BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00005691
         (1135 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI26421.3| unnamed protein product [Vitis vinifera]              362   e-126
ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-lik...   362   e-126
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   353   e-124
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   352   e-123
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   358   e-122
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   352   e-122
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps...   347   e-121
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   346   e-121
ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis ...   346   e-121
ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis tha...   345   e-121
gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thali...   345   e-121
dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsi...   345   e-121
emb|CAA74896.1| sigma factorB [Arabidopsis thaliana]                  345   e-121
ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   350   e-121
gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana]             343   e-120
ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A...   341   e-120
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   350   e-120
ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-...   347   e-120
ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-...   347   e-120
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   345   e-119

>emb|CBI26421.3| unnamed protein product [Vitis vinifera]
          Length = 555

 Score =  362 bits (929), Expect(2) = e-126
 Identities = 181/212 (85%), Positives = 201/212 (94%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELLTH +VV LS KIKAGL LEDHK+RLKER+G EP+DEQ+A S+R+ R ELQ+ L+
Sbjct: 248 VSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQSKLI 307

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 308 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 367

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLPSHLHERLSLIRNAKIRLEE GITPS+DRIAECLNMS+
Sbjct: 368 VYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLNMSQ 427

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGETL 636
           KK+ NATEA+SK+FSLDREAFPS+NGLPGETL
Sbjct: 428 KKVRNATEAISKVFSLDREAFPSLNGLPGETL 459



 Score =  118 bits (295), Expect(2) = e-126
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+TTLG RE+DIIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLKNAARK ++
Sbjct: 489 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 548

Query: 857 EAMLVKH 877
           EAMLVK+
Sbjct: 549 EAMLVKY 555


>ref|XP_002264964.2| PREDICTED: RNA polymerase sigma-B factor-like isoform 2 [Vitis
           vinifera]
          Length = 497

 Score =  362 bits (929), Expect(2) = e-126
 Identities = 181/212 (85%), Positives = 201/212 (94%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELLTH +VV LS KIKAGL LEDHK+RLKER+G EP+DEQ+A S+R+ R ELQ+ L+
Sbjct: 190 VSEELLTHAQVVLLSNKIKAGLLLEDHKSRLKERIGSEPTDEQVAASLRMSRAELQSKLI 249

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 250 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 309

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLPSHLHERLSLIRNAKIRLEE GITPS+DRIAECLNMS+
Sbjct: 310 VYWWIRQGVSRALVENSRTLRLPSHLHERLSLIRNAKIRLEEKGITPSIDRIAECLNMSQ 369

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGETL 636
           KK+ NATEA+SK+FSLDREAFPS+NGLPGETL
Sbjct: 370 KKVRNATEAISKVFSLDREAFPSLNGLPGETL 401



 Score =  118 bits (295), Expect(2) = e-126
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+TTLG RE+DIIRLYYGLD ECLTWEDIS+RIGLSRERVRQVGLVALEKLKNAARK ++
Sbjct: 431 INTTLGERERDIIRLYYGLDNECLTWEDISKRIGLSRERVRQVGLVALEKLKNAARKGRM 490

Query: 857 EAMLVKH 877
           EAMLVK+
Sbjct: 491 EAMLVKY 497


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score =  353 bits (907), Expect(2) = e-124
 Identities = 177/211 (83%), Positives = 195/211 (92%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELLTH EVV LS KIK GLSL+DHK RLKERLG EPS EQLA S+RI R ELQ++LM
Sbjct: 201 VSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILM 260

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKL MSNVRLVMSIAQ+YD+MGA++ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 261 ECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLVQGGLIGLLRGIEKFDSSKGFKISTY 320

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAK+RLEE G+TPSVDRIAE LNMS+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPSVDRIAEYLNMSQ 380

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEA+ K+FSLDREAFPS+NGLPGET
Sbjct: 381 KKVRNATEAIGKVFSLDREAFPSLNGLPGET 411



 Score =  118 bits (296), Expect(2) = e-124
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I  TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+K+
Sbjct: 442 IIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501

