BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035641
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containi...   342   2e-92
ref|XP_002324029.1| predicted protein [Populus trichocarpa] gi|2...   335   4e-90
ref|XP_002517447.1| pentatricopeptide repeat-containing protein,...   333   1e-89
dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]           330   7e-89
ref|NP_198814.1| pentatricopeptide repeat-containing protein [Ar...   330   7e-89

>ref|XP_002276556.1| PREDICTED: pentatricopeptide repeat-containing protein At5g39980,
           chloroplastic [Vitis vinifera]
           gi|296087770|emb|CBI35026.3| unnamed protein product
           [Vitis vinifera]
          Length = 675

 Score =  342 bits (877), Expect = 2e-92
 Identities = 170/185 (91%), Positives = 177/185 (95%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           ADRLFWSMRKM IEP +VSYNT+LRVYGEAELFGEAIHLFRLMQ KDIEQNVVTYNTMIK
Sbjct: 349 ADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           IYGKSLEHEKATNLVQEMQ RGIEPNA+TYSTIISIW KAGKLDRAA LFQKLR+SG+EI
Sbjct: 409 IYGKSLEHEKATNLVQEMQNRGIEPNAITYSTIISIWDKAGKLDRAAMLFQKLRSSGIEI 468

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAISILVGAGRIEEALWVFRQAF 542
           DQVLYQTMIVAYE+AGLVAHAKRLLHELKRPDNIPRETAI+IL GAGRIEEA WVFRQAF
Sbjct: 469 DQVLYQTMIVAYERAGLVAHAKRLLHELKRPDNIPRETAITILAGAGRIEEATWVFRQAF 528

Query: 543 DAGEV 557
           DAGEV
Sbjct: 529 DAGEV 533



 Score = 89.4 bits (220), Expect = 4e-16
 Identities = 55/179 (30%), Positives = 95/179 (53%), Gaps = 4/179 (2%)
 Frame = +3

Query: 12  LFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYG 191
           L W   + +  PSV +YN ++R    A+ +  A  LF  M+ + +  +  TY+T+I  +G
Sbjct: 142 LDWINEEASYSPSVFAYNVVIRNVLRAKQWELAHGLFEEMRQRALAPDRYTYSTLITHFG 201

Query: 192 KSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQV 371
           K    + A + +Q+M++  +  + V YS +I +  K     +A ++F +L+ SG+  D V
Sbjct: 202 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLV 261

Query: 372 LYQTMIVAYEKAGLVAHAKRLLHELK----RPDNIPRETAISILVGAGRIEEALWVFRQ 536
            Y +MI  + KA L   A+ LL E++     PD +   T +S+ V  G+  EAL VF +
Sbjct: 262 AYNSMINVFGKAKLFREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSE 320



 Score = 81.3 bits (199), Expect = 1e-13
 Identities = 41/148 (27%), Positives = 81/148 (54%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           A  LF  MR+ A+ P   +Y+T++  +G+  +F  A+   + M+   +  ++V Y+ +I+
Sbjct: 174 AHGLFEEMRQRALAPDRYTYSTLITHFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           +  K  ++ KA ++   +++ GI P+ V Y+++I+++GKA     A  L  ++R  GV  
Sbjct: 234 LSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKLFREARLLLPEMRAGGVMP 293

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHEL 446
           D V Y T++  Y + G    A  +  E+
Sbjct: 294 DTVSYSTLLSMYVENGKYVEALSVFSEM 321



 Score = 73.2 bits (178), Expect = 3e-11
 Identities = 43/174 (24%), Positives = 88/174 (50%), Gaps = 4/174 (2%)
 Frame = +3

Query: 24  MRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYGKSLE 203
           M +  +   +V Y+ ++ +  +   + +AI +F  ++   I  ++V YN+MI ++GK+  
Sbjct: 216 MEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFSRLKRSGISPDLVAYNSMINVFGKAKL 275

Query: 204 HEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQVLYQT 383
             +A  L+ EM+  G+ P+ V+YST++S++ + GK   A ++F ++      +D      
Sbjct: 276 FREARLLLPEMRAGGVMPDTVSYSTLLSMYVENGKYVEALSVFSEMNEVRCPLDLTTCNV 335

Query: 384 MIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFR 533
           MI  Y +  +   A RL   +++    P  +   T + +   A    EA+ +FR
Sbjct: 336 MIDVYGQLDMAKEADRLFWSMRKMGIEPGIVSYNTLLRVYGEAELFGEAIHLFR 389


