BLASTX nr result

ID: Papaver25_contig00001051 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00001051
         (4131 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi...    55   3e-06
gb|AAB82639.1| putative non-LTR retroelement reverse transcripta...    47   3e-06
dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]              46   9e-06
dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]              46   9e-06

>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
          Length = 1784

 Score = 54.7 bits (130), Expect(2) = 3e-06
 Identities = 31/105 (29%), Positives = 46/105 (43%)
 Frame = -2

Query: 2498 FLSETKAQANNMRLYLSHTQYPHYWFDPSIGLSGGIVVAWKQGIDFEIMHTTSDTVHAIV 2319
            FL ET+     MR   S      +  +   G+SGG+ + W + +  EI       + A V
Sbjct: 33   FLCETRQSVERMRRLRSRLGLRGFVGENCNGMSGGLALFWDESVFVEIKGINERYIDAYV 92

Query: 2318 HTHDNKPDFLVTFMYGAHNAIDNQIQWQYLMDMHNSVDLPWVLLG 2184
                N P + VTF+YG          W  L  +  S +LPW++LG
Sbjct: 93   RLSVNDPIWHVTFVYGEPRVEHRHRMWSMLNSIKQSSNLPWLVLG 137



 Score = 26.6 bits (57), Expect(2) = 3e-06
 Identities = 10/16 (62%), Positives = 11/16 (68%)
 Frame = -3

Query: 2593 MKILSWNCQGIGNPHT 2546
            M  L WNC+GIGN  T
Sbjct: 1    MSCLIWNCRGIGNAAT 16


>gb|AAB82639.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
            thaliana]
          Length = 1374

 Score = 47.0 bits (110), Expect(2) = 3e-06
 Identities = 27/105 (25%), Positives = 48/105 (45%)
 Frame = -2

Query: 2498 FLSETKAQANNMRLYLSHTQYPHYWFDPSIGLSGGIVVAWKQGIDFEIMHTTSDTVHAIV 2319
            FL ETK + N +   + H  +        IG SGG+ + WK  +  +++ +    + A++
Sbjct: 33   FLCETKKRRNYLENVVGHLGFFDLHTVEPIGKSGGLALMWKDSVQIKVLQSDKRLIDALL 92

Query: 2318 HTHDNKPDFLVTFMYGAHNAIDNQIQWQYLMDMHNSVDLPWVLLG 2184
               D   +F +T +YG     +    W+ L  +  S   PW+L G
Sbjct: 93   IWQDK--EFYLTCIYGEPVQAERGELWERLTRLGLSRSGPWMLTG 135



 Score = 34.3 bits (77), Expect(2) = 3e-06
 Identities = 15/33 (45%), Positives = 20/33 (60%)
 Frame = -3

Query: 2593 MKILSWNCQGIGNPHTRGYLHFCITTNDPDIFF 2495
            M+ILSWNCQG+GN  T  +L        P++ F
Sbjct: 1    MRILSWNCQGVGNTPTVRHLREIRGLYFPEVIF 33


>dbj|BAE79385.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 46.2 bits (108), Expect(2) = 9e-06
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = -2

Query: 2432 HYWFDPSIGLSGGIVVAWKQGIDFEIMHTTSDTVHAIV-HTHDNKPDFLVTFMYGAHNAI 2256
            H+  +P +G +GG+++ WK  ++  ++   S  +H +  H   N     +TF Y   N  
Sbjct: 57   HFIVNP-LGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGN---CFITFAYIRPNTF 112

Query: 2255 DNQIQWQYLMDMHNSVDLPWVLLG 2184
                 W+Y   + NS+  PW+++G
Sbjct: 113  AKCRFWEYCKQLANSIQSPWMVVG 136



 Score = 33.5 bits (75), Expect(2) = 9e-06
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 2593 MKILSWNCQGIGNPHTRGYLHFCITTNDPD 2504
            M+ILSWNC+GI N   R ++   ++T   D
Sbjct: 1    MRILSWNCRGIANSRVRRFVKDLLSTTKAD 30


>dbj|BAE79382.1| unnamed protein product [Ipomoea batatas]
          Length = 1366

 Score = 46.2 bits (108), Expect(2) = 9e-06
 Identities = 22/84 (26%), Positives = 42/84 (50%), Gaps = 1/84 (1%)
 Frame = -2

Query: 2432 HYWFDPSIGLSGGIVVAWKQGIDFEIMHTTSDTVHAIV-HTHDNKPDFLVTFMYGAHNAI 2256
            H+  +P +G +GG+++ WK  ++  ++   S  +H +  H   N     +TF Y   N  
Sbjct: 57   HFIVNP-LGFAGGLLLLWKPALNLSVISHNSQAIHTLASHRLGN---CFITFAYIRPNTF 112

Query: 2255 DNQIQWQYLMDMHNSVDLPWVLLG 2184
                 W+Y   + NS+  PW+++G
Sbjct: 113  AKCRFWEYCKQLANSIQSPWMVVG 136



 Score = 33.5 bits (75), Expect(2) = 9e-06
 Identities = 13/30 (43%), Positives = 19/30 (63%)
 Frame = -3

Query: 2593 MKILSWNCQGIGNPHTRGYLHFCITTNDPD 2504
            M+ILSWNC+GI N   R ++   ++T   D
Sbjct: 1    MRILSWNCRGIANSRVRRFVKDLLSTTKAD 30


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