BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00000412
         (2562 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]   228   1e-56
dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]                    202   5e-49
dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]                    201   1e-48
dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]                    201   1e-48
dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]                    201   1e-48
dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]                    201   2e-48
dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]                    201   2e-48
emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]   201   2e-48
dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]                    200   2e-48
dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|...   200   2e-48
dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]                    200   2e-48
dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|...   200   2e-48
gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidops...   200   2e-48
dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]                    199   4e-48
dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]                    199   4e-48
emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]   199   5e-48
emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]   198   9e-48
emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]   198   9e-48
gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thal...   198   1e-47
dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis th...   198   1e-47

>emb|CAN79529.1| hypothetical protein VITISV_026262 [Vitis vinifera]
          Length = 752

 Score =  228 bits (580), Expect = 1e-56
 Identities = 166/566 (29%), Positives = 259/566 (45%), Gaps = 39/566 (6%)
 Frame = +3

Query: 27   MADNTTNLRNIQIHHLVT---------------LKLTETNHFLWKTQFKPILKGYGLMGF 161
            MA NTTN  N+ +    +               +KL   N   WK QF  +L GY LMGF
Sbjct: 1    MAKNTTNKTNVSLISSTSCFDGIISINAXTQLPIKLNSNNFPFWKAQFDALLYGYDLMGF 60

Query: 162  IDGTKPKPARTL---PDSEDINPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQV 332
            +DGTK  P++ +     +   NP F+ +  QD L++  I ++L+  V+  +    +++  
Sbjct: 61   LDGTKTCPSKEIIVEYGTTVSNPNFSIWIRQDKLLLHAILASLSKGVVPLIATATSSRDA 120

Query: 333  WDKLESHFAPKTKAHQMRLKKQLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMK 512
            W KL   +A K+++  M LK++L N+    +S+  +L   K + D+ A  +  +S D++ 
Sbjct: 121  WVKLHKLYANKSRSRVMNLKEKLTNITCNTRSVAEYLQTIKGIVDELALIDTHLSDDDLT 180

Query: 513  QAISNGLNQTYDLIVTALNTIDDMDMDTFYSLLLTLNMRLEQQLAMIQQPIXXXXXXXXX 692
                NGL   +  I  A+        DT  S    L+ +LE+  A +++           
Sbjct: 181  IFALNGLGSGFKDISAAIRA-----RDTPVS-FEELHDKLEKHEAFLKR----------- 223

Query: 693  XXXRGGPRYFNQQSCGSNQVHSCFFLPNKLDAPDKPHALVVFSYLIWHQRMGHLMMRTVS 872
               RGG    N  + G++   +C               +V  S   WH R+GH   R   
Sbjct: 224  EESRGGS---NGNTMGTSPKQAC---------------VVKTSLSNWHHRLGHPSSRIFQ 265

Query: 873  SICNKFSLPV-THKQFD--FCHSCHIRXXXXXXXXXXXIVYDKPLSLFVSDIW-VSPHLS 1040
             +  K +LP+   K F   FC  C              +       L  SD+W  SP  S
Sbjct: 266  FLIRKHNLPIYPTKSFHSFFCELCLCNKSHKLPFGVSLLQSRGSFDLVYSDVWGPSPIES 325

Query: 1041 RNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRIKIFQSNNALEFK 1220
             +G+ YYL+ +  ++   W+FP+V  S+ + +F +F   VE      +    ++   E+K
Sbjct: 326  IDGFWYYLIFINYFTKYVWLFPMVYKSNVYTVFPKFKSMVEKYFKASLVTLYTDGGTEYK 385

Query: 1221 KFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIPISFCSDAFTKAC 1400
               +Y    GIQ++ S P+T    G  E + RHV E GLA+L  A + + + S AF    
Sbjct: 386  SLKSYFVSQGIQYQVSPPYTPEHVGYTERKHRHVVETGLAMLHKASLSLKYWSHAFLVVA 445

Query: 1401 YLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNKLEPRS------- 1559
            YLINRLP    +H TP E LF++ P+Y  L+ FGCL +P L PY+ +KL+ RS       
Sbjct: 446  YLINRLPTPVLKHQTPFESLFQQLPNYDKLRAFGCLCFPWLHPYSDHKLDIRSKPCVFIG 505

