BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00001215
         (548 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [...   148   1e-33
ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao] g...   135   7e-30
ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao] g...   135   7e-30
ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citr...   131   9e-29
ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Popu...   130   2e-28
ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protei...   130   2e-28
ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-...   129   6e-28
ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [A...   128   8e-28
ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-...   120   3e-25
ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prun...   117   2e-24
ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-...   114   1e-23
ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-...   114   2e-23
ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Popu...   112   6e-23
dbj|BAA88921.1| sigma factor [Nicotiana tabacum]                      112   8e-23
ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-...   110   2e-22
ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutr...   110   3e-22
ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Caps...   107   1e-21
ref|XP_006302141.1| hypothetical protein CARUB_v10020145mg [Caps...   107   1e-21
ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phas...   107   2e-21
ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-...   107   2e-21

>ref|XP_002524027.1| RNA polymerase sigma factor rpoD, putative [Ricinus communis]
           gi|223536754|gb|EEF38395.1| RNA polymerase sigma factor
           rpoD, putative [Ricinus communis]
          Length = 508

 Score =  148 bits (373), Expect = 1e-33
 Identities = 99/189 (52%), Positives = 123/189 (65%), Gaps = 7/189 (3%)
 Frame = -2

Query: 547 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 380
           TEKL   +EHG T Y Q+ S KT LI AKK+S+ +GP FPS NR++QSI AL EH++++S
Sbjct: 26  TEKLSSANEHGLTHY-QITSTKT-LIVAKKSSN-YGPSFPSSNRNTQSIKALKEHVDTAS 82

Query: 379 VPSTT-DEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGE 203
            PST   +F    D                 A+LLLQKSMLEKQWNLSFER  +   P  
Sbjct: 83  APSTAATQFKTFNDMEEESSDLDYSVE----ALLLLQKSMLEKQWNLSFERTDSSDSPSR 138

Query: 202 ESNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVK 29
           +S K I V  SG+SARQRRI+ R KN   +   ++    KQ+ S VSPELLQN+L+GYVK
Sbjct: 139 KSQKKIPVTCSGVSARQRRINIRRKNLSQSKFTVQANVFKQLKSAVSPELLQNRLKGYVK 198

Query: 28  GVVSEELLT 2
           GVVSEELL+
Sbjct: 199 GVVSEELLS 207


>ref|XP_007029767.1| Sigma factor A isoform 2 [Theobroma cacao]
           gi|508718372|gb|EOY10269.1| Sigma factor A isoform 2
           [Theobroma cacao]
          Length = 450

 Score =  135 bits (340), Expect = 7e-30
 Identities = 85/180 (47%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
 Frame = -2

Query: 535 HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDE- 359
           +++GS+ +HQ +S K SLI AKK+S+       SNR +QSI AL EH++S+S+ ST +  
Sbjct: 34  NDYGSS-HHQTSSTK-SLIVAKKSSNCSQSLPSSNRRAQSIKALKEHVDSASIVSTAEPL 91

Query: 358 FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEV 179
           F GS D                 A+LLLQKSMLEKQW LSFER      P  + +K I V
Sbjct: 92  FQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPV 147

Query: 178 VRSGISARQRRISTRNKNHVSNLMVLR-RKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
             SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++L+GYVKGVVS+ELL+
Sbjct: 148 TCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSRLKGYVKGVVSDELLS 207


>ref|XP_007029766.1| Sigma factor A isoform 1 [Theobroma cacao]
           gi|508718371|gb|EOY10268.1| Sigma factor A isoform 1
           [Theobroma cacao]
          Length = 508

 Score =  135 bits (340), Expect = 7e-30
 Identities = 85/180 (47%), Positives = 117/180 (65%), Gaps = 2/180 (1%)
 Frame = -2

Query: 535 HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDE- 359
           +++GS+ +HQ +S K SLI AKK+S+       SNR +QSI AL EH++S+S+ ST +  
Sbjct: 34  NDYGSS-HHQTSSTK-SLIVAKKSSNCSQSLPSSNRRAQSIKALKEHVDSASIVSTAEPL 91

Query: 358 FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEV 179
           F GS D                 A+LLLQKSMLEKQW LSFER      P  + +K I V
Sbjct: 92  FQGSNDLEVESYDLDYSVE----ALLLLQKSMLEKQWTLSFERTVFTESPSRKIHKKIPV 147

