S+EAQKNATLFFNILLRSTFASKRVL E+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PE NKTKERAK VQCALEYTTLRSVTQATEVWYDPDPM TIIEEDIDFVKSYYEMPDEE+
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVN+FDE+EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E+EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_004146161.1| PREDICTED: LOW QUALITY PROTEIN: DNA-directed RNA polymerase II
subunit RPB1-like [Cucumis sativus]
Length = 1832
Score = 2624 bits (6802), Expect = 0.0
Identities = 1296/1414 (91%), Positives = 1354/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GLSD RLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVAGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VL+IMR VCFNCSKIL DEED K
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLTIMRSVCFNCSKILVDEEDPK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RIKNPK+RLRK+LDACKNKTKC+GGDEIDVQ +D ++PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQALRIKNPKNRLRKILDACKNKTKCEGGDEIDVQGQDSDQPVKKSRGGCGAQQPKISI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKM AEYK QRKK DDPEQLPEPVERKQ LTAERVL +LKRI+DEDC LLGLNPKYAR
Sbjct: 181 EGMKMTAEYKAQRKKNDDPEQLPEPVERKQTLTAERVLGILKRITDEDCKLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFI KDVFMN LMWWEDFDGK+PAP ILKP+PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNTLMWWEDFDGKIPAPAILKPQPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RTSAWHSE+ETG ITPGDT VRIE+GELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LTRTSAWHSESETGHITPGDTFVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TIS AKNEVK+LI+ AQE+SL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISAAKNEVKNLIKKAQERSL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMM+SFEN+VNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMDSFENKVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EF++++R+EF+D+NW PNYM ++VEDLK IREFR+VF+AEV+KL DR Q
Sbjct: 901 LDSLKMKKKEFERIFRYEFEDENWKPNYMLPEHVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TTG+NSWPMPVNL+RLI NAQKTFK+D RR SDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961 LGTEIATTGENSWPMPVNLKRLIQNAQKTFKIDFRRASDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S+EAQKNATLFFNILLRSTFASKRVL E+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PE NKTKERAK VQCALEYTTLRSVTQATEVWYDPDPM TIIEEDIDFVKSYYEMPDEE+
Sbjct: 1141 PEANKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDIDFVKSYYEMPDEEI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMA+IAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMANIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVN+FDE+EGFKP
Sbjct: 1261 NDEAPKGELTDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKCGKVNKFDENEGFKP 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E+EWMLDTEGVNLLAVM HEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EMEWMLDTEGVNLLAVMTHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_002530639.1| DNA-directed RNA polymerase II largest subunit, putative [Ricinus
communis] gi|223529812|gb|EEF31747.1| DNA-directed RNA
polymerase II largest subunit, putative [Ricinus
communis]
Length = 1855
Score = 2616 bits (6780), Expect = 0.0
Identities = 1285/1414 (90%), Positives = 1348/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MDMRFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIE SETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEFSETTERGKPKPGGLSDLRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGF+K VLSIMRCVCFNCSKILADEEDHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEEDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +IKNPK+RL+K+LDACKNKTKC+GGD+IDV +D ++PVKKSRGGCGAQQP++TI
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKTKCEGGDDIDVHSQDTDEPVKKSRGGCGAQQPRMTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK DD EQLPEPVERKQ LTAERVL VLKRISD+DC LLG NPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDDDCRLLGFNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL+KQE+ GAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKKQEKGGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L+RT+AWHS++E G ITPGDT VRIE+GELL+GT+CKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LIRTAAWHSDSERGVITPGDTLVRIEKGELLSGTVCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQNGFSIGIGDTIADA+TMEKIN+TIS AKN VK+LIR AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADAATMEKINETISNAKNAVKELIRKAQNKEL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EP+PGRTMMESFEN VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPKPGRTMMESFENEVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFD+V+++E DD+NW P YM D+++DLKNIRE R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKSEFDRVFKYELDDENWNPTYMYQDHIDDLKNIRELRDVFDAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TTGD+SWP+PVNLRRLIWNAQKTFKVD RRPSD+HPME VEA+DKLQERLKVVP
Sbjct: 961 LGTEIATTGDSSWPLPVNLRRLIWNAQKTFKVDKRRPSDIHPMEAVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +S+EAQKNATLFF ILLRST ASKRVL+++ LTREAFDWVIGE+ESRFLQSLVAPG
Sbjct: 1021 GDDPLSVEAQKNATLFFGILLRSTLASKRVLEDYRLTREAFDWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLS++L
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSIFLI 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPM TIIEED+DFVKSYYEMPDEE+
Sbjct: 1141 PECNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
+PEKISPWLLRIELNREMMVDKKL+MADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 SPEKISPWLLRIELNREMMVDKKLNMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK KV++FDE+EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKQSKVSKFDENEGFKT 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
EWMLDTEGVNLLAVMC+E+VDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 IEEWMLDTEGVNLLAVMCNENVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_004287766.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Fragaria
vesca subsp. vesca]
Length = 1842
Score = 2615 bits (6779), Expect = 0.0
Identities = 1292/1414 (91%), Positives = 1348/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFPFSP EVAKVR VQFGILSPDEIRQMSVVQIEHSET GKPK GLSD RLGTI
Sbjct: 1 MDIRFPFSPCEVAKVRRVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMRCVCFNCSKIL DE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FK + RIKNPK+RL+K+LDACKNKTKC+GGDEIDVQD D +P+KKSRGGCGAQQPKLTI
Sbjct: 121 FKTALRIKNPKNRLKKILDACKNKTKCEGGDEIDVQDTD--EPLKKSRGGCGAQQPKLTI 178
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