Query: 1560 ----------LHRETNRMYISLHVGF 1607
                      L   +NR+YIS HV F
Sbjct: 506  YSNTHNAYKCLGLSSNRVYISRHVQF 531


>dbj|BAM44532.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  202 bits (515), Expect = 5e-49
 Identities = 117/321 (36%), Positives = 165/321 (51%), Gaps = 26/321 (8%)
 Frame = +3

Query: 819  SYLIWHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYD 989
            ++ +WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   
Sbjct: 461  THCLWHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSS 519

Query: 990  KPLSLFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENL 1169
            KPL    SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN 
Sbjct: 520  KPLEYIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENR 579

Query: 1170 TDHRIKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLF 1349
               RI    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL 
Sbjct: 580  FQTRIGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLS 639

Query: 1350 HAHIPISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQP 1529
            HA +P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+P
Sbjct: 640  HASVPKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRP 699

Query: 1530 YNSNKLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQ 1640
            YN +KLE +S                 LH  T R+Y S HV F+E+ F F      +   
Sbjct: 700  YNRHKLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTS 759

Query: 1641 QKVPKPCSGNTPSDTSVFLSP 1703
            Q+     + N PS T++  +P
Sbjct: 760  QEQRSDSASNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>dbj|BAB10876.1| polyprotein [Arabidopsis thaliana]
          Length = 1429

 Score =  201 bits (511), Expect = 1e-48
 Identities = 119/331 (35%), Positives = 170/331 (51%), Gaps = 20/331 (6%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPVTH---KQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WHQR+GH  +  +  + + F LP+++   KQ   C  C I            IV  +PL 
Sbjct: 450  WHQRLGHPALPILKDVVSHFHLPLSNTIPKQLP-CSDCSINKSHKLPFFTNTIVSSQPLE 508

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               +D+W SP +S + Y+YYL+I+  ++  TW++PL + S    +FV F   VEN    R
Sbjct: 509  YLYTDVWTSPCISVDNYKYYLVIVDHFTRYTWMYPLKQKSQVKDVFVAFKALVENRFQSR 568

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I+   S+N  EF     +L   GI H  S PHT   NG+ E + RH+ E GLALL HA +
Sbjct: 569  IRTLYSDNGGEFIGLRPFLAAHGISHLTSPPHTPEHNGLAERKHRHIVETGLALLTHASL 628

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P +F + AF  A YLINR+P    + ++P   LF+ +P+Y  L+VFGCL YP L+PYN+N
Sbjct: 629  PKTFWTYAFATAVYLINRMPTEVLQGTSPYVKLFQMSPNYLKLRVFGCLCYPWLRPYNTN 688

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSFMPVQQKVPKPCSGN 1670
            KLE RS                 L   TNR+Y S HV F E  F F   +          
Sbjct: 689  KLEARSTMCVFLGYSLTQSAYLCLDIATNRIYTSRHVQFVESSFPFASPR---------T 739

Query: 1671 TPSDTSVFLSPPFRKSILPNTQEGEATQSPT 1763
            + +D++  +S P   +++P  Q       PT
Sbjct: 740  SETDSTQTMSQPTTTNVIPLLQRPPHIAPPT 770



 Score = 85.1 bits (209), Expect = 1e-13
 Identities = 48/197 (24%), Positives = 94/197 (47%), Gaps = 3/197 (1%)
 Frame = +3

Query: 84  KLTETNHFLWKTQFKPILKGYGLMGFIDGT--KPKPARTLPDSEDINPLFTDYEAQDSLI 257
           KLT TN  +W+ Q   +L GY L G++DG+  +P    T+      NP +  ++ QD LI
Sbjct: 6   KLTSTNFLMWRRQVHALLDGYDLAGYVDGSIEEPHTTVTVHGVTSPNPEYKLWKRQDKLI 65

Query: 258 VGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKKQLHNLNKGNKSLRS 437
              +   ++  V   +    T+ Q+W KL   +A  ++ H+ ++++Q+    KG++S+  
Sbjct: 66  YSGLIGAISVAVQPLLSQATTSAQIWRKLVDTYANPSRGHKQQIREQIKQWKKGSRSIDD 125

Query: 438 FLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTID-DMDMDTFYSLLL 614
           ++    T FDQ A  E  +  ++    I  GL+  Y  ++  +   D    +   +  L+
Sbjct: 126 YVLGLTTRFDQLALLEEAIPHEDQIAYILGGLSDDYRRVIDQIEGRDISPSITELHEKLI 185

