BLASTX nr result

ID: Papaver25_contig00004806 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00004806
         (620 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_006387399.1| hypothetical protein POPTR_1105s00200g [Popu...    61   3e-07
ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Sol...    57   3e-06

>ref|XP_006387399.1| hypothetical protein POPTR_1105s00200g [Populus trichocarpa]
           gi|550306920|gb|ERP46313.1| hypothetical protein
           POPTR_1105s00200g [Populus trichocarpa]
          Length = 419

 Score = 60.8 bits (146), Expect = 3e-07
 Identities = 53/171 (30%), Positives = 84/171 (49%), Gaps = 16/171 (9%)
 Frame = +2

Query: 74  YANGALHWI-----DYLR-GMILVFDLSEEKFRQNLSLPPLPQDYISDGYDYT---LGEL 226
           + NG+ HWI     DY R  +I  F+   E+FR  L LP  P D++  GY Y    LG L
Sbjct: 225 FVNGSFHWIIDINDDYDRTNIIYYFNFESEQFRTFL-LPVPPIDHVY-GYCYQYADLGVL 282

Query: 227 GGVLYCAI--YLPGGTCSDIWLLKEKNDNLDMKE--QVEHEPYCWR-KEFSLPGMEPLAF 391
           G  LYC+   YLP   C ++W++K+        E   +EH    W  ++F +     + F
Sbjct: 283 GDSLYCSYFSYLPCDDCINLWVMKDYGVEDSWAEILVIEHRMPFWEPRDFKV-----IKF 337

Query: 392 TKSGAVLCLDDTSLGVFDATDSTSKKL--LELISYKHIFAHKNTLVSLKQL 538
            ++  +L L D  L  +DA     +++   E+IS+ +  +H  T  S+K +
Sbjct: 338 FENRNILFLVDYYLWFYDAERKCYERVEDAEVISFLYAISHTPTFASIKDI 388


>ref|XP_004239427.1| PREDICTED: F-box protein At3g07870-like [Solanum lycopersicum]
          Length = 327

 Score = 57.4 bits (137), Expect = 3e-06
 Identities = 52/188 (27%), Positives = 80/188 (42%), Gaps = 12/188 (6%)
 Frame = +2

Query: 2   GSGEGWRYAGKLEFMFPSCVKPG-VYANGALHWIDYLRG-MILVFDLSEEKFRQNLSLPP 175
           G GE WR  GK+    P+C K G V  NGALHW+D  +  +I  FD+  EK +      P
Sbjct: 139 GIGEKWRNVGKIPC--PACYKFGKVNINGALHWMDSEKNDIIYSFDIETEKIKS----LP 192

Query: 176 LPQDYISDGYDYTLGELGGVLYCAIYLPGGTCSDIWLLKEKNDNLDMKEQVEHEPYCWRK 355
            P   ++  ++  L ELG  L    Y    T  DIW +KE   +             W K
Sbjct: 193 APLGLVNPPWNLKLVELGNYLCLTDYY--NTNIDIWRMKEYGIS-----------ESWTK 239

Query: 356 EF----SLP------GMEPLAFTKSGAVLCLDDTSLGVFDATDSTSKKLLELISYKHIFA 505
           +     S+P        EP+   K G +L    T L ++D          ++ S++ ++ 
Sbjct: 240 DIILVDSIPRSMVHFNFEPILMWKDGEILIQSGTKLALYDP---------KMKSFRLVYF 290

Query: 506 HKNTLVSL 529
           H   + ++
Sbjct: 291 HSEVITAV 298


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