BLASTX nr result
ID: Papaver25_contig00000190
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver25_contig00000190
(5181 letters)
Database: ./nr
38,876,450 sequences; 13,856,398,315 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein A... 249 9e-77
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga... 226 2e-69
emb|CAN78035.1| hypothetical protein VITISV_031077 [Vitis vinifera] 186 1e-68
emb|CAN72890.1| hypothetical protein VITISV_022310 [Vitis vinifera] 182 6e-66
gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indi... 207 6e-66
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ... 251 1e-65
gb|AAP53315.2| retrotransposon protein, putative, unclassified [... 251 1e-65
gb|ABA98491.1| retrotransposon protein, putative, unclassified [... 250 2e-65
gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japo... 251 2e-65
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ... 248 8e-65
ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596... 163 5e-64
emb|CAN68584.1| hypothetical protein VITISV_043904 [Vitis vinifera] 158 1e-63
emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera] 169 3e-63
ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [S... 243 3e-62
gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indi... 224 9e-60
gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa ... 198 9e-60
emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulga... 233 1e-59
gb|AAD29058.1| putative non-LTR retroelement reverse transcripta... 238 2e-59
gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group] 236 6e-59
ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prun... 234 2e-58
>ref|XP_004306191.1| PREDICTED: putative ribonuclease H protein At1g65750-like [Fragaria
vesca subsp. vesca]
Length = 755
Score = 249 bits (635), Expect(3) = 9e-77
Identities = 127/343 (37%), Positives = 204/343 (59%), Gaps = 5/343 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIKHA-LVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR IQDN+I+AHEL H +K ++ + +KLDM+KA+D + W FL +L +GF W
Sbjct: 15 GRQIQDNIIVAHELFHYLKVQRSSESGSFALKLDMNKAYDRIEWSFLEAVLLKMGFAGRW 74
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
++LI+QCIST +S+L+N P FKPSRGLRQGDPLSP+L LF+ + S++L +
Sbjct: 75 VSLIKQCISTVSLSVLVNGKPGVFFKPSRGLRQGDPLSPFLFLFLNDVLSQILCKLTMVN 134
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
+LQ ++IG P ++HLFFADD L F + +L D+LH + A GQ+IN KS+++
Sbjct: 135 ILQPVQIGDLGPKVSHLFFADDSLSFLRATVFNCEVLSDVLHHYCSAFGQIINTMKSSLY 194
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F +T P I+ +LN+ + KYL +P + RS+ I + + ++QGW+
Sbjct: 195 FSPNTHPHIVQLISYMLNMKAVKDLGKYLGLPTIWSRSKVSALGYIRDTILKKIQGWKQG 254
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSP----RLITWEK 4008
+++ AG+ + V +S+ +Y M FK P+++ +Q++ ++WW N+ W
Sbjct: 255 ILSPAGKEILIKAVAASIPIYPMACFKFPKTLCNQINSALARFWWSNTSDQGVHWKDWNS 314
Query: 4009 VRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
+ PK ++N A LAK AW+L+H+ A+W ++L+
Sbjct: 315 LGAPKSVGGLGFRSLESFNLALLAKQAWRLIHSPTALWVQVLQ 357
Score = 65.5 bits (158), Expect(3) = 9e-77
Identities = 42/153 (27%), Positives = 70/153 (45%), Gaps = 7/153 (4%)
Frame = +3
Query: 4230 LIINGSLSCLTLKLLD--QEDTLVWPYTASGVFTTSSCYKLL-CQQDNI----SSTTLNL 4388
L ++ + + L+D ED L+WP+ SG +T S Y L +I +S++ ++
Sbjct: 450 LSVSDQAAIQVIPLVDTGNEDKLIWPHQQSGSYTVRSGYHLAQATMTSIPKLKASSSHSV 509
Query: 4389 SPRFWLKFWKLNMPYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHL 4568
+ W W L K +IF+WK + N + K L C +CN + E I+H+
Sbjct: 510 TSAVWKWIWNLQTLPKIKIFIWKAVSNFVATKGNLHFRHISQSSLCPICN-AFPETIEHV 568
Query: 4569 LLNCPFSRAIWRYFFPQQHTSMMQFASLLSWVQ 4667
L CP+ +W H Q +L +W+Q
Sbjct: 569 LFTCPWVVCVWFAHPFGIHVQCSQITTLDAWIQ 601
Score = 25.0 bits (53), Expect(3) = 9e-77
Identities = 7/23 (30%), Positives = 13/23 (56%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIPSLPSAL 4204
++GNG ++W W+P +L
Sbjct: 396 RIGNGCLTDMWNDKWLPQASYSL 418
>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1355
Score = 226 bits (576), Expect(3) = 2e-69
Identities = 122/344 (35%), Positives = 197/344 (57%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTK-KIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN +IA E+ H+MK + + + + MKLDMSKA+D V W FL +L +GF W
Sbjct: 547 GRLITDNALIAMEVFHSMKNRNRSRKGTIAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRW 606
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ LI + +S+ S +IN + P+RGLRQGDPLSPYL + + +AFS++++ V
Sbjct: 607 VNLIMEFVSSVTYSFIINGSVCGSVVPARGLRQGDPLSPYLFIMVADAFSKMIQRKVQDK 666
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L G K + P I+HLFFADD LLF + N + ++ D+L+ + ASGQ IN +KS +
Sbjct: 667 QLHGAKASRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVS 726
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
+ + S SQK + ILN+ Q+ EKYL IP + RS++ +++ + +LQGW+ K
Sbjct: 727 YSRGVSVSQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEK 786
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNS--PRLI---TWE 4005
L+++AG+ + V+ ++ Y M +K P ++ ++ ++WW +S R I W+
Sbjct: 787 LLSRAGKEVLLKSVIQAIPTYLMGVYKFPVFIIQKIQSAMARFWWGSSDTQRKIHWKNWD 846
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
+ K +N A L + AW+L ++ G+++K
Sbjct: 847 SMCNLKCFGGMGFKDLTIFNDALLGRQAWRLTREPQSLLGRVMK 890
Score = 60.1 bits (144), Expect(3) = 2e-69
Identities = 56/254 (22%), Positives = 101/254 (39%), Gaps = 2/254 (0%)
Frame = +3
Query: 4284 DTLVWPYTASGVFTTSSCYKLLCQQDNISSTTLNLSPRFWLKFWKLNMPYKYQIFLWKGL 4463
D L W +T ++ + Y + L+ + W+ W L++ K + FLW+
Sbjct: 1003 DELTWAFTKDATYSVKTAYMIG------KGGNLDNFHQAWVDIWSLDVSPKVRHFLWRLC 1056
Query: 4464 HNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRYFFPQQHTSMMQF 4643
+LPV++ L + D E H + +CP R +W Q S
Sbjct: 1057 TTSLPVRS-LLKHRHLTDDDLCPWGCGEIETQRHAIFDCPKMRDLWLDSGCQNLCSRDAS 1115
Query: 4644 ASLLSWVQTWQSHDSQINIHSTPRVIRIIVFIMHFIRKHRCKVIFSNLSPNHTSVIHQVS 4823
S+ + +W+S D ++ I ++ I R IF+N + + ++ +VS
Sbjct: 1116 MSMCDLLVSWRSLDGKLRIKG--------AYLAWCIWGERNAKIFNNKTTPSSVLMQRVS 1167
Query: 4824 FYIAKHQLHAASSIPAFFKYVVND--VWNPPPLNVLKINIDASYKPLSLLAGIGIIIRND 4997
+ ++ HA W PP + +K+N+DAS + G+ +I R
Sbjct: 1168 RLVEENGSHARRIYQPLVPRRTGSPRQWIAPPADSIKLNVDASL-AVDGWVGLSVIARRS 1226
Query: 4998 AGQYVSGKSTVRRV 5039
G + + VRRV
Sbjct: 1227 DGGVLF--AAVRRV 1238
Score = 28.5 bits (62), Expect(3) = 2e-69
Identities = 14/42 (33%), Positives = 23/42 (54%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIPSLPSALTDWDDLHLSNY*WVSQLFD 4261
+VGNG++IN+W+ W+ L ++ WVS+L D
Sbjct: 929 RVGNGSQINMWSDPWV--LDEGGRFLTSTPHASIRWVSELID 968
Score = 70.5 bits (171), Expect(3) = 3e-27
Identities = 58/260 (22%), Positives = 104/260 (40%), Gaps = 6/260 (2%)
Frame = +1
Query: 2101 TILLDMNHAVDVPWILIGDLNFTMHDSETRSSVNRPHHAR-HVRNFVQQLGLVDLGYSGS 2277
++L + +P +L GD N + +E NR + R+ + L L DLGY G+
Sbjct: 118 SLLRHLCEDTSLPILLGGDFNEILSAAEKEGGANRVRREMINFRDTLDTLALRDLGYVGT 177
Query: 2278 DTTWSNHRQGDEHVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFKRQ 2457
TW R + RLDR L +N W++ Y S H + SDHS I+L + + +
Sbjct: 178 WYTWERGRSPSTCIRERLDRYLCSNSWLDLYPDSVPEHTIRYKSDHSAIVLRSQRAGRPR 237
Query: 2458 SPFK---LYKCWFQIPSCNTTINQSWNHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNI 2628
+ W C + +SW + S + ++ + L W F N+
Sbjct: 238 GKTRRLHFETSWLLDDECEAVVRESWEN----SEGEVMTGRVASMGQCLVRWSTKKFKNL 293
Query: 2629 EANLY*IQTQLQLCYDNNLPATHPRTQYLTNSLQTWLSI*KE--YFMEQAGEKFLEADRN 2802
+ + L + +N + + + L L E +++ + + D+N
Sbjct: 294 SKQIETAEKALSVAQNNPISESACQECVLLEKKLDELHAKHEAYWYLRSRVAEVKDGDKN 353
Query: 2803 TSYFHSMAYFNKRISHIHAI 2862
T YFH A K+ + + +
Sbjct: 354 TKYFHHKASQRKKRNFVKGL 373
Score = 53.1 bits (126), Expect(3) = 3e-27
Identities = 26/96 (27%), Positives = 45/96 (46%)
Frame = +2
Query: 1745 MKVFSWNCQGFNNPHTRDYFRFCISQYDPDIFFISETKTQNNKMHFYLSHTKYPNYWYAP 1924
M + WNC+G NP + R +Q+ PDI F+SET ++ S + N +
Sbjct: 1 MNILCWNCRGLGNPWSVRQLRSWSNQFAPDIIFVSETMINKIEVEALKSWLGFSNAFGVA 60
Query: 1925 SIGFSGGIVFAWKNGIDLHIMHTTHNTIHSIINSHN 2032
S+G +GG+ WK + ++ + + I + N
Sbjct: 61 SVGRAGGLCLYWKEEVMFSLVSFSQHHICGDVEDGN 96
Score = 49.3 bits (116), Expect(3) = 3e-27
Identities = 24/82 (29%), Positives = 41/82 (50%), Gaps = 2/82 (2%)
Frame = +2