Query: 615 TLNMRLEQQLAMIQQPI 665
              ++L+  +     P+
Sbjct: 186 NFELKLQAMVPDSSTPV 202


>dbj|BAM44530.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  201 bits (511), Expect = 1e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSASNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>dbj|BAM42646.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  201 bits (511), Expect = 1e-48
 Identities = 123/342 (35%), Positives = 170/342 (49%), Gaps = 32/342 (9%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTS------VFLSPPFRKSILPNTQEGEATQSP 1760
               + N PS T+      VF +PP     L  +    ++ SP
Sbjct: 764  SDSAPNWPSHTTLPTTPLVFPAPPCLGPHLDTSPRPPSSLSP 805



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>dbj|BAA78427.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  201 bits (510), Expect = 2e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSASNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>dbj|BAM44531.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  201 bits (510), Expect = 2e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWLYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSASNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>emb|CAN74695.1| hypothetical protein VITISV_024648 [Vitis vinifera]
          Length = 1424

 Score =  201 bits (510), Expect = 2e-48
 Identities = 131/374 (35%), Positives = 183/374 (48%), Gaps = 37/374 (9%)
 Frame = +3

Query: 756  SCFF---LPNKLDAPDKPHALVVFSYLIWHQRMGHLMMRTVSSICNKFSLPVTHKQFDF- 923
            SCF    LP+K   P  P A     + +WH R+GH     VS + NK +LP  +K     
Sbjct: 482  SCFASTALPSK--EPTVP-ASPTSPFTLWHNRLGHPSSHIVSLVLNKCNLPHLNKIPSLI 538

Query: 924  CHSCHIRXXXXXXXXXXXIVYDKPLSLFVSDIWVSPHL-SRNGYRYYLLIMGVYSH*TWV 1100
            C  C +              Y KPL L  +D+W      S +G++YY+  +  YS  TW+
Sbjct: 539  CSXCCMGKIHKSSFLHSTSSYTKPLELIHTDLWGPASTPSSHGHQYYIHFIDAYSRFTWI 598

Query: 1101 FPLVRHSDAFQLFVQFHKQVENLTDHRIKIFQSNNALEFKKFTAYLNESGIQHRFSYPHT 1280
            + L   S+AFQ+F+ F  QVE    H+IK  QS+   E++ FT YL  +GI HR S P+T
Sbjct: 599  YMLKHKSEAFQVFLHFKSQVELQLGHKIKAVQSDWGGEYRSFTQYLTSNGIIHRISCPYT 658

Query: 1281 SPQNGIDE*RIRHVTEFGLALLFHAHIPISFCSDAFTKACYLINRLPKSKSEHSTPLELL 1460
              QNG+ E + RH+ E G+ALL  A +P  +  +AF  + YLINRLP    ++ +PLE+L
Sbjct: 659  HEQNGLAERKHRHIVEHGIALLAQASLPFKYWDEAFRTSVYLINRLPTPVLKNKSPLEVL 718

Query: 1461 FKKTPDYTFLKVFGCLVYPCLQPYNSNKLEPRSL----------HR------ETNRMYIS 1592
            F + P Y+ LKVFGC+ YP L+P+N +KL+ RS+          H+          + IS
Sbjct: 719  FHQKPSYSXLKVFGCMCYPNLRPFNHHKLQFRSIPCTFLGYSLNHKGYKCLSPNGNILIS 778

Query: 1593 LHVGFEEKIFSFMPVQQK-----------VPKPCSGN-----TPSDTSVFLSPPFRKSIL 1724
              V F+E  F F  +Q +              PC  +      PS TS   S P   SI 
Sbjct: 779  RDVIFDEXAFPFAQLQSQKQXTSSFSSSXTSLPCQTSLPLMVLPSSTSCSTSSPTNPSIF 838

Query: 1725 PNTQEGEATQSPTP 1766
            P T          P
Sbjct: 839  PATSNHNVASQXPP 852



 Score = 97.1 bits (240), Expect = 4e-17
 Identities = 58/207 (28%), Positives = 104/207 (50%), Gaps = 5/207 (2%)
 Frame = +3