Query: 178 VRSGISARQRRISTRNKNHVSNLMVLR-RKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
             SG+SARQRR +T+ K  + N  +++   KQ+ S++SPELLQ++L+GYVKGVVS+ELL+
Sbjct: 148 TCSGVSARQRRFNTKRKILIQNKSIIQPNAKQLRSLISPELLQSRLKGYVKGVVSDELLS 207


>ref|XP_006437403.1| hypothetical protein CICLE_v10031289mg [Citrus clementina]
           gi|557539599|gb|ESR50643.1| hypothetical protein
           CICLE_v10031289mg [Citrus clementina]
          Length = 508

 Score =  131 bits (330), Expect = 9e-29
 Identities = 79/168 (47%), Positives = 107/168 (63%), Gaps = 3/168 (1%)
 Frame = -2

Query: 496 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 320
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 319 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 140
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 139 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
           ++ K    N  VL++   KQ+ S++SPEL+QN L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSVLQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLT 207


>ref|XP_006371210.1| hypothetical protein POPTR_0019s06020g [Populus trichocarpa]
           gi|550316904|gb|ERP49007.1| hypothetical protein
           POPTR_0019s06020g [Populus trichocarpa]
          Length = 451

 Score =  130 bits (327), Expect = 2e-28
 Identities = 86/187 (45%), Positives = 121/187 (64%), Gaps = 6/187 (3%)
 Frame = -2

Query: 547 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 380
           TEKL   ++HG T Y+  A+ K ++I AKK+S+ +GP FPS NR+S SI AL EH++++S
Sbjct: 27  TEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKALKEHVDTAS 83

Query: 379 VPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEE 200
             S    ++ + D                EA+LLLQKSMLEKQWNLSFER  +     ++
Sbjct: 84  ASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTNSSDSTSKK 140

Query: 199 SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVKG 26
           +NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN+L+GYVKG
Sbjct: 141 NNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQNRLKGYVKG 200

Query: 25  VVSEELL 5
           VVS+E+L
Sbjct: 201 VVSDEVL 207


>ref|XP_002325882.1| RNA POLYMERASE SIGMA SUBUNIT 1 family protein [Populus trichocarpa]
           gi|222862757|gb|EEF00264.1| RNA POLYMERASE SIGMA SUBUNIT
           1 family protein [Populus trichocarpa]
          Length = 509

 Score =  130 bits (327), Expect = 2e-28
 Identities = 86/187 (45%), Positives = 121/187 (64%), Gaps = 6/187 (3%)
 Frame = -2

Query: 547 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSS 380
           TEKL   ++HG T Y+  A+ K ++I AKK+S+ +GP FPS NR+S SI AL EH++++S
Sbjct: 27  TEKLSNVNDHGIT-YYPTATTK-NVIVAKKSSN-YGPSFPSSNRNSHSIKALKEHVDTAS 83

Query: 379 VPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEE 200
             S    ++ + D                EA+LLLQKSMLEKQWNLSFER  +     ++
Sbjct: 84  ASSNVATWFKTFD---DFEEESSALDYSVEALLLLQKSMLEKQWNLSFERTNSSDSTSKK 140

Query: 199 SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVKG 26
           +NK I V  SG+SARQRR++ R KN   +  + +    K + S+ SP+LLQN+L+GYVKG
Sbjct: 141 NNKKIPVTCSGVSARQRRVNNRRKNQNQSKFMSQSSDFKFLRSVSSPDLLQNRLKGYVKG 200

Query: 25  VVSEELL 5
           VVS+E+L
Sbjct: 201 VVSDEVL 207


>ref|XP_006484698.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1 [Citrus
           sinensis] gi|568862456|ref|XP_006484699.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X2 [Citrus
           sinensis] gi|568862458|ref|XP_006484700.1| PREDICTED:
           RNA polymerase sigma factor sigA-like isoform X3 [Citrus
           sinensis]
          Length = 508

 Score =  129 bits (323), Expect = 6e-28
 Identities = 78/168 (46%), Positives = 106/168 (63%), Gaps = 3/168 (1%)
 Frame = -2