+GMKM+AEYK QRKK+DD EQLPEPVERKQ LTAERVLSVLKRISDEDC LLGLNPKYAR
Sbjct: 179 DGMKMVAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKYAR 238
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 239 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 298
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 299 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 358
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 359 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 418
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 419 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 478
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 479 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 538
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 539 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 598
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RTSAWHSE+ETG ITPGDT VRIE+GELL+GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 599 LQRTSAWHSESETGNITPGDTHVRIEKGELLSGTLCKKALGTSTGSLIHVIWEEVGPDAA 658
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TISKAKNEVK+LI AQ KSL
Sbjct: 659 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKELISKAQSKSL 718
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 719 EPEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 778
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 779 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 838
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 839 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 898
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFDK + + FDD+NW P+YM ++VEDLK IREFR+VFDAEV KL DRLQ
Sbjct: 899 LDSLKMKKKEFDKTFAYVFDDENWNPDYMLPEHVEDLKTIREFRNVFDAEVSKLETDRLQ 958
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TGDNSWP+PVNL+RLIWNAQKTFK+D RR SDMHPMEIVEAIDKLQERL+VVP
Sbjct: 959 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLRVVP 1018
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +S+EAQKNATLFFNILLRSTFASKRVL+E+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1019 GDDLLSVEAQKNATLFFNILLRSTFASKRVLEEYRLTREAFEWVIGEIESRFLQSLVAPG 1078
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1079 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1138
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPM T+IEED+DFV+SYYEMPDEEV
Sbjct: 1139 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDLDFVRSYYEMPDEEV 1198
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFD DLTCIFNDDNAEKLILRIRIM
Sbjct: 1199 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDGDLTCIFNDDNAEKLILRIRIM 1258
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
N+E PKG+S DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVN+FD++EGFK
Sbjct: 1259 NEETPKGDSQDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDQNEGFKA 1318
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAV+CH+DVDA RTTSNHLIE+IEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1319 EQEWMLDTEGVNLLAVLCHDDVDAKRTTSNHLIEIIEVLGIEAVRRSLLDELRVVISFDG 1378
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1379 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1412
>ref|XP_006467031.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X5
[Citrus sinensis]
Length = 1963
Score = 2614 bits (6775), Expect = 0.0
Identities = 1281/1414 (90%), Positives = 1347/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMR VCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +I+NPK+RL+K+LDACKNKTKC+GGDEIDV +D E+P+KK++GGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK DD EQLPEPVERKQ LTAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RT+AWH++N+ G +T GDT VRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TME INDTISKAKN VK+LI+ AQ+KSL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMMESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFDK +RFE D++NW PNYM +Y++DLK I+E R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
L TEI T+GD+SWP+PVNL+RLIWNAQKTFKVDPRRPSDMHPME+VEA+DKLQERLKVVP
Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S+EAQKNATLFFNILLRSTFASKRVLKEH LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMGTIIEED++FVKSYYEMPDE++
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GK ++D++EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_006467030.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X4
[Citrus sinensis]
Length = 1853
Score = 2614 bits (6775), Expect = 0.0
Identities = 1281/1414 (90%), Positives = 1347/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMR VCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +I+NPK+RL+K+LDACKNKTKC+GGDEIDV +D E+P+KK++GGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK DD EQLPEPVERKQ LTAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RT+AWH++N+ G +T GDT VRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TME INDTISKAKN VK+LI+ AQ+KSL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMMESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFDK +RFE D++NW PNYM +Y++DLK I+E R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
L TEI T+GD+SWP+PVNL+RLIWNAQKTFKVDPRRPSDMHPME+VEA+DKLQERLKVVP
Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S+EAQKNATLFFNILLRSTFASKRVLKEH LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMGTIIEED++FVKSYYEMPDE++
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GK ++D++EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_006467029.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X3
[Citrus sinensis]
Length = 1790
Score = 2614 bits (6775), Expect = 0.0
Identities = 1281/1414 (90%), Positives = 1347/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMR VCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +I+NPK+RL+K+LDACKNKTKC+GGDEIDV +D E+P+KK++GGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK DD EQLPEPVERKQ LTAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RT+AWH++N+ G +T GDT VRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TME INDTISKAKN VK+LI+ AQ+KSL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMMESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFDK +RFE D++NW PNYM +Y++DLK I+E R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
L TEI T+GD+SWP+PVNL+RLIWNAQKTFKVDPRRPSDMHPME+VEA+DKLQERLKVVP
Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S+EAQKNATLFFNILLRSTFASKRVLKEH LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMGTIIEED++FVKSYYEMPDE++