Query: 857 EAMLVKH 877
           EAMLVKH
Sbjct: 502 EAMLVKH 508


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  352 bits (903), Expect(2) = e-123
 Identities = 175/211 (82%), Positives = 195/211 (92%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELLTH EVV LS KIK GLSL+DHK RLKERLG EPS EQLA S+RI R ELQ++LM
Sbjct: 201 VSEELLTHAEVVRLSKKIKTGLSLDDHKLRLKERLGCEPSMEQLAASLRISRPELQSILM 260

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKL MSNVRLVMSIAQ+YD+MGA++ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 261 ECSLAREKLVMSNVRLVMSIAQRYDNMGADMADLIQGGLIGLLRGIEKFDSSKGFKISTY 320

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAK+RLEE G+TP+VDRIAE LNMS+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKLRLEEKGVTPAVDRIAEYLNMSQ 380

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEA+ K+FSLDREAFPS+NGLPGET
Sbjct: 381 KKVRNATEAIGKVFSLDREAFPSLNGLPGET 411



 Score =  118 bits (296), Expect(2) = e-123
 Identities = 58/67 (86%), Positives = 64/67 (95%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I  TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+K+
Sbjct: 442 IIVTLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501

Query: 857 EAMLVKH 877
           EAMLVKH
Sbjct: 502 EAMLVKH 508


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
           gi|462415485|gb|EMJ20222.1| hypothetical protein
           PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  358 bits (918), Expect(2) = e-122
 Identities = 177/211 (83%), Positives = 199/211 (94%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE+LLTHTEVV LS KIK GLS+E+HK+RLKERLG EPSDEQLATS+RI R +LQ+ L+
Sbjct: 205 LSEDLLTHTEVVRLSKKIKVGLSVEEHKSRLKERLGCEPSDEQLATSLRISRAQLQSKLI 264

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD+MGAE+ADL+QGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 265 ECKLAREKLAMSNVRLVMSIAQRYDNMGAEMADLIQGGLIGLLRGIEKFDSSKGFKISTY 324

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAKIRLEE GITPS+DRIAE LNMSK
Sbjct: 325 VYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPSIDRIAESLNMSK 384

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEA+SK+FSLDR+AFPS+NGLPGET
Sbjct: 385 KKVRNATEAISKVFSLDRDAFPSLNGLPGET 415



 Score =  110 bits (275), Expect(2) = e-122
 Identities = 53/67 (79%), Positives = 63/67 (94%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+  LG RE++II+LYYGL+ ECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKR++
Sbjct: 446 INMMLGEREKEIIQLYYGLENECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKREM 505

Query: 857 EAMLVKH 877
           EAML+KH
Sbjct: 506 EAMLLKH 512


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
           gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
           [Theobroma cacao]
          Length = 508

 Score =  352 bits (902), Expect(2) = e-122
 Identities = 174/211 (82%), Positives = 199/211 (94%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VS+ELL+H EVV LS KIKAGLSLE+H+ RLKERLG EPSDEQLATS++I R EL++ L+
Sbjct: 201 VSDELLSHAEVVRLSKKIKAGLSLEEHRLRLKERLGCEPSDEQLATSLKISRAELRSKLI 260

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKLAMSNVRLVMSIAQ+YD+MGAE++DL+QGGLIGLLRGIEKFDS+KG+KISTY
Sbjct: 261 ECSLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLIQGGLIGLLRGIEKFDSSKGYKISTY 320

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAKIRLEE GITP++DRIAE LNMS+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPTHLHERLGLIRNAKIRLEEKGITPTIDRIAESLNMSQ 380

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 381 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 411



 Score =  115 bits (288), Expect(2) = e-122
 Identities = 57/67 (85%), Positives = 64/67 (95%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+ TLG RE++IIRLYYGLDKE LTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+K+
Sbjct: 442 ITITLGEREREIIRLYYGLDKESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKM 501

Query: 857 EAMLVKH 877
           EAMLVKH
Sbjct: 502 EAMLVKH 508


>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
           gi|482570853|gb|EOA35041.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
          Length = 521

 Score =  347 bits (891), Expect(2) = e-121
 Identities = 171/211 (81%), Positives = 198/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE++L+HTEVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 214 ISEDVLSHTEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAISLKISRAELQAWLM 273

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 274 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 333

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 334 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 393

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 394 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 424



