BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00001216
         (572 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   160   2e-37
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   148   9e-34
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   145   6e-33
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   143   4e-32
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   143   4e-32
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   141   1e-31
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   141   1e-31
ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A...   130   2e-28
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   130   2e-28
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...   127   3e-27
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   126   5e-27
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   125   8e-27
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   125   8e-27
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   125   1e-26
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      124   1e-26
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   121   1e-25
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps...   121   1e-25
ref|XP_006302141.1| hypothetical protein CARUB_v10020145mg [Caps...   121   1e-25
ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phas...   116   4e-24
ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-...   114   1e-23

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  160 bits (405), Expect = 2e-37
 Identities = 104/197 (52%), Positives = 131/197 (66%), Gaps = 7/197 (3%)
 Frame = +2

Query: 2   SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 169
           S+FYYSD+TEKL   +EHG T Y Q+ S KT LI AKK+S+ +GP+FPS N++TQSI AL
Sbjct: 18  STFYYSDLTEKLSSANEHGLTHY-QITSTKT-LIVAKKSSN-YGPSFPSSNRNTQSIKAL 74

Query: 170 TEHLESSFVPSTT-DEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERK 346
            EH++++  PST   +F    D                 A+LLLQKSMLEKQWNLSFER 
Sbjct: 75  KEHVDTASAPSTAATQFKTFNDMEEESSDLDYSVE----ALLLLQKSMLEKQWNLSFERT 130

Query: 347 RTVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQ 520
            +   P  +S K I V  SG+SARQRRI+ R KN   +   ++    KQ+ S VSPELLQ
Sbjct: 131 DSSDSPSRKSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQLKSAVSPELLQ 190

Query: 521 NKLQGYVKGVVSEELLT 571
           N+L+GYVKGVVSEELL+
Sbjct: 191 NRLKGYVKGVVSEELLS 207


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  148 bits (374), Expect = 9e-34
 Identities = 95/196 (48%), Positives = 130/196 (66%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2   SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 169
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            EH++++F  ++T E W  P                  A+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 350 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 523
               P ++++K + V  SG+SARQRR++++ K    N  VL++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVLQQNGSKQLRSMISPELIQN 191

Query: 524 KLQGYVKGVVSEELLT 571
            L+GYVKGVVSEELLT
Sbjct: 192 HLKGYVKGVVSEELLT 207


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score =  145 bits (367), Expect = 6e-33
 Identities = 94/196 (47%), Positives = 129/196 (65%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2   SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 169
           SSFYYSDI+EK   +++ GS    QV S K N++ AKK+S+ + P+FPS N+ TQ I AL
Sbjct: 19  SSFYYSDISEKFSYINDLGSAN-SQVGSTK-NVVAAKKSSN-YNPSFPSSNRQTQPIKAL 75

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            EH++++F  ++T E W  P                  A+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTNF--ASTAEPWAEPP--NSIEEESSELDYSVEALLLLQKSMLEKQWNLSFERTV 131

Query: 350 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR--KKQIGSIVSPELLQN 523
               P ++++K + V  SG+SARQRR++++ K    N  V ++   KQ+ S++SPEL+QN
Sbjct: 132 LTDSPSKKTHKKVPVTCSGVSARQRRLNSKKKILSQNKSVPQQNGSKQLRSMISPELIQN 191

Query: 524 KLQGYVKGVVSEELLT 571
            L+GYVKGVVSEELLT
Sbjct: 192 HLKGYVKGVVSEELLT 207


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
           gi|550316904|gb|ERP49007.1| hypothetical protein
           POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  143 bits (360), Expect = 4e-32
 Identities = 90/195 (46%), Positives = 128/195 (65%), Gaps = 6/195 (3%)
 Frame = +2

Query: 2   SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 169
           SSFYYSD+TEKL   ++HG T Y+  A+ K N+I AKK+S+ +GP+FPS N+++ SI AL
Sbjct: 19  SSFYYSDLTEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKAL 75