Query: 2879 IQDIFLAHYSSITNTYVPQHQP--DILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRP 3052
I++IF +++SSI + P ++ + P +++ N L+ DEI + + P
Sbjct: 387 IENIFTSYFSSIFTSSNPSDLSLEAVMSVIEPVVTEEHNLKLLEPFSKDEILAALQQMHP 446
Query: 3053 WASPGNDGFQAAFYQNYWDTVG 3118
+PG DG FYQ +W VG
Sbjct: 447 CKAPGPDGMHVIFYQRFWHIVG 468
>emb|CAN78035.1| hypothetical protein VITISV_031077 [Vitis vinifera]
Length = 844
Score = 186 bits (471), Expect(3) = 1e-68
Identities = 110/350 (31%), Positives = 179/350 (51%), Gaps = 8/350 (2%)
Frame = +1
Query: 3112 SWFRGRHIQDNVIIAHELLHTMKTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFH 3291
++ RGR I D +IA+E++ + + ++ K + KLD+ KA+D + W FLL +L+ +GF
Sbjct: 484 AFVRGRQILDASLIANEVIDSWQKRREKGLIC--KLDIEKAYDSINWKFLLKVLQKMGFG 541
Query: 3292 SDWIALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHV 3471
S W+ + C+S+ S+++N P+ F S+GLRQGDPLSPYL + ME L+ V
Sbjct: 542 SKWVGWMWSCLSSAKFSVMVNGVPAGFFPSSKGLRQGDPLSPYLFVMGMEVLDVLIRRAV 601
Query: 3472 DMGMLQGLKI--GKHCPA-INHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINL 3642
+ G L G I G P I+HLFFADD ++F + + L +L F ASG INL
Sbjct: 602 EGGFLSGCNIRGGSESPLHISHLFFADDTIIFCEARKDHLTHLSWILFWFEAASGLKINL 661
Query: 3643 QKSTIFFGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRL 3822
KS I ++ ++ L + +YL +PL + G+ + RL
Sbjct: 662 AKSEIIPVGEVVGMEELAVE--LGCKVGSLPSQYLGLPLGVLNKAPYMWDGVEERVRRRL 719
Query: 3823 QGWQSKLVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSP 3987
W+ + +++ GR + L+SM +YQM F++P+ V +++K+ R + W
Sbjct: 720 ALWKRQYISKGGRVILIKSTLASMPIYQMSLFRMPKMVARRLEKVQRDFLWGGGQMEGKT 779
Query: 3988 RLITWEKVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
L+ WE V K N A L K W+ ++D +W +++K
Sbjct: 780 HLVNWEVVCTDKTKGGLGIRKLALLNKALLGKWIWRYASDKDNLWKQVIK 829
Score = 92.8 bits (229), Expect(3) = 1e-68
Identities = 68/244 (27%), Positives = 110/244 (45%), Gaps = 9/244 (3%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHARHVRNFVQQLGLVDLGYSGSDTTWSN--HRQGD 2310
PW + GD N T+ E R+ V LGLVDL G D TW+ H Q
Sbjct: 104 PWCIGGDFNITLFSRERSGQRRISSAMRNFAEIVDDLGLVDLPLQGGDFTWNGGLHNQ-- 161
Query: 2311 EHVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFKRQSPFKLYKCWFQ 2490
+ RLDR +V+ WI+ ++ L SDH PI+L + +PF+ W +
Sbjct: 162 --TWARLDRFMVSPSWIDQFSGINQCRLPRPVSDHFPIMLVGGGIRQGPTPFRFENMWLK 219
Query: 2491 IPSCNTTINQSWNH-HFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY*IQTQLQL 2667
+ W GS Y+ ++K+K IK +L+ W + FG +E+N Q++
Sbjct: 220 AEGFKELVRSWWQGIDVRGSASYKLATKMKEIKQKLKVWNREVFGKLESNKSAALQQVEF 279
Query: 2668 C--YDNNLPATHPRTQY---LTNSLQTWLSI*KEYFMEQAGEKFL-EADRNTSYFHSMAY 2829
+N+ T + + + W+ + + ++ + + E +L E DRNT +FH MA
Sbjct: 280 WDREENDRILTMEEVELKKEAKENYKKWVIMEETHWRQLSREIWLKEGDRNTGFFHRMAS 339
Query: 2830 FNKR 2841
+ R
Sbjct: 340 AHHR 343
Score = 33.9 bits (76), Expect(3) = 1e-68
Identities = 21/63 (33%), Positives = 31/63 (49%)
Frame = +2
Query: 2945 DILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDGFQAAFYQNYWDTVGLE 3124
DI L IS E + L R +EI+ + + +PG DGF AF+Q+ W+
Sbjct: 384 DIGSLQLDQISQEEAEMLKRPFTEEEIQGALMEMNGDKAPGPDGFTLAFWQSCWEFKCGA 443
Query: 3125 EDI 3133
ED+
Sbjct: 444 EDL 446
>emb|CAN72890.1| hypothetical protein VITISV_022310 [Vitis vinifera]
Length = 1356
Score = 182 bits (461), Expect(3) = 6e-66
Identities = 111/350 (31%), Positives = 177/350 (50%), Gaps = 8/350 (2%)
Frame = +1
Query: 3112 SWFRGRHIQDNVIIAHELLHTMKTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFH 3291
++ RGR I D +IA+E++ + + +K K + KLD+ KA+D + W FLL +L+ +GF
Sbjct: 566 AFVRGRQILDASLIANEVIDSWQKRKEKGLIC--KLDIEKAYDSINWKFLLKVLQKMGFG 623
Query: 3292 SDWIALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHV 3471
S W+ + C+S+ S+++N P+ F S+GLRQGDPLSPYL + ME L+ V
Sbjct: 624 SKWVRWMWSCLSSAKFSVMVNGVPAGFFPSSKGLRQGDPLSPYLFVMGMEVLDVLIRKAV 683
Query: 3472 DMGMLQGLKI--GKHCPA-INHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINL 3642
+ G L G I G P I+HL FA D ++F + L +L F ASG INL
Sbjct: 684 EEGFLSGCNIRGGSEPPLNISHLXFAXDTIIFCXARKDHLTHLSWILFWFEAASGLRINL 743
Query: 3643 QKSTIFFGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRL 3822
KS I ++ ++ L + +YL +PL + G+ + RL
Sbjct: 744 AKSEIIPXGEVVEMEELAVE--LGCRVGSLPSQYLGLPLGVLNRAPYMWDGVEERVRRRL 801
Query: 3823 QGWQSKLVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSP 3987
W+ + +++ GR T + LSSM +YQM F++P+ V +++K+ R + W
Sbjct: 802 ALWKRQYISKGGRVTLIKSTLSSMPIYQMSIFRMPKMVARRLEKVQRDFLWGXGNMEGKT 861
Query: 3988 RLITWEKVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
L+ WE V K N A L K W+ ++D +W +++K
Sbjct: 862 HLVNWEVVCTDKDKGGLGIRKLAMLNKALLGKWIWRYACDKDNLWKQVIK 911
Score = 99.0 bits (245), Expect(3) = 6e-66
Identities = 71/250 (28%), Positives = 115/250 (46%), Gaps = 7/250 (2%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHARHVRNFVQQLGLVDLGYSGSDTTWSNHRQGDEH 2316
PW + GD N T+ SE S R V LGLVDL G D TW+ +
Sbjct: 187 PWCIGGDFNITLFSSERSSQRRISSAMRKFAETVNDLGLVDLPLQGGDFTWNGGL--NNQ 244
Query: 2317 VFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFKRQSPFKLYKCWFQIP 2496
+ RLDR LV+ WI+ ++ L SDH PI+L + +PF+ W +
Sbjct: 245 TWARLDRFLVSPSWIDQFSGINQCRLPRPVSDHFPIMLVGGGIRRGPTPFRFENMWLKAE 304
Query: 2497 SCNTTINQSWNH-HFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY*IQTQLQLC- 2670
+ W GS Y+ ++K+K IK +L+ W + FG +E N Q++
Sbjct: 305 GFKELVRSWWQGIDVRGSASYKLATKMKEIKQKLKVWNREVFGKLECNKSAALQQVEFWD 364
Query: 2671 -YDNNLPATHPRTQY---LTNSLQTWLSI*KEYFMEQAGEKFL-EADRNTSYFHSMAYFN 2835
+N+ T T+ + + W+ + + ++ + + E +L E DRNT +FH MA +
Sbjct: 365 REENDRILTMEETELKKEAKENYRKWVIMEETHWRQLSREIWLKEGDRNTGFFHRMASAH 424
Query: 2836 KRISHIHAIQ 2865
+R + + I+
Sbjct: 425 RRNNFMERIK 434
Score = 22.3 bits (46), Expect(3) = 6e-66
Identities = 17/61 (27%), Positives = 23/61 (37%)
Frame = +2
Query: 2945 DILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDGFQAAFYQNYWDTVGLE 3124
DI L IS E + L R EI + + +PG DGF + G E
Sbjct: 467 DIGSLQFDQISQEEAEJLERPFTEXEIHGALMEMNGDKAPGPDGFYSGLLAKLLGKCGXE 526
Query: 3125 E 3127
+
Sbjct: 527 D 527
>gb|EEC83100.1| hypothetical protein OsI_28249 [Oryza sativa Indica Group]
Length = 1300
Score = 207 bits (526), Expect(3) = 6e-66
Identities = 111/344 (32%), Positives = 181/344 (52%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTM-KTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN ++A E H + K + +A KLD+SKA+D V W FL + +GF W
Sbjct: 465 GRLITDNALLAFECFHFIQKNRSPNNAACAYKLDLSKAYDRVDWRFLEQAMYKMGFAHRW 524
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
++ I CI+T ++ N T + F P+RGLRQGDPLSP+L LF+ + S LLE V+ G
Sbjct: 525 VSWIMSCITTVRYAIKFNGTLLSTFAPTRGLRQGDPLSPFLFLFVADGLSLLLEEKVNQG 584
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
+ ++I + P I+HL FADD LLF + N Q ++ +L ++ ++GQ++N K +I
Sbjct: 585 AISPVRICRRAPGISHLLFADDTLLFLKSNKEQAEIINSVLGDYAASTGQLVNPSKCSIM 644
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
FG+ T S++T I L ++ +KYL P R + + + R+ W
Sbjct: 645 FGEATPLSEQTDIKATLQITNNVFEDKYLGFPTPDGRMHKGKFQSLHERVWKRIIQWGEN 704
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSPRLITWE 4005
++ G+ + V+ ++ +Y M FKLP+SV + K R +WW W+
Sbjct: 705 FLSSGGKEVLIKSVMQALPVYVMGIFKLPDSVCEDLSKAVRNFWWGAGDGKRRTHWRAWD 764
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
+ PK+ +N A LA+ +W++L +++ ++LK
Sbjct: 765 SLTKPKQCGGMGFRDFRLFNQALLARQSWRILEFPESLCARVLK 808
Score = 68.2 bits (165), Expect(3) = 6e-66
Identities = 62/268 (23%), Positives = 110/268 (41%), Gaps = 23/268 (8%)
Frame = +3
Query: 4278 QEDTLVWPYTASGVFTTSSCYKLLCQQDNI----SSTTLNLSPRFWLKFWKLNMPYKYQI 4445
+ D + W G F+ S Y L N+ SS+ LS + W + W ++P K +I
Sbjct: 919 ENDFVAWHSDKLGRFSVRSAYHLALSLSNVVASSSSSGQELS-KAWNQLWSCHVPQKVRI 977
Query: 4446 FLWKGLHNALPVKARLFTPMNYVDQQCVLCN--SSHSEDIDHLLLNCPFSRAIWRYFFPQ 4619
F+W+ N+L A + + C +C+ + ED+ H L CP ++ +W
Sbjct: 978 FIWRAASNSL---ATMVNKKKKRLEHCSMCSICGTEEEDVAHALCRCPHAKYLWEV---M 1031
Query: 4620 QHTSMMQFASLLSWVQTWQSHDSQINIHSTPR-VIRIIVFIMHFIRKH--------RCKV 4772
+ + + +W D I R + ++++ + ++R +V
Sbjct: 1032 RRAKAITVQADRNWTGADWIFDISERISKEERPTLLMMLWRIWYVRNEITHGKAAVPAEV 1091
Query: 4773 IFSNLSPNHTSVIHQVSFYIA-----KHQLHAASSIPAFFKYVVNDV---WNPPPLNVLK 4928
+S TS++ F A KH + A++ VN V W P +K