Query: 496 GKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEFWGSPDFXXXXXX 320
           G T  + A K S ++ P FPS NR +Q I AL EH++++   ++T E W  P        
Sbjct: 44  GSTKNVVAAKKSSNYNPSFPSSNRQTQPIKALKEHVDTNF--ASTAEPWAEPP--NSIEE 99

Query: 319 XXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQRRIS 140
                    EA+LLLQKSMLEKQWNLSFER      P ++++K + V  SG+SARQRR++
Sbjct: 100 ESSELDYSVEALLLLQKSMLEKQWNLSFERTVLTDSPSKKTHKKVPVTCSGVSARQRRLN 159

Query: 139 TRNKNHVSNLMVLRR--KKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
           ++ K    N  V ++   KQ+ S++SPEL+QN L+GYVKGVVSEELLT
Sbjct: 160 SKKKILSQNKSVPQQNGSKQLRSMISPELIQNHLKGYVKGVVSEELLT 207


>ref|XP_006878659.1| hypothetical protein AMTR_s00011p00266100 [Amborella trichopoda]
           gi|548832002|gb|ERM94804.1| hypothetical protein
           AMTR_s00011p00266100 [Amborella trichopoda]
          Length = 497

 Score =  128 bits (322), Expect = 8e-28
 Identities = 80/180 (44%), Positives = 109/180 (60%), Gaps = 1/180 (0%)
 Frame = -2

Query: 538 LHEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDE 359
           +++ G+TQ+  V+    S I +KK S  FGP  PSNR +Q INA+ EH+ + S  S++  
Sbjct: 31  IYDFGATQFPAVSH--KSFIVSKK-SPGFGPNSPSNRQTQYINAIKEHVNAPSSSSSSST 87

Query: 358 FWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEV 179
              +PDF                A++LLQKSMLEKQWNLSF++  T     EES K + V
Sbjct: 88  TEANPDFESSLE-----------ALILLQKSMLEKQWNLSFDQAGTSTDLCEESCKKLGV 136

Query: 178 VRSGISARQRRISTRNK-NHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
           + SG SARQRR S R   N  +  +++RRKKQ   IVSPELLQ   +GYVKG+ ++ LL+
Sbjct: 137 ISSGASARQRRNSLRRPLNQRAGTVLVRRKKQATPIVSPELLQGHFRGYVKGISNDSLLS 196


>ref|XP_004151855.1| PREDICTED: RNA polymerase sigma factor sigA-like [Cucumis sativus]
           gi|449514942|ref|XP_004164521.1| PREDICTED: RNA
           polymerase sigma factor sigA-like [Cucumis sativus]
          Length = 508

 Score =  120 bits (300), Expect = 3e-25
 Identities = 78/173 (45%), Positives = 111/173 (64%), Gaps = 4/173 (2%)
 Frame = -2

Query: 508 QVASGKTSLIFAKKTSDSFGPKFPS-NRHSQS-INALTEHLESSSVPSTTDEFWGSPDFX 335
           QV+S K+ +I   K+S +F P++PS NRHSQ  I A+ EH+E+ S P    E W +    
Sbjct: 42  QVSSSKSVVI--AKSSANFSPRYPSSNRHSQQCIKAVKEHVETPSSPIA--EPWHNTT-- 95

Query: 334 XXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISAR 155
                         EA+LLLQKSMLEKQW+LSFE+  +   P E++ K + V  SG+SAR
Sbjct: 96  -SWEDEETELKYTVEALLLLQKSMLEKQWSLSFEQTVSTDTPKEKTLKKVPVTCSGVSAR 154

Query: 154 QRRISTRNKNHVSNLMVLRRK--KQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
           QRR+S++ K    ++ + + K  KQ+   +SPELLQN+L+GYVKG++SEELL+
Sbjct: 155 QRRMSSKRKIQSKHVFMAQPKISKQLRPTISPELLQNRLKGYVKGLLSEELLS 207


>ref|XP_007219023.1| hypothetical protein PRUPE_ppa004393mg [Prunus persica]
           gi|462415485|gb|EMJ20222.1| hypothetical protein
           PRUPE_ppa004393mg [Prunus persica]
          Length = 512

 Score =  117 bits (293), Expect = 2e-24
 Identities = 83/190 (43%), Positives = 111/190 (58%), Gaps = 8/190 (4%)
 Frame = -2