Query: 39  TTNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSED-- 212
           TT    +     V+ KL   N  + + Q    L+G+ L  F+  T   P+  L   ++  
Sbjct: 7   TTXFLPVSFPXPVSSKLDNHNFLVXRKQILTTLRGHKLQHFLSETSVLPSEFLSSDDETQ 66

Query: 213 --INPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMR 386
             +NP F D+E Q  LI+  + +++T  +L  +   +T+ QVW  LE +FA + +A   +
Sbjct: 67  NHVNPKFQDWEQQXQLIMSXLLASITDALLTRMVNCDTSAQVWKTLELYFATQVRAKVTQ 126

Query: 387 LKKQLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTAL 566
            K QLHN  KG+ S+  +L + + + D  A   + +S  +   AI  GL Q Y+  + ++
Sbjct: 127 FKTQLHNTKKGDLSISDYLLKIRNVVDLLALVGHKISVKDHIBAIFEGLPQDYETFIISV 186

Query: 567 NT-IDDMDMDTFYSLLLTLNMRLEQQL 644
           N+ +D   ++   +LLL    R+E+ +
Sbjct: 187 NSRLDPYTVEEIEALLLAQESRIEKNI 213


>dbj|BAA78426.1| polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  200 bits (509), Expect = 2e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSAPNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>dbj|BAA78424.1| polyprotein [Arabidopsis thaliana] gi|404433798|dbj|BAM44533.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1330

 Score =  200 bits (509), Expect = 2e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 320  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 378

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 379  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 438

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 439  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 498

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 499  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 558

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 559  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 618

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 619  SDSAPNWPSHTTLPTTP 635


>dbj|BAM42649.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  200 bits (509), Expect = 2e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSAPNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>dbj|BAM42647.1| polyprotein [Arabidopsis thaliana] gi|403406144|dbj|BAM42648.1|
            polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  200 bits (509), Expect = 2e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSAPNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>gb|AAC79110.1| putative polyprotein of LTR transposon [Arabidopsis thaliana]
            gi|7269781|emb|CAB77781.1| putative polyprotein of LTR
            transposon [Arabidopsis thaliana]
          Length = 1456

 Score =  200 bits (509), Expect = 2e-48
 Identities = 117/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 446  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 504

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 505  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 564

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 565  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 624

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 625  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 684

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 685  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 744

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 745  SDSAPNWPSHTTLPTTP 761



 Score = 70.5 bits (171), Expect = 4e-09
 Identities = 47/176 (26%), Positives = 80/176 (45%), Gaps = 14/176 (7%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDS--EDI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLK- 392
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRF 130

Query: 393 -----------KQLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISN 527
                      K + +  +  + L +   + K + DQ AA +   S  E+ + + N
Sbjct: 131 ITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAKDTPPSLTEIHERLIN 186


>dbj|BAM44529.1| polyprotein [Arabidopsis thaliana]
          Length = 1421

 Score =  199 bits (507), Expect = 4e-48
 Identities = 116/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  +F     YL++ GI H  S PHT   NG+ E + RH+ E GL LL HA +
Sbjct: 584  IGTLYSDNGGKFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTLLSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSASNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>dbj|BAM42650.1| Polyprotein [Arabidopsis thaliana]
          Length = 1475

 Score =  199 bits (507), Expect = 4e-48
 Identities = 116/317 (36%), Positives = 162/317 (51%), Gaps = 26/317 (8%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPV---THKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLS 1001
            WH R+GH  +  ++S+ +  SLPV   +HK    C  C I            I   KPL 
Sbjct: 465  WHSRLGHPSLAILNSVISNHSLPVLNPSHKLLS-CSDCFINKSHKVPFSNSTITSSKPLE 523

Query: 1002 LFVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               SD+W SP LS + YRYY++ +  ++  TW++PL + S     F+ F   VEN    R
Sbjct: 524  YIYSDVWSSPILSIDNYRYYVIFVDHFTRYTWLYPLKQKSQVKDTFIIFKSLVENRFQTR 583

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            I    S+N  EF     YL++ GI H  S PHT   NG+ E + RH+ E GL +L HA +
Sbjct: 584  IGTLYSDNGGEFVVLRDYLSQHGISHFTSPPHTPEHNGLSERKHRHIVEMGLTILSHASV 643