Sbjct: 1092 SQRFISSYITSLLEIRQFPDANLCKGKHVIRCAAAGAQVNHPRVNSVPVRWVRPQAGWMK 1151
Query: 4929 INIDASYKPLSLLAGIGIIIRNDAGQYV 5012
+N+D SY P GIG ++RN G+ +
Sbjct: 1152 LNVDGSYDPRDGSGGIGAVLRNSEGKLI 1179
Score = 28.1 bits (61), Expect(3) = 6e-66
Identities = 16/42 (38%), Positives = 19/42 (45%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIPSLPSALTDWDDLHLSNY*WVSQLFD 4261
+VGNG I IW WIP + S WVS+L D
Sbjct: 847 RVGNGRTIRIWRDPWIPR-DFSRRPITHKGTSRVKWVSELLD 887
>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
Length = 1509
Score = 251 bits (640), Expect(2) = 1e-65
Identities = 129/344 (37%), Positives = 198/344 (57%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIKHA-LVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN++IA+E+ H M+ K+ KLDMSKA+D V W FL D++ LGFH+DW
Sbjct: 744 GRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDW 803
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ LI +C+ST + +N S F P RGLRQGDPLSPYL L E FS LL + G
Sbjct: 804 VNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEG 863
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L G++I + P+++HL FADD L+ + N + L+ +L I+ + SGQVIN KS +
Sbjct: 864 RLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 923
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F +TS +K ++ LN+ + EKYL +P+ + RSR K + + R+QGW+ K
Sbjct: 924 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 983
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSPR-----LITWE 4005
L+++AG+ + V + + M F+L + + Q+ K+ +YWW N + ++W
Sbjct: 984 LLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWN 1043
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
K+ LPK +N A LAK W+L+ + D++ ++L+
Sbjct: 1044 KLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLR 1087
Score = 30.4 bits (67), Expect(2) = 1e-65
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIP 4186
+VG+G++INIW WIP
Sbjct: 1126 RVGDGSKINIWADPWIP 1142
Score = 76.3 bits (186), Expect = 1e-10
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Frame = +3
Query: 4272 LDQEDTLVWPYTASGVFTTSSCYKLLCQQDNISSTT--------LNLSPRFWLKFWKLNM 4427
++ ED L W + A G FT S YK+ + + +S + FW K WKL +
Sbjct: 1196 VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1255
Query: 4428 PYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRY 4607
P K + FLW+ HN L ++A L VD +CV+C ++ED HL C + +W+
Sbjct: 1256 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMC-GRYNEDAGHLFFKCKPVKKVWQA 1314
Query: 4608 FFPQQHTSMMQ 4640
++ SM++
Sbjct: 1315 LNLEELRSMLE 1325
Score = 63.2 bits (152), Expect = 1e-06
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 8/186 (4%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHAR-HVRNFVQQLGLVDLGYSGSDTTWSNHRQGDE 2313
PW++ GD N + E + + A R+ + GL DLG+ G TW NH E
Sbjct: 422 PWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQE 481
Query: 2314 -HVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFK------RQSPFKL 2472
++ LDRA+ N W + A+ + + P SDH P+I+ K + F+
Sbjct: 482 GYIREWLDRAVANPEWRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHNDFRF 541
Query: 2473 YKCWFQIPSCNTTINQSWNHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY*IQ 2652
W + + ++W+ G + L + L W G++E L ++
Sbjct: 542 EAAWLEEEKFKEVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVK 600
Query: 2653 TQLQLC 2670
+L+ C
Sbjct: 601 KELETC 606
>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1505
Score = 251 bits (640), Expect(2) = 1e-65
Identities = 129/344 (37%), Positives = 198/344 (57%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIKHA-LVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN++IA+E+ H M+ K+ KLDMSKA+D V W FL D++ LGFH+DW
Sbjct: 740 GRLISDNILIAYEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDW 799
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ LI +C+ST + +N S F P RGLRQGDPLSPYL L E FS LL + G
Sbjct: 800 VNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEG 859
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L G++I + P+++HL FADD L+ + N + L+ +L I+ + SGQVIN KS +
Sbjct: 860 RLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 919
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F +TS +K ++ LN+ + EKYL +P+ + RSR K + + R+QGW+ K
Sbjct: 920 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 979
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSPR-----LITWE 4005
L+++AG+ + V + + M F+L + + Q+ K+ +YWW N + ++W
Sbjct: 980 LLSRAGKEILIKAVAQVIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWN 1039
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
K+ LPK +N A LAK W+L+ + D++ ++L+
Sbjct: 1040 KLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLR 1083
Score = 30.4 bits (67), Expect(2) = 1e-65
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIP 4186
+VG+G++INIW WIP
Sbjct: 1122 RVGDGSKINIWADPWIP 1138
Score = 76.3 bits (186), Expect = 1e-10
Identities = 41/131 (31%), Positives = 65/131 (49%), Gaps = 8/131 (6%)
Frame = +3
Query: 4272 LDQEDTLVWPYTASGVFTTSSCYKLLCQQDNISSTT--------LNLSPRFWLKFWKLNM 4427
++ ED L W + A G FT S YK+ + + +S + FW K WKL +
Sbjct: 1192 VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1251
Query: 4428 PYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRY 4607
P K + FLW+ HN L ++A L VD +CV+C ++ED HL C + +W+
Sbjct: 1252 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMC-GRYNEDAGHLFFKCKPVKKVWQA 1310
Query: 4608 FFPQQHTSMMQ 4640
++ SM++
Sbjct: 1311 LNLEELRSMLE 1321
Score = 63.2 bits (152), Expect = 1e-06
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 8/186 (4%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHAR-HVRNFVQQLGLVDLGYSGSDTTWSNHRQGDE 2313
PW++ GD N + E + + A R+ + GL DLG+ G TW NH E
Sbjct: 418 PWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQE 477
Query: 2314 -HVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFK------RQSPFKL 2472
++ LDRA+ N W + A+ + + P SDH P+I+ K + F+
Sbjct: 478 GYIREWLDRAVANPEWRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHNDFRF 537
Query: 2473 YKCWFQIPSCNTTINQSWNHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY*IQ 2652
W + + ++W+ G + L + L W G++E L ++
Sbjct: 538 EAAWLEEEKFKEVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVK 596
Query: 2653 TQLQLC 2670
+L+ C
Sbjct: 597 KELETC 602
>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
Japonica Group]
Length = 1621
Score = 250 bits (638), Expect(2) = 2e-65
Identities = 128/344 (37%), Positives = 198/344 (57%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIKHA-LVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN++IA E+ H M+ K+ KLDMSKA+D V W FL D++ LGFH+DW
Sbjct: 799 GRLISDNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMILKLGFHTDW 858
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ LI +C+ST + +N S F P RGLRQGDPLSPYL L E FS LL + G
Sbjct: 859 VNLIMKCVSTVTYRIRVNGELSESFSPGRGLRQGDPLSPYLFLLCAEGFSALLSKTEEEG 918
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L G++I + P+++HL FADD L+ + N + L+ +L I+ + SGQVIN KS +
Sbjct: 919 RLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 978
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F +TS +K ++ LN+ + E+YL +P+ + RSR K + + R+QGW+ K
Sbjct: 979 FSPNTSSLEKRAVMAALNMQRETTNERYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1038
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSPR-----LITWE 4005
L+++AG+ + V ++ + M F+L + + Q+ K+ +YWW N + ++W
Sbjct: 1039 LLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWN 1098
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
K+ LPK +N A LAK W+L+ + D++ ++L+
Sbjct: 1099 KLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLR 1142
Score = 30.4 bits (67), Expect(2) = 2e-65
Identities = 10/17 (58%), Positives = 14/17 (82%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIP 4186
+VG+G++INIW WIP
Sbjct: 1181 RVGDGSKINIWADPWIP 1197
Score = 78.2 bits (191), Expect(2) = 6e-17
Identities = 61/258 (23%), Positives = 112/258 (43%), Gaps = 15/258 (5%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHAR-HVRNFVQQLGLVDLGYSGSDTTWSNHRQGDE 2313
PW++ GD N + E + + A R+ + GL DLG+ G TW NH E
Sbjct: 377 PWLMAGDFNEILFSHEKQGGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQE 436