>ref|XP_002324029.1| predicted protein [Populus trichocarpa] gi|222867031|gb|EEF04162.1|
           predicted protein [Populus trichocarpa]
          Length = 629

 Score =  335 bits (858), Expect = 4e-90
 Identities = 166/185 (89%), Positives = 175/185 (94%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           ADRLFWSMRKM IEP+VVSYNT+LRVYGE ELFGEAIHLFRLMQ KDIEQNVVTYNTMIK
Sbjct: 301 ADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFRLMQKKDIEQNVVTYNTMIK 360

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           +YGKSLEHEKATNL+QEMQ RGIEPNA+TYSTIISIWGKAGKLDRAA LFQKLR+SGVEI
Sbjct: 361 VYGKSLEHEKATNLMQEMQNRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 420

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAISILVGAGRIEEALWVFRQAF 542
           DQVLYQTMIVAYE++GLVAHAKRLLHELK PD+IPRETAI IL  AGRIEEA WVFRQAF
Sbjct: 421 DQVLYQTMIVAYERSGLVAHAKRLLHELKHPDSIPRETAIKILARAGRIEEATWVFRQAF 480

Query: 543 DAGEV 557
           DAGEV
Sbjct: 481 DAGEV 485



 Score = 85.1 bits (209), Expect = 7e-15
 Identities = 53/172 (30%), Positives = 93/172 (54%), Gaps = 4/172 (2%)
 Frame = +3

Query: 45  PSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYGKSLEHEKATNL 224
           PSV +YN +LR    A+ +  A  LF  M+++ +  +  TY+T+I  +GK+   + +   
Sbjct: 105 PSVFAYNVVLRNVLRAKQWDHAHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFW 164

Query: 225 VQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQVLYQTMIVAYEK 404
           +Q+M++  +  + V YS +I +  K     +A ++F +L+ SG+  D V Y +MI  + K
Sbjct: 165 LQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGK 224

Query: 405 AGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFRQAFDA 548
           A L   AK L+ E++     PD +   T +S+ V   +  EAL VF +  +A
Sbjct: 225 AKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEA 276



 Score = 78.2 bits (191), Expect = 8e-13
 Identities = 38/132 (28%), Positives = 76/132 (57%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           A  LF  MR  A+ P   +Y+T++  +G+A +F  ++   + M+   +  ++V Y+ +I+
Sbjct: 126 AHGLFDEMRNRALAPDRYTYSTLITHFGKAGMFDASLFWLQQMEQDRVSGDLVLYSNLIE 185

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           +  K  ++ KA ++   +++ GI P+ V Y+++I+++GKA     A  L +++R  GV  
Sbjct: 186 LSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINVFGKAKLFREAKLLMKEMREVGVMP 245

Query: 363 DQVLYQTMIVAY 398
           D V Y T++  Y
Sbjct: 246 DTVSYSTLLSVY 257



 Score = 74.7 bits (182), Expect = 9e-12
 Identities = 44/180 (24%), Positives = 93/180 (51%), Gaps = 6/180 (3%)
 Frame = +3

Query: 12  LFW--SMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKI 185
           LFW   M +  +   +V Y+ ++ +  +   + +AI +F  ++   I  ++V YN+MI +
Sbjct: 162 LFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGIMPDLVAYNSMINV 221

Query: 186 YGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEID 365
           +GK+    +A  L++EM++ G+ P+ V+YST++S++ +  K   A ++F ++  +   +D
Sbjct: 222 FGKAKLFREAKLLMKEMREVGVMPDTVSYSTLLSVYVENEKFVEALSVFAEMNEAKCPLD 281

Query: 366 QVLYQTMIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFR 533
                 MI  Y +  +   A RL   +++    P+ +   T + +        EA+ +FR
Sbjct: 282 LTTCNVMIDVYGQLDMAKEADRLFWSMRKMGIEPNVVSYNTLLRVYGETELFGEAIHLFR 341


>ref|XP_002517447.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223543458|gb|EEF44989.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 654

 Score =  333 bits (853), Expect = 1e-89
 Identities = 167/185 (90%), Positives = 176/185 (95%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           ADRLFWSMRKM IEP+VVSYNT+L+VYGEAELFGEAIHLFRLMQ K+IEQNVVTYNTMIK
Sbjct: 328 ADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQNVVTYNTMIK 387

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           IYGKSLEHEKATNLVQEMQKRGIEPNA+TYSTIISIWGKAGKLDRAA LFQKLR+SGVEI
Sbjct: 388 IYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLFQKLRSSGVEI 447