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P ++   AF+ A YLINRLP    +  +P + LF + P+Y  LKVFGC  YP L+PYN +
Sbjct: 644  PKTYWPYAFSVAVYLINRLPTPLLQLQSPFQKLFGQPPNYEKLKVFGCACYPWLRPYNRH 703

Query: 1542 KLEPRS-----------------LHRETNRMYISLHVGFEEKIFSF------MPVQQKVP 1652
            KLE +S                 LH  T R+Y S HV F+E+ F F      +   Q+  
Sbjct: 704  KLEDKSKQCAFMGYSLTQSAYLCLHIPTGRLYTSRHVQFDERCFPFSTTNFGVSTSQEQR 763

Query: 1653 KPCSGNTPSDTSVFLSP 1703
               + N PS T++  +P
Sbjct: 764  SDSAPNWPSHTTLPTTP 780



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 52/181 (28%), Positives = 84/181 (46%), Gaps = 2/181 (1%)
 Frame = +3

Query: 42  TNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSE--DI 215
           TN+ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+ P P  T+       +
Sbjct: 13  TNILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTPMPPATIGTDAVPRV 70

Query: 216 NPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKK 395
           NP +T +  QD LI   I   ++  V   V    T  Q+W+ L   +A  +  H  +L+ 
Sbjct: 71  NPDYTRWRRQDKLIYSAILGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQLRT 130

Query: 396 QLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTI 575
           QL    KG K++  ++    T FDQ A     +  DE  + +   L   Y  ++  +   
Sbjct: 131 QLKQWTKGAKTIDDYMQGFITRFDQLALLGKPMDHDEQVERVLENLPDDYKPVIDQIAAK 190

Query: 576 D 578
           D
Sbjct: 191 D 191


>emb|CAN81099.1| hypothetical protein VITISV_017741 [Vitis vinifera]
          Length = 1455

 Score =  199 bits (506), Expect = 5e-48
 Identities = 122/331 (36%), Positives = 173/331 (52%), Gaps = 18/331 (5%)
 Frame = +3

Query: 828  IWHQRMGHLMMRTVSSICNKFSLPVTHKQ-FDFCHSCHIRXXXXXXXXXXXIVYDKPLSL 1004
            +WH+R+GH    T+ ++ +K ++   +K   +FC SC +              Y KPL L
Sbjct: 523  LWHKRLGHPSAATIKNVLSKCNVAHINKMDSNFCSSCCLGKIHRFPFSLSHTTYTKPLEL 582

Query: 1005 FVSDIW-VSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHR 1181
               D+W  +  LS +GYRYY+  +  +S  +W+F L   S+A + FV F  QVE   D +
Sbjct: 583  IHLDLWGPTLVLSNSGYRYYIHFVDAFSRFSWIFLLRNKSEAIKTFVNFKTQVELQFDLK 642

Query: 1182 IKIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHI 1361
            IK  Q++   EF+ F +YL E+GI HR S PHT  QNG+ E + R + E GL LL  A +
Sbjct: 643  IKSLQTDWGGEFRAFQSYLAENGIVHRVSCPHTQQQNGVAERKHRTIVEHGLTLLHTASL 702

Query: 1362 PISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSN 1541
            P+ F  ++F    YL NRLP +   H  P+E+LFK  PDY+FLKVFGC  +P L+PYN++
Sbjct: 703  PLKFWDESFRTVVYLSNRLPTAILHHKCPIEVLFKSIPDYSFLKVFGCSCFPNLRPYNTH 762

Query: 1542 KLEPRS----------LHR------ETNRMYISLHVGFEEKIFSFMPVQQKVPKPCSGNT 1673
            KL+ RS           H+         R+YIS  V F E  F +    Q     C  +T
Sbjct: 763  KLQYRSEECTFLGYSLKHKGYKCMSSNGRVYISHDVIFNETSFPYSKTIQ--VSSCLLST 820

Query: 1674 PSDTSVFLSPPFRKSILPNTQEGEATQSPTP 1766
             S ++  LSP     +L        T  PTP
Sbjct: 821  VSPSTSHLSPSASPPVL------SPTMLPTP 845


>emb|CAN81355.1| hypothetical protein VITISV_039158 [Vitis vinifera]
          Length = 1402

 Score =  198 bits (504), Expect = 9e-48
 Identities = 112/285 (39%), Positives = 156/285 (54%), Gaps = 18/285 (6%)
 Frame = +3