 Score =  116 bits (290), Expect(2) = e-121
 Identities = 56/67 (83%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+ TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 455 ITATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 514

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 515 EAMILKN 521


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
           gi|557097090|gb|ESQ37598.1| hypothetical protein
           EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  346 bits (887), Expect(2) = e-121
 Identities = 172/211 (81%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 212 VSEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAISLKISRGELQAWLM 271

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD+MGAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 272 ECHLAREKLAMSNVRLVMSIAQRYDNMGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 331

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 332 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 391

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 392 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 422



 Score =  117 bits (293), Expect(2) = e-121
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 453 ISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 512

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 513 EAMILKN 519


>ref|XP_002886771.1| RNA polymerase sigma subunit 1 [Arabidopsis lyrata subsp. lyrata]
           gi|297332612|gb|EFH63030.1| RNA polymerase sigma subunit
           1 [Arabidopsis lyrata subsp. lyrata]
          Length = 503

 Score =  346 bits (887), Expect(2) = e-121
 Identities = 170/211 (80%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 196 ISEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 255

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 256 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 315

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 316 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 375

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSKIFSLDR+AFPS+NGLPGET
Sbjct: 376 KKVRNATEAVSKIFSLDRDAFPSLNGLPGET 406



 Score =  117 bits (293), Expect(2) = e-121
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 437 ISATLGEREREIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 496

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 497 EAMILKN 503


>ref|NP_176666.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
           gi|75098242|sp|O24629.1|SIGA_ARATH RecName: Full=RNA
           polymerase sigma factor sigA; Short=Sigma factor A;
           Short=Sigma-A; AltName: Full=RNA polymerase sigma factor
           sig1; Short=Atsig1; Short=Sigma factor 1; AltName:
           Full=RNA polymerase sigma factor sig2; Short=Atsig2;
           Short=Sigma factor 2; AltName: Full=RNA polymerase sigma
           factor sigB; Short=Sigma factor B; Short=Sigma-B; Flags:
           Precursor gi|5042421|gb|AAD38260.1|AC006193_16 RNA
           polymerase sigma subunit 1 [Arabidopsis thaliana]
           gi|2353171|gb|AAB69384.1| sigma factor 1 [Arabidopsis
           thaliana] gi|2443408|dbj|BAA22421.1| SigA [Arabidopsis
           thaliana] gi|2558514|emb|CAA74640.1| plastid RNA
           polymerase sigma factor [Arabidopsis thaliana]
           gi|5478439|dbj|BAA82448.1| sigma factor SigA
           [Arabidopsis thaliana] gi|17064900|gb|AAL32604.1| RNA
           polymerase sigma subunit 1 [Arabidopsis thaliana]
           gi|20259916|gb|AAM13305.1| RNA polymerase sigma subunit
           1 [Arabidopsis thaliana] gi|222423019|dbj|BAH19492.1|
           AT1G64860 [Arabidopsis thaliana]
           gi|332196177|gb|AEE34298.1| RNA polymerase sigma subunit
           1 [Arabidopsis thaliana]
          Length = 502

 Score =  345 bits (886), Expect(2) = e-121
 Identities = 169/211 (80%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 195 ISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 254

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 255 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 314

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 315 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 374

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 375 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 405



 Score =  117 bits (293), Expect(2) = e-121
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 496 EAMILKN 502


>gb|AAB81958.1| RNA polymerase sigma subunit 1 [Arabidopsis thaliana]
          Length = 502

 Score =  345 bits (886), Expect(2) = e-121
 Identities = 169/211 (80%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 195 ISEDVLSHAEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 254

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 255 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 314

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 315 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 374

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 375 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 405



 Score =  117 bits (293), Expect(2) = e-121
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 496 EAMILKN 502


>dbj|BAA22214.1| plastid RNA polymerase sigma-subunit [Arabidopsis thaliana]
          Length = 502

 Score =  345 bits (886), Expect(2) = e-121
 Identities = 169/211 (80%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 195 ISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 254

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 255 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 314

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 315 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 374

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 375 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 405



 Score =  117 bits (293), Expect(2) = e-121
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 496 EAMILKN 502


