BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035793
         (464 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabid...   120   3e-27
gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon...   125   4e-27
gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa ...   125   4e-27
emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulga...   124   8e-27
emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulga...   123   1e-26

>emb|CAB39638.1| RNA-directed DNA polymerase-like protein [Arabidopsis thaliana]
           gi|7267666|emb|CAB78094.1| RNA-directed DNA
           polymerase-like protein [Arabidopsis thaliana]
          Length = 1274

 Score =  120 bits (300), Expect(2) = 3e-27
 Identities = 64/135 (47%), Positives = 84/135 (62%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   KPLLCKLISPYQSAYVPDRNIQNNVIIAHELVHSMKKKKDRTDI-MGLKLDMSKDFDRV* 178
           +P L +LIS +QSA+VP R I +NV+I HE++H ++    +    M +K DMSK +DR+ 
Sbjct: 467 QPWLSELISLHQSAFVPGRAIADNVLITHEILHFLRVSGAKKYCSMAIKTDMSKAYDRIK 526

Query: 179 WIFIINVLKRFGFSDHWCELIHQCVSTTNIYVLLNVSPCPSYKPTRCLRQGDPLSPYFFI 358
           W F+  VL R GF D W   + QCV T +   L+N SP  S  P+R LRQGDPLSPY FI
Sbjct: 527 WNFLQEVLMRLGFHDKWIRWVMQCVCTVSYSFLINGSPQGSVVPSRGLRQGDPLSPYLFI 586

Query: 359 LCMEEFSRYLLHAEE 403
           LC E  S     A+E
Sbjct: 587 LCTEVLSGLCRKAQE 601



 Score = 26.6 bits (57), Expect(2) = 3e-27
 Identities = 10/21 (47%), Positives = 16/21 (76%)
 Frame = +3

Query: 402 KLIIHGIKVTKEAPSINHLLF 464
           K ++ GI+V + +P +NHLLF
Sbjct: 602 KGVMVGIRVARGSPQVNHLLF 622


>gb|AAD40135.1|AF149413_16 contains similarity to retrotransposon Ta11-1 [Arabidopsis
           thaliana]
          Length = 220

 Score =  125 bits (314), Expect = 4e-27
 Identities = 63/135 (46%), Positives = 87/135 (64%), Gaps = 1/135 (0%)
 Frame = +2

Query: 2   KPLLCKLISPYQSAYVPDRNIQNNVIIAHELVHSMKKKKDRT-DIMGLKLDMSKDFDRV* 178
           KP+L  L+SP QSA+V +R I +N +IAHE+VHS++     + D M +K D+SK FDRV 
Sbjct: 26  KPILADLVSPTQSAFVEERLISDNTLIAHEIVHSLRTHDSMSKDFMAIKTDLSKAFDRVE 85

Query: 179 WIFIINVLKRFGFSDHWCELIHQCVSTTNIYVLLNVSPCPSYKPTRCLRQGDPLSPYFFI 358
           W ++ ++L   GF + W EL+  CV+T +  VL+N  P     P R LRQGDPLSP+ F+
Sbjct: 86  WSYLRHLLLALGFHNDWVELVMSCVTTVSYTVLVNGHPHGLVVPQRGLRQGDPLSPFLFV 145

Query: 359 LCMEEFSRYLLHAEE 403
           LC E  S  L  AE+
Sbjct: 146 LCTEGLSHLLNRAEQ 160


>gb|AFP55574.1| non-ltr retroelement reverse transcriptase [Rosa rugosa]
          Length = 1656

 Score =  125 bits (314), Expect = 4e-27
 Identities = 62/130 (47%), Positives = 88/130 (67%), Gaps = 1/130 (0%)
 Frame = +2

Query: 2    KPLLCKLISPYQSAYVPDRNIQNNVIIAHELVHSMKKKKD-RTDIMGLKLDMSKDFDRV* 178
            +P + +LIS  QSA+V +R IQ+NVIIAHE+ H +K  +       GLKLDM+K +DRV 
Sbjct: 1135 QPFMSELISDNQSAFVSNRQIQDNVIIAHEIYHHLKLTRSCNNGAFGLKLDMNKAYDRVE 1194

Query: 179  WIFIINVLKRFGFSDHWCELIHQCVSTTNIYVLLNVSPCPSYKPTRCLRQGDPLSPYFFI 358
            W F+  VL++ GF D W  L+  CV+T+++ VL+N  P PS+ P+R LRQGDPLSP+ F+
Sbjct: 1195 WNFLEAVLRKMGFVDSWIGLVMSCVTTSSLSVLINGKPGPSFLPSRGLRQGDPLSPFLFL 1254

Query: 359  LCMEEFSRYL 388
               +  SR +
Sbjct: 1255 FVNDVLSRMI 1264


>emb|CCA66009.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1378

 Score =  124 bits (311), Expect = 8e-27
 Identities = 59/139 (42%), Positives = 86/139 (61%)
 Frame = +2

Query: 2   KPLLCKLISPYQSAYVPDRNIQNNVIIAHELVHSMKKKKDRTDIMGLKLDMSKDFDRV*W 181
           KP+L  LISP Q ++VP+R I +NVII  E+ HSM+ K+ +   M +K+D  K +DR+ W
Sbjct: 533 KPILPSLISPTQCSFVPNRQITDNVIIVQEMFHSMRNKQGKKGFMAVKIDFEKAYDRLRW 592

Query: 182 IFIINVLKRFGFSDHWCELIHQCVSTTNIYVLLNVSPCPSYKPTRCLRQGDPLSPYFFIL 361
            FI   L       H  +++  CVS+ N+ +L N  P     PTR LRQGDPLSPY +++
Sbjct: 593 TFIRESLMELRIPQHLVDIVMNCVSSANLQILWNGEPMEKICPTRGLRQGDPLSPYLYVI 652

Query: 362 CMEEFSRYLLHAEETDHSW 418
           CME  + +L+  E T+ +W
Sbjct: 653 CMERLA-HLIDQEVTNGNW 670


>emb|CCA65995.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1389

 Score =  123 bits (309), Expect = 1e-26
 Identities = 59/127 (46%), Positives = 82/127 (64%)
 Frame = +2

Query: 2   KPLLCKLISPYQSAYVPDRNIQNNVIIAHELVHSMKKKKDRTDIMGLKLDMSKDFDRV*W 181
           K  L K+I P Q A++P+R IQ+N++IAHE+ HS K K  R   + +KLDM K +DR+ W
Sbjct: 542 KITLGKIIHPLQGAFIPERLIQDNILIAHEVFHSFKNKTGRGGWIAIKLDMEKAYDRLEW 601

Query: 182 IFIINVLKRFGFSDHWCELIHQCVSTTNIYVLLNVSPCPSYKPTRCLRQGDPLSPYFFIL 361
            +I   + + GFS  W E I  C+S+ +  VL+N  P   + P+R +RQGDPLSPY FIL
Sbjct: 602 KYIYTTMDKMGFSPIWIEWIRSCISSASFSVLVNGIPGERFFPSRGIRQGDPLSPYLFIL 661

Query: 362 CMEEFSR 382
           C E  +R
Sbjct: 662 CAELLAR 668