Query: 2314 -HVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFK------RQSPFKL 2472
++ RLDRA+ N W + A+ + + P SDH P+I+ K + F+
Sbjct: 437 GYIRERLDRAVANPEWRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHNDFRF 496
Query: 2473 YKCWFQIPSCNTTINQSW--NHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY* 2646
W + + ++W + G P++ + L + L W G++E +
Sbjct: 497 EAAWLEEEKFKEVVKEAWDVSAGLQGLPVH---ASLAGVAAGLSSWSSNVLGDLEKRVKK 553
Query: 2647 IQTQLQLC----YDNNLPATHPRTQYLTNSLQTWLSI*KEYFMEQAGEKFL-EADRNTSY 2811
++ +L+ C + +Y L+ + I Y+ ++A +L + DRNTS+
Sbjct: 554 VKKELETCRRQPISRDQVVREEVLRYRLEKLEQQVDI---YWKQRAHTNWLNKGDRNTSF 610
Query: 2812 FHSMAYFNKRISHIHAIQ 2865
FH+ +R + I+ ++
Sbjct: 611 FHASCSERRRRNRINKLR 628
Score = 39.7 bits (91), Expect(2) = 6e-17
Identities = 21/82 (25%), Positives = 39/82 (47%)
Frame = +2
Query: 2873 KDIQDIFLAHYSSITNTYVPQHQPDILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRP 3052
+D + + + + + + Q+ +L + +S + N+ L +E+KE + I
Sbjct: 639 EDKRAMIIEFFKQLFTSNGGQNSQKLLDVVDRKVSGAMNESLRAEFTREEVKEALDAIGD 698
Query: 3053 WASPGNDGFQAAFYQNYWDTVG 3118
+PG DG A FY+ WD VG
Sbjct: 699 LKAPGPDGMPAGFYKACWDVVG 720
Score = 91.7 bits (226), Expect = 3e-15
Identities = 73/310 (23%), Positives = 127/310 (40%), Gaps = 11/310 (3%)
Frame = +3
Query: 4272 LDQEDTLVWPYTASGVFTTSSCYKLLCQQDNISSTT--------LNLSPRFWLKFWKLNM 4427
++ ED L W + A G FT S YK+ + + +S + FW K WKL +
Sbjct: 1251 VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1310
Query: 4428 PYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRY 4607
P K + FLW+ HN L ++A L VD +CV+C ++ED HL C + +W+
Sbjct: 1311 PGKIKHFLWRMCHNTLALRANLHHRGMDVDTRCVMC-GRYNEDAGHLFFKCKPVKKVWQA 1369
Query: 4608 FFPQQHTSMMQFASLLSWVQTWQSHDSQINIHSTPRVIRIIVFI-MHFIRKHRCKVIFSN 4784
++ SM++ Q + +I+ P R + + K R +V
Sbjct: 1370 LNLEELRSMLE--------QQTSGKNVLQSIYCRPENERTSAIVCLWQWWKERNEVREGG 1421
Query: 4785 LSPNHTSVIHQVSFYIAKH-QLHAASSIPAFFKYVVNDVWNPPPLNVLKINIDASYKPLS 4961
+ + + H + + +++ P + VW PPLN +KIN D +Y
Sbjct: 1422 IPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECA---VWRRPPLNFVKINTDGAYSSNM 1478
Query: 4962 LLAGIGIIIRNDAGQYV-SGKSTVRRVIDIHQXXXXXXXXXXXXXTSNGWSNVVFETDNL 5138
G G +I++ G + +G + D + G S + ETD++
Sbjct: 1479 KQGGWGFVIKDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETDSM 1538
Query: 5139 NISSYVNNQS 5168
+ + + S
Sbjct: 1539 MLRYAIQDNS 1548
>gb|EEE50824.1| hypothetical protein OsJ_31232 [Oryza sativa Japonica Group]
Length = 1594
Score = 251 bits (640), Expect(2) = 2e-65
Identities = 129/344 (37%), Positives = 198/344 (57%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIKHA-LVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN++IA E+ H M+ K+ KLDMSKA+D V W FL D++ LGFH+DW
Sbjct: 772 GRLISDNILIADEMTHYMRNKRSGQVGYAAFKLDMSKAYDRVEWSFLHDMMLKLGFHTDW 831
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ LI +C+ST + +N S F P RGLRQGDPLSPYL L E FS LL + G
Sbjct: 832 VNLIMKCVSTVTYRIRVNGELSESFSPERGLRQGDPLSPYLFLLCAEGFSALLSKTEEEG 891
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L G++I + P+++HL FADD L+ + N + L+ +L I+ + SGQVIN KS +
Sbjct: 892 RLHGIRICQGAPSVSHLLFADDSLILCRANGGEAQQLQTILQIYEECSGQVINKDKSAVM 951
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F +TS +K ++ LN+ + EKYL +P+ + RSR K + + R+QGW+ K
Sbjct: 952 FSPNTSSLEKGAVMAALNMQRETTNEKYLGLPVFVGRSRTKIFSYLKERIWQRIQGWKEK 1011
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSPR-----LITWE 4005
L+++AG+ + V ++ + M F+L + + Q+ K+ +YWW N + ++W
Sbjct: 1012 LLSRAGKEILIKAVAQAIPTFAMGCFELTKDLCDQISKMIAKYWWSNQEKDNKMHWLSWN 1071
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
K+ LPK +N A LAK W+L+ + D++ ++L+
Sbjct: 1072 KLTLPKNMGGLGFRDIYIFNLAMLAKQGWRLIQDPDSLCSRVLR 1115
Score = 29.3 bits (64), Expect(2) = 2e-65
Identities = 9/17 (52%), Positives = 14/17 (82%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIP 4186
++G+G++INIW WIP
Sbjct: 1154 RMGDGSKINIWADPWIP 1170
Score = 94.4 bits (233), Expect = 5e-16
Identities = 74/310 (23%), Positives = 128/310 (41%), Gaps = 11/310 (3%)
Frame = +3
Query: 4272 LDQEDTLVWPYTASGVFTTSSCYKLLCQQDNISSTT--------LNLSPRFWLKFWKLNM 4427
++ ED L W + A G FT S YK+ + + +S + FW K WKL +
Sbjct: 1224 VEMEDVLAWHFDARGCFTVKSAYKVQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGV 1283
Query: 4428 PYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRY 4607
P K + FLW+ HN L ++A L VD +CV+C ++ED HL C + +W+
Sbjct: 1284 PGKIKHFLWRMCHNTLALRANLQHRGMDVDTRCVMC-GRYNEDAGHLFFKCKPVKKVWQA 1342
Query: 4608 FFPQQHTSMMQFASLLSWVQTWQSHDSQINIHSTPRVIRIIVFI-MHFIRKHRCKVIFSN 4784
++ SM++ Q + +I+ P + R + + K R +V
Sbjct: 1343 LNLEELRSMLE--------QQTSGKNVLQSIYCRPEIERTSAIVCLWQWWKERNEVREGG 1394
Query: 4785 LSPNHTSVIHQVSFYIAKH-QLHAASSIPAFFKYVVNDVWNPPPLNVLKINIDASYKPLS 4961
+ + + H + + +++ P + VW PPLN +KIN D +Y
Sbjct: 1395 IPRSPAELSHLIMSQAGEFVRMNVKEKSPRTGECA---VWRRPPLNFVKINTDGAYSSNM 1451
Query: 4962 LLAGIGIIIRNDAGQYV-SGKSTVRRVIDIHQXXXXXXXXXXXXXTSNGWSNVVFETDNL 5138
G G +IR+ G + +G + D + G S + ETD++
Sbjct: 1452 KQGGWGFVIRDQTGAVLQAGAGPAAYLQDAFHAEVVACAAAIKTASERGMSRIELETDSM 1511
Query: 5139 NISSYVNNQS 5168
+ + + S
Sbjct: 1512 MLRYAIQDNS 1521
Score = 63.2 bits (152), Expect = 1e-06
Identities = 45/186 (24%), Positives = 77/186 (41%), Gaps = 8/186 (4%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHAR-HVRNFVQQLGLVDLGYSGSDTTWSNHRQGDE 2313
PW++ GD N + E + + A R+ + GL DLG+ G TW NH E
Sbjct: 425 PWLMAGDFNEILFSHEKQCGRMKAQSAMDEFRHALTDCGLDDLGFEGDAFTWRNHSHSQE 484
Query: 2314 -HVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFK------RQSPFKL 2472
++ LDRA+ N W + A+ + + P SDH P+I+ K + F+
Sbjct: 485 GYIREWLDRAVANPEWRAMFPAARVINGDPRHSDHRPVIIELEGKNKGVRGRNGHNDFRF 544
Query: 2473 YKCWFQIPSCNTTINQSWNHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY*IQ 2652
W + + ++W+ G + L + L W G++E L ++
Sbjct: 545 EAAWLEEEKFKEVVKEAWDVS-AGLQGLLVHASLAGVAAGLSSWSSNVLGDLEKRLKKVK 603
Query: 2653 TQLQLC 2670
+L+ C
Sbjct: 604 KELETC 609
>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1656
Score = 248 bits (632), Expect(2) = 8e-65
Identities = 132/358 (36%), Positives = 209/358 (58%), Gaps = 8/358 (2%)
Frame = +1
Query: 3088 FLSKLLG---YSWFRGRHIQDNVIIAHELLHTMK-TKKIKHALVGMKLDMSKAFDGV*WP 3255
F+S+L+ ++ R IQDNVIIAHE+ H +K T+ + G+KLDM+KA+D V W
Sbjct: 1137 FMSELISDNQSAFVSNRQIQDNVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVEWN 1196
Query: 3256 FLLDILRHLGFHSDWIALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFI 3435
FL +LR +GF WI L+ C++T+ +S+LIN P F PSRGLRQGDPLSP+L LF+
Sbjct: 1197 FLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPLSPFLFLFV 1256
Query: 3436 MEAFSRLLEHHVDMGMLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFS 3615
+ SR++ +L + IG + ++HLFFADD L F + L DLLH +
Sbjct: 1257 NDVLSRMINKMCQDSLLTPVTIGPNNLPVSHLFFADDSLFFLRATLQNCETLSDLLHTYC 1316
Query: 3616 QASGQVINLQKSTIFFGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHG 3795
ASGQ+IN++KS+IFF +T P ++ I+ + + YL +P HRS++K
Sbjct: 1317 IASGQLINVEKSSIFFSPNTPPEIAHLLSSIMQIPVVSDPGTYLGLPTFWHRSKKKALGF 1376
Query: 3796 ILNNMNIRLQGWQSKLVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW 3975
I +++ +++GW+ ++QAG+ + V +++ Y M FK P ++ +++ I +WW
Sbjct: 1377 IKDSILRKVKGWKQATLSQAGKEVLIKAVATAIPAYPMGCFKFPSTLCKELNGILADFWW 1436
Query: 3976 HN-SPRLI---TWEKVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
N R I +W+ + PK+ ++N + LAK AW+L N A+W ++L+
Sbjct: 1437 GNVDTRGIHWKSWDFLARPKKDGGMGFRNLEDFNNSLLAKQAWRLHQNPFALWARVLE 1494
Score = 30.4 bits (67), Expect(2) = 8e-65
Identities = 11/19 (57%), Positives = 14/19 (73%)
Frame = +2
Query: 4139 VGNGTRINIWTSNWIPSLP 4195
+GNG +NI NWIPS+P
Sbjct: 1534 IGNGFSVNIVGDNWIPSIP 1552
Score = 88.6 bits (218), Expect(3) = 3e-28
Identities = 60/243 (24%), Positives = 111/243 (45%), Gaps = 3/243 (1%)
Frame = +1
Query: 2134 VPWILIGDLNFTMHDSET-RSSVNRPHHARHVRNFVQQLGLVDLGYSGSDTTWSNHRQGD 2310
+PW+++GD N + SE P + R+F+ L DL + G +W R G
Sbjct: 735 LPWLVLGDFNEVLDPSEKWGGGPPLPWRIKLFRDFLNNGHLRDLHFKGPGFSWFAMRHGR 794
Query: 2311 EHVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHT-ISTFKRQSPFKLYKCWF 2487
+ RLDRAL N W ++ + + HL I SDH P++L + + F+ + W
Sbjct: 795 VFIKERLDRALGNIAWSSSQPNTQILHLPKIGSDHRPLLLDSNPKMLNKTRLFRFEQMWT 854
Query: 2488 QIPSCNTTINQSWNHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY*IQTQLQL 2667
+ I +SW F GS + ++ L L+ W K F N + + + ++
Sbjct: 855 THEEYSDVIQRSWPPAFGGSAMRSWNRNLLSCGKALKMWSKEKFSNPSVQVADLLSDIEK 914
Query: 2668 CYDNNLPATHPRTQYLTNSLQTWLSI*KEYFMEQAGEKFLE-ADRNTSYFHSMAYFNKRI 2844
+ +N P H + LT+ + + + Y+ +++ +L+ D+N+S+FH ++
Sbjct: 915 LHQSNPPDAHHQINILTDQVTKLWTQDEMYWHQRSRVNWLKLGDQNSSFFHQTTIQRRQY 974
Query: 2845 SHI 2853
+ I
Sbjct: 975 NKI 977
Score = 48.1 bits (113), Expect(3) = 3e-28
Identities = 23/80 (28%), Positives = 42/80 (52%)
Frame = +2
Query: 2876 DIQDIFLAHYSSITNTYVPQHQPDILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPW 3055
D+ FL +++++ + PQ ++L ++ N+ L + E+K+ VF++
Sbjct: 993 DVALQFLDYFTALYQSNGPQQWEEVLDFVDTAVTAEMNKILSSPVSLLEVKKAVFDLGAT 1052
Query: 3056 ASPGNDGFQAAFYQNYWDTV 3115
+PG DGF FYQN W+ V
Sbjct: 1053 KAPGPDGFSGIFYQNQWEWV 1072
Score = 39.3 bits (90), Expect(3) = 3e-28
Identities = 18/89 (20%), Positives = 46/89 (51%)
Frame = +2
Query: 1805 RFCISQYDPDIFFISETKTQNNKMHFYLSHTKYPNYWYAPSIGFSGGIVFAWKNGIDLHI 1984
R C +++P+I F+ ET+ Q + + + K+ ++ I G+ W + + + I
Sbjct: 626 RIC-KKHNPEILFLMETRQQEGIIKEWKRNLKFTDHHVVDPIATGRGLALFWGDAVQVSI 684
Query: 1985 MHTTHNTIHSIINSHNHMPDMLLTYMYGD 2071
+ ++ N + ++++ + +T+MYG+
Sbjct: 685 LDSSPNYVDTVVSFLSDAFVCKITWMYGN 713
>ref|XP_006358721.1| PREDICTED: uncharacterized protein LOC102596481 [Solanum tuberosum]
Length = 1135
Score = 163 bits (413), Expect(3) = 5e-64
Identities = 99/338 (29%), Positives = 167/338 (49%), Gaps = 5/338 (1%)
Frame = +1
Query: 3136 QDNVIIAHELLHTMKTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDWIALIE 3315
+D + E++ + + H +V +KLDM+KA+D V W FL+ ++R+ GF I +I
Sbjct: 419 EDVTNMVKEIIRDINRRNKYHNVV-VKLDMAKAYDRVSWKFLVRVMRNFGFAERIIDMIV 477
Query: 3316 QCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMGMLQGL 3495
+ IS S+L+N F+ +RGL+QGDPLSP L + E SR L + G
Sbjct: 478 RLISNNWYSVLMNGQSFGFFQSTRGLKQGDPLSPTLFIIAAEVLSRGLNSLFEDPDYIGY 537
Query: 3496 KIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIFFGKHT 3675
+ K P ++HL +ADD +LF T M + ++L + + SGQ+INL KS I+ K
Sbjct: 538 GMPKWSPVVSHLSYADDTILFCSGQTTSMRKMINILRGYEKVSGQMINLDKSMIYLHKQV 597
Query: 3676 SPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSKLVNQA 3855
+ I + Q YL P+ R + + +L ++ R+ WQ+KL++
Sbjct: 598 PNRVCNLVKRITGIRQGSFPFTYLGCPIFYGRKNKGHFENLLKKVSNRMNTWQNKLMSFG 657
Query: 3856 GRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNS-----PRLITWEKVRLP 4020
R + +VL S+ +Y + P+S++ Q+ K+ ++W NS + W+K+ P
Sbjct: 658 ERYILIAHVLQSIPVYLLAAMNPPKSIIDQLHKLFAIFFWSNSSGARNKHWVAWDKMCYP 717
Query: 4021 KRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLL 4134
K + + AF AKL W + ++W +
Sbjct: 718 KVEGGLGFRSLHDVSKAFFAKLWWNFRTDTSSLWASFM 755
Score = 89.7 bits (221), Expect(3) = 5e-64
Identities = 72/269 (26%), Positives = 121/269 (44%), Gaps = 16/269 (5%)
Frame = +1
Query: 2107 LLDMNHAVDVPWILIGDLNFTMHDSETRSSVNRPHHARHVRNF---VQQLGLVDLGYSGS 2277
L D+ ++ PW++ GD N +DSE + P +F + L + + GS
Sbjct: 66 LEDIAGSMQKPWLVGGDFNTIRNDSEKLGGL--PVTQMETIDFNQCISSCALNEFSFKGS 123
Query: 2278 DTTWSNHRQGDEHVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFKRQ 2457
TW N R E +F RLD N +++ S + HL+ SDH+P LH + ++
Sbjct: 124 SYTWWNGRVETECIFERLDMVFGNEEFMSLLPNSEVQHLIRQGSDHAP--LHVVCNTSQE 181
Query: 2458 ---SPFKLYKCWFQIPSCNTTINQSWNH-HFLGSPLYQFSSKLKYIKTELQHWKKLHFGN 2625
PF+ W + + I+ W G+P SK+K +K EL W K FGN
Sbjct: 182 HVMKPFRFLNFWTKHENFKKLISDVWQEGEITGNPFTVVHSKMKRVKMELAKWSKKTFGN 241
Query: 2626 IEANLY*I-------QTQLQLC-YDNNLPATHPRTQYLTNSLQTWLSI*KEYFMEQAG-E 2778
+ + + + QL++ ++N H ++ + I +EY+ ++AG +
Sbjct: 242 VFQQIATLEDVIKTKEIQLEMAPTESNRAELHKAEA----DIKRYKHIEEEYWKQKAGMQ 297
Query: 2779 KFLEADRNTSYFHSMAYFNKRISHIHAIQ 2865
F + RNT +FH+ +R I+AIQ
Sbjct: 298 WFKDGYRNTKFFHAYVKGRRRKMQINAIQ 326
Score = 43.5 bits (101), Expect(3) = 5e-64
Identities = 25/79 (31%), Positives = 41/79 (51%), Gaps = 7/79 (8%)
Frame = +2
Query: 2918 NTYVPQHQPD-------ILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDG 3076
N Y Q D +L P I++ +N+ ++R+ +E+K+VVF ++ G D
Sbjct: 345 NVYKKQFMEDQEVSDYSMLTHIPPIITEEQNEIMVRIPTNEEVKKVVFAHNGDSASGPDD 404
Query: 3077 FQAAFYQNYWDTVGLEEDI 3133
F F+Q+ WD VG ED+
Sbjct: 405 FSGMFFQSCWDIVG--EDV 421
>emb|CAN68584.1| hypothetical protein VITISV_043904 [Vitis vinifera]
Length = 1283
Score = 158 bits (400), Expect(3) = 1e-63
Identities = 91/281 (32%), Positives = 149/281 (53%), Gaps = 3/281 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDWI 3303
GR I D +IA+E++ + ++ K + KLD+ KA++ + W FL+ +++ +GF S W+
Sbjct: 1007 GRXILDASLIANEVIDAWQKREEKGLIC--KLDIEKAYNNLNWQFLMKVMKKMGFGSKWL 1064
Query: 3304 ALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMGM 3483
+ CISTT S+L+N + F S+GLRQGDPLSPYL + ME S L+ V+ G
Sbjct: 1065 GWMWSCISTTKFSVLVNGVXAGFFXSSKGLRQGDPLSPYLFVMXMEVLSTLIRRAVEGGF 1124
Query: 3484 LQGLKI---GKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKST 3654
L G +I G+ I+HL F DD ++F + + L +L F ASG INL KS
Sbjct: 1125 LSGCRIRGGGRQPVHISHLLFVDDTIVFCEVRKEHLTHLSWILFWFEAASGLRINLDKSE 1184
Query: 3655 IFFGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQ 3834
I ++ + L + YL +PL + G+ + RL W+
Sbjct: 1185 IILVGEVEEMEEMAAE--LGCKVGSMPSMYLGLPLGAPNNAASMWDGVEEKVRRRLALWK 1242
Query: 3835 SKLVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI 3957
+ +++ GR + ++SM +YQM F++P+ V +++K+
Sbjct: 1243 RQYISKGGRLILIKSTMASMPLYQMSLFRMPKLVARRLEKL 1283
Score = 102 bits (254), Expect(3) = 1e-63
Identities = 69/255 (27%), Positives = 113/255 (44%), Gaps = 12/255 (4%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHARHVRNFVQQLGLVDLGYSGSDTTWSNHRQGDEH 2316
PW + GD N + E R + +LGLVDL G TWS
Sbjct: 621 PWCVGGDFNVILSQRERNXQGRITATMRRFAQVIDELGLVDLPLQGGGYTWSGGPNNQS- 679
Query: 2317 VFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTISTFKRQSPFKLYKCWFQIP 2496
+ RLDR LV W++ +++ L SDH P++L + + SPF+ W ++
Sbjct: 680 -WARLDRFLVTPCWLDQFSSVIQKRLSXPVSDHFPVLLEGGAIRRGLSPFRFENMWLKVE 738
Query: 2497 SCNTTINQSWNH-HFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY---------- 2643
I+ W GS Y ++K+K IK +L+ W + FG +E N
Sbjct: 739 GFKDLIHSWWQGIEVRGSASYGLATKMKEIKQKLKVWNREVFGRLEDNKAAALQLVDHWD 798
Query: 2644 *IQTQLQLCYDNNLPATHPRTQYLTNSLQTWLSI*KEYFMEQAGEKFL-EADRNTSYFHS 2820
++++ L + + + Y W S+ + ++ + + E +L E DRNT YFH
Sbjct: 799 LVESERXLSEEETISKKEAKESY-----AKWASLEETHWRQHSRELWLREGDRNTCYFHR 853
Query: 2821 MAYFNKRISHIHAIQ 2865
MA ++RI+H+ I+
Sbjct: 854 MAAXHRRINHMDRIK 868
Score = 34.3 bits (77), Expect(3) = 1e-63
Identities = 22/66 (33%), Positives = 31/66 (46%), Gaps = 1/66 (1%)
Frame = +2
Query: 2945 DILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDGFQAAFYQNYWDTVGLE 3124
DI +L IS E +L DEI + + +P +GF F+Q+YW V E
Sbjct: 901 DIERLXLEQISQQEADNLXLPFSEDEIHSALLEMNGDKAPRPNGFTMTFWQSYWALVKEE 960
Query: 3125 E-DIFK 3139
D+FK
Sbjct: 961 VLDLFK 966
>emb|CAN61231.1| hypothetical protein VITISV_041719 [Vitis vinifera]
Length = 996
Score = 169 bits (427), Expect(4) = 3e-63
Identities = 103/345 (29%), Positives = 170/345 (49%), Gaps = 8/345 (2%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDWI 3303
GR I D +IA+E + + K+ + L+ KLD+ KA+D + W FL+ ++R +GF S W+
Sbjct: 397 GRQILDASLIANEAIDAWQ-KRGERGLI-CKLDIEKAYDSLNWQFLMKVMRKMGFGSRWL 454
Query: 3304 ALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMGM 3483
+ +CIST S+L+N + F S+GLRQGDPLSPYL + ME S L+ V+ G
Sbjct: 455 GWMWRCISTAKFSVLVNGVSAGFFPSSKGLRQGDPLSPYLFVMGMEVLSTLIRRAVEGGF 514
Query: 3484 LQGLKI---GKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKST 3654
L G +I G+ ++HL FADD ++F + + L ++ F ASG INL+KS
Sbjct: 515 LSGCRIQGGGRQPVHVSHLLFADDTIVFCEARKEYLAYLSWIMFWFEAASGLRINLEKSK 574
Query: 3655 IFFGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQ 3834
+ ++ + L + YL +PL G+ M RL W+
Sbjct: 575 LIPVGEVEEMEELAAE--LGCKVGSMPSVYLGLPLGARNKSAAVWDGVEEKMRRRLAQWK 632
Query: 3835 SKLVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSPRLIT 3999
+ +++ GR + ++S+ +YQM F++P+ V +++K+ R + W +
Sbjct: 633 RQYISKGGRLILIKSTMASIPLYQMSLFRMPKLVARRLEKLQRDFLWGGGNLERKVHNVN 692
Query: 4000 WEKVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLL 4134
W+ V K N A L K W+ ++ +W +L