>emb|CAA74896.1| sigma factorB [Arabidopsis thaliana]
          Length = 500

 Score =  345 bits (886), Expect(2) = e-121
 Identities = 169/211 (80%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 193 ISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 252

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+YD++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 253 ECHLAREKLAMSNVRLVMSIAQRYDNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 312

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 313 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 372

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 373 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 403



 Score =  117 bits (293), Expect(2) = e-121
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 434 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 493

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 494 EAMILKN 500


>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  350 bits (897), Expect(2) = e-121
 Identities = 175/211 (82%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELL+H EVV LS  IKAGLSLEDHK+RLKERLG +PSDEQ+ATS++I R ELQ+  +
Sbjct: 201 VSEELLSHAEVVRLSRIIKAGLSLEDHKSRLKERLGCDPSDEQVATSLKISRAELQSKSI 260

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
            CSLAREKLAMSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 261 ACSLAREKLAMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFRISTY 320

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLP+HLHERL LIRNAKIRLEE G+TPS+DRIAE LN+S+
Sbjct: 321 VYWWIRQGVSRALVENSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNISQ 380

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSK+FSLDREAFPS+NGLPGET
Sbjct: 381 KKVRNATEAVSKVFSLDREAFPSLNGLPGET 411



 Score =  112 bits (281), Expect(2) = e-121
 Identities = 57/67 (85%), Positives = 62/67 (92%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+ TL  REQ+IIRLYYGLD E LTWEDIS+RIGLSRERVRQVGLVALEKLK+AARK+KL
Sbjct: 442 INLTLQEREQEIIRLYYGLDNESLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKKKL 501

Query: 857 EAMLVKH 877
           EAMLVKH
Sbjct: 502 EAMLVKH 508


>gb|AAG40388.1|AF325036_1 At1g64860 [Arabidopsis thaliana]
          Length = 502

 Score =  343 bits (881), Expect(2) = e-120
 Identities = 168/211 (79%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           +SE++L+H EVV LS KIK+GL L+DHK+RLK+RLG EPSDEQLA S++I R ELQA LM
Sbjct: 195 ISEDVLSHVEVVRLSKKIKSGLRLDDHKSRLKDRLGCEPSDEQLAVSLKISRAELQAWLM 254

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           EC LAREKLAMSNVRLVMSIAQ+Y+++GAE++DLVQGGLIGLLRGIEKFDS+KGF+ISTY
Sbjct: 255 ECHLAREKLAMSNVRLVMSIAQRYNNLGAEMSDLVQGGLIGLLRGIEKFDSSKGFRISTY 314

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAK+RL+E GITPS+DRIAE LNMS+
Sbjct: 315 VYWWIRQGVSRALVDNSRTLRLPTHLHERLGLIRNAKLRLQEKGITPSIDRIAESLNMSQ 374

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEAVSK+FSLDR+AFPS+NGLPGET
Sbjct: 375 KKVRNATEAVSKVFSLDRDAFPSLNGLPGET 405



 Score =  117 bits (293), Expect(2) = e-120
 Identities = 57/67 (85%), Positives = 65/67 (97%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS TLG RE++IIRLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKRK+
Sbjct: 436 ISATLGEREKEIIRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRKM 495

Query: 857 EAMLVKH 877
           EAM++K+
Sbjct: 496 EAMILKN 502


>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
           gi|548832002|gb|ERM94804.1| hypothetical protein
           AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score =  341 bits (875), Expect(2) = e-120
 Identities = 165/211 (78%), Positives = 198/211 (93%)
 Frame = +1

Query: 4   SEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLME 183
           ++ LL+H EVVHLS KI+AGLSLE+HK+RLKE+LG++PSDE LA+S++I R EL + L+E
Sbjct: 191 NDSLLSHAEVVHLSWKIRAGLSLEEHKSRLKEKLGFDPSDELLASSLKISRSELHSKLIE 250

Query: 184 CSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTYV 363
           CSLA+EKLAMSN+RLVMSIAQKYD+MG E+ADL+QGGLIGLLRGIEKFDS+KGFKISTYV
Sbjct: 251 CSLAKEKLAMSNIRLVMSIAQKYDNMGIEMADLIQGGLIGLLRGIEKFDSSKGFKISTYV 310

