BLASTX nr result

ID: Papaver25_contig00000112 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver25_contig00000112
         (2266 letters)

Database: ./nr 
           38,876,450 sequences; 13,856,398,315 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|YP_003540978.1| hypothetical chloroplast RF68 [Phoenix dacty...    59   1e-05

>ref|YP_003540978.1| hypothetical chloroplast RF68 [Phoenix dactylifera]
            gi|292559577|ref|YP_003540992.1| hypothetical chloroplast
            RF68 [Phoenix dactylifera]
            gi|377819425|ref|YP_005097920.1| hypothetical protein
            ycf68 (chloroplast) [Colocasia esculenta]
            gi|377819438|ref|YP_005097933.1| hypothetical protein
            ycf68 (chloroplast) [Colocasia esculenta]
            gi|294620624|gb|ADF28193.1| hypothetical chloroplast RF68
            (chloroplast) [Phoenix dactylifera]
            gi|294620638|gb|ADF28207.1| hypothetical chloroplast RF68
            (chloroplast) [Phoenix dactylifera]
            gi|340536686|gb|AEK48453.1| hypothetical protein ycf68
            (chloroplast) [Colocasia esculenta]
            gi|340536699|gb|AEK48466.1| hypothetical protein ycf68
            (chloroplast) [Colocasia esculenta]
            gi|340536773|gb|AEK48539.1| hypothetical protein ycf68
            (chloroplast) [Colocasia esculenta]
            gi|340536786|gb|AEK48552.1| hypothetical protein ycf68
            (chloroplast) [Colocasia esculenta]
          Length = 114

 Score = 58.9 bits (141), Expect = 1e-05
 Identities = 29/34 (85%), Positives = 30/34 (88%)
 Frame = -3

Query: 2000 RKLSSRESIHPLSVYV*LSLEHMFRFGLSGKMEH 1899
            R LSSRESIHPLSVY  LSLEH FRFGL+GKMEH
Sbjct: 38   RLLSSRESIHPLSVYGQLSLEHRFRFGLNGKMEH 71


Top