BLASTX nr result

ID: Papaver23_contig00035560 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035560
         (516 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal doma...    65   7e-09
ref|XP_002870934.1| hypothetical protein ARALYDRAFT_486948 [Arab...    65   7e-09
ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal doma...    64   1e-08
ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal doma...    64   1e-08
ref|NP_001190199.1| RNA polymerase II C-terminal domain phosphat...    64   1e-08

>ref|XP_003542763.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 960

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
 Frame = +2

Query: 266 LAVLSTVARC--IFKLEANSEIWKFV---HETCLMENRGPFMILGDQEFHLVAMKSKAKS 430
           LAVL TV  C   FK+E+ ++    +   H  C+ EN+   M LG +E HLVAM S+   
Sbjct: 55  LAVLHTVTSCGVCFKMESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNDD 114

Query: 431 KICFWGFCAPRGLYKSSFDMLNQQFLHI 514
           + CFWGF    GLY S   MLN + L I
Sbjct: 115 RPCFWGFIVTLGLYDSCLVMLNLRCLGI 142


>ref|XP_002870934.1| hypothetical protein ARALYDRAFT_486948 [Arabidopsis lyrata subsp.
           lyrata] gi|297316771|gb|EFH47193.1| hypothetical protein
           ARALYDRAFT_486948 [Arabidopsis lyrata subsp. lyrata]
          Length = 770

 Score = 64.7 bits (156), Expect = 7e-09
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
 Frame = +2

Query: 266 LAVLSTVA----RCIFKLEANSEI----WKFVHETCLMENRGPFMILGDQEFHLVAMKSK 421
           LA+L T+A    RC  KLE+++ +       +H  C  E +   ++LGD+E HLVAM SK
Sbjct: 53  LAILQTIASFAVRC--KLESSAPVKPQELMHLHAVCFHELKTAVVLLGDEEIHLVAMPSK 110

Query: 422 AKSKICFWGFCAPRGLYKSSFDMLNQQFLHI 514
            K   CFW F  P GLY S   MLN + L I
Sbjct: 111 EKKFPCFWCFSVPSGLYDSCLRMLNTRCLSI 141


>ref|XP_002267987.2| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like 1
           [Vitis vinifera]
          Length = 860

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 40/92 (43%), Positives = 51/92 (55%), Gaps = 9/92 (9%)
 Frame = +2

Query: 266 LAVLSTVARC--IFKLEANSEIWK-----FVHETCLMENRGPFMILGDQEFHLVAMKSKA 424
           LAVL T+  C   FK+E++    +      +H TC+ EN+   M LG++E HLVAM SK 
Sbjct: 46  LAVLHTITSCGVCFKMESSKAQSQDTPLYLLHSTCIRENKTAVMSLGEEELHLVAMYSKK 105

Query: 425 K--SKICFWGFCAPRGLYKSSFDMLNQQFLHI 514
           K     CFWGF    GLY S   MLN + L I
Sbjct: 106 KDGQYPCFWGFNVALGLYSSCLVMLNLRCLGI 137


>ref|XP_003529311.1| PREDICTED: RNA polymerase II C-terminal domain phosphatase-like
           1-like [Glycine max]
          Length = 954

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 38/88 (43%), Positives = 49/88 (55%), Gaps = 5/88 (5%)
 Frame = +2

Query: 266 LAVLSTVARC--IFKLEANSEIWKFV---HETCLMENRGPFMILGDQEFHLVAMKSKAKS 430
           LAVL TV  C   FK+E+ ++    +   H  C+ EN+   M LG +E HLVAM S+   
Sbjct: 49  LAVLHTVTSCGVCFKMESKTQQQDGLFQLHSLCIRENKTAVMPLGGEEIHLVAMHSRNVD 108

Query: 431 KICFWGFCAPRGLYKSSFDMLNQQFLHI 514
           + CFWGF    GLY S   MLN + L I
Sbjct: 109 RPCFWGFIVALGLYDSCLVMLNLRCLGI 136


>ref|NP_001190199.1| RNA polymerase II C-terminal domain phosphatase-like 2 [Arabidopsis
           thaliana] gi|332002938|gb|AED90321.1| RNA polymerase II
           C-terminal domain phosphatase-like 2 [Arabidopsis
           thaliana]
          Length = 774

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 39/91 (42%), Positives = 51/91 (56%), Gaps = 8/91 (8%)
 Frame = +2

Query: 266 LAVLSTVA----RCIFKLEANSEIWK----FVHETCLMENRGPFMILGDQEFHLVAMKSK 421
           LA+L T+A    RC  KLE+++ +       +H  C  E +   ++LGD+E HLVAM SK
Sbjct: 53  LAILQTIASFAVRC--KLESSAPVKSQELMHLHAVCFHELKTAVVMLGDEEIHLVAMPSK 110

Query: 422 AKSKICFWGFCAPRGLYKSSFDMLNQQFLHI 514
            K   CFW F  P GLY S   MLN + L I
Sbjct: 111 EKKFPCFWCFSVPSGLYDSCLRMLNTRCLSI 141


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