Query: 547 TEKLHE----HGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESS 383
           TEKL      HG    H   S   +++ A+K S+    +FPS NR  QSI AL EH++++
Sbjct: 27  TEKLFHLNDHHGFLHCH--FSSTKNVVTARKPSNC-SSRFPSSNRPQQSIRALKEHVQTA 83

Query: 382 SVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGE 203
           S PS+  + W                    EA+LLLQKSMLEKQWNLSFE+K       +
Sbjct: 84  SAPSSATQQWFQE--LNDLEEESSDLEYSVEALLLLQKSMLEKQWNLSFEKKVLRDSTSK 141

Query: 202 ESNKNIEVVRSGISARQRRI-STRNKNHVSNLMVLR--RKKQIGSIVSPELLQNKLQGYV 32
            ++K I V  SG+SARQRR+ ST+ K    +  V+     K + +IVSPELLQN ++GYV
Sbjct: 142 TTDKKIPVTCSGVSARQRRMTSTKRKTFNKSTCVMHPSTNKPLRAIVSPELLQNHVKGYV 201

Query: 31  KGVVSEELLT 2
           KGV+SE+LLT
Sbjct: 202 KGVLSEDLLT 211


>ref|XP_003534364.1| PREDICTED: RNA polymerase sigma factor sigA-like isoform X1
           [Glycine max] gi|571478813|ref|XP_006587676.1|
           PREDICTED: RNA polymerase sigma factor sigA-like isoform
           X2 [Glycine max]
          Length = 503

 Score =  114 bits (286), Expect = 1e-23
 Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 6/183 (3%)
 Frame = -2

Query: 532 EHGSTQYHQVASGKTSLIFAKKTSDSFGPKFP-SNRHSQSINALTEHLESSSVPSTTDEF 356
           + GST Y  V +   SLI AKK+S+ + P FP SN+ +QSI AL EH++ +  P+  D +
Sbjct: 34  DFGSTHYQIVPT--KSLIAAKKSSN-YTPTFPASNQQNQSIKALKEHVDDA--PTIADSW 88

Query: 355 WGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKN---- 188
           + S +                EA+LLLQKSMLEKQWNLSFER+    V  E S+K     
Sbjct: 89  FQSCN-SNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFERE----VLTEHSSKGKKCK 143

Query: 187 -IEVVRSGISARQRRISTRNKNHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEE 11
            + V  SG+SARQRR++T+ K  +     ++ K +I    SPELLQ++L+GYVKG+VSEE
Sbjct: 144 KVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKI----SPELLQHRLKGYVKGIVSEE 199

Query: 10  LLT 2
           LL+
Sbjct: 200 LLS 202


>ref|XP_003539986.1| PREDICTED: RNA polymerase sigma factor sigA-like [Glycine max]
          Length = 503

 Score =  114 bits (284), Expect = 2e-23
 Identities = 82/183 (44%), Positives = 113/183 (61%), Gaps = 6/183 (3%)
 Frame = -2

Query: 532 EHGSTQYHQVASGKTSLIFAKKTSDSFGPKFP-SNRHSQSINALTEHLESSSVPSTTDEF 356
           + GST Y  V +   SLI AKK+S+ + P FP SN+ +QSI AL EH++ +  P+  D +
Sbjct: 34  DFGSTHYQIVPT--KSLIVAKKSSN-YTPTFPASNQQNQSIKALKEHVDDA--PTIADPW 88

Query: 355 WGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKN---- 188
           + S +                EA+LLLQKSMLEKQWNLSFER+    V  E S+K     
Sbjct: 89  FQSYN-SNDLEVESSEMGYSVEALLLLQKSMLEKQWNLSFERE----VLTENSSKGKKCR 143

Query: 187 -IEVVRSGISARQRRISTRNKNHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEE 11
            + V  SG+SARQRR++T+ K  +     ++ K +I    SPELLQ++L+GYVKG+VSEE
Sbjct: 144 KVAVTCSGVSARQRRMNTKRKTAIKTCGAMQLKSKI----SPELLQHRLKGYVKGLVSEE 199