Sbjct: 693 WKIVCTEKEKGGLGLRKLVPLNKALLGKWIWRFACEKEXLWRHVL 737
Score = 89.7 bits (221), Expect(4) = 3e-63
Identities = 62/218 (28%), Positives = 101/218 (46%), Gaps = 10/218 (4%)
Frame = +1
Query: 2242 QLGLVDLGYSGSDTTWSNHRQGDEHVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSP 2421
+LGL+DL G D TWS + + RLDR LV W++ +++ L ASDH P
Sbjct: 60 KLGLIDLPLQGGDYTWSGGP--NNRYWARLDRFLVTPSWMDQFSSVIQKRLPRPASDHFP 117
Query: 2422 IILHTISTFKRQSPFKLYKCWFQIPSCNTTINQSWNH-HFLGSPLYQFSSKLKYIKTELQ 2598
++L + + SPF+ W ++ I+ W GS ++ +KLK +K +L+
Sbjct: 118 VVLEGGTMRRGPSPFRFENMWLKVEGFQELIHSWWQGIEVRGSASFRLVTKLKVVKQKLK 177
Query: 2599 HWKKLHFGNIEANLY*IQTQLQL--------CYDNNLPATHPRTQYLTNSLQTWLSI*KE 2754
W + FG +E N LQL C + +S W+S+ +
Sbjct: 178 EWNREVFGRLEDNK---AAALQLVDHWDRVECERRLSEEETVSKKEAKDSYAKWVSLEET 234
Query: 2755 YFMEQAGEKFL-EADRNTSYFHSMAYFNKRISHIHAIQ 2865
++ + + E +L E D NT YFH M ++R +H I+
Sbjct: 235 HWRQHSRELWLREGDNNTGYFHRMVAAHRRSNHXDRIK 272
Score = 30.0 bits (66), Expect(4) = 3e-63
Identities = 18/66 (27%), Positives = 33/66 (50%)
Frame = +2
Query: 2945 DILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDGFQAAFYQNYWDTVGLE 3124
DI L ++ E ++L + +EI + +PG DGF AF+Q W V ++
Sbjct: 305 DIEGLQLEQLNQQEAENLEQPFSEEEIHSAPMEMNGDKAPGPDGFSMAFWQRCW--VIVK 362
Query: 3125 EDIFKI 3142
E++ ++
Sbjct: 363 EEVLEM 368
Score = 26.2 bits (56), Expect(4) = 3e-63
Identities = 11/22 (50%), Positives = 13/22 (59%), Gaps = 1/22 (4%)
Frame = +2
Query: 4118 CGEN-C*KVGNGTRINIWTSNW 4180
C EN ++GNGTRI W W
Sbjct: 772 CWENMAFRMGNGTRIRFWNDLW 793
>ref|XP_002454941.1| hypothetical protein SORBIDRAFT_03g001780 [Sorghum bicolor]
gi|241926916|gb|EES00061.1| hypothetical protein
SORBIDRAFT_03g001780 [Sorghum bicolor]
Length = 631
Score = 243 bits (619), Expect(2) = 3e-62
Identities = 127/351 (36%), Positives = 206/351 (58%), Gaps = 6/351 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKT-KKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DNV++A+E++H +K+ KK L +KLDMSKA+D V W FL +++R +GF W
Sbjct: 124 GRLITDNVLLAYEIVHHLKSIKKGAGGLAAIKLDMSKAYDRVEWSFLENMMRKMGFDEKW 183
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ LI +C++T + +N++ + P RGLRQGDPLSPYL + E S +L+ G
Sbjct: 184 VQLIMKCVTTVTYKIKVNDSYTQKIFPQRGLRQGDPLSPYLFIICAEGLSAMLQKAEQKG 243
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
++G+KI + P +NHLFFADD L+ + A+ L+ +L ++ +ASGQVIN +KS++
Sbjct: 244 KIEGIKICRGAPKVNHLFFADDSLILMRARASDALELRRILDVYEKASGQVINKEKSSMM 303
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F +T ++ + L+++ EKYL +P+ + +SR+K I + R+QGWQ K
Sbjct: 304 FSPNTGQHDRSLMRSNLSITDEASTEKYLGLPVNIGKSRKKPFEYIKKKIWSRIQGWQEK 363
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWH-----NSPRLITWE 4005
L+++AG+ + V S+ Y M F L + + ++ I +YWW N I+WE
Sbjct: 364 LLSKAGKEILIKAVAQSIPTYAMSCFDLTKGLCDELSSIIGRYWWSQQDKANKIHWISWE 423
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLKGGQWYSH 4158
K+ K +N A L++ AW+LL N D++ G++LK +++ H
Sbjct: 424 KLTQSKEKGGLGFRDLHLFNLAMLSRQAWRLLTNPDSLCGQVLK-ARYFPH 473
Score = 26.9 bits (58), Expect(2) = 3e-62
Identities = 8/17 (47%), Positives = 11/17 (64%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIP 4186
++GNG + IW WIP
Sbjct: 506 RIGNGKNVKIWEHPWIP 522
>gb|EEC79647.1| hypothetical protein OsI_20882 [Oryza sativa Indica Group]
Length = 1784
Score = 221 bits (564), Expect(3) = 9e-60
Identities = 126/344 (36%), Positives = 186/344 (54%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTM-KTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN I+A E H++ K +K + A KLD+SKA+D V W FL L LGF W
Sbjct: 1246 GRMITDNAILAFECFHSIQKNRKPESAACAYKLDLSKAYDRVDWGFLEQSLYKLGFAHRW 1305
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ I CI+T S+ N T + F PSRGLRQGDPLSP+L LFI + S LLE V G
Sbjct: 1306 VRWIMVCITTVRYSVKFNGTLLSTFAPSRGLRQGDPLSPFLFLFIADGLSLLLEDKVAQG 1365
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L +KI + P I+HL FADD LLFF+ + Q +K+++ ++ A+GQ+IN K +I
Sbjct: 1366 ALSPVKICRQAPGISHLLFADDTLLFFKADNVQAQAVKEVISDYASATGQLINPAKCSIM 1425
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
FG+ + P + +I L ++ ++YL P R + + + RL W
Sbjct: 1426 FGESSPPQTRDAIRVTLQIANSSFEDRYLGFPTPEGRMCKGKFQSLQERIWKRLIIWGEN 1485
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSPRLITWE 4005
L++ G+ + V+ ++ +Y M FKLPESV ++ K+ R +WW +WE
Sbjct: 1486 LLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNFWWGVEKGKRKTHWKSWE 1545
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
+ PK +N A LA+ AW+L+ N D++ ++LK
Sbjct: 1546 CLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLK 1589
Score = 34.7 bits (78), Expect(3) = 9e-60
Identities = 19/75 (25%), Positives = 34/75 (45%), Gaps = 4/75 (5%)
Frame = +3
Query: 4224 IFLIINGSLSC-LTLKLLDQEDTLVWPYTASGVFTTSSCYKLLCQQDNISSTTLNLS--- 4391
+FL ++ C + + ++D + W G F+ S Y L C N+ +++ + S
Sbjct: 1681 VFLPVDAETICSIRVSSRQEDDFVAWHPDKHGKFSVRSAYGLACNLVNMETSSSSSSAGC 1740
Query: 4392 PRFWLKFWKLNMPYK 4436
R W W+ N P K
Sbjct: 1741 KRMWNLIWQTNAPQK 1755
Score = 26.2 bits (56), Expect(3) = 9e-60
Identities = 7/17 (41%), Positives = 11/17 (64%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIP 4186
++GNG + IW W+P
Sbjct: 1628 RIGNGKSVRIWRDPWLP 1644
Score = 224 bits (570), Expect = 4e-55
Identities = 127/344 (36%), Positives = 187/344 (54%), Gaps = 6/344 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTM-KTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN I+A E H++ K +K + A KLD+SKA+D V W FL L LGF W
Sbjct: 548 GRMITDNAILAFECFHSIQKNRKPESAACAYKLDLSKAYDRVDWGFLEQSLYKLGFAHRW 607
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ I CI+T S+ N T + F PSRGLRQGDPLSP+L LFI + S LLE V G
Sbjct: 608 VRWIMVCITTVRYSVKFNGTLLSTFAPSRGLRQGDPLSPFLFLFIADGLSLLLEDKVAQG 667
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L +KI + P I+HL FADD LLFF+ + Q +K+++ ++ A+GQ+IN K +I
Sbjct: 668 ALSPVKICRQAPGISHLLFADDTLLFFKADNVQAQAVKEVISDYASATGQLINPAKCSIM 727
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
FG+ + P + +I L ++ G ++YL P R + + + RL W
Sbjct: 728 FGESSPPQTRDAIRVTLQIANSGFEDRYLGFPTPEGRMCKGKFQSLQERIWKRLIIWGEN 787
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSPRLITWE 4005
L++ G+ + V+ ++ +Y M FKLPESV ++ K+ R +WW +WE
Sbjct: 788 LLSSGGKEVLIKSVIQAIPVYVMGIFKLPESVCEELTKLTRNFWWGVEKGKRKTHWKSWE 847
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
+ PK +N A LA+ AW+L+ N D++ ++LK
Sbjct: 848 CLTRPKSNGGLGFRDFRLFNQALLARQAWRLIVNPDSLCARVLK 891
Score = 79.7 bits (195), Expect(3) = 1e-23
Identities = 63/256 (24%), Positives = 122/256 (47%), Gaps = 5/256 (1%)
Frame = +1
Query: 2101 TILLDMNHAVDVPWILIGDLNFTMHDSETRSSVNRPH-HARHVRNFVQQLGLVDLGYSGS 2277
++L + + ++PW+++GD N T+ E S R + R+ +Q L DLG+ G
Sbjct: 120 SMLNSIKQSSNLPWLVLGDFNETLWQFEHFSKKKRSEVQMQAFRDVLQTYELHDLGFKGL 179
Query: 2278 DTTWSNHRQGDEHVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIIL-HTISTFK- 2451
T+ N R+G +V VRLDR + ++ W + + +S + HL+ S+H P++L + T +
Sbjct: 180 PYTYDNKREGINNVRVRLDRVVADDGWRDMFRSSQVEHLISPCSNHCPVVLKFCVDTNQP 239
Query: 2452 -RQSPFKLYKCWFQIPSCNTTINQSWNHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNI 2628
R+ W + I++SW S L S L + +L W + N+
Sbjct: 240 ARRKCLHYEIFWEREAELVEVIDESWAALGDKSDLADISRALSQVMAKLHSWSRRKCKNV 299
Query: 2629 EANLY*IQTQLQLCYDNNLPATHPRTQYLTNSLQTWLSI*KEYFMEQAGEKFL-EADRNT 2805
+ + +L ++ + R+ +++L L + +++++ +L E DRNT
Sbjct: 300 GREIEKGRKRLAELIESGADSRSIRS--ASDNLHELLYREEMLWLQRSRVNWLKEGDRNT 357
Query: 2806 SYFHSMAYFNKRISHI 2853
+FHS A + + + I
Sbjct: 358 RFFHSKAVWRAKKNRI 373
Score = 44.3 bits (103), Expect(3) = 1e-23
Identities = 21/76 (27%), Positives = 37/76 (48%)
Frame = +2
Query: 2879 IQDIFLAHYSSITNTYVPQHQPDILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWA 3058
++D+ ++ + + Q + +L +S + N+ L +EI +F I P
Sbjct: 390 LEDMATEYFKEVFSADPLLDQSKVTRLIQRKVSPAMNETLCSEFKEEEISNAMFQIGPLK 449
Query: 3059 SPGNDGFQAAFYQNYW 3106
+PG DGF A FYQ +W
Sbjct: 450 APGPDGFPARFYQRHW 465
Score = 36.6 bits (83), Expect(3) = 1e-23
Identities = 23/109 (21%), Positives = 40/109 (36%)
Frame = +2
Query: 1745 MKVFSWNCQGFNNPHTRDYFRFCISQYDPDIFFISETKTQNNKMHFYLSHTKYPNYWYAP 1924
M WNC+G N T + + F+ ET+ +M S +
Sbjct: 1 MSCLIWNCRGIGNAATVRDLCALSREAGSQLVFLCETRQSVERMRRLRSRLGLRGFVGEN 60