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GK ++D++EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_006467027.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like isoform X1
[Citrus sinensis] gi|568825318|ref|XP_006467028.1|
PREDICTED: DNA-directed RNA polymerase II subunit 1-like
isoform X2 [Citrus sinensis]
Length = 1860
Score = 2614 bits (6775), Expect = 0.0
Identities = 1281/1414 (90%), Positives = 1347/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMR VCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +I+NPK+RL+K+LDACKNKTKC+GGDEIDV +D E+P+KK++GGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKNKGGCGAQQPKLTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK DD EQLPEPVERKQ LTAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RT+AWH++N+ G +T GDT VRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TME INDTISKAKN VK+LI+ AQ+KSL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMMESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFDK +RFE D++NW PNYM +Y++DLK I+E R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
L TEI T+GD+SWP+PVNL+RLIWNAQKTFKVDPRRPSDMHPME+VEA+DKLQERLKVVP
Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S+EAQKNATLFFNILLRSTFASKRVLKEH LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMGTIIEED++FVKSYYEMPDE++
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GK ++D++EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_006425357.1| hypothetical protein CICLE_v10024686mg [Citrus clementina]
gi|557527347|gb|ESR38597.1| hypothetical protein
CICLE_v10024686mg [Citrus clementina]
Length = 1860
Score = 2613 bits (6774), Expect = 0.0
Identities = 1281/1414 (90%), Positives = 1346/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDTRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMR VCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRSVCFNCSKILADEDDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +I+NPK+RL+K+LDACKNKTKC+GGDEIDV +D E+P+KK +GGCGAQQPKLTI
Sbjct: 121 FKQALKIRNPKNRLKKILDACKNKTKCEGGDEIDVPGQDGEEPLKKKKGGCGAQQPKLTI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK DD EQLPEPVERKQ LTAERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKNDDQEQLPEPVERKQTLTAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVP PTILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPQPTILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RT+AWH++N+ G +T GDT VRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LFRTAAWHADNDKGILTAGDTLVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA TME INDTISKAKN VK+LI+ AQ+KSL
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAKTMETINDTISKAKNNVKNLIKQAQDKSL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMMESFEN+VNQVLN ARD+AGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNTARDEAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQT 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFDK +RFE D++NW PNYM +Y++DLK I+E R VFDAEV+KL DR Q
Sbjct: 901 LDSLKMKKSEFDKAFRFEMDEENWNPNYMLQEYIDDLKTIKELRDVFDAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
L TEI T+GD+SWP+PVNL+RLIWNAQKTFKVDPRRPSDMHPME+VEA+DKLQERLKVVP
Sbjct: 961 LATEIATSGDSSWPLPVNLKRLIWNAQKTFKVDPRRPSDMHPMEVVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S+EAQKNATLFFNILLRSTFASKRVLKEH LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GEDPLSVEAQKNATLFFNILLRSTFASKRVLKEHRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV+LK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVFLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
P VN TKERAKNVQCALEYTTLRSVT+ATEVWYDPDPMGTIIEED++FVKSYYEMPDE++
Sbjct: 1141 PGVNSTKERAKNVQCALEYTTLRSVTEATEVWYDPDPMGTIIEEDVEFVKSYYEMPDEDI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
APEKISPWLLRIELNREMMVDKKLSMA +AEKIN EFDDDLTCIFNDDNA+KLILRIRIM
Sbjct: 1201 APEKISPWLLRIELNREMMVDKKLSMAAVAEKINQEFDDDLTCIFNDDNADKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GK ++D++EGFK
Sbjct: 1261 NDEAPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKKGKTTKYDDNEGFKS 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIE+IEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 EDEWMLDTEGVNLLAVMCHEDVDARRTTSNHLIEIIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_006828844.1| hypothetical protein AMTR_s00001p00152770 [Amborella trichopoda]
gi|548833823|gb|ERM96260.1| hypothetical protein
AMTR_s00001p00152770 [Amborella trichopoda]
Length = 1844
Score = 2606 bits (6755), Expect = 0.0
Identities = 1285/1417 (90%), Positives = 1357/1417 (95%), Gaps = 3/1417 (0%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MDMRFP+SPAEVAKVR+VQFGILSP+EIR MSVV+I+HSET ERGKPKP GLSD RLGTI
Sbjct: 1 MDMRFPYSPAEVAKVRVVQFGILSPEEIRNMSVVEIQHSETMERGKPKPSGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKC+TCTANMAECPGHFGHLELAKPMFHIGF+K VLSIMRCVCFNCS+ILADEEDH+
Sbjct: 61 DRKMKCDTCTANMAECPGHFGHLELAKPMFHIGFLKTVLSIMRCVCFNCSRILADEEDHR 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDV-QDEDLEKPVKKSR-GGCGAQQPKL 583
FKQ+ +I+NPK RL+KVLD CKNKTKC+GGD+ID Q +D E+ VKK R GGCGAQQPK+
Sbjct: 121 FKQALKIRNPKTRLKKVLDCCKNKTKCEGGDDIDEDQAQDSEEVVKKKRHGGCGAQQPKI 180
Query: 584 TIEGMKMIAEYKIQRKKTDDPEQ-LPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPK 760
TIEGMKM+AEYK+ RKK D+ EQ LPEPVERKQQL AE+VL+VLKRI+DEDC LLGLNPK
Sbjct: 181 TIEGMKMVAEYKLPRKKNDEQEQMLPEPVERKQQLAAEKVLNVLKRITDEDCQLLGLNPK 240
Query: 761 YARPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAH 940
YARPDWMILQV+ SVMMDTS+RSEDDLTHQLAM+IRHNENL++QE+NGAPAH
Sbjct: 241 YARPDWMILQVMPIPPPPVRPSVMMDTSSRSEDDLTHQLAMVIRHNENLKRQEKNGAPAH 300
Query: 941 IISEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 1120
IISEFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF
Sbjct: 301 IISEFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDF 360
Query: 1121 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKY 1300
SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKY
Sbjct: 361 SARTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKY 420
Query: 1301 IIREDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 1480
IIREDGQRLDLRYLKKS DHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP
Sbjct: 421 IIREDGQRLDLRYLKKSGDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMP 480
Query: 1481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 1660
YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV
