BLASTX nr result

ID: Papaver23_contig00035537 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035537
         (488 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002534300.1| Transcription initiation factor IIF subunit ...   219   2e-55
emb|CBI31490.3| unnamed protein product [Vitis vinifera]              218   4e-55
ref|XP_002274802.1| PREDICTED: general transcription factor IIF ...   218   4e-55
ref|XP_003524637.1| PREDICTED: general transcription factor IIF ...   213   1e-53
ref|XP_002315290.1| predicted protein [Populus trichocarpa] gi|2...   213   1e-53

>ref|XP_002534300.1| Transcription initiation factor IIF subunit beta, putative [Ricinus
           communis] gi|223525544|gb|EEF28082.1| Transcription
           initiation factor IIF subunit beta, putative [Ricinus
           communis]
          Length = 278

 Score =  219 bits (558), Expect = 2e-55
 Identities = 103/151 (68%), Positives = 125/151 (82%)
 Frame = -2

Query: 487 EGKVLQKFDMKPHSESIQDYSRLCRERTNKYMVKTRQVKVIENDRGEHMMPKPAMFSHMP 308
           EGK+L KFDM+PH+E++++Y+++CRERT KYM K RQ+++I+ND G HM P P M +   
Sbjct: 130 EGKILYKFDMRPHTENLENYAKMCRERTKKYMTKGRQIQIIDNDNGSHMRPMPLMIAS-G 188

Query: 307 SNPKVKLVPNKVPDGRRSRRDRVEMEGIMFKLFERQPNWTLRQLIQETDQPEQFLKDILK 128
           SN K K  P K  D +R+RRDR EME IMFKLFERQPNWTLRQLIQETDQPEQFLKDILK
Sbjct: 189 SNDKKK-PPAKATDVKRTRRDRGEMEAIMFKLFERQPNWTLRQLIQETDQPEQFLKDILK 247

Query: 127 ELCIYNNRGTNQGSYELKPEYRRSVKEEEPN 35
           ELC+YNN+GTNQGSYELKPEY+RS +E  P+
Sbjct: 248 ELCVYNNKGTNQGSYELKPEYKRSTEESSPS 278


>emb|CBI31490.3| unnamed protein product [Vitis vinifera]
          Length = 300

 Score =  218 bits (555), Expect = 4e-55
 Identities = 102/150 (68%), Positives = 124/150 (82%)
 Frame = -2

Query: 487 EGKVLQKFDMKPHSESIQDYSRLCRERTNKYMVKTRQVKVIENDRGEHMMPKPAMFSHMP 308
           EGK+L KFDMKPH+E+IQ+Y +LCRERT+KYM K+RQ++VI+ND G HM P P M     
Sbjct: 151 EGKILNKFDMKPHNENIQNYGKLCRERTSKYMTKSRQIQVIDNDNGSHMRPMPGMVIASA 210

Query: 307 SNPKVKLVPNKVPDGRRSRRDRVEMEGIMFKLFERQPNWTLRQLIQETDQPEQFLKDILK 128
            + K K+ P K  D +R+RRDR EME I+FKLFERQPNWTLRQLIQETDQPEQFLKD+LK
Sbjct: 211 VSDKKKM-PTKGSDMKRTRRDRGEMEEILFKLFERQPNWTLRQLIQETDQPEQFLKDLLK 269

Query: 127 ELCIYNNRGTNQGSYELKPEYRRSVKEEEP 38
           +LC+YNN+GTNQG+YELKPEY+RS +E  P
Sbjct: 270 DLCVYNNKGTNQGTYELKPEYKRSGEESTP 299


>ref|XP_002274802.1| PREDICTED: general transcription factor IIF subunit 2 [Vitis
           vinifera]
          Length = 257

 Score =  218 bits (555), Expect = 4e-55
 Identities = 102/150 (68%), Positives = 124/150 (82%)
 Frame = -2

