BLASTX nr result

ID: Papaver23_contig00035931 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035931
         (437 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAD24831.1| putative non-LTR retroelement reverse transcripta...    63   3e-08
gb|AAD20714.1| putative non-LTR retroelement reverse transcripta...    63   3e-08
ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [S...    52   9e-08
ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [S...    52   2e-07
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    43   4e-07

>gb|AAD24831.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1524

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/100 (40%), Positives = 57/100 (57%)
 Frame = +3

Query: 9   LQYQNLSTVPKTGRRGELCLMWKNNINI*ILLQCQSYIHALVTPSNQGKPWLRTRVYDPP 188
           L + N+ T P  GR G L LMWKNN+++ ++ Q +  I + VT +N  K +  + VY  P
Sbjct: 206 LGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHVTFNN--KSFYLSCVYGHP 263

Query: 189 QIDARIDLWQDFPSIFPDNITLAS*VLIGDFNEIMNQSEK 308
               R  LWQ    I  DN   A  +L+GDFNEI++ +EK
Sbjct: 264 TQSERHQLWQTLEHI-SDNRN-AEWLLVGDFNEILSNAEK 301


>gb|AAD20714.1| putative non-LTR retroelement reverse transcriptase [Arabidopsis
           thaliana]
          Length = 1750

 Score = 62.8 bits (151), Expect = 3e-08
 Identities = 40/100 (40%), Positives = 57/100 (57%)
 Frame = +3

Query: 9   LQYQNLSTVPKTGRRGELCLMWKNNINI*ILLQCQSYIHALVTPSNQGKPWLRTRVYDPP 188
           L + N+ T P  GR G L LMWKNN+++ ++ Q +  I + VT +N  K +  + VY  P
Sbjct: 432 LGFPNVITQPPNGRSGGLALMWKNNVSLSLISQDERLIDSHVTFNN--KSFYLSCVYGHP 489

Query: 189 QIDARIDLWQDFPSIFPDNITLAS*VLIGDFNEIMNQSEK 308
               R  LWQ    I  DN   A  +L+GDFNEI++ +EK
Sbjct: 490 TQSERHQLWQTLEHI-SDNRN-AEWLLVGDFNEILSNAEK 527


>ref|XP_002450843.1| hypothetical protein SORBIDRAFT_05g019526 [Sorghum bicolor]
           gi|241936686|gb|EES09831.1| hypothetical protein
           SORBIDRAFT_05g019526 [Sorghum bicolor]
          Length = 1209

 Score = 52.4 bits (124), Expect(2) = 9e-08
 Identities = 31/88 (35%), Positives = 46/88 (52%)
 Frame = +3

Query: 42  TGRRGELCLMWKNNINI*ILLQCQSYIHALVTPSNQGKPWLRTRVYDPPQIDARIDLWQD 221
           TGR G L + W N I++ +L   + +I  +++      PW  T VY   QI  R   W  
Sbjct: 326 TGRSGGLGIFWNNKISVQLLPYSKYHIDVIIS-EGSADPWRLTCVYGEAQIVERYKTWDM 384

Query: 222 FPSIFPDNITLAS*VLIGDFNEIMNQSE 305
             SI P+  +    V IGDFNE++++SE
Sbjct: 385 LKSIKPN--SSLPWVCIGDFNEVLHRSE 410



 Score = 28.5 bits (62), Expect(2) = 9e-08
 Identities = 12/35 (34%), Positives = 18/35 (51%)
 Frame = +2

Query: 329 TYSQTQPFLTMIDQMGFIDLGFRGDPYTWTNNQQG 433
           +Y+Q   F  M+D  G  DLG+ G  +T+     G
Sbjct: 418 SYAQIAGFREMVDVCGLCDLGYEGRSWTYEKKVTG 452


>ref|XP_002445372.1| hypothetical protein SORBIDRAFT_07g013775 [Sorghum bicolor]
           gi|241941722|gb|EES14867.1| hypothetical protein
           SORBIDRAFT_07g013775 [Sorghum bicolor]
          Length = 589

 Score = 52.0 bits (123), Expect(2) = 2e-07
 Identities = 26/101 (25%), Positives = 53/101 (52%)
 Frame = +3

Query: 9   LQYQNLSTVPKTGRRGELCLMWKNNINI*ILLQCQSYIHALVTPSNQGKPWLRTRVYDPP 188
           L ++N+  V   G+ G L ++W+  +++ +  + +++I   V+ + +G PW  T +Y  P
Sbjct: 297 LGFENMEVVDCVGKGGGLAVLWRRGVDVVLRSKSKNHIDMEVSET-RGNPWRFTGIYGEP 355

Query: 189 QIDARIDLWQDFPSIFPDNITLAS*VLIGDFNEIMNQSEKK 311
           Q   +   WQ    +   +    + +  GDFNE++ Q EK+
Sbjct: 356 QEAMKWKTWQLLQDLAAQHQNNQAWLCAGDFNEVLYQHEKE 396



 Score = 27.7 bits (60), Expect(2) = 2e-07
 Identities = 13/41 (31%), Positives = 20/41 (48%)
 Frame = +2

Query: 305 KKKGGRLVTYSQTQPFLTMIDQMGFIDLGFRGDPYTWTNNQ 427
           +K+GG     +    F   ++     DLGF G+ +TW N Q
Sbjct: 394 EKEGGVPRPQNSMDRFKQALEVSELHDLGFEGNVFTWRNKQ 434


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 42.7 bits (99), Expect(2) = 4e-07
 Identities = 30/101 (29%), Positives = 47/101 (46%), Gaps = 1/101 (0%)
 Frame = +3

Query: 9   LQYQNLSTVPKTGRRGELCLMWKNNINI*ILLQCQ-SYIHALVTPSNQGKPWLRTRVYDP 185
           L Y N   +P  G+RG + LMWK +I +      Q ++ HAL    +     L T ++ P
Sbjct: 51  LGYVNFRIIPAFGKRGGIWLMWKADIALVHYADYQPNHFHALFKLRSDIPEVLLTGMHAP 110

Query: 186 PQIDARIDLWQDFPSIFPDNITLAS*VLIGDFNEIMNQSEK 308
             +  R   W D     P   T    ++ GD NE+++ +EK
Sbjct: 111 SVVSERNKYWVDLTEDSPPRGT--PWLVAGDMNEVLHGNEK 149



 Score = 35.8 bits (81), Expect(2) = 4e-07
 Identities = 17/43 (39%), Positives = 23/43 (53%)
 Frame = +2

Query: 305 KKKGGRLVTYSQTQPFLTMIDQMGFIDLGFRGDPYTWTNNQQG 433
           +K GGR V   Q +     I     +DLGF+G  +TWTN + G
Sbjct: 148 EKMGGRQVGKEQGKQCKDWIAANALLDLGFQGPKFTWTNGRTG 190


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