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            EH++++   S    ++ + D                 A+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTN 132

Query: 350 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQN 523
           +     +++NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN
Sbjct: 133 SSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQN 192

Query: 524 KLQGYVKGVVSEELL 568
           +L+GYVKGVVS+E+L
Sbjct: 193 RLKGYVKGVVSDEVL 207


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
           gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
           1 family protein [Populus trichocarpa]
          Length = 509

 Score =  143 bits (360), Expect = 4e-32
 Identities = 90/195 (46%), Positives = 128/195 (65%), Gaps = 6/195 (3%)
 Frame = +2

Query: 2   SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 169
           SSFYYSD+TEKL   ++HG T Y+  A+ K N+I AKK+S+ +GP+FPS N+++ SI AL
Sbjct: 19  SSFYYSDLTEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKAL 75

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            EH++++   S    ++ + D                 A+LLLQKSMLEKQWNLSFER  
Sbjct: 76  KEHVDTASASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTN 132

Query: 350 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQN 523
           +     +++NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN
Sbjct: 133 SSDSTSKKNNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQN 192

Query: 524 KLQGYVKGVVSEELL 568
           +L+GYVKGVVS+E+L
Sbjct: 193 RLKGYVKGVVSDEVL 207


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
           gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
           [Theobroma cacao]
          Length = 450

 Score =  141 bits (356), Expect = 1e-31
 Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
 Frame = +2

Query: 2   SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 172
           SSF YSDI EKL   +++GS+ +HQ +S K+ LI AKK+S+       SN+  QSI AL 
Sbjct: 19  SSFSYSDIIEKLSYANDYGSS-HHQTSSTKS-LIVAKKSSNCSQSLPSSNRRAQSIKALK 76

Query: 173 EHLESSFVPSTTDE-FWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
           EH++S+ + ST +  F GS D                 A+LLLQKSMLEKQW LSFER  
Sbjct: 77  EHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTV 132

Query: 350 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLR-RKKQIGSIVSPELLQNK 526
               P  + +K I V  SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++
Sbjct: 133 FTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSR 192

Query: 527 LQGYVKGVVSEELLT 571
           L+GYVKGVVS+ELL+
Sbjct: 193 LKGYVKGVVSDELLS 207


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
           gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
           [Theobroma cacao]
          Length = 508

 Score =  141 bits (356), Expect = 1e-31
 Identities = 92/195 (47%), Positives = 125/195 (64%), Gaps = 5/195 (2%)
 Frame = +2

Query: 2   SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 172
           SSF YSDI EKL   +++GS+ +HQ +S K+ LI AKK+S+       SN+  QSI AL 
Sbjct: 19  SSFSYSDIIEKLSYANDYGSS-HHQTSSTKS-LIVAKKSSNCSQSLPSSNRRAQSIKALK 76

Query: 173 EHLESSFVPSTTDE-FWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
           EH++S+ + ST +  F GS D                 A+LLLQKSMLEKQW LSFER  
Sbjct: 77  EHVDSASIVSTAEPLFQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTV 132

Query: 350 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLR-RKKQIGSIVSPELLQNK 526
               P  + +K I V  SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++
Sbjct: 133 FTESPSRKIHKKIPVTCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSR 192

Query: 527 LQGYVKGVVSEELLT 571
           L+GYVKGVVS+ELL+
Sbjct: 193 LKGYVKGVVSDELLS 207


>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
           gi|548832002|gb|ERM94804.1| hypothetical protein
           AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score =  130 bits (327), Expect = 2e-28
 Identities = 85/193 (44%), Positives = 114/193 (59%), Gaps = 3/193 (1%)
 Frame = +2

Query: 2   SSFYYSDITE--KLHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALTE 175
           SSF  SDI     +++ G+TQ+  V+    + I +KK S  FGPN PSN+ TQ INA+ E
Sbjct: 18  SSFLASDIERVIPIYDFGATQFPAVSH--KSFIVSKK-SPGFGPNSPSNRQTQYINAIKE 74