Sbjct: 481 YSTFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIV 540
Query: 1661 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPK 1840
QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGK+PAP ILKPRPLWTGKQVFNLIIPK
Sbjct: 541 QDTLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKIPAPAILKPRPLWTGKQVFNLIIPK 600
Query: 1841 QINLLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGP 2020
QINL+R SAWHSE+E+GFITPGDT VRIERGELL+GTLCKK LGTS+GSLIHVIWEEVGP
Sbjct: 601 QINLIRYSAWHSESESGFITPGDTCVRIERGELLSGTLCKKTLGTSSGSLIHVIWEEVGP 660
Query: 2021 DAARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQE 2200
DAARKFLGHTQWLVNYWLLQ FSIGIGDTIADA+TMEKIN+TISKAKNEVK+LI+ AQE
Sbjct: 661 DAARKFLGHTQWLVNYWLLQQAFSIGIGDTIADAATMEKINETISKAKNEVKELIKAAQE 720
Query: 2201 KSLEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 2380
K LE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS
Sbjct: 721 KQLEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINIS 780
Query: 2381 QMTACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 2560
QMTACVGQQNVEGKRIP+GF DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG
Sbjct: 781 QMTACVGQQNVEGKRIPFGFNDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMG 840
Query: 2561 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 2740
GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE
Sbjct: 841 GREGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE 900
Query: 2741 SQKLDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADD 2920
SQKLDSLKMK+ EF+ VY++E D +NW+P+YM ++VEDLK IREF++VFDAEV+KL D
Sbjct: 901 SQKLDSLKMKRAEFENVYKYEIDQENWSPSYMLPEHVEDLKTIREFQNVFDAEVQKLEAD 960
Query: 2921 RLQLGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLK 3100
R QLGTEITTTGDNSWPMPVNL+RLIWNAQK FKVD RRPSDMHPMEIVEA+DKLQERLK
Sbjct: 961 RHQLGTEITTTGDNSWPMPVNLKRLIWNAQKMFKVDLRRPSDMHPMEIVEAVDKLQERLK 1020
Query: 3101 VVPGDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLV 3280
VVPGDD MS+EAQKNATLFFNILLRSTFASKRVLKE+ LTREAFDWVIGE+ESRFLQSLV
Sbjct: 1021 VVPGDDLMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTREAFDWVIGEIESRFLQSLV 1080
Query: 3281 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 3460
APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV
Sbjct: 1081 APGEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSV 1140
Query: 3461 YLKPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPD 3640
YLK EVNKTKE+AKNVQCALEYTTLRSVT+ATEVWYDPDPM TIIEED+DFV+SYYEMPD
Sbjct: 1141 YLKHEVNKTKEKAKNVQCALEYTTLRSVTEATEVWYDPDPMSTIIEEDVDFVRSYYEMPD 1200
Query: 3641 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 3820
EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI
Sbjct: 1201 EEVAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRI 1260
Query: 3821 RIMNDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEG 4000
RIMNDEAPKGE DES+EDDVFLKKIESNMLTEMALRGIPDINKVFIKSGK+N+FDE+EG
Sbjct: 1261 RIMNDEAPKGELQDESSEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKINKFDENEG 1320
Query: 4001 FKPEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVIS 4180
FKPE+EWMLDTEGVNLLAVMC+E+VDATRTTSNHLIEVI+VLGIEAVRR+LLDELRVVIS
Sbjct: 1321 FKPEIEWMLDTEGVNLLAVMCNEEVDATRTTSNHLIEVIQVLGIEAVRRALLDELRVVIS 1380
Query: 4181 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 FDGSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1417
>ref|XP_007203058.1| hypothetical protein PRUPE_ppa000093mg [Prunus persica]
gi|462398589|gb|EMJ04257.1| hypothetical protein
PRUPE_ppa000093mg [Prunus persica]
Length = 1844
Score = 2606 bits (6754), Expect = 0.0
Identities = 1291/1414 (91%), Positives = 1343/1414 (94%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFPFSPAEVAKVR VQFGILSPDEIRQMSVVQIEHSET GKPK GLSD RLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRCVQFGILSPDEIRQMSVVQIEHSETMLGGKPKTAGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMRCVCFNCSKIL DE+DHK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILVDEDDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RIK+PK+RL+K+LDACKNKTKCDGGDEIDVQ ++ E+PVKKSRGGCGAQQPKL+I
Sbjct: 121 FKQALRIKSPKNRLKKILDACKNKTKCDGGDEIDVQGQESEEPVKKSRGGCGAQQPKLSI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKM AEYK QRKK+DD EQLPEPVERKQ LTAERVLSVLKRISDED LLGLNPKYAR
Sbjct: 181 EGMKMNAEYKAQRKKSDDQEQLPEPVERKQTLTAERVLSVLKRISDEDSQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPQPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGSPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDP INID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPNINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L RTSAWHSE E+G ITPGDT VRIE+GELL GTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LQRTSAWHSEAESGNITPGDTFVRIEKGELLAGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TISKAKNEVKDLI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKNEVKDLISKAQSKQL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
E EPGRTMM+SFEN+VNQVLN+ARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENKVNQVLNRARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFDK + +E DD+NW P+YM ++VEDLK IREFR+VFDAEV+KL DRLQ
Sbjct: 901 LDSLKMKKSEFDKTFSYELDDENWNPDYMLHEHVEDLKTIREFRNVFDAEVQKLETDRLQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TGDNSWP+PVNL+RLIWNAQKTFK+D RR SDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNLKRLIWNAQKTFKIDFRRTSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +S+EAQKNATLFF+ILLRSTFASKRVL E+ LTREAF+WVIGE+ESRFLQSLVAPG
Sbjct: 1021 GDDLLSVEAQKNATLFFSILLRSTFASKRVLDEYRLTREAFEWVIGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PE NKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPM TIIEED+DFV SYYEMPDEEV
Sbjct: 1141 PEANKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVNSYYEMPDEEV 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 NPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
N EAPKGE +DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK GKVN+FD +EGFK
Sbjct: 1261 NAEAPKGELVDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHGKVNKFDPNEGFKA 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAV+CH+DVDA RTTSNHLIE++E+LGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 EQEWMLDTEGVNLLAVLCHDDVDARRTTSNHLIEILEILGIEAVRRSLLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>gb|EYU42342.1| hypothetical protein MIMGU_mgv1a000091mg [Mimulus guttatus]
Length = 1842
Score = 2588 bits (6709), Expect = 0.0
