BLASTX nr result

ID: Papaver23_contig00035506 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035506
         (465 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CBI19389.3| unnamed protein product [Vitis vinifera]              100   2e-19
ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containi...   100   2e-19
ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|2...    97   2e-18
ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containi...    94   2e-17
ref|XP_002534359.1| pentatricopeptide repeat-containing protein,...    92   4e-17

>emb|CBI19389.3| unnamed protein product [Vitis vinifera]
          Length = 365

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/68 (69%), Positives = 58/68 (85%)
 Frame = +1

Query: 1   ATEIMFDMFKNSMVPDLLTYKTLLEGICREGKEDEAFELLEEVRKKQGAMGDRTYKNLLN 180
           AT+I+FDM  NSM PDLLTYKTLLEG+ REGK ++AFELLE++RKK   MG++TYK L+ 
Sbjct: 298 ATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLEDLRKKDAWMGEKTYKTLVK 357

Query: 181 GLHFVSQE 204
           GLHF+SQE
Sbjct: 358 GLHFLSQE 365


>ref|XP_002283378.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Vitis vinifera]
          Length = 393

 Score =  100 bits (248), Expect = 2e-19
 Identities = 47/68 (69%), Positives = 58/68 (85%)
 Frame = +1

Query: 1   ATEIMFDMFKNSMVPDLLTYKTLLEGICREGKEDEAFELLEEVRKKQGAMGDRTYKNLLN 180
           AT+I+FDM  NSM PDLLTYKTLLEG+ REGK ++AFELLE++RKK   MG++TYK L+ 
Sbjct: 326 ATKILFDMLGNSMAPDLLTYKTLLEGLSREGKCNDAFELLEDLRKKDAWMGEKTYKTLVK 385

Query: 181 GLHFVSQE 204
           GLHF+SQE
Sbjct: 386 GLHFLSQE 393


>ref|XP_002301807.1| predicted protein [Populus trichocarpa] gi|222843533|gb|EEE81080.1|
           predicted protein [Populus trichocarpa]
          Length = 325

 Score = 96.7 bits (239), Expect = 2e-18
 Identities = 45/67 (67%), Positives = 56/67 (83%)
 Frame = +1

Query: 1   ATEIMFDMFKNSMVPDLLTYKTLLEGICREGKEDEAFELLEEVRKKQGAMGDRTYKNLLN 180
           A  ++FDM  +SM PDLLTY+T+LEG+CREG  D+AFELLEE RKK G MG++ YK+LLN
Sbjct: 259 AIGVVFDMLGDSMSPDLLTYRTVLEGLCREGMVDKAFELLEEWRKKDGFMGEKNYKSLLN 318

Query: 181 GLHFVSQ 201
           GLHFVS+
Sbjct: 319 GLHFVSR 325


>ref|XP_004144398.1| PREDICTED: pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
           gi|449516331|ref|XP_004165200.1| PREDICTED:
           pentatricopeptide repeat-containing protein At3g25210,
           mitochondrial-like [Cucumis sativus]
          Length = 393

 Score = 93.6 bits (231), Expect = 2e-17
 Identities = 42/68 (61%), Positives = 55/68 (80%)
 Frame = +1

Query: 1   ATEIMFDMFKNSMVPDLLTYKTLLEGICREGKEDEAFELLEEVRKKQGAMGDRTYKNLLN 180
           A EI FDM  NSM PDLLTY+TLLEG+CREG++ EAF+LL+E+RK+   M ++T+K LLN
Sbjct: 326 AIEICFDMLCNSMAPDLLTYRTLLEGLCREGRDSEAFDLLDELRKRDKLMNEKTFKTLLN 385

Query: 181 GLHFVSQE 204
           GLH V ++
Sbjct: 386 GLHTVGRD 393


>ref|XP_002534359.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223525434|gb|EEF28024.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 382

 Score = 92.0 bits (227), Expect = 4e-17
 Identities = 42/68 (61%), Positives = 54/68 (79%)
 Frame = +1

Query: 1   ATEIMFDMFKNSMVPDLLTYKTLLEGICREGKEDEAFELLEEVRKKQGAMGDRTYKNLLN 180
           A +++FDM  NSM PD LTY+T+LEG+CREGK DEAFELLEE RK+  +M  +TYK LLN
Sbjct: 315 AIDVVFDMLANSMSPDFLTYRTVLEGLCREGKTDEAFELLEEFRKRDMSMSQKTYKILLN 374

Query: 181 GLHFVSQE 204
            L FV+++
Sbjct: 375 ALQFVNRD 382


Top