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAISILVGAGRIEEALWVFRQAF 542
           DQVLYQTMIVAYE+AGLVAHAKRLLH+LK PD IPR+TAI IL  AGRIEEA WVFRQAF
Sbjct: 448 DQVLYQTMIVAYERAGLVAHAKRLLHDLKCPDIIPRDTAIKILARAGRIEEATWVFRQAF 507

Query: 543 DAGEV 557
           DAGEV
Sbjct: 508 DAGEV 512



 Score =  106 bits (265), Expect = 2e-21
 Identities = 64/187 (34%), Positives = 105/187 (56%), Gaps = 4/187 (2%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           A  L   MR++ + P  VSY+T+L VY E E F EA+ +F  M   +   +++T N MI 
Sbjct: 258 ARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCSLDLMTCNIMID 317

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           +YG+    ++A  L   M+K GIEPN V+Y+T++ ++G+A     A  LF+ ++   +E 
Sbjct: 318 VYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHLFRLMQRKEIEQ 377

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVF 530
           + V Y TMI  Y K+     A  L+ E+++    P+ I   T ISI   AG+++ A  +F
Sbjct: 378 NVVTYNTMIKIYGKSLEHEKATNLVQEMQKRGIEPNAITYSTIISIWGKAGKLDRAAMLF 437

Query: 531 RQAFDAG 551
           ++   +G
Sbjct: 438 QKLRSSG 444



 Score = 89.0 bits (219), Expect = 5e-16
 Identities = 55/183 (30%), Positives = 96/183 (52%), Gaps = 4/183 (2%)
 Frame = +3

Query: 12  LFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYG 191
           L W        PSV +YN +LR    A+ +  A  LF  M+ + +  +  TY+T+I  +G
Sbjct: 121 LDWINEVARYSPSVFAYNVVLRNVLRAKKWDLAHGLFDEMRQRALSPDRYTYSTLITSFG 180

Query: 192 KSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQV 371
           K+   +++   +Q+M++  +  + V YS +I +  K     +A ++F +L+ SG+  D V
Sbjct: 181 KAGMFDESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLV 240

Query: 372 LYQTMIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFRQA 539
            Y +MI  + KA L   A+ L+HE++     PD +   T +S+ V   +  EAL VF + 
Sbjct: 241 AYNSMINVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEM 300

Query: 540 FDA 548
            +A
Sbjct: 301 NEA 303



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 39/132 (29%), Positives = 77/132 (58%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           A  LF  MR+ A+ P   +Y+T++  +G+A +F E++   + M+   +  ++V Y+ +I+
Sbjct: 153 AHGLFDEMRQRALSPDRYTYSTLITSFGKAGMFDESLFWLQQMEQDRVSGDLVLYSNLIE 212

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           +  K  ++ KA ++   +++ GI P+ V Y+++I+++GKA     A  L  ++R  GV  
Sbjct: 213 LSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMINVFGKARLFREARMLVHEMREVGVLP 272

Query: 363 DQVLYQTMIVAY 398
           D V Y T++  Y
Sbjct: 273 DTVSYSTLLSVY 284



 Score = 80.9 bits (198), Expect = 1e-13
 Identities = 47/182 (25%), Positives = 96/182 (52%), Gaps = 6/182 (3%)
 Frame = +3

Query: 6   DRLFW--SMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMI 179
           + LFW   M +  +   +V Y+ ++ +  +   + +AI +F  ++   I  ++V YN+MI
Sbjct: 187 ESLFWLQQMEQDRVSGDLVLYSNLIELSRKLCDYSKAISIFMRLKRSGITPDLVAYNSMI 246

Query: 180 KIYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVE 359
            ++GK+    +A  LV EM++ G+ P+ V+YST++S++ +  K   A ++F ++  +   
Sbjct: 247 NVFGKARLFREARMLVHEMREVGVLPDTVSYSTLLSVYVENEKFVEALSVFAEMNEANCS 306

Query: 360 IDQVLYQTMIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWV 527
           +D +    MI  Y +  +V  A RL   +++    P+ +   T + +   A    EA+ +
Sbjct: 307 LDLMTCNIMIDVYGQLDMVKEADRLFWSMRKMGIEPNVVSYNTLLKVYGEAELFGEAIHL 366

Query: 528 FR 533
           FR
Sbjct: 367 FR 368


>dbj|BAE98404.1| hypothetical protein [Arabidopsis thaliana]
          Length = 546