Query: 10  LLT 2
           LL+
Sbjct: 200 LLS 202


>ref|XP_002319237.2| hypothetical protein POPTR_0013s07290g [Populus trichocarpa]
           gi|550325184|gb|EEE95160.2| hypothetical protein
           POPTR_0013s07290g [Populus trichocarpa]
          Length = 499

 Score =  112 bits (280), Expect = 6e-23
 Identities = 79/185 (42%), Positives = 113/185 (61%), Gaps = 4/185 (2%)
 Frame = -2

Query: 547 TEKL---HEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSN-RHSQSINALTEHLESSS 380
           TEKL   ++HG   Y Q+ + K S+I AKK+S  +GP FPS+ R+  S  AL E ++++S
Sbjct: 27  TEKLSNVNDHGVAHY-QITTTK-SVIVAKKSS-KYGPSFPSSYRNPHSNKALKELIDTAS 83

Query: 379 VPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEE 200
             ST   ++ + D                EA++LLQKSMLEKQWNLSFE   +     ++
Sbjct: 84  ASSTVATWFKTLD---DFEEESSVLDYSVEALILLQKSMLEKQWNLSFESINSSDSKIKK 140

Query: 199 SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVV 20
           SNK I V  SG+SARQRR++ + KN        + + +  S +SP+LL N+L+GYVKGVV
Sbjct: 141 SNKKIPVTCSGVSARQRRLNNKRKN--------QNQSKFMSDISPDLLLNRLKGYVKGVV 192

Query: 19  SEELL 5
           S+E+L
Sbjct: 193 SDEVL 197


>dbj|BAA88921.1| sigma factor [Nicotiana tabacum]
          Length = 508

 Score =  112 bits (279), Expect = 8e-23
 Identities = 73/172 (42%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
 Frame = -2

Query: 511 HQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDEFWGSPDFXX 332
           H V S K ++I AKK+SD + P   S+R SQS  +L EH++ ++ PS    ++   +   
Sbjct: 41  HHVPSIK-NVITAKKSSD-YSPSCVSSRKSQSAKSLKEHVDITADPSDVPSWF---EMYE 95

Query: 331 XXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQ 152
                        E +LLLQKSMLEKQWNLS E+  T     E+ +K + +  SG SAR+
Sbjct: 96  QLQNESDDEDESVEVLLLLQKSMLEKQWNLSLEQTLTASPQHEKKSKKMHITCSGTSARR 155

Query: 151 RRISTRNK--NHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
           RR+ +R +  +  S+       K + SI+ PELLQN+L+GYVKGVVSEELLT
Sbjct: 156 RRMDSRQRVLDRHSSATPTSAAKPLRSIIGPELLQNRLKGYVKGVVSEELLT 207


>ref|XP_004235299.1| PREDICTED: RNA polymerase sigma factor sigA-like [Solanum
           lycopersicum]
          Length = 509

 Score =  110 bits (276), Expect = 2e-22
 Identities = 72/172 (41%), Positives = 102/172 (59%), Gaps = 2/172 (1%)
 Frame = -2

Query: 511 HQVASGKTSLIFAKKTSDSFGPKFPSNRHSQSINALTEHLESSSVPSTTDEFWGSPDFXX 332
           HQV + K ++I AKK+SD + P   S+R  QS+ AL EH++ +S PS    ++    F  
Sbjct: 41  HQVPTVK-NVISAKKSSD-YSPSCVSSRKLQSVKALKEHVDIASDPSDVQSWFER--FEQ 96

Query: 331 XXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNIEVVRSGISARQ 152
                        E +LLLQKSMLEKQWNLS E   T     +++ K + +  SG SAR+
Sbjct: 97  LQNESDDEEDDSVEVLLLLQKSMLEKQWNLSAEETLTASTQRKKNCKKMHIACSGTSARR 156

Query: 151 RRISTRNK--NHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
           RR+ +R +     S+   +   K + SI+ P+LLQN+L+GYVKG+VSEELLT
Sbjct: 157 RRMDSRQRVLAQKSSATPISATKPLRSILGPDLLQNRLKGYVKGIVSEELLT 208


>ref|XP_006419162.1| hypothetical protein EUTSA_v10002486mg [Eutrema salsugineum]
           gi|557097090|gb|ESQ37598.1| hypothetical protein
           EUTSA_v10002486mg [Eutrema salsugineum]
          Length = 519