Query: 176 HLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKRTV 355
           H+ +    S++     +PDF                A++LLQKSMLEKQWNLSF++  T 
Sbjct: 75  HVNAPSSSSSSSTTEANPDFESSLE-----------ALILLQKSMLEKQWNLSFDQAGTS 123

Query: 356 VVPGEESNKNIEVARSGISARQRRISTRNK-NHVSNLIVLRRKKQIGSIVSPELLQNKLQ 532
               EES K + V  SG SARQRR S R   N  +  +++RRKKQ   IVSPELLQ   +
Sbjct: 124 TDLCEESCKKLGVISSGASARQRRNSLRRPLNQRAGTVLVRRKKQATPIVSPELLQGHFR 183

Query: 533 GYVKGVVSEELLT 571
           GYVKG+ ++ LL+
Sbjct: 184 GYVKGISNDSLLS 196


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
           gi|462415485|gb|EMJ20222.1| hypothetical protein
           PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  130 bits (327), Expect = 2e-28
 Identities = 87/197 (44%), Positives = 114/197 (57%), Gaps = 7/197 (3%)
 Frame = +2

Query: 2   SSFYYSDITEKLHE----HGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINAL 169
           SSFYYSDITEKL      HG    H   S   N++ A+K S+       SN+  QSI AL
Sbjct: 19  SSFYYSDITEKLFHLNDHHGFLHCH--FSSTKNVVTARKPSNCSSRFPSSNRPQQSIRAL 76

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            EH++++  PS+  + W                     A+LLLQKSMLEKQWNLSFE+K 
Sbjct: 77  KEHVQTASAPSSATQQWFQE--LNDLEEESSDLEYSVEALLLLQKSMLEKQWNLSFEKKV 134

Query: 350 TVVVPGEESNKNIEVARSGISARQRRI-STRNKNHVSNLIVLR--RKKQIGSIVSPELLQ 520
                 + ++K I V  SG+SARQRR+ ST+ K    +  V+     K + +IVSPELLQ
Sbjct: 135 LRDSTSKTTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPSTNKPLRAIVSPELLQ 194

Query: 521 NKLQGYVKGVVSEELLT 571
           N ++GYVKGV+SE+LLT
Sbjct: 195 NHVKGYVKGVLSEDLLT 211


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Glycine max] gi|571478813|ref|XP_006587676.1|
           PREDICTED: RNA polymerase sigma factor sigA-like isoform
           X2 [Glycine max]
          Length = 503

 Score =  127 bits (318), Expect = 3e-27
 Identities = 87/199 (43%), Positives = 118/199 (59%), Gaps = 9/199 (4%)
 Frame = +2

Query: 2   SSFYYSDITEKLH---EHGSTQYHQVASGKTNLIFAKKTSDSFGPNFP-SNQHTQSINAL 169
           SS++YSD+ EKL    + GST Y  V    T  + A K S ++ P FP SNQ  QSI AL
Sbjct: 18  SSYHYSDVIEKLSYGSDFGSTHYQIVP---TKSLIAAKKSSNYTPTFPASNQQNQSIKAL 74

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            EH++ +  P+  D ++ S +                 A+LLLQKSMLEKQWNLSFER+ 
Sbjct: 75  KEHVDDA--PTIADSWFQSCN-SNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFERE- 130

Query: 350 TVVVPGEESNKN-----IEVARSGISARQRRISTRNKNHVSNLIVLRRKKQIGSIVSPEL 514
              V  E S+K      + V  SG+SARQRR++T+ K  +     ++ K +I    SPEL
Sbjct: 131 ---VLTEHSSKGKKCKKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKI----SPEL 183

