BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035786
         (448 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptas...   107   1e-21
gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thali...    93   3e-17
gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CA...    93   3e-17
gb|ABD32279.2| reverse transcriptase, putative [Medicago truncat...    92   6e-17
emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulga...    91   1e-16

>gb|ABD28670.2| RNA-directed DNA polymerase (Reverse transcriptase) [Medicago
           truncatula]
          Length = 642

 Score =  107 bits (267), Expect = 1e-21
 Identities = 54/133 (40%), Positives = 76/133 (57%)
 Frame = -2

Query: 399 SRKGVAPSHLFFADDIMIFCKGNMKSLRNLVNLLELYQRASGQTVSRQKSKLYYGGGSLS 220
           SR    P H F+ DD+M+FCK  M SL  L +L   Y   SGQ ++ +KS ++ GG + +
Sbjct: 417 SRNNCLPFHCFYVDDLMVFCKAKMSSLIVLKSLFTRYADCSGQIMNIRKSFIFAGGITDT 476

Query: 219 RRRTISNFLGMNVATFPDRYLGVKVMKGTVRYSHISNVVEQIKNQLAGWKGKLLSFQDRV 40
           R   I N LG NV + P  YLG  + KG  +  H   + +++K +LA WK  LLS   R+
Sbjct: 477 RMNNIVNILGFNVGSLPFTYLGAPIFKGKPKGIHFQPIADKVKAKLAKWKASLLSIAGRI 536

Query: 39  VLVKSVITSFSIH 1
            LVKSV+ S  +H
Sbjct: 537 QLVKSVVQSMLVH 549


>gb|AAC78274.1| putative reverse transcriptase [Arabidopsis thaliana]
          Length = 543

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/129 (36%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
 Frame = -2

Query: 393 KGVAP--SHLFFADDIMIFCKGNMKSLRNLVNLLELYQRASGQTVSRQKSKLYYGGGSLS 220
           K +AP  +HL FADDI++FC G++ SL  ++++L+++++ SG  ++ QK+ L   GG+  
Sbjct: 233 KCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGNFE 292

Query: 219 RRRTISNFLGMNVATFPDRYLGVKVMKGTVRYSHISNVVEQIKNQLAGWKGKLLSFQDRV 40
           R R ++  LG++  + P RYLGV +M   ++      +V++I ++   W  + LSF  R+
Sbjct: 293 RNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRL 352

Query: 39  VLVKSVITS 13
            L+KSVI S
Sbjct: 353 QLLKSVIYS 361


>gb|AAC19278.1| T14P8.10 [Arabidopsis thaliana] gi|7269009|emb|CAB80742.1|
           AT4g02490 [Arabidopsis thaliana]
          Length = 657

 Score = 92.8 bits (229), Expect = 3e-17
 Identities = 47/129 (36%), Positives = 82/129 (63%), Gaps = 2/129 (1%)
 Frame = -2

Query: 393 KGVAP--SHLFFADDIMIFCKGNMKSLRNLVNLLELYQRASGQTVSRQKSKLYYGGGSLS 220
           K +AP  +HL FADDI++FC G++ SL  ++++L+++++ SG  ++ QK+ L   GG+  
Sbjct: 233 KCLAPMITHLSFADDILVFCDGSLSSLVAILDILDVFKKGSGLGINLQKTALLLDGGNFE 292

Query: 219 RRRTISNFLGMNVATFPDRYLGVKVMKGTVRYSHISNVVEQIKNQLAGWKGKLLSFQDRV 40
           R R ++  LG++  + P RYLGV +M   ++      +V++I ++   W  + LSF  R+
Sbjct: 293 RNRIMAASLGVSQGSLPVRYLGVPLMSQKMKKHDYQPLVDRINSRFTSWTARHLSFAGRL 352

Query: 39  VLVKSVITS 13
            L+KSVI S
Sbjct: 353 QLLKSVIYS 361


>gb|ABD32279.2| reverse transcriptase, putative [Medicago truncatula]
          Length = 480

 Score = 91.7 bits (226), Expect = 6e-17
 Identities = 44/127 (34%), Positives = 72/127 (56%)
 Frame = -2

Query: 381 PSHLFFADDIMIFCKGNMKSLRNLVNLLELYQRASGQTVSRQKSKLYYGGGSLSRRRTIS 202
           P+H+ +ADD++IFC G  +++R L+     Y   S Q ++  KS+ Y G  + S  + I+
Sbjct: 151 PTHILYADDVLIFCAGTKQNIRCLLKFFNDYSEVSAQIINNNKSQFYAGAMTTSHSQMIA 210

Query: 201 NFLGMNVATFPDRYLGVKVMKGTVRYSHISNVVEQIKNQLAGWKGKLLSFQDRVVLVKSV 22
             LG +    P  YLG  + KG ++  +  ++V++IK + A WK  LLS   RV LVKS+
Sbjct: 211 GTLGFSADNIPFFYLGCPIFKGKLKGIYFQSIVDRIKVKFAIWKCTLLSIMGRVELVKSI 270

Query: 21  ITSFSIH 1
           I    ++
Sbjct: 271 IHGMLVY 277


>emb|CCA66054.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1355

 Score = 90.9 bits (224), Expect = 1e-16
 Identities = 48/128 (37%), Positives = 80/128 (62%), Gaps = 1/128 (0%)
 Frame = -2

Query: 399  SRKGVAPSHLFFADDIMIFCKGNMKSLRNLVNLLELYQRASGQTVSRQKSKLYYGGG-SL 223
            SR G   SHLFFADD ++F + N +    +V++L  Y+ ASGQ ++ +KS++ Y  G S+
Sbjct: 674  SRSGPEISHLFFADDSLLFTRANRQECTIIVDILNQYELASGQKINYEKSEVSYSRGVSV 733

Query: 222  SRRRTISNFLGMNVATFPDRYLGVKVMKGTVRYSHISNVVEQIKNQLAGWKGKLLSFQDR 43
            S++  ++N L M      ++YLG+  + G  + +   +++++I  +L GWK KLLS   +
Sbjct: 734  SQKDELTNILNMRQVDRHEKYLGIPSISGRSKKAIFDSLIDRIWKKLQGWKEKLLSRAGK 793

Query: 42   VVLVKSVI 19
             VL+KSVI
Sbjct: 794  EVLLKSVI 801