BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035530
         (467 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medica...    72   6e-11
gb|ABN08796.1| Ribonuclease H [Medicago truncatula]                    72   6e-11
gb|ABD28730.1| Ribonuclease H [Medicago truncatula]                    68   9e-10
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    63   2e-08
ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|2...    62   5e-08

>ref|XP_003621690.1| Cytochrome c biogenesis protein ccsA [Medicago truncatula]
           gi|355496705|gb|AES77908.1| Cytochrome c biogenesis
           protein ccsA [Medicago truncatula]
          Length = 666

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
 Frame = +3

Query: 3   SQDDLRVLNFFGVTHRKVKDSDPKPYFWEPPRRNELMLCCDGDARVNPGRAGVGVVVREN 182
           +  D +V   F +  +  + +      W+PP  + + + CDG +        +G+V+R++
Sbjct: 189 AMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDS 248

Query: 183 NTNVLGALTVGLVIQTNFLAEIYCVILGLEWAIKFGVADICIHTDSMSAILVYSSNNMAV 362
           N + LGA++  +   T   AE    ++ +E A +  +  +C+ TDS+  +  + +  + V
Sbjct: 249 NHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAF-NKGLGV 307

Query: 363 PWFMRSRWVVVKARYNSI--RFVHTYREANFSADIMA 467
           PW MR+RW       +SI    VH  RE N  AD +A
Sbjct: 308 PWQMRARWQNCWDFCDSISCSCVHILREGNMVADALA 344


>gb|ABN08796.1| Ribonuclease H [Medicago truncatula]
          Length = 221

 Score = 71.6 bits (174), Expect = 6e-11
 Identities = 42/157 (26%), Positives = 77/157 (49%), Gaps = 2/157 (1%)
 Frame = +3

Query: 3   SQDDLRVLNFFGVTHRKVKDSDPKPYFWEPPRRNELMLCCDGDARVNPGRAGVGVVVREN 182
           +  D +V   F +  +  + +      W+PP  + + + CDG +        +G+V+R++
Sbjct: 26  AMQDYKVAKLFNIPFKVKRVTPHLDIIWKPPIGDIVKINCDGSSVGRHPCGSIGIVIRDS 85

Query: 183 NTNVLGALTVGLVIQTNFLAEIYCVILGLEWAIKFGVADICIHTDSMSAILVYSSNNMAV 362
           N + LGA++  +   T   AE    ++ +E A +  +  +C+ TDS+  +  + +  + V
Sbjct: 86  NHHFLGAISSNIGNATPLEAEFCAGMMAMEKAQEMQLMHVCLETDSLKVVNAF-NKGLGV 144

Query: 363 PWFMRSRWVVVKARYNSI--RFVHTYREANFSADIMA 467
           PW MR+RW       +SI    VH  RE N  AD +A
Sbjct: 145 PWQMRARWQNCWDFCDSISCSCVHILREGNMVADALA 181


>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
          Length = 409

 Score = 67.8 bits (164), Expect = 9e-10
 Identities = 44/157 (28%), Positives = 68/157 (43%), Gaps = 2/157 (1%)
 Frame = +3

Query: 3   SQDDLRVLNFFGVTHRKVKDSDPKPYFWEPPRRNELMLCCDGDARVNPGRAGVGVVVREN 182
           S  D ++   F +  +  + +  +   W PP    + + CDG    +P    +GV+ R +
Sbjct: 218 SMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFRAS 277

Query: 183 NTNVLGALTVGLVIQTNFLAEIYCVILGLEWAIKFGVADICIHTDSMSAILVYSSNNMAV 362
            T   GA    +   T   AE    +  +E A +  + +I I TDS++ I  +  N   V
Sbjct: 278 QTMFCGAFAQNIGYATALEAEYSACMFAIEKAKELHLTNIWIETDSVNVIRAFHFNT-GV 336

Query: 363 PWFMRSRWVVVKARYNSIRFV--HTYREANFSADIMA 467
           PW M  RW        SIR +  H  RE N  AD +A
Sbjct: 337 PWKMHIRWHNCLLFCRSIRSLCTHVNREGNLVADALA 373


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 63.2 bits (152), Expect = 2e-08
 Identities = 45/152 (29%), Positives = 75/152 (49%)
 Frame = +3

Query: 12   DLRVLNFFGVTHRKVKDSDPKPYFWEPPRRNELMLCCDGDARVNPGRAGVGVVVRENNTN 191
            D  +L  F V+ R  K  D     W+ P    L +  DG   V  G A  G + R+++ +
Sbjct: 991  DSAILEEFSVSPRHRKYKDIILVLWKNPSPPLLKVNTDGS--VVGGLAACGGLFRDSSGS 1048

Query: 192  VLGALTVGLVIQTNFLAEIYCVILGLEWAIKFGVADICIHTDSMSAILVYSSNNMAVPWF 371
             LGA +  + + + F AE    IL LE A   G  ++ + +DS SA++++S++++ V W 
Sbjct: 1049 FLGAFSCNIGLASVFHAETLAFILALEHAAHHGWRNLWLESDSTSALMIFSNSSL-VQWL 1107

Query: 372  MRSRWVVVKARYNSIRFVHTYREANFSADIMA 467
            +R+RW   +     +   H   E N  AD +A
Sbjct: 1108 LRNRWHNAQRLGIQVISSHILHEGNRCADNLA 1139


>ref|XP_002337484.1| predicted protein [Populus trichocarpa] gi|222839453|gb|EEE77790.1|
           predicted protein [Populus trichocarpa]
          Length = 228

 Score = 62.0 bits (149), Expect = 5e-08
 Identities = 42/134 (31%), Positives = 70/134 (52%), Gaps = 6/134 (4%)
 Frame = +3

Query: 84  WEPPRRNELMLCCDGDARVNPGRAGVGVVVRENNTNVLGALTVGLVIQTNFLAEIYCVIL 263
           W PP  N L    DG +   PG +G+G V+R ++ ++LG  +V + I  + +AE+  ++ 
Sbjct: 82  WSPPMINSLKWNVDGSSLGKPGPSGIGGVLRNHHGHLLGIFSVPVGILDSNIAELRAIVK 141

Query: 264 GLEWAIK---FGVADICIHTDSMSAILVYSSNNMAVPWFMRSRWVVV---KARYNSIRFV 425
            +E +     F    + I +DS++AI  + +     PW   + +  V   KA + SI F 
Sbjct: 142 AIELSASNCLFHHQHLIIESDSVNAI-SWMNKPHNRPWKHHNLFSSVNRLKAYFGSITFS 200

Query: 426 HTYREANFSADIMA 467
           H +RE+N  AD MA
Sbjct: 201 HIFRESNCMADCMA 214