BLASTX nr result

ID: Papaver23_contig00035475 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035475
         (557 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   230   1e-58
ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-...   227   8e-58
ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ric...   216   3e-54
ref|NP_568435.2| transducin/WD40 domain-containing protein [Arab...   213   1e-53
gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|5025357...   213   1e-53

>ref|XP_002267709.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 383

 Score =  230 bits (586), Expect = 1e-58
 Identities = 107/165 (64%), Positives = 127/165 (76%)
 Frame = -2

Query: 556 PFGSGLIAMGCADRNAYTYDIRKTDNPVSVFVGHEKTVSYVRFLGEHMMVTAGTDGCLKL 377
           PFG  LIA+GCADR AY YD+RK  +PV +F GH+KTV+YVRFL +H MVT+GTDGCL+L
Sbjct: 218 PFGGPLIAVGCADRRAYGYDVRKMVDPVLIFDGHQKTVTYVRFLDQHTMVTSGTDGCLRL 277

Query: 376 WNTVNAHSMRTFKGHVNNRSFVGLSVWRHGGLIGCGSESNEVFVYDKRWSEPIWLGGLEG 197
           W+  +A  +R + GH+N RSFVGLSVWR GGL+GCGSE+N VFVYDKRW EPIW+     
Sbjct: 278 WSMHDARMIRVYMGHMNTRSFVGLSVWRTGGLLGCGSENNHVFVYDKRWGEPIWVHEFGV 337

Query: 196 TLGPESEDKFVSGVCWRQVMEDDGCTLVAGGSDGALQVYVGKKKA 62
                 +  FVS VCWRQV  +DGCTLVAGGSDG L+V VGKKKA
Sbjct: 338 GSRDGRDPNFVSSVCWRQVGGEDGCTLVAGGSDGILEVIVGKKKA 382


>ref|XP_002267663.1| PREDICTED: E3 ubiquitin-protein ligase COP1-like [Vitis vinifera]
          Length = 382

 Score =  227 bits (579), Expect = 8e-58
 Identities = 106/165 (64%), Positives = 130/165 (78%)
 Frame = -2

Query: 556 PFGSGLIAMGCADRNAYTYDIRKTDNPVSVFVGHEKTVSYVRFLGEHMMVTAGTDGCLKL 377
           PFG  L+A+GCADR AY YD+RK  +PV +F GH+K V+YVRFL EHMMVT+GTDGCL+L
Sbjct: 218 PFGGPLVAVGCADRRAYGYDVRKMVDPVLIFDGHQKPVTYVRFLDEHMMVTSGTDGCLRL 277

Query: 376 WNTVNAHSMRTFKGHVNNRSFVGLSVWRHGGLIGCGSESNEVFVYDKRWSEPIWLGGLEG 197
           W+  +A  +R + GH+N R+FVGLSVWR GGL+GCGSE+N VFVYDKRWSEPIW+    G
Sbjct: 278 WSMHDARMIRVYMGHMNTRNFVGLSVWRTGGLLGCGSENNHVFVYDKRWSEPIWVHEFGG 337

Query: 196 TLGPESEDKFVSGVCWRQVMEDDGCTLVAGGSDGALQVYVGKKKA 62
                 + KFVS VCWRQV + D CTLVAGGSDG+LQV +GK++A
Sbjct: 338 GSRDGCDPKFVSSVCWRQVGK-DVCTLVAGGSDGSLQVILGKRRA 381


>ref|XP_002528808.1| ubiquitin ligase protein cop1, putative [Ricinus communis]
           gi|223531761|gb|EEF33581.1| ubiquitin ligase protein
           cop1, putative [Ricinus communis]
          Length = 426

 Score =  216 bits (549), Expect = 3e-54
 Identities = 100/164 (60%), Positives = 125/164 (76%)
 Frame = -2

Query: 556 PFGSGLIAMGCADRNAYTYDIRKTDNPVSVFVGHEKTVSYVRFLGEHMMVTAGTDGCLKL 377
           PFG  +IA+GCADR  Y YD+R   NPV V  GH+KTV+YVRF+    + +AG DGCLKL
Sbjct: 262 PFGGSIIAVGCADRRVYGYDVRMITNPVFVLDGHKKTVTYVRFMDNGTLASAGIDGCLKL 321

