BLASTX nr result

ID: Papaver23_contig00036009 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00036009
         (499 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABA98491.1| retrotransposon protein, putative, unclassified [...    93   2e-17
gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza ...    93   2e-17
gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indi...    93   2e-17
gb|AAP53315.2| retrotransposon protein, putative, unclassified [...    93   2e-17
gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japo...    90   2e-16

>gb|ABA98491.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1621

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
 Frame = -2

Query: 495  KVSDLINSETRSWDVDLLSALFNEQTVSKITQIRIPLHGVDRIRWTLTNNGCFSVKSAYR 316
            KV +LI+  T +WD DLLS  F E+ V+ I  I + +   D + W     GCF+VKSAY+
Sbjct: 1215 KVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYK 1274

Query: 315  FILN-----SRIDMSSVPNSQFP----WTRFWQVHLPRKILFFLWKCIQECIPVRDRLHK 163
                     SR     V N +      W + W++ +P KI  FLW+     + +R  LH 
Sbjct: 1275 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHH 1334

Query: 162  VMNNIDSSCPFCRNCSETAQHLFIECNYAKEMWISID 52
               ++D+ C  C   +E A HLF +C   K++W +++
Sbjct: 1335 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALN 1371


>gb|AAM18736.1|AC092548_14 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1509

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
 Frame = -2

Query: 495  KVSDLINSETRSWDVDLLSALFNEQTVSKITQIRIPLHGVDRIRWTLTNNGCFSVKSAYR 316
            KV +LI+  T +WD DLLS  F E+ V+ I  I + +   D + W     GCF+VKSAY+
Sbjct: 1160 KVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYK 1219

Query: 315  FILN-----SRIDMSSVPNSQFP----WTRFWQVHLPRKILFFLWKCIQECIPVRDRLHK 163
                     SR     V N +      W + W++ +P KI  FLW+     + +R  LH 
Sbjct: 1220 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHH 1279

Query: 162  VMNNIDSSCPFCRNCSETAQHLFIECNYAKEMWISID 52
               ++D+ C  C   +E A HLF +C   K++W +++
Sbjct: 1280 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALN 1316


>gb|EEC81662.1| hypothetical protein OsI_25211 [Oryza sativa Indica Group]
          Length = 561

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
 Frame = -2

Query: 495 KVSDLINSETRSWDVDLLSALFNEQTVSKITQIRIPLHGVDRIRWTLTNNGCFSVKSAYR 316
           KV +LI+  T +WD DLLS  F E+ V+ I  I + +   D + W     GCF+VKSAY+
Sbjct: 155 KVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYK 214

Query: 315 FILN-----SRIDMSSVPNSQFP----WTRFWQVHLPRKILFFLWKCIQECIPVRDRLHK 163
                    SR     V N +      W + W++ +P KI  FLW+     + +R  LH 
Sbjct: 215 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHH 274

Query: 162 VMNNIDSSCPFCRNCSETAQHLFIECNYAKEMWISID 52
              ++D+ C  C   +E A HLF +C   K++W +++
Sbjct: 275 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALN 311


>gb|AAP53315.2| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1505

 Score = 93.2 bits (230), Expect = 2e-17
 Identities = 52/157 (33%), Positives = 80/157 (50%), Gaps = 9/157 (5%)
 Frame = -2

Query: 495  KVSDLINSETRSWDVDLLSALFNEQTVSKITQIRIPLHGVDRIRWTLTNNGCFSVKSAYR 316
            KV +LI+  T +WD DLLS  F E+ V+ I  I + +   D + W     GCF+VKSAY+
Sbjct: 1156 KVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYK 1215

Query: 315  FILN-----SRIDMSSVPNSQFP----WTRFWQVHLPRKILFFLWKCIQECIPVRDRLHK 163
                     SR     V N +      W + W++ +P KI  FLW+     + +R  LH 
Sbjct: 1216 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLHH 1275

Query: 162  VMNNIDSSCPFCRNCSETAQHLFIECNYAKEMWISID 52
               ++D+ C  C   +E A HLF +C   K++W +++
Sbjct: 1276 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALN 1312


>gb|EEE54600.1| hypothetical protein OsJ_01823 [Oryza sativa Japonica Group]
          Length = 639

 Score = 90.1 bits (222), Expect = 2e-16
 Identities = 51/157 (32%), Positives = 79/157 (50%), Gaps = 9/157 (5%)
 Frame = -2

Query: 495 KVSDLINSETRSWDVDLLSALFNEQTVSKITQIRIPLHGVDRIRWTLTNNGCFSVKSAYR 316
           KV +LI+  T +WD DLLS  F E+ V+ I  I + +   D + W     GCF+VKSAY+
Sbjct: 155 KVEELIDPYTGTWDEDLLSQTFWEEDVAAIKSIPVHVEMEDVLAWHFDARGCFTVKSAYK 214

Query: 315 FILN-----SRIDMSSVPNSQFP----WTRFWQVHLPRKILFFLWKCIQECIPVRDRLHK 163
                    SR     V N +      W + W++ +P KI  FLW+     + +R  L  
Sbjct: 215 VQREMERRASRNGCPGVSNWESGDDDFWKKLWKLGVPGKIKHFLWRMCHNTLALRANLQH 274

Query: 162 VMNNIDSSCPFCRNCSETAQHLFIECNYAKEMWISID 52
              ++D+ C  C   +E A HLF +C   K++W +++
Sbjct: 275 RGMDVDTRCVMCGRYNEDAGHLFFKCKPVKKVWQALN 311


Top