Query: 828  IWHQRMGHLMMRTVSSICNKFSLPVTHKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLSLF 1007
            +WH R+GH     V+ I +  ++     +   C SC +                KPL L 
Sbjct: 485  LWHHRLGHAATDIVTRIMHNCNVSCGKYKATVCSSCQLAKSHRLPTHLSSFHASKPLELV 544

Query: 1008 VSDIWVSPHL-SRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 1184
             +DIW    + S +G +Y++L +  YS  TW++ L     A  +F  F  QVEN  + +I
Sbjct: 545  YTDIWGPASVTSTSGAKYFILFVDDYSRYTWLYLLQSKDQALPIFKXFKLQVENQFEAKI 604

Query: 1185 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 1364
            K  Q +N  EF+ F ++L ESGI HRFS P+ S QNG  E + RHV E GLALL HA +P
Sbjct: 605  KCLQXDNGGEFRSFMSFLQESGILHRFSCPYNSSQNGRVERKHRHVVETGLALLAHAGLP 664

Query: 1365 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 1544
            + F S AF  A +LINR+P     +++P   LFK+ PDY FL+VFGCL YP ++PYN++K
Sbjct: 665  LKFWSYAFQTATFLINRMPSKVLXNASPYFALFKRNPDYKFLRVFGCLCYPFIRPYNNHK 724

Query: 1545 LEPR---------SLHRE--------TNRMYISLHVGFEEKIFSF 1628
            L+ R         SLH +        T R+Y+S HV F+E  F F
Sbjct: 725  LQYRSLKCVFLGYSLHHKGYLCLDNLTGRVYVSPHVVFDETQFPF 769



 Score =  114 bits (284), Expect = 3e-22
 Identities = 67/220 (30%), Positives = 111/220 (50%), Gaps = 1/220 (0%)
 Frame = +3

Query: 63  IHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSEDINPLFTDYEA 242
           +++ + +KL  TN+ LW++Q   ++   G   FIDGT   P + L   E INP F     
Sbjct: 29  LNYSLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSVCPEKELRPGE-INPAFVAXRR 87

Query: 243 QDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKKQLHNLNKGN 422
           QD  I+ WI S+LT  ++  + G  ++   W+ LE  F+  ++A  M+L  +  +  KG+
Sbjct: 88  QDRTILSWIYSSLTPGIMAQIIGHNSSHSAWNALEKIFSSCSRARIMQLXLEFQSTKKGS 147

Query: 423 KSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTIDD-MDMDTF 599
            S+  ++ + K   D  AA    VS  +    +  GL   Y+ +VTA+N  +D + ++  
Sbjct: 148 MSMIDYIMKVKGAADSLAAIGEPVSEQDQIMNLLGGLGSDYNAVVTAINIREDKISLEAV 207

Query: 600 YSLLLTLNMRLEQQLAMIQQPIXXXXXXXXXXXXRGGPRY 719
           +S+LL    RLEQQ ++ Q P              GG +Y
Sbjct: 208 HSMLLAFEQRLEQQGSIEQLPAMSANYASXSNNRGGGRKY 247


>emb|CAN61322.1| hypothetical protein VITISV_012106 [Vitis vinifera]
          Length = 1432

 Score =  198 bits (504), Expect = 9e-48
 Identities = 116/328 (35%), Positives = 168/328 (51%), Gaps = 20/328 (6%)
 Frame = +3

Query: 828  IWHQRMGHLMMRTVSSICNKFSLPVTHKQFDFCHSCHIRXXXXXXXXXXXIVYDKPLSLF 1007
            +WH R+GH     VS + N  ++     +   C  C +                KPL L 
Sbjct: 490  LWHNRLGHASFDIVSKVMNTCNVASGKYKSFVCSDCQLAKSHRLPTQLSNFHASKPLELV 549

Query: 1008 VSDIWVSPHL-SRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 1184
             +DIW    + S +G RY++L +  YS  TW + L     A  +F  F  Q+EN  D +I
Sbjct: 550  YTDIWGPASIKSTSGARYFILFVDDYSRYTWFYSLQTKDQALPIFKXFKLQMENQFDTKI 609

Query: 1185 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 1364
            K  QS+N  EF+ FT++L   GI HRFS P+ S QNG  E + RHV E GLALL HA +P
Sbjct: 610  KCLQSDNGGEFRSFTSFLQAVGIAHRFSCPYNSXQNGRVERKHRHVVETGLALLSHASLP 669