Identities = 1273/1414 (90%), Positives = 1343/1414 (94%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFPFSPAEVAKVR+VQFGILSPDEIRQMSVV IEHSETTERGKPK GGLSD RLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRVVQFGILSPDEIRQMSVVHIEHSETTERGKPKIGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMKIVLSI+RCVCFNCSKILADEE+ K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKIVLSILRCVCFNCSKILADEEEPK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RI+NPK+RLRK+LDACKNKTKCDGGDEID +D E+PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQAMRIRNPKNRLRKILDACKNKTKCDGGDEIDGHSQDTEEPVKKSRGGCGAQQPKISI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
+GMKM+AEYK+Q+KK+DD +Q+PEPVERKQQL+AE+VLS+LKRI+DEDC LLGLNPK+AR
Sbjct: 181 DGMKMVAEYKLQKKKSDDQDQMPEPVERKQQLSAEKVLSILKRITDEDCQLLGLNPKFAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTSARSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSARSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFH+ATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVE GPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVENGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
LLR SAWH E E GFITPGDTQVRIE+GELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHQETEKGFITPGDTQVRIEKGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FS+GIGDTIADA+TMEKIN+TIS AKNEVK+LIR AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSMGIGDTIADAATMEKINETISNAKNEVKELIRAAQEKQL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GF+DRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFVDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQP 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
L+SLK+KK +F+ +Y++E D+ NW PNYM + VEDLK IRE R VFDAEV KL DR Q
Sbjct: 901 LESLKLKKSDFNDMYKYEIDNSNWNPNYMLPEAVEDLKTIREIRSVFDAEVTKLEVDRFQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TTGDNSWP+PVN++RL+ NAQKTFKVD RRPSDMHPMEIVEA+DKLQERLKVV
Sbjct: 961 LGTEIATTGDNSWPLPVNIKRLVLNAQKTFKVDFRRPSDMHPMEIVEAVDKLQERLKVVV 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +S EAQKNATLFFNILLRS ASKRVLKE+ LTREAF+WVIGE+ESRFLQSLVA G
Sbjct: 1021 GDDYLSTEAQKNATLFFNILLRSALASKRVLKEYRLTREAFEWVIGEIESRFLQSLVAAG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
P+V+KTKE+AKNVQCALEYTTLRSVTQATEVWYDPDPM TIIEED++FVKSYYEMPDEE+
Sbjct: 1141 PDVSKTKEKAKNVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVEFVKSYYEMPDEEI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
P+KISPWLLRIELNREMMVDKKLSMADIAEKIN EF DDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINTEFSDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
N++APKGE DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK+ K+N+FDE++GFK
Sbjct: 1261 NEQAPKGELADESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKNSKLNKFDENDGFKA 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVMCHE+VD RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 ENEWMLDTEGVNLLAVMCHEEVDVRRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_006590737.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Glycine
max]
Length = 1827
Score = 2586 bits (6703), Expect = 0.0
Identities = 1278/1414 (90%), Positives = 1340/1414 (94%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GGLSD RLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRK+KCETCTA+MAECPGHFGHLELAKPMFHIGF+K VL+IMRCVCFNCSKILADE DHK
Sbjct: 61 DRKLKCETCTASMAECPGHFGHLELAKPMFHIGFLKTVLTIMRCVCFNCSKILADENDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RI+NPK+RL+K+LDACKNK+KC+GGDEID+ +D ++PVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALRIRNPKNRLKKILDACKNKSKCEGGDEIDIPGQDTDEPVKKSRGGCGAQQPKITI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK+DD EQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVPAP ILKP PLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFITKDVFMNILMWWEDFDGKVPAPAILKPEPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L+R S+WHSE+E G ITPGDT VRIE+GELLTGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LIRYSSWHSESERGSITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADASTME IN TIS AK +VK LIR AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISAAKEKVKQLIREAQEKKL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
E EPGRTMM+SFENRVNQ LN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMDSFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK EFD+V+R+EFDD+NW P YM + VEDLK IREFR+VF+AEV+KL DR Q
Sbjct: 901 LDSLKMKKTEFDRVFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLEADRYQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
L TEI TTGD+S P+PVNL+RLIWNAQKTFKVD RRPSDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961 LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
G+D +S EAQKNATL FNILLRSTFASKRVL+E+ L+REAF+WV+GE+ESRFLQSLVA G
Sbjct: 1021 GEDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYL+
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLR 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
+V KTKERAK+VQCALEYTTLRSVTQATEVWYDPDPM TIIEED DFVKSYYEMPDEEV
Sbjct: 1141 SDVGKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDADFVKSYYEMPDEEV 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
A EKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEM LRGIPDINKVFIK+ KV +FDE++GFKP
Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIPDINKVFIKNTKVQKFDENQGFKP 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRR+LLDELRVVISFDG
Sbjct: 1321 NEEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRALLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_004232527.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1 [Solanum
lycopersicum]
Length = 1846
Score = 2586 bits (6702), Expect = 0.0
Identities = 1271/1414 (89%), Positives = 1346/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFPFSPAEVAKVR VQFGI+SPDEIRQMSVV IEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE+D K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RI+NPK+RLRK+LDACKNKTKC+GGDEIDVQ +D E+PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKISI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
+GMKM+AEYK+Q+KK+DDPEQ+PEPVERKQQL+AERVLS+LKR+SDEDC+LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
LLR SAWH+++E G+ITPGDTQVRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQ FSIGIGDTIADASTMEKIN+TIS AK +VK+LI+ AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
E EPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLK KK FD +Y +E DD NW P+YM + VEDLK IRE R VFDAEV+KL DR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TGDNSWP+PVN++RL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +SMEAQKNATLFFNILLRS ASKRVLKE+ L+REAF+WV+GE+ESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPM T+IEED++FVKSYYEMPDEE+
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
P+KISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE LDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ KV +FD++EGFK
Sbjct: 1261 NDEAPKGE-LDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVM HEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1413
>ref|XP_004512182.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like [Cicer
arietinum]
Length = 1834
Score = 2585 bits (6700), Expect = 0.0
Identities = 1279/1414 (90%), Positives = 1340/1414 (94%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GGLSD RLGTI
Sbjct: 1 MDIRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKIGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTA+MAECPGHFG+LELAKPMFHIGF+K VLSIMRCVCFNCSKILADE+DHK
Sbjct: 61 DRKMKCETCTASMAECPGHFGYLELAKPMFHIGFLKTVLSIMRCVCFNCSKILADEQDHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RIK+PK+RLRK+LDACKNKTKC+GGD+ID+ D E+PVKKSRGGCGAQQPK+TI
Sbjct: 121 FKQALRIKSPKNRLRKILDACKNKTKCEGGDDIDMPGHDTEEPVKKSRGGCGAQQPKITI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
EGMKMIAEYK QRKK+DD EQLPEPVERKQ L+AERVL VLKRISDEDC LLGLNPKYAR
Sbjct: 181 EGMKMIAEYKAQRKKSDDQEQLPEPVERKQTLSAERVLGVLKRISDEDCQLLGLNPKYAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDW+ILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNG+PAHIIS
Sbjct: 241 PDWLILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGSPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD+
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDS 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFI KDVFMNILMWWEDFDGKVP PTILKP P+WTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFISKDVFMNILMWWEDFDGKVPTPTILKPEPMWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
L+R S+WH+ENE G ITPGDT VRIE+GELLTGTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LIRYSSWHNENEKGPITPGDTMVRIEKGELLTGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADASTME IN TIS+AK +VK LIR AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADASTMETINQTISQAKEKVKQLIREAQEKKL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
E EPGRTMMESFENRVNQ LN+ARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQTLNRARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIETQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLKMKK +FD+ +R+EFDD+NW P YM + VEDLK IREFR+VF+AEV+KL DR Q
Sbjct: 901 LDSLKMKKADFDRAFRYEFDDENWKPTYMLEEPVEDLKTIREFRNVFEAEVQKLDADRFQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
L TEI TTGD+S P+PVNL+RLIWNAQKTFKVD RRPSDMHPMEIVEAIDKLQERLKVVP
Sbjct: 961 LATEIATTGDSSLPLPVNLKRLIWNAQKTFKVDFRRPSDMHPMEIVEAIDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +S EAQKNATL FNILLRSTFASKRVL+E+ L+REAF+WV+GE+ESRFLQSLVA G
Sbjct: 1021 GDDLLSQEAQKNATLLFNILLRSTFASKRVLEEYRLSREAFEWVVGEIESRFLQSLVASG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAK+IKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKRIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PEV KTKERAK+VQCALEYTTLRSVTQATEVWYDPDPM TIIEED+DFVKSYYEMPDEEV
Sbjct: 1141 PEVCKTKERAKSVQCALEYTTLRSVTQATEVWYDPDPMSTIIEEDVDFVKSYYEMPDEEV 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
A EKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 ALEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE DESAEDDVFLKKIESNMLTEM LRGI DINKVFIK+ K+ +FDE+EGFKP
Sbjct: 1261 NDEAPKGEIQDESAEDDVFLKKIESNMLTEMTLRGIADINKVFIKNTKIQKFDENEGFKP 1320
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
EWMLDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1321 YEEWMLDTEGVNLLAVMCHEDVDAKRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1380
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414
>ref|XP_007046584.1| DNA-directed RNA polymerase II subunit RPB1 isoform 1 [Theobroma
cacao] gi|590702281|ref|XP_007046585.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|590702285|ref|XP_007046586.1| DNA-directed RNA
polymerase II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698845|gb|EOX90741.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698846|gb|EOX90742.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
gi|508698847|gb|EOX90743.1| DNA-directed RNA polymerase
II subunit RPB1 isoform 1 [Theobroma cacao]
Length = 1861
Score = 2584 bits (6698), Expect = 0.0
Identities = 1275/1415 (90%), Positives = 1344/1415 (94%), Gaps = 1/1415 (0%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFP+SPAEVAKVRMVQFGILSPDEIRQMSVVQIEH ETTERGKPK GGLSD RLGTI
Sbjct: 1 MDLRFPYSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHGETTERGKPKVGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMK VLSIMRCVCFNCSKILADEE+HK
Sbjct: 61 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKTVLSIMRCVCFNCSKILADEEEHK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ +IKNPK+RL+K+LDACKNK+KC+GGDEIDVQ +D E+PVKKSRGGCGAQQPKL+I
Sbjct: 121 FKQALKIKNPKNRLKKILDACKNKSKCEGGDEIDVQGQDTEEPVKKSRGGCGAQQPKLSI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
+GMKMIAEYK QRK+ DD EQLPEPVERKQ LTAERVLSVLKRISDEDC LLGLNPK+AR
Sbjct: 181 DGMKMIAEYKPQRKRNDDQEQLPEPVERKQTLTAERVLSVLKRISDEDCQLLGLNPKFAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQVL SVMMDTS+RSEDDLTH LAMIIRHNENLR+QERNG+PAHIIS
Sbjct: 241 PDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHALAMIIRHNENLRRQERNGSPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFH+ATYFDNELPG PRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHVATYFDNELPGLPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRI+IMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIRIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPAILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
LLR SAWHSE ETGFITPGDTQVRIE+GELL+GTLCKKALGTS+GSLIHVIWEEVGPDAA
Sbjct: 601 LLRNSAWHSETETGFITPGDTQVRIEKGELLSGTLCKKALGTSSGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQN FSIGIGDTIADA+TMEKIN+TISKAK EVK+LI AQ K L
Sbjct: 661 RKFLGHTQWLVNYWLLQNAFSIGIGDTIADAATMEKINETISKAKEEVKNLIVKAQNKDL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
EPEPGRTMMESFEN+VNQVLNKARDDAG+SAQKSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EPEPGRTMMESFENKVNQVLNKARDDAGNSAQKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIESQK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIESQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTP-NYMQSDYVEDLKNIREFRHVFDAEVKKLADDRL 2926
