BLASTX nr result

ID: Papaver23_contig00035712 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035712
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza ...    47   3e-10
gb|ABF97084.1| retrotransposon protein, putative, unclassified [...    47   3e-10
gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indi...    49   5e-10
emb|CCD74510.1| unknown, partial [Arabidopsis halleri subsp. hal...    50   1e-09
dbj|BAI67988.1| hypothetical protein [Oryza sativa Indica Group]...    42   1e-08

>gb|AAK52166.1|AC084831_20 putative reverse transcriptase [Oryza sativa Japonica Group]
          Length = 1185

 Score = 46.6 bits (109), Expect(2) = 3e-10
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = -1

Query: 233  QNRLPSSSINTEDFNWKKLWMIKVLPPKVQMFLWRLLNNGLAVGNRLMKFVKGINADCKF 54
            + RLP  + ++    W  LW +++ PPK+++F WR+L+  +     L      +   C  
Sbjct: 845  KERLPDGASSSSRPVWDNLWKLEI-PPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPV 903

Query: 53   CQQAVETVDHLFLHCQ 6
            C   VE + H+   C+
Sbjct: 904  CSSGVEDIKHMVFTCR 919



 Score = 42.7 bits (99), Expect(2) = 3e-10
 Identities = 26/62 (41%), Positives = 34/62 (54%)
 Frame = -2

Query: 433 TKVSELILKNPNR*DEEKIDQLFNPVDASRIKELYIPFAHEDTIKDKWIWLHHPNGTFSA 254
           TKV ELI       DE+ ID LF P+DA+RI ++ I    ED +     W H  +G FS 
Sbjct: 775 TKVEELINPVSGGWDEDLIDTLFWPIDANRILQIPISAGREDFV----AWHHTRSGIFSV 830

Query: 253 KS 248
           +S
Sbjct: 831 RS 832


>gb|ABF97084.1| retrotransposon protein, putative, unclassified [Oryza sativa
            Japonica Group]
          Length = 1184

 Score = 46.6 bits (109), Expect(2) = 3e-10
 Identities = 20/76 (26%), Positives = 37/76 (48%)
 Frame = -1

Query: 233  QNRLPSSSINTEDFNWKKLWMIKVLPPKVQMFLWRLLNNGLAVGNRLMKFVKGINADCKF 54
            + RLP  + ++    W  LW +++ PPK+++F WR+L+  +     L      +   C  
Sbjct: 845  KERLPDGASSSSRPVWDNLWKLEI-PPKIKIFAWRMLHGVIPCKGILADKHIAVQGGCPV 903

Query: 53   CQQAVETVDHLFLHCQ 6
            C   VE + H+   C+
Sbjct: 904  CSSGVEDIKHMVFTCR 919



 Score = 42.7 bits (99), Expect(2) = 3e-10
 Identities = 26/62 (41%), Positives = 34/62 (54%)
 Frame = -2

Query: 433 TKVSELILKNPNR*DEEKIDQLFNPVDASRIKELYIPFAHEDTIKDKWIWLHHPNGTFSA 254
           TKV ELI       DE+ ID LF P+DA+RI ++ I    ED +     W H  +G FS 
Sbjct: 775 TKVEELINPVSGGWDEDLIDTLFWPIDANRILQIPISAGREDFV----AWHHTRSGIFSV 830

Query: 253 KS 248
           +S
Sbjct: 831 RS 832


>gb|EAZ08213.1| hypothetical protein OsI_30472 [Oryza sativa Indica Group]
          Length = 398

 Score = 49.3 bits (116), Expect(2) = 5e-10
 Identities = 29/72 (40%), Positives = 38/72 (52%), Gaps = 2/72 (2%)
 Frame = -1

Query: 215 SSINTEDFNWKKLWMIKVLPPKVQMFLWRLLNNGLAVGNRLMKFVKGINAD--CKFCQQA 42
           S   T  F+W K+W  KV   KVQMF+W   +N LAV   L +  KG+  D  C  C++ 
Sbjct: 234 SVYGTHTFDWLKIWRCKVAH-KVQMFVWWFTHNSLAVRCNLAR--KGVEIDKICPVCKRF 290