 Score =  330 bits (847), Expect = 7e-89
 Identities = 164/185 (88%), Positives = 175/185 (94%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           ADRLFWS+RKM IEP+VVSYNTILRVYGEAELFGEAIHLFRLMQ KDIEQNVVTYNTMIK
Sbjct: 217 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 276

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           IYGK++EHEKATNLVQEMQ RGIEPNA+TYSTIISIWGKAGKLDRAATLFQKLR+SGVEI
Sbjct: 277 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 336

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAISILVGAGRIEEALWVFRQAF 542
           DQVLYQTMIVAYE+ GL+ HAKRLLHELK PDNIPRETAI+IL  AGR EEA WVFRQAF
Sbjct: 337 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAF 396

Query: 543 DAGEV 557
           ++GEV
Sbjct: 397 ESGEV 401



 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
 Frame = +3

Query: 12  LFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYG 191
           L   M +  + P+ VSY+T+L VY E   F EA+ +F  M+  +   ++ T N MI +YG
Sbjct: 150 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 209

Query: 192 KSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQV 371
           +    ++A  L   ++K  IEPN V+Y+TI+ ++G+A     A  LF+ ++   +E + V
Sbjct: 210 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 269

Query: 372 LYQTMIVAYEKAGLVAHAKRLLHELK----RPDNIPRETAISILVGAGRIEEALWVFRQA 539
            Y TMI  Y K      A  L+ E++     P+ I   T ISI   AG+++ A  +F++ 
Sbjct: 270 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 329

Query: 540 FDAG 551
             +G
Sbjct: 330 RSSG 333



 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
 Frame = +3

Query: 12  LFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYG 191
           L W   +    PSV +YN +LR    A+ F  A  LF  M+ + +  +  TY+T+I  +G
Sbjct: 10  LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 69

Query: 192 KSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQV 371
           K    + A + +Q+M++  +  + V YS +I +  +     +A ++F +L+ SG+  D V
Sbjct: 70  KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 129

Query: 372 LYQTMIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFRQ 536
            Y +MI  Y KA L   A+ L+ E+      P+ +   T +S+ V   +  EAL VF +
Sbjct: 130 AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAE 188



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 46/174 (26%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
 Frame = +3

Query: 24  MRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYGKSLE 203
           M +  +   +V Y+ ++ +      + +AI +F  ++   I  ++V YN+MI +YGK+  
Sbjct: 84  MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 143

Query: 204 HEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQVLYQT 383
             +A  L++EM + G+ PN V+YST++S++ +  K   A ++F +++     +D      
Sbjct: 144 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI 203

Query: 384 MIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFR 533
           MI  Y +  +V  A RL   L++    P+ +   T + +   A    EA+ +FR
Sbjct: 204 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 257



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/164 (24%), Positives = 88/164 (53%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           A  LF  MR+ A+ P   +Y+T++  +G+  +F  A+   + M+   +  ++V Y+ +I+
Sbjct: 42  AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 101

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           +  +  ++ KA ++   +++ GI P+ V Y+++I+++GKA     A  L +++  +GV  
Sbjct: 102 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 161

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAISILV 494
           + V Y T++  Y +      A  +  E+K  +     T  +I++
Sbjct: 162 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 205


>ref|NP_198814.1| pentatricopeptide repeat-containing protein [Arabidopsis thaliana]
           gi|75171449|sp|Q9FLD8.1|PP408_ARATH RecName:
           Full=Pentatricopeptide repeat-containing protein
           At5g39980, chloroplastic; Flags: Precursor
           gi|10176990|dbj|BAB10222.1| unnamed protein product
           [Arabidopsis thaliana] gi|332007115|gb|AED94498.1|
           pentatricopeptide repeat-containing protein [Arabidopsis
           thaliana]
          Length = 678

 Score =  330 bits (847), Expect = 7e-89
 Identities = 164/185 (88%), Positives = 175/185 (94%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           ADRLFWS+RKM IEP+VVSYNTILRVYGEAELFGEAIHLFRLMQ KDIEQNVVTYNTMIK
Sbjct: 349 ADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVVTYNTMIK 408

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           IYGK++EHEKATNLVQEMQ RGIEPNA+TYSTIISIWGKAGKLDRAATLFQKLR+SGVEI
Sbjct: 409 IYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKLRSSGVEI 468

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAISILVGAGRIEEALWVFRQAF 542
           DQVLYQTMIVAYE+ GL+ HAKRLLHELK PDNIPRETAI+IL  AGR EEA WVFRQAF
Sbjct: 469 DQVLYQTMIVAYERVGLMGHAKRLLHELKLPDNIPRETAITILAKAGRTEEATWVFRQAF 528