 Score =  110 bits (274), Expect = 3e-22
 Identities = 82/197 (41%), Positives = 121/197 (61%), Gaps = 15/197 (7%)
 Frame = -2

Query: 547 TEK---LHEHGSTQYHQVASGKTSLIFAKKT---SDSFGPKFPSN-RHSQSINALTEHLE 389
           TEK   +++H S+QYH +AS ++  I AKKT   S ++ P  PS+ RH+QS  AL E ++
Sbjct: 27  TEKFLSVNDHCSSQYH-IASTRSG-ITAKKTPSSSSNYSPSLPSSSRHTQSAKALKETVD 84

Query: 388 SSSVPSTTDEFWGSP--DFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVV 215
              V +++ + W  P  D                EA+LLLQKSMLEKQWNLSFE+  T  
Sbjct: 85  ---VVASSVQPWLPPGSDKEMEGESYEDDLGHSVEALLLLQKSMLEKQWNLSFEKAATSE 141

Query: 214 VPGEE--SNKNIEVVRSGISARQRRISTRNKNHVSNLMVLRR---KKQIGSIVSPELLQ- 53
            P ++  + K   V  SGISARQRRI  + K ++S++ V+      KQ+ S+++ EL Q 
Sbjct: 142 SPSKKRMTRKKNPVTCSGISARQRRIGAKKKTNMSHVKVVSEVSSGKQVKSVINSELFQN 201

Query: 52  NKLQGYVKGVVSEELLT 2
           N+++GYV+GVVSE++L+
Sbjct: 202 NRVKGYVRGVVSEDVLS 218


>ref|XP_006302143.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
           gi|482570853|gb|EOA35041.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
          Length = 521

 Score =  107 bits (268), Expect = 1e-21
 Identities = 81/201 (40%), Positives = 119/201 (59%), Gaps = 19/201 (9%)
 Frame = -2

Query: 547 TEK---LHEHGSTQYHQVASGKTSLIFAKKTSDS-FGPKFPS-NRHSQSINALTEHL--- 392
           TEK   +++H S+QYH +AS K+ +   K +S S + P FPS NRH+QS  A+TE +   
Sbjct: 26  TEKFLSVNDHCSSQYH-IASTKSGITAKKASSSSNYSPSFPSSNRHTQSAKAVTESVDVV 84

Query: 391 ---ESSSVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRT 221
              E   VP+ TD+     +F               EA+LLLQKSMLEK WNLSFE+  +
Sbjct: 85  ASTEQPWVPNVTDK-----EFEEGGYDDDVLIGHSVEALLLLQKSMLEKSWNLSFEKAAS 139

Query: 220 VVVPGEES--NKNIEVVR-SGISARQRRISTRNKNHVSNLMV---LRRKKQIGSIVSPEL 59
               G+ +   K + V+  SGISARQRRI  + K ++++      +   KQ+ S++S EL
Sbjct: 140 SESSGKRTIRKKKVPVITCSGISARQRRIGAKKKTNMTSAKAVSDVSSGKQVRSVMSSEL 199

Query: 58  LQ-NKLQ-GYVKGVVSEELLT 2
            Q N+++ GYVKGV+SE++L+
Sbjct: 200 FQHNRVRGGYVKGVISEDVLS 220


>ref|XP_006302141.1| hypothetical protein CARUB_v10020145mg [Capsella rubella]
           gi|565489005|ref|XP_006302142.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
           gi|482570851|gb|EOA35039.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
           gi|482570852|gb|EOA35040.1| hypothetical protein
           CARUB_v10020145mg [Capsella rubella]
          Length = 464

 Score =  107 bits (268), Expect = 1e-21
 Identities = 81/201 (40%), Positives = 119/201 (59%), Gaps = 19/201 (9%)
 Frame = -2

Query: 547 TEK---LHEHGSTQYHQVASGKTSLIFAKKTSDS-FGPKFPS-NRHSQSINALTEHL--- 392
           TEK   +++H S+QYH +AS K+ +   K +S S + P FPS NRH+QS  A+TE +   
Sbjct: 27  TEKFLSVNDHCSSQYH-IASTKSGITAKKASSSSNYSPSFPSSNRHTQSAKAVTESVDVV 85