Query: 41  VETVDHLFLHCQ 6
            E   HLF  C+
Sbjct: 291 DEDNGHLFFKCK 302



 Score = 39.3 bits (90), Expect(2) = 5e-10
 Identities = 29/74 (39%), Positives = 37/74 (50%)
 Frame = -2

Query: 469 TPMSPAIINEGPTKVSELILKNPNR*DEEKIDQLFNPVDASRIKELYIPFAHEDTIKDKW 290
           TP + +I+    TKVSELI       DE  ID  F  VDA  IK++ +     D + D  
Sbjct: 146 TPRAGSIL----TKVSELIDPVLGEWDEALIDDNFWNVDAEEIKKIPL----HDGVDDWA 197

Query: 289 IWLHHPNGTFSAKS 248
            W + P G FS KS
Sbjct: 198 AWRYDPKGVFSVKS 211


>emb|CCD74510.1| unknown, partial [Arabidopsis halleri subsp. halleri]
          Length = 300

 Score = 50.4 bits (119), Expect(2) = 1e-09
 Identities = 30/82 (36%), Positives = 44/82 (53%), Gaps = 1/82 (1%)
 Frame = -1

Query: 245 LKTLQNRLPSSSINTEDFNWKK-LWMIKVLPPKVQMFLWRLLNNGLAVGNRLMKFVKGIN 69
           LK +++   S+ IN + F WK+ +W IK   PK ++ LW+ + N L VG  L      + 
Sbjct: 74  LKEIESEEISNPIN-QGFKWKEDIWSIKS-SPKTKILLWKAMQNALPVGENLKHRNINLT 131

Query: 68  ADCKFCQQAVETVDHLFLHCQV 3
           A C  C +  ETV HLF  C +
Sbjct: 132 AQCPHCGED-ETVTHLFFSCSL 152



 Score = 37.0 bits (84), Expect(2) = 1e-09
 Identities = 21/72 (29%), Positives = 36/72 (50%)
 Frame = -2

Query: 463 MSPAIINEGPTKVSELILKNPNR*DEEKIDQLFNPVDASRIKELYIPFAHEDTIKDKWIW 284
           M PA ++    +VS LIL N    + E I ++      +  KE+ +    +   KDKW+W
Sbjct: 1   MGPATVSTKNMRVSSLILPNSGEWNREMIQEIL----PAHEKEIIMLKPSKLGAKDKWVW 56

Query: 283 LHHPNGTFSAKS 248
           L    G ++++S
Sbjct: 57  LPTETGEYTSRS 68


>dbj|BAI67988.1| hypothetical protein [Oryza sativa Indica Group]
           gi|374277648|gb|AEZ03754.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
           gi|374277660|gb|AEZ03765.1| hypothetical protein
           (mitochondrion) [Oryza sativa Indica Group]
          Length = 317

 Score = 42.4 bits (98), Expect(2) = 1e-08
 Identities = 21/60 (35%), Positives = 35/60 (58%)
 Frame = -2

Query: 427 VSELILKNPNR*DEEKIDQLFNPVDASRIKELYIPFAHEDTIKDKWIWLHHPNGTFSAKS 248
           V++L+L+N N+ D EK+ ++F P+DA+ I  +  P   +D   D W W     G F+ +S
Sbjct: 15  VADLMLQNTNQWDVEKVQRIFFPLDAAAILNMPRPRTEQD---DFWAWAWDRTGIFTVRS 71



 Score = 42.0 bits (97), Expect(2) = 1e-08
 Identities = 19/71 (26%), Positives = 36/71 (50%)
 Frame = -1

Query: 218 SSSINTEDFNWKKLWMIKVLPPKVQMFLWRLLNNGLAVGNRLMKFVKGINADCKFCQQAV 39
           + S   ++  WK LW ++++P K+++F WR++ N L     L +      ++C  C    
Sbjct: 87  TGSSTGDEATWKALWRLRIMP-KIRVFWWRVVKNLLPCAAELRRSHMKEISNCPLCGNDN 145

Query: 38  ETVDHLFLHCQ 6
           ET  H  + C+
Sbjct: 146 ETKFHALVECE 156


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