Query: 515 LQNKLQGYVKGVVSEELLT 571
           LQ++L+GYVKG+VSEELL+
Sbjct: 184 LQHRLKGYVKGIVSEELLS 202


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  126 bits (316), Expect = 5e-27
 Identities = 90/199 (45%), Positives = 122/199 (61%), Gaps = 9/199 (4%)
 Frame = +2

Query: 2   SSFYYSDITEKLH---EHGSTQYHQVASGKTNLIFAKKTSDSFGPNFP-SNQHTQSINAL 169
           SS++YSDI EKL    + GST Y  V +   +LI AKK+S+ + P FP SNQ  QSI AL
Sbjct: 18  SSYHYSDIIEKLSYGSDFGSTHYQIVPT--KSLIVAKKSSN-YTPTFPASNQQNQSIKAL 74

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            EH++ +  P+  D ++ S +                 A+LLLQKSMLEKQWNLSFER+ 
Sbjct: 75  KEHVDDA--PTIADPWFQSYN-SNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFERE- 130

Query: 350 TVVVPGEESNKN-----IEVARSGISARQRRISTRNKNHVSNLIVLRRKKQIGSIVSPEL 514
              V  E S+K      + V  SG+SARQRR++T+ K  +     ++ K +I    SPEL
Sbjct: 131 ---VLTENSSKGKKCRKVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKI----SPEL 183

Query: 515 LQNKLQGYVKGVVSEELLT 571
           LQ++L+GYVKG+VSEELL+
Sbjct: 184 LQHRLKGYVKGLVSEELLS 202


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
           gi|557097090|gb|ESQ37598.1| hypothetical protein
           EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  125 bits (314), Expect = 8e-27
 Identities = 88/205 (42%), Positives = 129/205 (62%), Gaps = 15/205 (7%)
 Frame = +2

Query: 2   SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKT---SDSFGPNFPSN-QHTQSI 160
           SSFYYSD+TEK   +++H S+QYH +AS ++  I AKKT   S ++ P+ PS+ +HTQS 
Sbjct: 19  SSFYYSDVTEKFLSVNDHCSSQYH-IASTRSG-ITAKKTPSSSSNYSPSLPSSSRHTQSA 76

Query: 161 NALTEHLESSFVPSTTDEFWGSP--DFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLS 334
            AL E ++   V +++ + W  P  D                 A+LLLQKSMLEKQWNLS
Sbjct: 77  KALKETVD---VVASSVQPWLPPGSDKEMEGESYEDDLGHSVEALLLLQKSMLEKQWNLS 133

Query: 335 FERKRTVVVPGEE--SNKNIEVARSGISARQRRISTRNKNHVSNLIVLRR---KKQIGSI 499
           FE+  T   P ++  + K   V  SGISARQRRI  + K ++S++ V+      KQ+ S+
Sbjct: 134 FEKAATSESPSKKRMTRKKNPVTCSGISARQRRIGAKKKTNMSHVKVVSEVSSGKQVKSV 193

Query: 500 VSPELLQ-NKLQGYVKGVVSEELLT 571
           ++ EL Q N+++GYV+GVVSE++L+
Sbjct: 194 INSELFQNNRVKGYVRGVVSEDVLS 218


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 509

 Score =  125 bits (314), Expect = 8e-27
 Identities = 83/195 (42%), Positives = 116/195 (59%), Gaps = 5/195 (2%)
 Frame = +2

Query: 2   SSFYYSDITEKLH---EHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 172
           SSFYYSD+ EKL    +H S   HQV + K N+I AKK+SD + P+  S++  QS+ AL 
Sbjct: 19  SSFYYSDLNEKLSCSSDH-SLPCHQVPTVK-NVISAKKSSD-YSPSCVSSRKLQSVKALK 75

Query: 173 EHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKRT 352
           EH++ +  PS    ++    F                 +LLLQKSMLEKQWNLS E   T
Sbjct: 76  EHVDIASDPSDVQSWFER--FEQLQNESDDEEDDSVEVLLLLQKSMLEKQWNLSAEETLT 133