Query: 391 ---ESSSVPSTTDEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRT 221
              E   VP+ TD+     +F               EA+LLLQKSMLEK WNLSFE+  +
Sbjct: 86  ASTEQPWVPNVTDK-----EFEEGGYDDDVLIGHSVEALLLLQKSMLEKSWNLSFEKAAS 140

Query: 220 VVVPGEES--NKNIEVVR-SGISARQRRISTRNKNHVSNLMV---LRRKKQIGSIVSPEL 59
               G+ +   K + V+  SGISARQRRI  + K ++++      +   KQ+ S++S EL
Sbjct: 141 SESSGKRTIRKKKVPVITCSGISARQRRIGAKKKTNMTSAKAVSDVSSGKQVRSVMSSEL 200

Query: 58  LQ-NKLQ-GYVKGVVSEELLT 2
            Q N+++ GYVKGV+SE++L+
Sbjct: 201 FQHNRVRGGYVKGVISEDVLS 221


>ref|XP_007131471.1| hypothetical protein PHAVU_011G016400g [Phaseolus vulgaris]
           gi|561004471|gb|ESW03465.1| hypothetical protein
           PHAVU_011G016400g [Phaseolus vulgaris]
          Length = 504

 Score =  107 bits (267), Expect = 2e-21
 Identities = 79/180 (43%), Positives = 106/180 (58%), Gaps = 3/180 (1%)
 Frame = -2

Query: 532 EHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPS-NRHSQSINALTEHLESSSVPSTTDEF 356
           + GST Y Q+ S K S+I AKK+S+ + P FP+ NR +QSI  L E ++ ++   T  + 
Sbjct: 34  DFGSTHY-QIVSTK-SVIVAKKSSN-YTPTFPAPNRQNQSIKVLKEIVDDAA---TVADA 87

Query: 355 WGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESN--KNIE 182
           W                    EA+LLLQKSMLEKQW+LSFE +       +E N  K   
Sbjct: 88  WFQSLSSNDLEVESSEMGYSVEALLLLQKSMLEKQWSLSFEGEGVTEHSSKEKNCRKVAA 147

Query: 181 VVRSGISARQRRISTRNKNHVSNLMVLRRKKQIGSIVSPELLQNKLQGYVKGVVSEELLT 2
           V  SG+SARQRR++ + K  V     ++ K +I    SPELLQN+L+GYVKGVVSEELL+
Sbjct: 148 VTCSGVSARQRRMNAKRKTAVKTGGAVQLKSKI----SPELLQNRLKGYVKGVVSEELLS 203


>ref|XP_004307835.1| PREDICTED: RNA polymerase sigma factor sigA-like [Fragaria vesca
           subsp. vesca]
          Length = 511

 Score =  107 bits (267), Expect = 2e-21
 Identities = 74/183 (40%), Positives = 102/183 (55%), Gaps = 4/183 (2%)
 Frame = -2

Query: 538 LHEHGSTQYHQVASGKTSLIFAKKTSDSFGPKFPSNR--HSQSINALTEHLESSSVPSTT 365
           L++HG     Q++S K  +   K +S     +FPS+   H QSI AL EH +++S PS+T
Sbjct: 34  LNDHGFVNC-QLSSTKNVVTARKSSSKYSNSRFPSSNRHHEQSIRALQEHADTASAPSST 92

Query: 364 DEFWGSPDFXXXXXXXXXXXXXXXEAILLLQKSMLEKQWNLSFERKRTVVVPGEESNKNI 185
                  +                EA+LLLQKS+LEKQWNLSFE+K +     + ++  I
Sbjct: 93  TH--QLLEEYTDLEEESSDLEYSVEALLLLQKSLLEKQWNLSFEKKLST---RKITDNKI 147

Query: 184 EVVRSGISARQRRISTRNKNHVSNLMVLR--RKKQIGSIVSPELLQNKLQGYVKGVVSEE 11
            V  SG+SARQRR+ST+ K    N   L+    K   + +SP LLQN+  GYVKGV S+ 
Sbjct: 148 PVTCSGVSARQRRMSTKRKAFSKNTSELQPSTNKYCRATISPSLLQNRTSGYVKGVTSDH 207

Query: 10  LLT 2
           LLT
Sbjct: 208 LLT 210