Query: 487 EGKVLQKFDMKPHSESIQDYSRLCRERTNKYMVKTRQVKVIENDRGEHMMPKPAMFSHMP 308
           EGK+L KFDMKPH+E+IQ+Y +LCRERT+KYM K+RQ++VI+ND G HM P P M     
Sbjct: 108 EGKILNKFDMKPHNENIQNYGKLCRERTSKYMTKSRQIQVIDNDNGSHMRPMPGMVIASA 167

Query: 307 SNPKVKLVPNKVPDGRRSRRDRVEMEGIMFKLFERQPNWTLRQLIQETDQPEQFLKDILK 128
            + K K+ P K  D +R+RRDR EME I+FKLFERQPNWTLRQLIQETDQPEQFLKD+LK
Sbjct: 168 VSDKKKM-PTKGSDMKRTRRDRGEMEEILFKLFERQPNWTLRQLIQETDQPEQFLKDLLK 226

Query: 127 ELCIYNNRGTNQGSYELKPEYRRSVKEEEP 38
           +LC+YNN+GTNQG+YELKPEY+RS +E  P
Sbjct: 227 DLCVYNNKGTNQGTYELKPEYKRSGEESTP 256


>ref|XP_003524637.1| PREDICTED: general transcription factor IIF subunit 2-like [Glycine
           max]
          Length = 252

 Score =  213 bits (542), Expect = 1e-53
 Identities = 99/145 (68%), Positives = 121/145 (83%), Gaps = 1/145 (0%)
 Frame = -2

Query: 487 EGKVLQKFDMKPHSESIQDYSRLCRERTNKYMVKTRQVKVIENDRGEHMMPKPAMFSHMP 308
           EGK+L KFDM+PH+++++ Y +LCRERTNKYMVK+RQ++VI+ND G HM P P M S   
Sbjct: 106 EGKILNKFDMRPHNQTLELYGKLCRERTNKYMVKSRQIQVIDNDSGAHMRPMPGMISFST 165

Query: 307 SNP-KVKLVPNKVPDGRRSRRDRVEMEGIMFKLFERQPNWTLRQLIQETDQPEQFLKDIL 131
           S P + K  P K  D +R+RRDR EME I+FKLFERQPNW+LR LIQETDQPEQFLKDIL
Sbjct: 166 SGPSEKKKSPAKATDTKRTRRDRGEMEEIVFKLFERQPNWSLRNLIQETDQPEQFLKDIL 225

Query: 130 KELCIYNNRGTNQGSYELKPEYRRS 56
           K+LC+YNN+GTNQG+YELKPEYR+S
Sbjct: 226 KDLCVYNNKGTNQGTYELKPEYRKS 250


>ref|XP_002315290.1| predicted protein [Populus trichocarpa] gi|222864330|gb|EEF01461.1|
           predicted protein [Populus trichocarpa]
          Length = 266

 Score =  213 bits (542), Expect = 1e-53
 Identities = 96/150 (64%), Positives = 125/150 (83%)
 Frame = -2

Query: 487 EGKVLQKFDMKPHSESIQDYSRLCRERTNKYMVKTRQVKVIENDRGEHMMPKPAMFSHMP 308
           EG++L KFD++PHSE++++Y ++CRERT KYMVK+RQ+KVI+ND G HMMP P M   + 
Sbjct: 118 EGRILNKFDVRPHSENLENYRKICRERTKKYMVKSRQIKVIDNDTGSHMMPMPGMI--IS 175

Query: 307 SNPKVKLVPNKVPDGRRSRRDRVEMEGIMFKLFERQPNWTLRQLIQETDQPEQFLKDILK 128
                K +P K  D +R+RRDR EMEGIMFKLFE+QPNWTL+QL+QETDQPEQF+KD+LK
Sbjct: 176 GLADKKKLPIKASDMKRTRRDRREMEGIMFKLFEKQPNWTLKQLVQETDQPEQFVKDMLK 235

Query: 127 ELCIYNNRGTNQGSYELKPEYRRSVKEEEP 38
           +LC+YNN+G+NQGSYELKPEY++S +E  P
Sbjct: 236 DLCVYNNKGSNQGSYELKPEYKKSNEEPAP 265


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