LDSLKMKK EFD+V+R+ DD++W P +YM +++EDL+ I+E R VF+AEV+KL DR
Sbjct: 901 LDSLKMKKSEFDRVFRYNIDDESWNPTSYMLPEHIEDLRTIQELRDVFEAEVQKLDADRY 960
Query: 2927 QLGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVV 3106
QLGTEI TGD++WP+PVNL+RLIWNAQKTFKVD RR SD+HP+EIV+++DKLQERLKVV
Sbjct: 961 QLGTEIAVTGDSNWPLPVNLKRLIWNAQKTFKVDFRRVSDLHPVEIVDSVDKLQERLKVV 1020
Query: 3107 PGDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAP 3286
PG D +S+EAQKNATLFF+ILLRST ASKRVL+E+ LT+EAF+WVIGE+ESRFLQSLVAP
Sbjct: 1021 PGTDPLSVEAQKNATLFFSILLRSTLASKRVLQEYRLTKEAFEWVIGEIESRFLQSLVAP 1080
Query: 3287 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3466
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1081 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1140
Query: 3467 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEE 3646
PE +KTKE+AKNVQCALEYTTLRSVT ATEVWYDPDP TIIEEDIDFVKSYYEMPDEE
Sbjct: 1141 SPEASKTKEKAKNVQCALEYTTLRSVTHATEVWYDPDPTSTIIEEDIDFVKSYYEMPDEE 1200
Query: 3647 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 3826
VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI
Sbjct: 1201 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 1260
Query: 3827 MNDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFK 4006
MNDE PKGE DESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK K ++FDE +G+K
Sbjct: 1261 MNDEGPKGELNDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKHSKASKFDEADGYK 1320
Query: 4007 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4186
EW+LDTEGVNLLAVMCHEDVDA RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1321 TGEEWVLDTEGVNLLAVMCHEDVDARRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1380
Query: 4187 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1381 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1415
>ref|XP_006340787.1| PREDICTED: DNA-directed RNA polymerase II subunit 1-like [Solanum
tuberosum]
Length = 1839
Score = 2584 bits (6697), Expect = 0.0
Identities = 1270/1414 (89%), Positives = 1345/1414 (95%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD+RFPFSPAEVAKVR VQFGI+SPDEIRQMSVV IEH ETTERGKPKPGGLSD RLGTI
Sbjct: 1 MDLRFPFSPAEVAKVRTVQFGIVSPDEIRQMSVVHIEHGETTERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRKMKCETC ANMAECPGHFGHLELAKPMFHIGFMK VLSI+RCVCFNCSKILADE+D K
Sbjct: 61 DRKMKCETCMANMAECPGHFGHLELAKPMFHIGFMKPVLSILRCVCFNCSKILADEDDPK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDEDLEKPVKKSRGGCGAQQPKLTI 589
FKQ+ RI+NPK+RLRK+LDACKNKTKC+GGDEIDVQ D E+PVKKSRGGCGAQQPK++I
Sbjct: 121 FKQAMRIRNPKNRLRKMLDACKNKTKCEGGDEIDVQGHDTEEPVKKSRGGCGAQQPKISI 180
Query: 590 EGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYAR 769
+GMKM+AEYK+Q+KK+DDPEQ+PEPVERKQQL+AERVLS+LKR+SDEDC+LLGLNP++AR
Sbjct: 181 DGMKMVAEYKMQKKKSDDPEQMPEPVERKQQLSAERVLSILKRVSDEDCLLLGLNPEFAR 240
Query: 770 PDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHIIS 949
PDWMILQ L SVMMDTS+RSEDDLTHQLAMIIRHNENL++QERNGAPAHIIS
Sbjct: 241 PDWMILQALPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLKRQERNGAPAHIIS 300
Query: 950 EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSAR 1129
EFAQLLQFHIATYFDN+LPGQPRATQRSGRPIKSICSRLK+KEGRIRGNLMGKRVDFSAR
Sbjct: 301 EFAQLLQFHIATYFDNDLPGQPRATQRSGRPIKSICSRLKSKEGRIRGNLMGKRVDFSAR 360
Query: 1130 TVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYIIR 1309
TVITPDPTINID+LGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYIIR
Sbjct: 361 TVITPDPTINIDQLGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYIIR 420
Query: 1310 EDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 1489
+DGQRLDLRYLKKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST
Sbjct: 421 DDGQRLDLRYLKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYST 480
Query: 1490 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQDT 1669
FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQ+NRPVMGIVQDT
Sbjct: 481 FRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQANRPVMGIVQDT 540
Query: 1670 LLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQIN 1849
LLGCRK+TKRDTFIEKDVFMNILMWWEDFDGKVPAP ILKPRPLWTGKQVFNLIIPKQIN
Sbjct: 541 LLGCRKVTKRDTFIEKDVFMNILMWWEDFDGKVPAPVILKPRPLWTGKQVFNLIIPKQIN 600
Query: 1850 LLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDAA 2029
LLR SAWH+++E G+ITPGDTQVRIE+GELL+GTLCKK LGTSTGSLIHVIWEEVGPDAA
Sbjct: 601 LLRYSAWHNDSEKGYITPGDTQVRIEKGELLSGTLCKKTLGTSTGSLIHVIWEEVGPDAA 660
Query: 2030 RKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKSL 2209
RKFLGHTQWLVNYWLLQ FSIGIGDTIADASTMEKIN+TIS AK +VK+LI+ AQEK L
Sbjct: 661 RKFLGHTQWLVNYWLLQQAFSIGIGDTIADASTMEKINETISNAKAKVKELIKAAQEKLL 720
Query: 2210 EPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQMT 2389
E EPGRTMMESFENRVNQVLNKARDDAGSSA+KSLSESNNLKAMVTAGSKGSFINISQMT
Sbjct: 721 EAEPGRTMMESFENRVNQVLNKARDDAGSSAEKSLSESNNLKAMVTAGSKGSFINISQMT 780
Query: 2390 ACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 2569
ACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE
Sbjct: 781 ACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGRE 840
Query: 2570 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQK 2749
GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMD+VWIE+QK
Sbjct: 841 GLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDSVWIETQK 900
Query: 2750 LDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRLQ 2929
LDSLK KK FD +Y +E DD NW P+YM + VEDLK IRE R VFDAEV+KL DR Q
Sbjct: 901 LDSLKAKKGTFDDMYAYEIDDPNWNPSYMLPEAVEDLKGIREIRSVFDAEVQKLEADRHQ 960
Query: 2930 LGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVVP 3109
LGTEI TGDNSWP+PVN++RL+ NAQKTFK+D RRPSDMHPMEIVEA+DKLQERLKVVP
Sbjct: 961 LGTEIAVTGDNSWPLPVNIQRLVLNAQKTFKIDFRRPSDMHPMEIVEAVDKLQERLKVVP 1020
Query: 3110 GDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAPG 3289
GDD +SMEAQKNATLFFNILLRS ASKRVLKE+ L+REAF+WV+GE+ESRFLQSLVAPG
Sbjct: 1021 GDDYLSMEAQKNATLFFNILLRSALASKRVLKEYRLSREAFEWVVGEIESRFLQSLVAPG 1080
Query: 3290 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 3469
EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK
Sbjct: 1081 EMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYLK 1140
Query: 3470 PEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEEV 3649
PEV KTKERAK VQCALEYTTLRSVTQATEVWYDPDPM T+IEED++FVKSYYEMPDEE+
