BLASTX nr result
ID: Papaver25_contig00003608
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00003608
(1687 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [A... 45 1e-07
emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera] 42 1e-06
ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chlor... 42 1e-06
ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chlor... 42 2e-06
ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chlor... 44 2e-06
ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chl... 40 3e-06
gb|EMS58535.1| RNA pseudourine synthase 2, chloroplastic [Tritic... 40 5e-06
gb|EMT10334.1| RNA pseudourine synthase 2, chloroplastic [Aegilo... 40 6e-06
ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [S... 40 9e-06
>ref|XP_006828851.1| hypothetical protein AMTR_s00001p00157430 [Amborella trichopoda]
gi|548833830|gb|ERM96267.1| hypothetical protein
AMTR_s00001p00157430 [Amborella trichopoda]
Length = 452
Score = 45.4 bits (106), Expect(2) = 1e-07
Identities = 20/35 (57%), Positives = 25/35 (71%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALSRLR +TPS+ H L +LV QRPC H ++LG
Sbjct: 367 ALSRLRPRTPSHYHGPLSQLVSNLQRPCLHAFSLG 401
Score = 39.3 bits (90), Expect(2) = 1e-07
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IR HAK++G PLLGDEVY GTK
Sbjct: 343 IRVHAKYIGNPLLGDEVYGGTK 364
>emb|CAN66750.1| hypothetical protein VITISV_034413 [Vitis vinifera]
Length = 611
Score = 42.0 bits (97), Expect(2) = 1e-06
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAK+LG PLLGDEVY GTK
Sbjct: 481 IRAHAKYLGIPLLGDEVYGGTK 502
Score = 39.3 bits (90), Expect(2) = 1e-06
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS LR + PS+ H L +LV + RPC H ALG
Sbjct: 505 ALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALG 539
>ref|XP_003634352.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Vitis
vinifera] gi|302141717|emb|CBI18920.3| unnamed protein
product [Vitis vinifera]
Length = 433
Score = 42.0 bits (97), Expect(2) = 1e-06
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAK+LG PLLGDEVY GTK
Sbjct: 335 IRAHAKYLGIPLLGDEVYGGTK 356
Score = 39.3 bits (90), Expect(2) = 1e-06
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS LR + PS+ H L +LV + RPC H ALG
Sbjct: 359 ALSLLRPRIPSSHHGQLAQLVSRLDRPCLHAVALG 393
>ref|XP_003563280.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like
[Brachypodium distachyon]
Length = 439
Score = 42.0 bits (97), Expect(2) = 2e-06
Identities = 18/22 (81%), Positives = 20/22 (90%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAK+LGYPLLGDE Y G+K
Sbjct: 335 IRAHAKYLGYPLLGDETYGGSK 356
Score = 38.5 bits (88), Expect(2) = 2e-06
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS LR +TPS H L L+ K RPC H LG
Sbjct: 359 ALSLLRPRTPSRYHGDLSNLISKIDRPCLHAALLG 393
>ref|XP_004238386.1| PREDICTED: RNA pseudourine synthase 2, chloroplastic-like [Solanum
lycopersicum]
Length = 436
Score = 43.5 bits (101), Expect(2) = 2e-06
Identities = 19/22 (86%), Positives = 20/22 (90%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAKHLG PL+GDEVY GTK
Sbjct: 337 IRAHAKHLGIPLMGDEVYGGTK 358
Score = 36.6 bits (83), Expect(2) = 2e-06
Identities = 17/35 (48%), Positives = 20/35 (57%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS L+ KTP H L +LV + RPC H LG
Sbjct: 361 ALSLLQPKTPPMFHGELSQLVSQIDRPCLHALTLG 395
>ref|XP_004966473.1| PREDICTED: RNA pseudouridine synthase 2, chloroplastic-like
[Setaria italica]
Length = 437
Score = 40.4 bits (93), Expect(2) = 3e-06
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAK+LG PLLGDE Y GTK
Sbjct: 336 IRAHAKYLGIPLLGDETYGGTK 357
Score = 39.3 bits (90), Expect(2) = 3e-06
Identities = 18/35 (51%), Positives = 22/35 (62%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS LR +TPS H+ L +L+ K RPC H LG
Sbjct: 360 ALSLLRPRTPSKYHSGLSDLISKVDRPCLHAALLG 394
>gb|EMS58535.1| RNA pseudourine synthase 2, chloroplastic [Triticum urartu]
Length = 485
Score = 40.0 bits (92), Expect(2) = 5e-06
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAK+LG PLLGDE Y GTK
Sbjct: 297 IRAHAKYLGNPLLGDETYGGTK 318
Score = 38.9 bits (89), Expect(2) = 5e-06
Identities = 19/35 (54%), Positives = 20/35 (57%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS LR +TPS H L LV K RPC H LG
Sbjct: 321 ALSLLRPRTPSKYHGDLTNLVSKIDRPCLHAALLG 355
>gb|EMT10334.1| RNA pseudourine synthase 2, chloroplastic [Aegilops tauschii]
Length = 220
Score = 40.4 bits (93), Expect(2) = 6e-06
Identities = 18/22 (81%), Positives = 19/22 (86%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAK+LG PLLGDE Y GTK
Sbjct: 162 IRAHAKYLGNPLLGDETYEGTK 183
Score = 38.5 bits (88), Expect(2) = 6e-06
Identities = 18/35 (51%), Positives = 20/35 (57%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS LR +TPS H L L+ K RPC H LG
Sbjct: 186 ALSLLRPRTPSKYHGDLSNLISKIDRPCLHAALLG 220
>ref|XP_002439034.1| hypothetical protein SORBIDRAFT_10g030300 [Sorghum bicolor]
gi|241917257|gb|EER90401.1| hypothetical protein
SORBIDRAFT_10g030300 [Sorghum bicolor]
Length = 441
Score = 39.7 bits (91), Expect(2) = 9e-06
Identities = 17/22 (77%), Positives = 19/22 (86%)
Frame = +2
Query: 875 IRAHAKHLGYPLLGDEVYVGTK 940
IRAHAK++G PLLGDE Y GTK
Sbjct: 341 IRAHAKYIGIPLLGDETYGGTK 362
Score = 38.5 bits (88), Expect(2) = 9e-06
Identities = 18/35 (51%), Positives = 21/35 (60%)
Frame = +1
Query: 946 ALSRLRHKTPSNMHNYLPELVDKFQRPCQHVYALG 1050
ALS LR +TPS H+ L L+ K RPC H LG
Sbjct: 365 ALSLLRPRTPSKYHSDLSNLISKVDRPCLHAALLG 399