Query: 364 YWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSKK 543
           YWWIRQGVSRA++ENSRTLRLP+HLHERLSLIRNAKIRL+E G+TPS+ RIA+ LNMSKK
Sbjct: 311 YWWIRQGVSRAMVENSRTLRLPTHLHERLSLIRNAKIRLKEQGLTPSIHRIAKSLNMSKK 370

Query: 544 KITNATEAVSKIFSLDREAFPSINGLPGETL 636
           K+ NATEA++K+FSLDREAFP++NGLPGETL
Sbjct: 371 KVKNATEAMTKVFSLDREAFPTLNGLPGETL 401



 Score =  119 bits (297), Expect(2) = e-120
 Identities = 59/67 (88%), Positives = 63/67 (94%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           IS+TL  REQDIIRLYYGLDKEC TWEDISR+IGLSRERVRQVGLVALEKLKNAAR ++L
Sbjct: 431 ISSTLAEREQDIIRLYYGLDKECHTWEDISRKIGLSRERVRQVGLVALEKLKNAARNKRL 490

Query: 857 EAMLVKH 877
           EAMLVKH
Sbjct: 491 EAMLVKH 497


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
           gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
           1 family protein [Populus trichocarpa]
          Length = 509

 Score =  350 bits (897), Expect(2) = e-120
 Identities = 173/211 (81%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VS+E+L HTEVV LS  I+AGLS EDHK+RLKERLG EPSDEQ+A S+RI R +LQ+ L+
Sbjct: 202 VSDEVLPHTEVVRLSRIIRAGLSFEDHKSRLKERLGCEPSDEQIADSLRISRADLQSKLI 261

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           +CSLAREKLAMSNVRLVMSIAQKYD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 262 QCSLAREKLAMSNVRLVMSIAQKYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 321

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL++NSRTLRLP+HLHERL LIRNAKIRLEE G+TPS+DRIAE LNMS+
Sbjct: 322 VYWWIRQGVSRALVDNSRTLRLPNHLHERLGLIRNAKIRLEEKGVTPSIDRIAESLNMSQ 381

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           +K+ NATEA+SK+FSLDREAFPS+NGLPGET
Sbjct: 382 RKVRNATEAISKVFSLDREAFPSLNGLPGET 412



 Score =  110 bits (274), Expect(2) = e-120
 Identities = 54/67 (80%), Positives = 62/67 (92%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I +TL  RE++IIRLY+GLD+ECLTWEDIS+R+GLSRERVRQVGLVALEKLK+AARKR  
Sbjct: 443 IDSTLQEREKEIIRLYHGLDQECLTWEDISKRMGLSRERVRQVGLVALEKLKHAARKRNT 502

Query: 857 EAMLVKH 877
           EAMLVKH
Sbjct: 503 EAMLVKH 509


>ref|XP_004499499.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Cicer
           arietinum] gi|502126940|ref|XP_004499500.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Cicer
           arietinum]
          Length = 514

 Score =  347 bits (890), Expect(2) = e-120
 Identities = 168/211 (79%), Positives = 200/211 (94%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELL+H +VV LS KIKAGLSL++HK+RLKERLG EPSD+Q+ATS++I + EL+A ++
Sbjct: 207 VSEELLSHAQVVKLSQKIKAGLSLDEHKSRLKERLGCEPSDDQVATSLKISQAELRAKII 266

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKL MSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 267 ECSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 326

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVS+AL+ENSRTLRLP+HLHERLSLIRNA+ RLEE GITP++DRIA+CLNMS+
Sbjct: 327 VYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRNAEYRLEERGITPTIDRIAKCLNMSQ 386

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEA++K+FS+DREAFPS+NGLPG+T
Sbjct: 387 KKVRNATEAINKVFSIDREAFPSLNGLPGDT 417



 Score =  112 bits (280), Expect(2) = e-120
 Identities = 54/67 (80%), Positives = 63/67 (94%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+ TL  RE++I+RLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+ ARKR++
Sbjct: 448 INVTLVEREREIVRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHEARKREM 507

Query: 857 EAMLVKH 877
           EAML+KH
Sbjct: 508 EAMLLKH 514


>ref|XP_004499501.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X3 [Cicer
           arietinum]
          Length = 513