Sbjct: 1141 PEVGKTKERAKTVQCALEYTTLRSVTQATEVWYDPDPMSTLIEEDVEFVKSYYEMPDEEI 1200
Query: 3650 APEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRIM 3829
P+KISPWLLRIELNREMMVDKKLSMADIAEKIN+EFDDDLTCIFNDDNAEKLILRIRIM
Sbjct: 1201 DPDKISPWLLRIELNREMMVDKKLSMADIAEKINVEFDDDLTCIFNDDNAEKLILRIRIM 1260
Query: 3830 NDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFKP 4009
NDEAPKGE LDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIK+ KV +FD++EGFK
Sbjct: 1261 NDEAPKGE-LDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKNSKVQKFDDNEGFKA 1319
Query: 4010 EVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 4189
E EWMLDTEGVNLLAVM HEDVDA+RTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG
Sbjct: 1320 ENEWMLDTEGVNLLAVMTHEDVDASRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFDG 1379
Query: 4190 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1380 SYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1413
>ref|XP_004972809.1| PREDICTED: DNA-directed RNA polymerase II subunit RPB1-like isoform
X1 [Setaria italica]
Length = 1852
Score = 2580 bits (6686), Expect = 0.0
Identities = 1264/1415 (89%), Positives = 1347/1415 (95%), Gaps = 1/1415 (0%)
Frame = +2
Query: 50 MDMRFPFSPAEVAKVRMVQFGILSPDEIRQMSVVQIEHSETTERGKPKPGGLSDTRLGTI 229
MD RFP+SPAEVAKV++VQFGILSPDEIRQMSV+QIEH+ET ERGKPKPGGLSD RLGTI
Sbjct: 1 MDARFPYSPAEVAKVQLVQFGILSPDEIRQMSVIQIEHAETMERGKPKPGGLSDPRLGTI 60
Query: 230 DRKMKCETCTANMAECPGHFGHLELAKPMFHIGFMKIVLSIMRCVCFNCSKILADEEDHK 409
DRK+KCETC A MAECPGHFGHLELAKPMFHIGF+K VLSIMRCVCFNCSKILADE+D K
Sbjct: 61 DRKIKCETCMAGMAECPGHFGHLELAKPMFHIGFIKTVLSIMRCVCFNCSKILADEDDTK 120
Query: 410 FKQSQRIKNPKHRLRKVLDACKNKTKCDGGDEIDVQDE-DLEKPVKKSRGGCGAQQPKLT 586
FKQ+ +I+NPK+RL+++ DACK+K C GGD++DVQ++ D ++PVKK RGGCGAQQP +T
Sbjct: 121 FKQALKIRNPKNRLKRIYDACKSKKVCAGGDDLDVQEQQDTDEPVKK-RGGCGAQQPNIT 179
Query: 587 IEGMKMIAEYKIQRKKTDDPEQLPEPVERKQQLTAERVLSVLKRISDEDCILLGLNPKYA 766
++GMKM+AE+K +KKTDD +QLPEPVERKQ L+AERVL+VLKRISDEDC+LLGLNPK+A
Sbjct: 180 VDGMKMVAEFKAPKKKTDDQDQLPEPVERKQILSAERVLNVLKRISDEDCLLLGLNPKFA 239
Query: 767 RPDWMILQVLXXXXXXXXXSVMMDTSARSEDDLTHQLAMIIRHNENLRKQERNGAPAHII 946
RPDWMILQVL SVMMDTS+RSEDDLTHQLAMIIRHNENLR+QERNGAPAHII
Sbjct: 240 RPDWMILQVLPIPPPPVRPSVMMDTSSRSEDDLTHQLAMIIRHNENLRRQERNGAPAHII 299
Query: 947 SEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 1126
+EFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA
Sbjct: 300 TEFAQLLQFHIATYFDNELPGQPRATQRSGRPIKSICSRLKAKEGRIRGNLMGKRVDFSA 359
Query: 1127 RTVITPDPTINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPVGKTGAKYII 1306
RTVITPDP INIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPP GKTGAKYII
Sbjct: 360 RTVITPDPNINIDELGVPWSIALNLTYPETVTPYNIERLKELVEYGPHPPPGKTGAKYII 419
Query: 1307 REDGQRLDLRYLKKSSDHHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 1486
REDGQRLDLRY+KKSSD HLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS
Sbjct: 420 REDGQRLDLRYVKKSSDQHLELGYKVERHLNDGDFVLFNRQPSLHKMSIMGHRIKIMPYS 479
Query: 1487 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 1666
TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD
Sbjct: 480 TFRLNLSVTSPYNADFDGDEMNMHVPQSFETRAEVLELMMVPKCIVSPQSNRPVMGIVQD 539
Query: 1667 TLLGCRKITKRDTFIEKDVFMNILMWWEDFDGKVPAPTILKPRPLWTGKQVFNLIIPKQI 1846
TLLGCRKITKRDT IEKDVFMN LMWW+DFDGK+PAP ILKPRP+WTGKQVFNLIIPKQI
Sbjct: 540 TLLGCRKITKRDTLIEKDVFMNTLMWWQDFDGKIPAPAILKPRPIWTGKQVFNLIIPKQI 599
Query: 1847 NLLRTSAWHSENETGFITPGDTQVRIERGELLTGTLCKKALGTSTGSLIHVIWEEVGPDA 2026
NL+R SAWHSE ETGFITPGDT VRIE+GELL+GTLCKK+LGT +GSLIHVIWEEVGPDA
Sbjct: 600 NLIRFSAWHSETETGFITPGDTMVRIEKGELLSGTLCKKSLGTGSGSLIHVIWEEVGPDA 659
Query: 2027 ARKFLGHTQWLVNYWLLQNGFSIGIGDTIADASTMEKINDTISKAKNEVKDLIRMAQEKS 2206
ARKFLGHTQWLVNYWLLQ GFSIGIGDTIADA+TMEKIN+TISKAKNEVK+LI+ AQ+K
Sbjct: 660 ARKFLGHTQWLVNYWLLQQGFSIGIGDTIADAATMEKINETISKAKNEVKELIKQAQDKH 719
Query: 2207 LEPEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 2386
LE EPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM
Sbjct: 720 LEAEPGRTMMESFENRVNQVLNKARDDAGSSAQKSLSESNNLKAMVTAGSKGSFINISQM 779
Query: 2387 TACVGQQNVEGKRIPYGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 2566
TACVGQQNVEGKRIP+GFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR
Sbjct: 780 TACVGQQNVEGKRIPFGFIDRTLPHFTKDDYGPESRGFVENSYLRGLTPQEFFFHAMGGR 839
Query: 2567 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 2746
EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ
Sbjct: 840 EGLIDTAVKTSETGYIQRRLVKAMEDIMVKYDGTVRNSLGDVIQFLYGEDGMDAVWIESQ 899
Query: 2747 KLDSLKMKKPEFDKVYRFEFDDDNWTPNYMQSDYVEDLKNIREFRHVFDAEVKKLADDRL 2926
KLDSLKMKK EFD V+R+E DD+NW PNYM ++V+DLK IREFR+VF+AEV+KL DR
Sbjct: 900 KLDSLKMKKGEFDNVFRYELDDENWRPNYMLPEHVDDLKTIREFRNVFEAEVQKLEADRF 959
Query: 2927 QLGTEITTTGDNSWPMPVNLRRLIWNAQKTFKVDPRRPSDMHPMEIVEAIDKLQERLKVV 3106
QLGTEITTTGDNSWPMPVNL+RLIWNAQKTFK+D RRPSDMHPMEIVEAIDKLQERLKVV
Sbjct: 960 QLGTEITTTGDNSWPMPVNLKRLIWNAQKTFKIDFRRPSDMHPMEIVEAIDKLQERLKVV 1019
Query: 3107 PGDDSMSMEAQKNATLFFNILLRSTFASKRVLKEHHLTREAFDWVIGEVESRFLQSLVAP 3286
PGDD+MS+EAQKNATLFFNILLRSTFASKRVLKE+ LT+EAF+WVIGE+ESRFLQSLVAP
Sbjct: 1020 PGDDAMSIEAQKNATLFFNILLRSTFASKRVLKEYRLTKEAFEWVIGEIESRFLQSLVAP 1079
Query: 3287 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 3466
GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL
Sbjct: 1080 GEMIGCVAAQSIGEPATQMTLNTFHYAGVSAKNVTLGVPRLREIINVAKKIKTPSLSVYL 1139
Query: 3467 KPEVNKTKERAKNVQCALEYTTLRSVTQATEVWYDPDPMGTIIEEDIDFVKSYYEMPDEE 3646
KPEVNK KE AKNVQCALEYTTLRSVT ATE+WYDPDP+GTIIEED++FV+SYYEMPDE+
Sbjct: 1140 KPEVNKKKELAKNVQCALEYTTLRSVTHATEIWYDPDPLGTIIEEDVEFVRSYYEMPDED 1199
Query: 3647 VAPEKISPWLLRIELNREMMVDKKLSMADIAEKINLEFDDDLTCIFNDDNAEKLILRIRI 3826
+ P+KISPWLLRIELNREMM+DKKLSMADIAEKIN EFDDDL+CIFNDDNA+KLILRIRI
Sbjct: 1200 IDPDKISPWLLRIELNREMMIDKKLSMADIAEKINREFDDDLSCIFNDDNADKLILRIRI 1259
Query: 3827 MNDEAPKGESLDESAEDDVFLKKIESNMLTEMALRGIPDINKVFIKSGKVNRFDEDEGFK 4006
ND+APKGE DESAEDDVFLKKIE NMLTEMALRGIPDINKVFIK GKVN+FD+ EGFK
Sbjct: 1260 TNDDAPKGEIQDESAEDDVFLKKIEGNMLTEMALRGIPDINKVFIKHGKVNKFDQSEGFK 1319
Query: 4007 PEVEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 4186
+ EWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD
Sbjct: 1320 ADNEWMLDTEGVNLLAVMCHEDVDATRTTSNHLIEVIEVLGIEAVRRSLLDELRVVISFD 1379
Query: 4187 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 4291
GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT
Sbjct: 1380 GSYVNYRHLAILCDTMTYRGHLMAITRHGINRNDT 1414