Query: 1925 SIGFSGGIVFAWKNGIDLHIMHTTHNTIHSIINSHNHMPDMLLTYMYGD 2071
G SGG+ W + + I I + + + P +T++YG+
Sbjct: 61 CNGMSGGLALFWDESVFVEIKGINERYIDAYVRLSVNDPIWHVTFVYGE 109
>gb|AFP55557.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
Length = 1747
Score = 198 bits (503), Expect(3) = 9e-60
Identities = 108/342 (31%), Positives = 178/342 (52%), Gaps = 5/342 (1%)
Frame = +1
Query: 3127 RHIQDNVIIAHELLHTMKTK-KIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDWI 3303
R I DN+I A E++H +K + K + +KLDM+KA+D V W FL ++ +GF ++
Sbjct: 832 RIIHDNIIAAFEIIHCLKRRGKDSRQKIALKLDMTKAYDRVEWGFLQRMMEVMGFPDRFV 891
Query: 3304 ALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMGM 3483
LI C+ + S+L+ P KPSRGLRQGDP+SPYL L + E S L+
Sbjct: 892 FLIMDCVKSVTYSVLLQGAPFGKIKPSRGLRQGDPISPYLFLIVAEGLSALIRKAEREQQ 951
Query: 3484 LQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIFF 3663
+ G+ I + P+++HLF+ADD LLF T LK++ + ASGQ IN KS I F
Sbjct: 952 IHGVAIARGAPSVSHLFYADDSLLFCDATVTDCMALKNIFSTYEAASGQKINKDKSAICF 1011
Query: 3664 GKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSKL 3843
+ + K + + IL++ + E+YL +P + + ++K + + + R+ GW+ KL
Sbjct: 1012 SPKSPAAIKEACSAILDMPVVPCHERYLGLPTVSGKDKKKLFQSLPDRVWNRVHGWEGKL 1071
Query: 3844 VNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSP----RLITWEKV 4011
+++AG+ + V ++ Y M F+LP ++K ++WW W +
Sbjct: 1072 LSKAGKEVLIKTVAQAIPNYTMSVFQLPAGTSDAINKCVARFWWGKEGGKGIHWRRWSDL 1131
Query: 4012 RLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLK 4137
K+ +N A L K W+L+ D++ ++LK
Sbjct: 1132 CFSKKDGGLGFRDLSLFNQALLGKQGWRLMMYPDSLVARMLK 1173
Score = 57.8 bits (138), Expect(3) = 9e-60
Identities = 54/264 (20%), Positives = 98/264 (37%), Gaps = 8/264 (3%)
Frame = +3
Query: 4245 SLSCLTLKLLDQEDTLVWPYTASGVFTTSSCYKLLCQQDNISSTTLNLSPR-FWLKFWKL 4421
++S +T+ + D +W Y +G +T S Y L C+++ + + L+PR FW WKL
Sbjct: 1273 AISSITVGATRRPDVYMWNYCKNGRYTVKSGYWLACEENREEAINIVLAPRNFWKHLWKL 1332
Query: 4422 NMPYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIW 4601
+P K FLW+ +P L C C + H C A++
Sbjct: 1333 KLPPKINHFLWRCSMGFIPCMEVLLWKHIAHSASCFRCQQGRESPV-HATWGCSCCVAVF 1391
Query: 4602 RYFFPQQHTSMMQFASLLSWVQTWQSHDSQINIHSTPRVIRIIVFIMHFIRKHRCKVIFS 4781
S QF S + + H + + + ++ +++ ++ C +
Sbjct: 1392 ERAGFYSKLSSGQFPSFIHLL-----HHAFSTLDKEELQLFAVLLWLNWHERNNC---YH 1443
Query: 4782 NLSPNHTSVIHQVSFYIAKHQLHAASSIPAFFKYVVNDV-------WNPPPLNVLKINID 4940
+ + +I++ K A V +V W P LK+N D
Sbjct: 1444 KGAVVPSDIIYENGVKFLKCFKEALGCRAGVEVKAVEEVVPGSLRRWQAPSSGQLKVNCD 1503
Query: 4941 ASYKPLSLLAGIGIIIRNDAGQYV 5012
+ G G IIR++ G +
Sbjct: 1504 GAANFKDRCFGGGTIIRDEFGSLI 1527
Score = 26.6 bits (57), Expect(3) = 9e-60
Identities = 7/21 (33%), Positives = 14/21 (66%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWIPSLPS 4198
++G+G + ++ W+P LPS
Sbjct: 1212 RIGDGKEVRVFIDPWVPGLPS 1232
Score = 78.6 bits (192), Expect(2) = 8e-18
Identities = 65/274 (23%), Positives = 111/274 (40%), Gaps = 16/274 (5%)
Frame = +1
Query: 2095 SMTILLDMNHAVDVPWILIGDLNFTMHDSETRSSVNRPHHARH-VRNFVQQLGLVDLGYS 2271
S +L + PW+ GD N + +E +V R R+ V+ GL + ++
Sbjct: 400 SWDLLRSLRRVCSEPWLCCGDFNEILDFNEKTGAVQRSQRQIDGFRHAVEDCGLYEFAFT 459
Query: 2272 GSDTTWSNHRQGDEHVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTI---- 2439
G TW N R+GD +V RLDR N I + HLV ++SDH P++
Sbjct: 460 GFQYTWDNRRKGDANVKERLDRGFGNLALIQQWGGISCHHLVSMSSDHCPLLFENDPPMS 519
Query: 2440 --STFKRQSPFKLYKCWFQIPSCNTTINQSWNHHFLGSPLYQFSS---KLKYIKTELQHW 2604
++R+ F W C + + W L+ +S KL+ + L+ W
Sbjct: 520 RGGNWRRKRRFLFEDMWLTHEGCRGVVERQW--------LFGVNSVVGKLEQVAGGLKRW 571
Query: 2605 KKLHFGNIEANLY*IQTQLQLCY----DNNLPATHPRTQYLTNSLQTWLSI*KEYFMEQA 2772
+ FG+++ + ++ +L + +N+ + L + + +E +Q
Sbjct: 572 NQETFGSVKKKVASLREELDVLQRQPPTSNIICKRNEVECLLDGVLER----EELLWKQR 627
Query: 2773 GEK--FLEADRNTSYFHSMAYFNKRISHIHAIQG 2868
F DRNT +FH A R + I I G
Sbjct: 628 ARVSWFKCGDRNTQFFHQTAKQRGRSNRICGILG 661
Score = 42.4 bits (98), Expect(2) = 8e-18
Identities = 20/84 (23%), Positives = 43/84 (51%)
Frame = +2
Query: 2867 D*KDIQDIFLAHYSSITNTYVPQHQPDILQLFTPCISDSENQDLIRLLDADEIKEVVFNI 3046
D DI +F++++ ++ I + T + + + L ++ +EI+ + ++
Sbjct: 669 DVTDIGCVFVSYFRNLFTAGGGSMDETIFEAVTSRVDATSKKSLDQVYRREEIELALKDM 728
Query: 3047 RPWASPGNDGFQAAFYQNYWDTVG 3118
P SPG+DG A F+Q +W+ +G
Sbjct: 729 NPSKSPGSDGMPARFFQKFWNIIG 752
>emb|CCA66050.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
Length = 1357
Score = 233 bits (594), Expect(2) = 1e-59
Identities = 124/351 (35%), Positives = 201/351 (57%), Gaps = 6/351 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKK-IKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN +IA E+ HTMK + + L+ MKLDMSKA+D V W FL +L +GF W
Sbjct: 550 GRLISDNSLIALEIFHTMKKRNNSRKGLMAMKLDMSKAYDRVEWGFLRKLLLTMGFDGRW 609
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
+ L+ C++T S +IN PSRGLRQGDPLSP+L + + +AFS++++ V
Sbjct: 610 VNLVMSCVATVSYSFIINGRVCGSVTPSRGLRQGDPLSPFLFILVADAFSQMVKQKVVSK 669
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
+ G K ++ P I+HL FADD LLF + + + D+L+ + ASGQ IN +KS +
Sbjct: 670 EIHGAKASRNGPEISHLLFADDSLLFTRATRQECLTIVDILNKYEAASGQKINYEKSEVS 729
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F + S +K + +L++ Q+ +KYL IP L RS++ +L+ M +L+GW+ K
Sbjct: 730 FSRGVSCEKKEELITLLHMRQVDRHQKYLGIPALCGRSKKVLFRELLDRMWKKLRGWKEK 789
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSPRLITWE 4005
L+++AG+ + V+ ++ Y M +KLP +V+ ++ ++WW ++WE
Sbjct: 790 LLSRAGKEVLIKAVIQALPTYLMGVYKLPVAVIQEIHSAMARFWWGGKGDERKMHWLSWE 849
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLKGGQWYSH 4158
K+ PK +N A L K W+LLHN++++ +++ ++Y H
Sbjct: 850 KMCKPKCMGGMGFKDLAVFNDALLGKQVWRLLHNKESLLSRVM-SAKYYPH 899
Score = 27.7 bits (60), Expect(2) = 1e-59
Identities = 8/16 (50%), Positives = 15/16 (93%)
Frame = +2
Query: 4136 KVGNGTRINIWTSNWI 4183
+VG+GT+I+IW++ W+
Sbjct: 932 RVGDGTKIDIWSAPWV 947
Score = 80.1 bits (196), Expect(2) = 4e-18
Identities = 63/249 (25%), Positives = 102/249 (40%), Gaps = 7/249 (2%)
Frame = +1
Query: 2137 PWILIGDLNFTMHDSETRSSVNRPHHAR-HVRNFVQQLGLVDLGYSGSDTTWSNHRQGDE 2313
P + GD N + E +R A RN + L DL + G TW R +
Sbjct: 132 PIVFGGDFNEILSYDEKEGGASRERRAIVGFRNVMDDCSLGDLRFVGQWHTWERGRSPES 191
Query: 2314 HVFVRLDRALVNNLWINNYTASYL*HLVPIASDHSPIILHTIST----FKRQSPFKLYKC 2481
+ RLDR +V+ W++ + +++ H V SDH+ I+L + +R F
Sbjct: 192 RIRERLDRFIVSRSWLHLFPEAFIDHQVRYCSDHAAIVLRCLGNEGMPRRRAGGFWFETF 251
Query: 2482 WFQIPSCNTTINQSWNHHFLGSPLYQFSSKLKYIKTELQHWKKLHFGNIEANLY*IQTQL 2661
W +C + +WN G + KL + ELQ W K FG++ + ++ +L
Sbjct: 252 WLLDDTCEEVVRGAWNAAEGG----RICEKLGAVARELQGWSKKTFGSLRKKIEAVEKKL 307
Query: 2662 QLCYDNNLPA-THPRTQYLTNSLQTWLSI*KEY-FMEQAGEKFLEADRNTSYFHSMAYFN 2835
+ R L L + + Y ++ + + DRNTSYFH A
Sbjct: 308 HAAQGEATSIDSWERCVGLERELDELHAKNEAYWYLRSRVAEVKDGDRNTSYFHHKASQR 367
Query: 2836 KRISHIHAI 2862
K+ + IH I
Sbjct: 368 KKRNLIHGI 376
Score = 42.0 bits (97), Expect(2) = 4e-18
Identities = 20/74 (27%), Positives = 38/74 (51%)
Frame = +2
Query: 2945 DILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDGFQAAFYQNYWDTVGLE 3124
++LQ ++ N L++ +EI + ++ P +PG DG A FYQ +W +G
Sbjct: 414 EVLQHVKRSVTQEYNDILLKPYSKEEIFAALSDMHPCKAPGPDGMHAIFYQRFWHIIG-- 471
Query: 3125 EDIFKIM*LLHTNY 3166
+++F + + NY
Sbjct: 472 DEVFNFVSSILHNY 485
Score = 68.2 bits (165), Expect = 4e-08
Identities = 60/289 (20%), Positives = 114/289 (39%), Gaps = 3/289 (1%)
Frame = +3
Query: 4281 EDTLVWPYTASGVFTTSSCYKLLCQQDNISSTTLNLSPRFWLKFWKLNMPYKYQIFLWKG 4460
+D L W Y+ G ++ + Y L L+ R W W LN+ K + FLW+
Sbjct: 1005 QDELTWAYSKDGTYSVKTAYMLG------KGGNLDDFHRVWNILWSLNVSPKVRHFLWRA 1058
Query: 4461 LHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAIWRYFFPQQHTSMMQ 4640
++LPV+ ++ + +D+ C + E HL CP S +W ++
Sbjct: 1059 CTSSLPVR-KVLQRRHLIDEAGCPCCAREDETQFHLFYRCPMSLKLWEELGSYILLPGIE 1117
Query: 4641 FASLLSWVQTWQSHDSQINIHSTPRVIRIIVFIMHFIRKHRCKVIFSNLSPNHTSVIHQV 4820
++ + W D+ +V++ +I+ + R + +F + S T V ++
Sbjct: 1118 DEAMCDTLVRWSQMDA--------KVVQKGCYILWNVWVERNRRVFEHTSQPATVVGQRI 1169
Query: 4821 SFYIAKHQLHAASSIPAFFKYVV--NDVWNPPPLNVLKINIDASYKPLSLLAGIGIIIRN 4994
+ +A W PP+ +K+N DAS + G+G+I R+
Sbjct: 1170 MRQVEDFNNYAVKIYGGMRSSAALSPSRWYAPPVGAIKLNTDASLAEEGWV-GLGVIARD 1228
Query: 4995 DAGQY-VSGKSTVRRVIDIHQXXXXXXXXXXXXXTSNGWSNVVFETDNL 5138