Query: 1365 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 1544
            + +   AF    +LINR+P    E+ +P   LF++ PDY   +VFGCL YP ++PYN++K
Sbjct: 670  MKYWHYAFQTXTFLINRMPSKVLEYDSPYFTLFRRHPDYKSFRVFGCLCYPFIRPYNTHK 729

Query: 1545 LEPRS-----------------LHRETNRMYISLHVGFEEKIFSFMPVQQKVPKPCSGNT 1673
            L+ RS                 L   T R+YI+ HV F+E  F   P+ Q      S +T
Sbjct: 730  LQYRSVQCLFLGYSLNHKGFLCLDYATGRVYITPHVVFDESTF---PLAQSKSSSSSNDT 786

Query: 1674 PSD--TSVFLSPPFRKSILPNTQEGEAT 1751
             ++  T   ++PP    +LP+++   A+
Sbjct: 787  SAEGSTPALITPPSFPCLLPDSKISHAS 814



 Score =  121 bits (303), Expect = 2e-24
 Identities = 71/222 (31%), Positives = 114/222 (51%), Gaps = 1/222 (0%)
 Frame = +3

Query: 63  IHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPDSEDINPLFTDYEA 242
           ++H + +KL  TN+ LW++Q   ++   G   FIDGT   P + L     +NP F  +  
Sbjct: 32  LNHTLPVKLDRTNYILWRSQIDNVIFANGFEDFIDGTSICPEKDLSPGV-MNPAFVAWRR 90

Query: 243 QDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRLKKQLHNLNKGN 422
           QD  I+ WI S+LT  ++  + G  T+   W+ LES F+  ++A  M+L+ +L +  KG+
Sbjct: 91  QDRTILSWIYSSLTPGIMAQIIGHNTSHSAWNALESIFSSSSRARIMQLRLELQSTKKGS 150

Query: 423 KSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALNTIDD-MDMDTF 599
            S+  ++ + K   D  AA    VS  +    +  GL   Y+ +VTA+N  DD + ++  
Sbjct: 151 MSMIDYIMKIKGAADNLAAIGEPVSEQDQVMNLLGGLGSDYNAVVTAINIRDDKISLEAI 210

Query: 600 YSLLLTLNMRLEQQLAMIQQPIXXXXXXXXXXXXRGGPRYFN 725
           +S+LL    RLEQQ ++ Q               RGG R FN
Sbjct: 211 HSMLLAFEHRLEQQSSIEQM----SANYASSSNNRGGGRKFN 248


>gb|AAK62788.1|AC027036_9 polyprotein, putative [Arabidopsis thaliana]
            gi|18265373|dbj|BAB84015.1| polyprotein [Arabidopsis
            thaliana]
          Length = 1466

 Score =  198 bits (503), Expect = 1e-47
 Identities = 118/338 (34%), Positives = 168/338 (49%), Gaps = 26/338 (7%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPVTHKQFDF--CHSCHIRXXXXXXXXXXXIVYDKPLSL 1004
            WH R+GH     ++S+ + +SL V +    F  C  C I            I   +PL  
Sbjct: 467  WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 526

Query: 1005 FVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 1184
              SD+W SP LS + YRYY++ +  ++  TW++PL + S   + F+ F   +EN    RI
Sbjct: 527  IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 586

Query: 1185 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 1364
              F S+N  EF     Y ++ GI H  S PHT   NG+ E + RH+ E GL LL HA IP
Sbjct: 587  GTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP 646

Query: 1365 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 1544
             ++   AF  A YLINRLP    +  +P + LF  +P+Y  L+VFGC  YP L+PYN +K
Sbjct: 647  KTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHK 706

Query: 1545 LEPRS-----------------LHRETNRMYISLHVGFEEKIFSF-------MPVQQKVP 1652
            L+ +S                 LH +T+R+YIS HV F+E  F F        PVQ++  
Sbjct: 707  LDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRR 766

Query: 1653 KPCSGNTPSDTSVFLSPPFRKSILPNTQEGEATQSPTP 1766
            +     +P  T      P R  +LP     +   + TP
Sbjct: 767  ESSCVWSPHTTL-----PTRTPVLPAPSCSDPHHAATP 799



