BLASTX nr result

ID: Papaver23_contig00035952 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035952
         (547 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]   193   1e-47
ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containi...   193   1e-47
ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containi...   185   5e-45
ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containi...   176   2e-42
ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containi...   174   6e-42

>emb|CAN59994.1| hypothetical protein VITISV_012660 [Vitis vinifera]
          Length = 768

 Score =  193 bits (490), Expect(2) = 1e-47
 Identities = 89/152 (58%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
 Frame = -3

Query: 545  GVTFVGLLLACVHSGLVDEGMRLFSLMTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFI 366
            G TFVG+L AC  +GLV+EGM++F  M   Y++ P LEHY CVVDLLGR+G ++EAE FI
Sbjct: 568  GATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFI 627

Query: 365  DGMMLEPDWIIWGSLLRSCWSWMDMEIGERVAEKLLRLDPDQITPYVIMSNIYAAVRKWG 186
              M LE D ++WG+LL +CW WMD+E+GERVAEK+   DP  I+ YVI+SNIYA + +W 
Sbjct: 628  KKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWR 687

Query: 185  KVEEVRKKLRSMKVKKDPGCSWVEVKN-THVF 93
            +   VRK LR  KVKKDPGCSW+E+ N  HVF
Sbjct: 688  EKMMVRKILRGFKVKKDPGCSWIELNNKIHVF 719



 Score = 22.3 bits (46), Expect(2) = 1e-47
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 94  FSIEC*TRP*CIEIYTTPEDLT 29
           FSIE  + P C  IY T E LT
Sbjct: 719 FSIEDRSHPYCNMIYATLEHLT 740


>ref|XP_002267928.1| PREDICTED: pentatricopeptide repeat-containing protein At3g57430,
           chloroplastic [Vitis vinifera]
           gi|302143682|emb|CBI22543.3| unnamed protein product
           [Vitis vinifera]
          Length = 728

 Score =  193 bits (490), Expect(2) = 1e-47
 Identities = 89/152 (58%), Positives = 113/152 (74%), Gaps = 1/152 (0%)
 Frame = -3

Query: 545 GVTFVGLLLACVHSGLVDEGMRLFSLMTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFI 366
           G TFVG+L AC  +GLV+EGM++F  M   Y++ P LEHY CVVDLLGR+G ++EAE FI
Sbjct: 528 GATFVGVLSACSRAGLVNEGMKIFHSMERCYSVTPTLEHYACVVDLLGRSGHIREAEEFI 587

Query: 365 DGMMLEPDWIIWGSLLRSCWSWMDMEIGERVAEKLLRLDPDQITPYVIMSNIYAAVRKWG 186
             M LE D ++WG+LL +CW WMD+E+GERVAEK+   DP  I+ YVI+SNIYA + +W 
Sbjct: 588 KKMPLEADGVVWGALLSACWFWMDLEVGERVAEKMFSFDPKPISSYVILSNIYAGLGRWR 647

Query: 185 KVEEVRKKLRSMKVKKDPGCSWVEVKN-THVF 93
           +   VRK LR  KVKKDPGCSW+E+ N  HVF
Sbjct: 648 EKMMVRKILRGFKVKKDPGCSWIELNNKIHVF 679



 Score = 22.3 bits (46), Expect(2) = 1e-47
 Identities = 12/22 (54%), Positives = 13/22 (59%)
 Frame = -1

Query: 94  FSIEC*TRP*CIEIYTTPEDLT 29
           FSIE  + P C  IY T E LT
Sbjct: 679 FSIEDRSHPYCNMIYATLEHLT 700


>ref|XP_003528496.1| PREDICTED: pentatricopeptide repeat-containing protein
           At4g02750-like [Glycine max]
          Length = 728

 Score =  185 bits (469), Expect = 5e-45
 Identities = 84/150 (56%), Positives = 114/150 (76%), Gaps = 1/150 (0%)
 Frame = -3

Query: 539 TFVGLLLACVHSGLVDEGMRLFSLMTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFIDG 360
           TFVG+L AC H+GLV EG+R+F  M   Y + P +EHY CVVDLLGR+G LKEAE FI  
Sbjct: 540 TFVGVLSACNHAGLVCEGLRIFHSMQRCYGVTPTIEHYTCVVDLLGRSGHLKEAEEFIIK 599

Query: 359 MMLEPDWIIWGSLLRSCWSWMDMEIGERVAEKLLRLDPDQITPYVIMSNIYAAVRKWGKV 180
           M +E D IIWG+LL + W W DME+GER AEKL  LDP+ I  +V++SN+YA + +WG+ 
Sbjct: 600 MPIEADGIIWGALLNASWFWKDMEVGERAAEKLFSLDPNPIFAFVVLSNMYAILGRWGQK 659

Query: 179 EEVRKKLRSMKVKKDPGCSWVEVKN-THVF 93
            ++RK+L+S++++KDPGCSW+E+ N  H+F
Sbjct: 660 TKLRKRLQSLELRKDPGCSWIELNNKIHLF 689


>ref|XP_004170508.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  176 bits (446), Expect = 2e-42
 Identities = 83/147 (56%), Positives = 107/147 (72%)
 Frame = -3

Query: 545 GVTFVGLLLACVHSGLVDEGMRLFSLMTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFI 366
           G T +G+L AC  +G+V EGM +F  M   Y + P LEHY CVVDLLGR+GRL EAE FI
Sbjct: 533 GATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFI 592

Query: 365 DGMMLEPDWIIWGSLLRSCWSWMDMEIGERVAEKLLRLDPDQITPYVIMSNIYAAVRKWG 186
             M +E D +IWG+LL +CW WMD+E+GE VA+K+L LDP  I+ Y+I+SNIYA + KW 
Sbjct: 593 RCMPIEADRVIWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWV 652

Query: 185 KVEEVRKKLRSMKVKKDPGCSWVEVKN 105
           +   VR+KL S+KVKK  GCSW++V N
Sbjct: 653 EKINVRRKLMSLKVKKIRGCSWIDVNN 679


>ref|XP_004145982.1| PREDICTED: pentatricopeptide repeat-containing protein At3g09040,
           mitochondrial-like [Cucumis sativus]
          Length = 710

 Score =  174 bits (442), Expect = 6e-42
 Identities = 82/147 (55%), Positives = 107/147 (72%)
 Frame = -3

Query: 545 GVTFVGLLLACVHSGLVDEGMRLFSLMTSDYNIEPMLEHYCCVVDLLGRAGRLKEAENFI 366
           G T +G+L AC  +G+V EGM +F  M   Y + P LEHY CVVDLLGR+GRL EAE FI
Sbjct: 533 GATLLGILSACSCAGMVKEGMTVFHSMEKCYGVIPTLEHYACVVDLLGRSGRLYEAEAFI 592

Query: 365 DGMMLEPDWIIWGSLLRSCWSWMDMEIGERVAEKLLRLDPDQITPYVIMSNIYAAVRKWG 186
             M +E D +IWG+LL +CW WMD+E+GE VA+K+L LDP  I+ Y+I+SNIYA + KW 
Sbjct: 593 RCMPIEADRVIWGALLNACWFWMDLELGESVAKKVLSLDPKAISAYIILSNIYAKLGKWV 652

Query: 185 KVEEVRKKLRSMKVKKDPGCSWVEVKN 105
           +   VR++L S+KVKK  GCSW++V N
Sbjct: 653 EKINVRRQLMSLKVKKIRGCSWIDVNN 679


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