Query: 543 DAGEV 557
           ++GEV
Sbjct: 529 ESGEV 533



 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 60/184 (32%), Positives = 99/184 (53%), Gaps = 4/184 (2%)
 Frame = +3

Query: 12  LFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYG 191
           L   M +  + P+ VSY+T+L VY E   F EA+ +F  M+  +   ++ T N MI +YG
Sbjct: 282 LIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMIDVYG 341

Query: 192 KSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQV 371
           +    ++A  L   ++K  IEPN V+Y+TI+ ++G+A     A  LF+ ++   +E + V
Sbjct: 342 QLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFRLMQRKDIEQNVV 401

Query: 372 LYQTMIVAYEKAGLVAHAKRLLHELK----RPDNIPRETAISILVGAGRIEEALWVFRQA 539
            Y TMI  Y K      A  L+ E++     P+ I   T ISI   AG+++ A  +F++ 
Sbjct: 402 TYNTMIKIYGKTMEHEKATNLVQEMQSRGIEPNAITYSTIISIWGKAGKLDRAATLFQKL 461

Query: 540 FDAG 551
             +G
Sbjct: 462 RSSG 465



 Score = 85.9 bits (211), Expect = 4e-15
 Identities = 54/179 (30%), Positives = 92/179 (51%), Gaps = 4/179 (2%)
 Frame = +3

Query: 12  LFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYG 191
           L W   +    PSV +YN +LR    A+ F  A  LF  M+ + +  +  TY+T+I  +G
Sbjct: 142 LDWVHEEAKYTPSVFAYNVVLRNVLRAKQFDIAHGLFDEMRQRALAPDRYTYSTLITSFG 201

Query: 192 KSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQV 371
           K    + A + +Q+M++  +  + V YS +I +  +     +A ++F +L+ SG+  D V
Sbjct: 202 KEGMFDSALSWLQKMEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLV 261

Query: 372 LYQTMIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFRQ 536
            Y +MI  Y KA L   A+ L+ E+      P+ +   T +S+ V   +  EAL VF +
Sbjct: 262 AYNSMINVYGKAKLFREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAE 320



 Score = 79.3 bits (194), Expect = 4e-13
 Identities = 46/174 (26%), Positives = 90/174 (51%), Gaps = 4/174 (2%)
 Frame = +3

Query: 24  MRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIKIYGKSLE 203
           M +  +   +V Y+ ++ +      + +AI +F  ++   I  ++V YN+MI +YGK+  
Sbjct: 216 MEQDRVSGDLVLYSNLIELSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKL 275

Query: 204 HEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEIDQVLYQT 383
             +A  L++EM + G+ PN V+YST++S++ +  K   A ++F +++     +D      
Sbjct: 276 FREARLLIKEMNEAGVLPNTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNI 335

Query: 384 MIVAYEKAGLVAHAKRLLHELKR----PDNIPRETAISILVGAGRIEEALWVFR 533
           MI  Y +  +V  A RL   L++    P+ +   T + +   A    EA+ +FR
Sbjct: 336 MIDVYGQLDMVKEADRLFWSLRKMDIEPNVVSYNTILRVYGEAELFGEAIHLFR 389



 Score = 76.6 bits (187), Expect = 2e-12
 Identities = 40/164 (24%), Positives = 88/164 (53%)
 Frame = +3

Query: 3   ADRLFWSMRKMAIEPSVVSYNTILRVYGEAELFGEAIHLFRLMQSKDIEQNVVTYNTMIK 182
           A  LF  MR+ A+ P   +Y+T++  +G+  +F  A+   + M+   +  ++V Y+ +I+
Sbjct: 174 AHGLFDEMRQRALAPDRYTYSTLITSFGKEGMFDSALSWLQKMEQDRVSGDLVLYSNLIE 233

Query: 183 IYGKSLEHEKATNLVQEMQKRGIEPNAVTYSTIISIWGKAGKLDRAATLFQKLRNSGVEI 362
           +  +  ++ KA ++   +++ GI P+ V Y+++I+++GKA     A  L +++  +GV  
Sbjct: 234 LSRRLCDYSKAISIFSRLKRSGITPDLVAYNSMINVYGKAKLFREARLLIKEMNEAGVLP 293

Query: 363 DQVLYQTMIVAYEKAGLVAHAKRLLHELKRPDNIPRETAISILV 494
           + V Y T++  Y +      A  +  E+K  +     T  +I++
Sbjct: 294 NTVSYSTLLSVYVENHKFLEALSVFAEMKEVNCALDLTTCNIMI 337