Query: 353 VVVPGEESNKNIEVARSGISARQRRISTRNK--NHVSNLIVLRRKKQIGSIVSPELLQNK 526
                +++ K + +A SG SAR+RR+ +R +     S+   +   K + SI+ P+LLQN+
Sbjct: 134 ASTQRKKNCKKMHIACSGTSARRRRMDSRQRVLAQKSSATPISATKPLRSILGPDLLQNR 193

Query: 527 LQGYVKGVVSEELLT 571
           L+GYVKG+VSEELLT
Sbjct: 194 LKGYVKGIVSEELLT 208


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
           gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  125 bits (313), Expect = 1e-26
 Identities = 79/194 (40%), Positives = 114/194 (58%), Gaps = 4/194 (2%)
 Frame = +2

Query: 2   SSFYYSDITEKLHEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQS-INALTE 175
           SS YYSD TEK+      +  Q     +  +   K+S +F P +PS N+H+Q  I A+ E
Sbjct: 19  SSSYYSDFTEKILYANDYRLGQTQVSSSKSVVIAKSSANFSPRYPSSNRHSQQCIKAVKE 78

Query: 176 HLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKRTV 355
           H+E+   P    E W +                   A+LLLQKSMLEKQW+LSFE+  + 
Sbjct: 79  HVETPSSPIA--EPWHNTT---SWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVST 133

Query: 356 VVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRK--KQIGSIVSPELLQNKL 529
             P E++ K + V  SG+SARQRR+S++ K    ++ + + K  KQ+   +SPELLQN+L
Sbjct: 134 DTPKEKTLKKVPVTCSGVSARQRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRL 193

Query: 530 QGYVKGVVSEELLT 571
           +GYVKG++SEELL+
Sbjct: 194 KGYVKGLLSEELLS 207


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  124 bits (312), Expect = 1e-26
 Identities = 83/195 (42%), Positives = 115/195 (58%), Gaps = 5/195 (2%)
 Frame = +2

Query: 2   SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSNQHTQSINALT 172
           SSFYYSD+ EKL    +H S   H V S K N+I AKK+SD + P+  S++ +QS  +L 
Sbjct: 19  SSFYYSDLNEKLTCTSDH-SLPCHHVPSIK-NVITAKKSSD-YSPSCVSSRKSQSAKSLK 75

Query: 173 EHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKRT 352
           EH++ +  PS    ++   +                  +LLLQKSMLEKQWNLS E+  T
Sbjct: 76  EHVDITADPSDVPSWF---EMYEQLQNESDDEDESVEVLLLLQKSMLEKQWNLSLEQTLT 132

Query: 353 VVVPGEESNKNIEVARSGISARQRRISTRNK--NHVSNLIVLRRKKQIGSIVSPELLQNK 526
                E+ +K + +  SG SAR+RR+ +R +  +  S+       K + SI+ PELLQN+
Sbjct: 133 ASPQHEKKSKKMHITCSGTSARRRRMDSRQRVLDRHSSATPTSAAKPLRSIIGPELLQNR 192

Query: 527 LQGYVKGVVSEELLT 571
           L+GYVKGVVSEELLT
Sbjct: 193 LKGYVKGVVSEELLT 207


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
           gi|550325184|gb|EEE95160.2| hypothetical protein
           POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  121 bits (304), Expect = 1e-25
 Identities = 81/193 (41%), Positives = 120/193 (62%), Gaps = 4/193 (2%)
 Frame = +2

Query: 2   SSFYYSDITEKL---HEHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPSN-QHTQSINAL 169
           SSFY+SD+TEKL   ++HG   Y Q+ + K+ +I AKK+S  +GP+FPS+ ++  S  AL
Sbjct: 19  SSFYFSDLTEKLSNVNDHGVAHY-QITTTKS-VIVAKKSS-KYGPSFPSSYRNPHSNKAL 75