 Score =  347 bits (890), Expect(2) = e-120
 Identities = 168/211 (79%), Positives = 200/211 (94%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELL+H +VV LS KIKAGLSL++HK+RLKERLG EPSD+Q+ATS++I + EL+A ++
Sbjct: 206 VSEELLSHAQVVKLSQKIKAGLSLDEHKSRLKERLGCEPSDDQVATSLKISQAELRAKII 265

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKL MSNVRLVMSIAQ+YD+MGAE+ADLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 266 ECSLAREKLTMSNVRLVMSIAQRYDNMGAEMADLVQGGLIGLLRGIEKFDSSKGFKISTY 325

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVS+AL+ENSRTLRLP+HLHERLSLIRNA+ RLEE GITP++DRIA+CLNMS+
Sbjct: 326 VYWWIRQGVSKALVENSRTLRLPTHLHERLSLIRNAEYRLEERGITPTIDRIAKCLNMSQ 385

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEA++K+FS+DREAFPS+NGLPG+T
Sbjct: 386 KKVRNATEAINKVFSIDREAFPSLNGLPGDT 416



 Score =  112 bits (280), Expect(2) = e-120
 Identities = 54/67 (80%), Positives = 63/67 (94%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+ TL  RE++I+RLYYGLDKECLTWEDIS+RIGLSRERVRQVGLVALEKLK+ ARKR++
Sbjct: 447 INVTLVEREREIVRLYYGLDKECLTWEDISKRIGLSRERVRQVGLVALEKLKHEARKREM 506

Query: 857 EAMLVKH 877
           EAML+KH
Sbjct: 507 EAMLLKH 513


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  345 bits (885), Expect(2) = e-119
 Identities = 172/211 (81%), Positives = 197/211 (93%)
 Frame = +1

Query: 1   VSEELLTHTEVVHLSMKIKAGLSLEDHKTRLKERLGYEPSDEQLATSMRIPRVELQAVLM 180
           VSEELL+H EVV+LS KIK GLSLE+HK+RLKE+LG EPSD+Q+ATS++I R EL+A ++
Sbjct: 196 VSEELLSHAEVVNLSEKIKVGLSLEEHKSRLKEKLGCEPSDDQMATSLKISRTELRARMI 255

Query: 181 ECSLAREKLAMSNVRLVMSIAQKYDHMGAELADLVQGGLIGLLRGIEKFDSTKGFKISTY 360
           ECSLAREKLAMSNVRLVMSIAQKYD++GAE+ DLVQGGLIGLLRGIEKFDS+KGFKISTY
Sbjct: 256 ECSLAREKLAMSNVRLVMSIAQKYDNLGAEMGDLVQGGLIGLLRGIEKFDSSKGFKISTY 315

Query: 361 VYWWIRQGVSRALMENSRTLRLPSHLHERLSLIRNAKIRLEENGITPSVDRIAECLNMSK 540
           VYWWIRQGVSRAL+ENSRTLRLP+HLHERLSLIRNAK RLEE GITP++DRIA+ LNMS+
Sbjct: 316 VYWWIRQGVSRALVENSRTLRLPAHLHERLSLIRNAKFRLEERGITPTIDRIAKYLNMSQ 375

Query: 541 KKITNATEAVSKIFSLDREAFPSINGLPGET 633
           KK+ NATEA+SKI SLDREAFPS+NGL GET
Sbjct: 376 KKVRNATEAISKIISLDREAFPSLNGLQGET 406



 Score =  113 bits (282), Expect(2) = e-119
 Identities = 55/67 (82%), Positives = 64/67 (95%)
 Frame = +2

Query: 677 ISTTLGTREQDIIRLYYGLDKECLTWEDISRRIGLSRERVRQVGLVALEKLKNAARKRKL 856
           I+ TL  RE++IIRLYYGL+KECLTWEDIS+RIGLSRERVRQVGLVALEKLK+AARKR++
Sbjct: 437 INVTLVEREREIIRLYYGLEKECLTWEDISKRIGLSRERVRQVGLVALEKLKHAARKRQM 496

Query: 857 EAMLVKH 877
           EAML+KH
Sbjct: 497 EAMLLKH 503