 Score = 88.6 bits (218), Expect = 1e-14
 Identities = 50/183 (27%), Positives = 87/183 (47%), Gaps = 2/183 (1%)
 Frame = +3

Query: 36  NTTNLRNIQIHHLVTLKLTETNHFLWKTQFKPILKGYGLMGFIDGTKPKPARTLPD--SE 209
           N T++ N+ + ++   KLT TN+ +W  Q   +  GY L GF+DG+   P  T+    + 
Sbjct: 11  NNTSILNVNMSNVT--KLTSTNYLMWSRQVHALFDGYELAGFLDGSTTMPPATIGTDAAP 68

Query: 210 DINPLFTDYEAQDSLIVGWINSTLTAEVLCHVRGLETTKQVWDKLESHFAPKTKAHQMRL 389
            +NP +T ++ QD LI   +   ++  V   V    T  Q+W+ L   +A  +  H  +L
Sbjct: 69  RVNPDYTRWKRQDKLIYSAVLGAISMSVQPAVSRATTAAQIWETLRKIYANPSYGHVTQL 128

Query: 390 KKQLHNLNKGNKSLRSFLSEAKTLFDQFAACEYIVSSDEMKQAISNGLNQTYDLIVTALN 569
           + QL    KG K++  ++    T FDQ A     +  DE  + +   L + Y  ++  + 
Sbjct: 129 RTQLKQWTKGTKTIDDYMQGLVTRFDQLALLGKPMDHDEQVERVLENLPEEYKPVIDQIA 188

Query: 570 TID 578
             D
Sbjct: 189 AKD 191


>dbj|BAA87949.1| retrotransposon homolog, partial [Arabidopsis thaliana]
          Length = 847

 Score =  198 bits (503), Expect = 1e-47
 Identities = 118/338 (34%), Positives = 168/338 (49%), Gaps = 26/338 (7%)
 Frame = +3

Query: 831  WHQRMGHLMMRTVSSICNKFSLPVTHKQFDF--CHSCHIRXXXXXXXXXXXIVYDKPLSL 1004
            WH R+GH     ++S+ + +SL V +    F  C  C I            I   +PL  
Sbjct: 432  WHARLGHPAPSILNSVISNYSLSVLNPSHKFLSCSDCLINKSNKVPFSQSTINSTRPLEY 491

Query: 1005 FVSDIWVSPHLSRNGYRYYLLIMGVYSH*TWVFPLVRHSDAFQLFVQFHKQVENLTDHRI 1184
              SD+W SP LS + YRYY++ +  ++  TW++PL + S   + F+ F   +EN    RI
Sbjct: 492  IYSDVWSSPILSHDNYRYYVIFVDHFTRYTWLYPLKQKSQVKETFITFKNLLENRFQTRI 551

Query: 1185 KIFQSNNALEFKKFTAYLNESGIQHRFSYPHTSPQNGIDE*RIRHVTEFGLALLFHAHIP 1364
              F S+N  EF     Y ++ GI H  S PHT   NG+ E + RH+ E GL LL HA IP
Sbjct: 552  GTFYSDNGGEFVALWEYFSQHGISHLTSPPHTPEHNGLSERKHRHIVETGLTLLSHASIP 611

Query: 1365 ISFCSDAFTKACYLINRLPKSKSEHSTPLELLFKKTPDYTFLKVFGCLVYPCLQPYNSNK 1544
             ++   AF  A YLINRLP    +  +P + LF  +P+Y  L+VFGC  YP L+PYN +K
Sbjct: 612  KTYWPYAFAVAVYLINRLPTPLLQLESPFQKLFGTSPNYDKLRVFGCACYPWLRPYNQHK 671

Query: 1545 LEPRS-----------------LHRETNRMYISLHVGFEEKIFSF-------MPVQQKVP 1652
            L+ +S                 LH +T+R+YIS HV F+E  F F        PVQ++  
Sbjct: 672  LDDKSRQCVFLGYSLTQSAYLCLHLQTSRLYISRHVRFDENCFPFSNYLATLSPVQEQRR 731

Query: 1653 KPCSGNTPSDTSVFLSPPFRKSILPNTQEGEATQSPTP 1766
            +     +P  T      P R  +LP     +   + TP
Sbjct: 732  ESSCVWSPHTTL-----PTRTPVLPAPSCSDPHHAATP 764