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            E ++++   ST   ++ + D                 A++LLQKSMLEKQWNLSFE   
Sbjct: 76  KELIDTASASSTVATWFKTLD---DFEEESSVLDYSVEALILLQKSMLEKQWNLSFESIN 132

Query: 350 TVVVPGEESNKNIEVARSGISARQRRISTRNKNHVSNLIVLRRKKQIGSIVSPELLQNKL 529
           +     ++SNK I V  SG+SARQRR++ + KN        + + +  S +SP+LL N+L
Sbjct: 133 SSDSKIKKSNKKIPVTCSGVSARQRRLNNKRKN--------QNQSKFMSDISPDLLLNRL 184

Query: 530 QGYVKGVVSEELL 568
           +GYVKGVVS+E+L
Sbjct: 185 KGYVKGVVSDEVL 197


>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
           gi|482570853|gb|EOA35041.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
          Length = 521

 Score =  121 bits (303), Expect = 1e-25
 Identities = 85/209 (40%), Positives = 128/209 (61%), Gaps = 19/209 (9%)
 Frame = +2

Query: 2   SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDS-FGPNFPS-NQHTQSINA 166
           SSFY+SD+TEK   +++H S+QYH +AS K+ +   K +S S + P+FPS N+HTQS  A
Sbjct: 18  SSFYHSDVTEKFLSVNDHCSSQYH-IASTKSGITAKKASSSSNYSPSFPSSNRHTQSAKA 76

Query: 167 LTEHL------ESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWN 328
           +TE +      E  +VP+ TD+     +F                A+LLLQKSMLEK WN
Sbjct: 77  VTESVDVVASTEQPWVPNVTDK-----EFEEGGYDDDVLIGHSVEALLLLQKSMLEKSWN 131

Query: 329 LSFERKRTVVVPGEESNKNIEV---ARSGISARQRRISTRNKNHVSN---LIVLRRKKQI 490
           LSFE+  +    G+ + +  +V     SGISARQRRI  + K ++++   +  +   KQ+
Sbjct: 132 LSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRIGAKKKTNMTSAKAVSDVSSGKQV 191

Query: 491 GSIVSPELLQ-NKLQ-GYVKGVVSEELLT 571
            S++S EL Q N+++ GYVKGV+SE++L+
Sbjct: 192 RSVMSSELFQHNRVRGGYVKGVISEDVLS 220


>ref|XP_006302141.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
           gi|565489005|ref|XP_006302142.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
           gi|482570851|gb|EOA35039.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
           gi|482570852|gb|EOA35040.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
          Length = 464

 Score =  121 bits (303), Expect = 1e-25
 Identities = 85/209 (40%), Positives = 128/209 (61%), Gaps = 19/209 (9%)
 Frame = +2

Query: 2   SSFYYSDITEK---LHEHGSTQYHQVASGKTNLIFAKKTSDS-FGPNFPS-NQHTQSINA 166
           SSFY+SD+TEK   +++H S+QYH +AS K+ +   K +S S + P+FPS N+HTQS  A
Sbjct: 19  SSFYHSDVTEKFLSVNDHCSSQYH-IASTKSGITAKKASSSSNYSPSFPSSNRHTQSAKA 77

Query: 167 LTEHL------ESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWN 328
           +TE +      E  +VP+ TD+     +F                A+LLLQKSMLEK WN
Sbjct: 78  VTESVDVVASTEQPWVPNVTDK-----EFEEGGYDDDVLIGHSVEALLLLQKSMLEKSWN 132

Query: 329 LSFERKRTVVVPGEESNKNIEV---ARSGISARQRRISTRNKNHVSN---LIVLRRKKQI 490
           LSFE+  +    G+ + +  +V     SGISARQRRI  + K ++++   +  +   KQ+
Sbjct: 133 LSFEKAASSESSGKRTIRKKKVPVITCSGISARQRRIGAKKKTNMTSAKAVSDVSSGKQV 192