G+ + VR ++G+ +V+FE+D+L
Sbjct: 1229 SEGKVCFAATRRVRAYWPPEVAECKAIYMATRLAQAHGYGDVIFESDSL 1277
>gb|AAD29058.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
thaliana]
Length = 1229
Score = 238 bits (608), Expect = 2e-59
Identities = 126/360 (35%), Positives = 197/360 (54%), Gaps = 6/360 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKIK-HALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DNV+I HE+LH ++T K H + +K DMSKA+D V W FL +L+ GFHS W
Sbjct: 438 GRVISDNVLITHEVLHFLRTSSAKKHCSMAVKTDMSKAYDRVEWDFLKKVLQRFGFHSIW 497
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
I + +C+++ S LIN TP P+RGLRQGDPLSP L + E S L +
Sbjct: 498 IDWVLECVTSVSYSFLINGTPQGKVVPTRGLRQGDPLSPCLFILCTEVLSGLCTRAQRLR 557
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L G+++ + P +NHL FADD + F + + N L ++L + +ASGQ IN KS++
Sbjct: 558 QLPGVRVSINGPRVNHLLFADDTMFFSKSDPESCNKLSEILSRYGKASGQSINFHKSSVT 617
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F T S K + IL + + G KYL +P R ++ I++ + + W S+
Sbjct: 618 FSSKTPRSVKGQVKRILKIRKEGGTGKYLGLPEHFGRRKRDIFGAIIDKIRQKSHSWASR 677
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSPRL-----ITWE 4005
++QAG+ + VL+SM +Y M FKLP ++ ++ + ++WW P + + W
Sbjct: 678 FLSQAGKQVMLKAVLASMPLYSMSCFKLPSALCRKIQSLLTRFWWDTKPDVRKTSWVAWS 737
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLKGGQWYSH*YLDFKLDS 4185
K+ PK N + LAKL W+LL++ +++ ++L G +S +++ KL S
Sbjct: 738 KLTNPKNAGGLGFRDIERCNDSLLAKLGWRLLNSPESLLSRILLGKYCHSSSFMECKLPS 797
Score = 66.2 bits (160), Expect(2) = 2e-16
Identities = 58/233 (24%), Positives = 112/233 (48%), Gaps = 6/233 (2%)
Frame = +1
Query: 2227 RNFVQQLGLVDLGYSGSDTTWSNHRQGDEHVFVRLDRALVNNLWINNYTASYL*HLVPIA 2406
R+F+ + GL DL YSG+ +W R D V RLDRA+ NN W+ ++ + +L
Sbjct: 59 RSFISKNGLWDLKYSGNPFSWRGMRY-DWFVRQRLDRAMSNNSWLESFPSGRSEYLRFEG 117
Query: 2407 SDHSPIILHT-ISTFKRQSPFKLYKCWFQIPSCNTTINQSWNHHFLGSPLYQFSSKLKYI 2583
SDH P+++ + KR+ F+ N I ++W + S L +K+
Sbjct: 118 SDHRPLVVFVDEARVKRRGQFRFDNRLRDNDVVNALIQETWTNAGDASVL----TKMNQC 173
Query: 2584 KTELQHWKKLHFGNIEANLY*IQTQLQLCYDNNLPATHPRT-QYLTNSLQTWLSI*KEYF 2760
+ E+ +W +L N + Q L+ + P +P T LT +L+ + ++++
Sbjct: 174 RREIINWTRLQNLNSAELIEKTQKALEEALTADPP--NPTTIGALTATLEHAYKLEEQFW 231
Query: 2761 MEQAGEKFLEA-DRNTSYFHSMAYFNK---RISHIHAIQGLKRYSRYFFGSLL 2907
+++ +L + DRNT YFH++ + R++ + I G+ ++ + ++
Sbjct: 232 KQRSRVLWLHSGDRNTGYFHAVTRNRRTQNRLTVMEDINGVAQHEEHQISQII 284
Score = 50.1 bits (118), Expect(2) = 2e-16
Identities = 20/53 (37%), Positives = 32/53 (60%)
Frame = +2
Query: 2966 PCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDGFQAAFYQNYWDTVGLE 3124
P +S +N L R+ + +E+K+ VF+I +PG DGF A FY +YW + +
Sbjct: 309 PMVSQGDNDFLTRIPNDEEVKDAVFSINASKAPGPDGFTAGFYHSYWHIISTD 361
>gb|AAT58873.1| hypothetical protein [Oryza sativa Japonica Group]
Length = 1264
Score = 236 bits (603), Expect = 6e-59
Identities = 125/341 (36%), Positives = 197/341 (57%), Gaps = 6/341 (1%)
Frame = +1
Query: 3127 RHIQDNVIIAHELLHTM-KTKKIKHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDWI 3303
R I NV++A+EL H + + KK K+ + +KLDMSKA+D V W FL ++ LGFH W+
Sbjct: 892 RLITYNVLLAYELTHYLNQRKKGKNGVAAIKLDMSKAYDRVEWDFLRHMMLRLGFHDQWV 951
Query: 3304 ALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMGM 3483
L+ +C+++ + IN S P RGLRQGDPLSPYL + E S LL+ G
Sbjct: 952 NLVMKCVTSVTYRIKINGEHSDQIYPQRGLRQGDPLSPYLFIICAEGLSALLQKAQADGK 1011
Query: 3484 LQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIFF 3663
++G+K+ + P INHLFFADD L+ + L+ +L+I+ ASGQVIN KS++ F
Sbjct: 1012 IEGIKVCRDTPRINHLFFADDSLVLMRAGQNDAQELRRVLNIYEVASGQVINKDKSSVLF 1071
Query: 3664 GKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSKL 3843
+T S + + L ++Q E+YL +P+ + +SR+K I + +R+QGWQ KL
Sbjct: 1072 SPNTLQSDRMEVRSALCINQEAKNERYLGLPVSIGKSRRKAFEYIKRKVWLRIQGWQEKL 1131
Query: 3844 VNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWW-----HNSPRLITWEK 4008
+++AG+ V V ++ Y M F L + + +++ + ++WW N ++WEK
Sbjct: 1132 LSKAGKEILVKAVAQAIPTYAMSCFDLTKGLCDEINSMISKWWWSQNDKENKIHWLSWEK 1191
Query: 4009 VRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKL 4131
+ LPK+ +N A LA+ AW+LL N D++ G++
Sbjct: 1192 MTLPKKLGGPGFRDLHLFNMAMLARQAWRLLLNVDSLCGQV 1232
Score = 72.8 bits (177), Expect(2) = 2e-10
Identities = 54/222 (24%), Positives = 100/222 (45%), Gaps = 9/222 (4%)
Frame = +1
Query: 2227 RNFVQQLGLVDLGYSGSDTTWSNHRQ-GDEHVFVRLDRALVNNLWINNYTASYL*HLVPI 2403
R ++ L DLG+ G TW NH ++ RLDRA+ N W + + + P
Sbjct: 501 RQALEDCQLHDLGFVGDAFTWRNHHHLASNYIKERLDRAVANGAWRARFPLVRVINGDPR 560
Query: 2404 ASDHSPIILHTISTFKRQ--SPFKLYKC----WFQIPSCNTTINQSWNHHFLGSPLYQFS 2565
SDH +I+ T +T K+Q P ++ + W + C + ++W + G
Sbjct: 561 HSDHRSVIVETGATEKQQWGQPLEIMQKFEARWLEEEECQARVEEAWENALEGGQTRLME 620
Query: 2566 SKLKYIKTELQHWKKLHFGNIEANLY*IQTQLQLCYDNNLPATHPRTQYLTN-SLQTWLS 2742
+ + +K EL W + G ++ + ++ +L+ C + ++L L+ L
Sbjct: 621 IQSRVLK-ELWAWDRTVLGELKKRVKNLRKELEKCRREPISNRQVNREHLLRYKLERLLD 679
Query: 2743 I*KEYFMEQAGEKFL-EADRNTSYFHSMAYFNKRISHIHAIQ 2865
Y+ ++A +L + DRNT +FH+ A K+ + I +Q
Sbjct: 680 QQHIYWKQRAHSTWLTKGDRNTKFFHAQASEKKKRNTIQKLQ 721
Score = 23.5 bits (49), Expect(2) = 2e-10
Identities = 12/57 (21%), Positives = 24/57 (42%)
Frame = +2
Query: 2948 ILQLFTPCISDSENQDLIRLLDADEIKEVVFNIRPWASPGNDGFQAAFYQNYWDTVG 3118
+LQ ++ + L +E+ + ++ +PG DG A FY+ + G
Sbjct: 756 VLQCVQARVTPEMREGLAAPYQREEVWVALKDMGDLKAPGADGIPAIFYKKFLSLAG 812
>ref|XP_007227312.1| hypothetical protein PRUPE_ppa016553mg [Prunus persica]
gi|462424248|gb|EMJ28511.1| hypothetical protein
PRUPE_ppa016553mg [Prunus persica]
Length = 992
Score = 234 bits (598), Expect = 2e-58
Identities = 125/364 (34%), Positives = 200/364 (54%), Gaps = 6/364 (1%)
Frame = +1
Query: 3124 GRHIQDNVIIAHELLHTMKTKKI-KHALVGMKLDMSKAFDGV*WPFLLDILRHLGFHSDW 3300
GR I DN I+A E++H ++ ++ K + +K+DMSKA+D + W FL I+R LGF W
Sbjct: 188 GRLISDNTILAAEIIHYLRRRRRGKKGFMALKMDMSKAYDRIEWSFLEAIMRKLGFAEQW 247
Query: 3301 IALIEQCISTTDISLLINETPSACFKPSRGLRQGDPLSPYLLLFIMEAFSRLLEHHVDMG 3480
I L+ CIST S +IN TP PSRGLRQGDPLSPYL L E + L+ G
Sbjct: 248 IQLMLTCISTVSYSFVINGTPHGFLHPSRGLRQGDPLSPYLFLLCAEGLTALIAQKEREG 307
Query: 3481 MLQGLKIGKHCPAINHLFFADDCLLFFQENATQMNLLKDLLHIFSQASGQVINLQKSTIF 3660
L+G+ I + PAI+HLFFADD LF N LKD+L + +A GQ +N QKS +
Sbjct: 308 FLKGVSICRGAPAISHLFFADDSFLFAWANMADCMALKDILDTYERALGQQVNFQKSAVC 367
Query: 3661 FGKHTSPSQKTSINGILNLSQMGVGEKYLRIPLLLHRSRQKNCHGILNNMNIRLQGWQSK 3840
F K+ + + + + + +YL +P++L + + + + + + +LQ W+ K
Sbjct: 368 FSKNVHRGDQLMLAQFMGIPCVDHHSQYLGLPMVLDKKKGASFNHLKERLWKKLQTWKGK 427
Query: 3841 LVNQAGRTTQVNYVLSSMGMYQMKFFKLPESVLHQMDKI*RQYWWHNSP-----RLITWE 4005
L++ AG+ + V ++ +Y M F LP+ V ++K+ Q+WW++S + W+
Sbjct: 428 LLSGAGKEILIKVVAQAIPIYTMSCFLLPKYVCEDLNKLVAQFWWNSSTENKKIHWMAWD 487
Query: 4006 KVRLPKRXXXXXXXXXXNYNYAFLAKLAWQLLHNQDAMWGKLLKGGQWYSH*YLDFKLDS 4185
++ PK +N A LAK W+LL N D++ K+LK + + +L+ +
Sbjct: 488 RLCAPKEEGGLGFRNLHAFNLALLAKQGWRLLQNPDSLVTKVLKAKYFPTRSFLETTVSP 547
Query: 4186 FFTI 4197
+ ++
Sbjct: 548 YASV 551
Score = 100 bits (250), Expect = 6e-18
Identities = 81/327 (24%), Positives = 133/327 (40%), Gaps = 23/327 (7%)
Frame = +3
Query: 4257 LTLKLLDQEDTLVWPYTASGVFTTSSCY----KLLCQQDNISSTTLNLSPRFWLKFWKLN 4424
+ L L D LVW Y G+FT S Y L SS+ + R W WK
Sbjct: 637 IPLSLRLTPDMLVWHYDKKGMFTVKSAYHVARSLHSSTGRASSSNSDAVARNWSLLWKAI 696
Query: 4425 MPYKYQIFLWKGLHNALPVKARLFTPMNYVDQQCVLCNSSHSEDIDHLLLNCPFSRAI-- 4598
+P + + F W+ + LP KA L +D++C+LC + + H+L +CP++
Sbjct: 697 VPARVKTFWWRVISGILPTKANLARKKVSLDEECMLCEGP-VKSLIHILRDCPWNNGAHS 755
Query: 4599 ---WRYFFPQQHTSMMQFASLL--SWVQTWQSHDSQINIHSTPRVIRIIVFIMHFIRKHR 4763
W +Q +S FA+ L W W++ +
Sbjct: 756 PKDWVCRCAEQLSSQ-DFATFLMVGWA-IWEARNG------------------------- 788
Query: 4764 CKVIFSNLSPNHTSVIHQVSFYIAKHQLHAASSIPAFFKYV-----------VNDVWNPP 4910
++++N H V LHA+ + F + + +W PP
Sbjct: 789 --LLWNNKKSRHEQV-----------SLHASLRLHDFLRVSNCLGSQSRQGQIKQMWQPP 835
Query: 4911 PLNVLKINIDASYKPLSLLAGIGIIIRNDAGQYVSGKST-VRRVIDIHQXXXXXXXXXXX 5087
N LKIN+D ++KP + G+G+++R+ G++V+G +T + V Q
Sbjct: 836 HENSLKINVDGAWKPGTTEGGVGVVVRDSTGKFVAGCATKLTNVFSAPQVEALAARTNTI 895
Query: 5088 XXTSNGWSNVVFETDNLNISSYVNNQS 5168
G+ NVVFE+D L I + + N S
Sbjct: 896 LAMERGYQNVVFESDALQIVTALRNHS 922