Query: 491 GSIVSPELLQ-NKLQ-GYVKGVVSEELLT 571
            S++S EL Q N+++ GYVKGV+SE++L+
Sbjct: 193 RSVMSSELFQHNRVRGGYVKGVISEDVLS 221


>ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
           gi|561004471|gb|ESW03465.1| hypothetical protein
           PHAVU_011G016400g [Phaseolus vulgaris]
          Length = 504

 Score =  116 bits (291), Expect = 4e-24
 Identities = 85/196 (43%), Positives = 115/196 (58%), Gaps = 6/196 (3%)
 Frame = +2

Query: 2   SSFYYSDITEKLH---EHGSTQYHQVASGKTNLIFAKKTSDSFGPNFPS-NQHTQSINAL 169
           SS++YSDI EKL    + GST Y Q+ S K+ +I AKK+S+ + P FP+ N+  QSI  L
Sbjct: 18  SSYHYSDIIEKLSYGSDFGSTHY-QIVSTKS-VIVAKKSSN-YTPTFPAPNRQNQSIKVL 74

Query: 170 TEHLESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKR 349
            E ++ +   +T  + W                     A+LLLQKSMLEKQW+LSFE + 
Sbjct: 75  KEIVDDA---ATVADAWFQSLSSNDLEVESSEMGYSVEALLLLQKSMLEKQWSLSFEGEG 131

Query: 350 TVVVPGEESN--KNIEVARSGISARQRRISTRNKNHVSNLIVLRRKKQIGSIVSPELLQN 523
                 +E N  K   V  SG+SARQRR++ + K  V     ++ K +I    SPELLQN
Sbjct: 132 VTEHSSKEKNCRKVAAVTCSGVSARQRRMNAKRKTAVKTGGAVQLKSKI----SPELLQN 187

Query: 524 KLQGYVKGVVSEELLT 571
           +L+GYVKGVVSEELL+
Sbjct: 188 RLKGYVKGVVSEELLS 203


>ref|XP_006347341.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Solanum tuberosum] gi|565361192|ref|XP_006347342.1|
           PREDICTED: RNA polymerase sigma factor sigA-like isoform
           X2 [Solanum tuberosum]
          Length = 505

 Score =  114 bits (286), Expect = 1e-23
 Identities = 75/194 (38%), Positives = 110/194 (56%), Gaps = 4/194 (2%)
 Frame = +2

Query: 2   SSFYYSDITEKLHEHGSTQYHQVASGKT-NLIFAKKTSDSFGPNFPSNQHTQSINALTEH 178
           SSFYYSD+TEKL   G    H +    T N+I AKK+S+ +   + SN+  QS+ A+ EH
Sbjct: 18  SSFYYSDLTEKLACSGD---HALICNPTWNVINAKKSSN-YSTGYVSNRKKQSVKAVKEH 73

Query: 179 LESSFVPSTTDEFWGSPDFXXXXXXXXXXXXXXXXAILLLQKSMLEKQWNLSFERKRTVV 358
           +    + S   +     +                  +LLLQKSMLEKQWNLS E+     
Sbjct: 74  VN---IASNHSDVEPMVEMFKKLQNESFSEEDSVEVLLLLQKSMLEKQWNLSAEKTLAAF 130

Query: 359 VPGEES-NKNIEVARSGISARQRRISTRNKNHV--SNLIVLRRKKQIGSIVSPELLQNKL 529
            P E++  K +++  SG SAR+RR+ TR +  +  ++       K++ S+V PEL QN+L
Sbjct: 131 PPNEKNCKKKMQITCSGTSARRRRMDTRKRVQIPKTSAAANSASKRLRSVVGPELQQNRL 190

Query: 530 QGYVKGVVSEELLT 571
           +GY+KGVV++ELLT
Sbjct: 191 RGYMKGVVNQELLT 204