Query: 376 WNTVNAHSMRTFKGHVNNRSFVGLSVWRHGGLIGCGSESNEVFVYDKRWSEPIWLGGLEG 197
           WN  ++  +RT+KGH+N+R+FVGLSVWR+GGL+GCGSE+N+VFVYDKRWSEPIW  G   
Sbjct: 322 WNLQDSQLLRTYKGHLNSRNFVGLSVWRNGGLLGCGSENNQVFVYDKRWSEPIWAYG--- 378

Query: 196 TLGPESEDKFVSGVCWRQVMEDDGCTLVAGGSDGALQVYVGKKK 65
             GP ++  FV+ VCW QV E D CTLV GGS+G LQV+ GK+K
Sbjct: 379 -SGPAADHGFVNSVCWSQVGE-DRCTLVTGGSNGVLQVFEGKRK 420


>ref|NP_568435.2| transducin/WD40 domain-containing protein [Arabidopsis thaliana]
           gi|10176840|dbj|BAB10046.1| unnamed protein product
           [Arabidopsis thaliana] gi|332005822|gb|AED93205.1|
           transducin/WD40 domain-containing protein [Arabidopsis
           thaliana]
          Length = 368

 Score =  213 bits (543), Expect = 1e-53
 Identities = 101/165 (61%), Positives = 121/165 (73%), Gaps = 1/165 (0%)
 Frame = -2

Query: 556 PFGSGLIAMGCADRNAYTYDIRKTDNPVSVFVGHEKTVSYVRFLGEHMMVTAGTDGCLKL 377
           P G   +A+GCADR  Y YDIRK  +P     GH KTVSYVRFL    +VTAGTDGCLKL
Sbjct: 204 PSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKL 263

Query: 376 WNTVNAHSMRTFKGHVNNRSFVGLSVWRHGGLIGCGSESNEVFVYDKRWSEPIWLGGLEG 197
           W+  +   +RT++GHVNNR+FVGLSVWR+G L GCGSE+N VFVYD+RW +P+W+ G E 
Sbjct: 264 WSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEP 323

Query: 196 T-LGPESEDKFVSGVCWRQVMEDDGCTLVAGGSDGALQVYVGKKK 65
             +   S+ +FVS VCWRQ   D  CTLVAGGSDG LQVYVGK+K
Sbjct: 324 VGMNSGSDKRFVSSVCWRQSGVDQ-CTLVAGGSDGVLQVYVGKRK 367


>gb|AAK64045.1| unknown protein [Arabidopsis thaliana] gi|50253578|gb|AAT71991.1|
           At5g23730 [Arabidopsis thaliana]
          Length = 243

 Score =  213 bits (543), Expect = 1e-53
 Identities = 101/165 (61%), Positives = 121/165 (73%), Gaps = 1/165 (0%)
 Frame = -2

Query: 556 PFGSGLIAMGCADRNAYTYDIRKTDNPVSVFVGHEKTVSYVRFLGEHMMVTAGTDGCLKL 377
           P G   +A+GCADR  Y YDIRK  +P     GH KTVSYVRFL    +VTAGTDGCLKL
Sbjct: 79  PSGGPAVAVGCADRKGYVYDIRKLVDPALTLQGHTKTVSYVRFLDGGTVVTAGTDGCLKL 138

Query: 376 WNTVNAHSMRTFKGHVNNRSFVGLSVWRHGGLIGCGSESNEVFVYDKRWSEPIWLGGLEG 197
           W+  +   +RT++GHVNNR+FVGLSVWR+G L GCGSE+N VFVYD+RW +P+W+ G E 
Sbjct: 139 WSVEDGRVIRTYEGHVNNRNFVGLSVWRNGALFGCGSENNRVFVYDRRWGKPVWVDGFEP 198

Query: 196 T-LGPESEDKFVSGVCWRQVMEDDGCTLVAGGSDGALQVYVGKKK 65
             +   S+ +FVS VCWRQ   D  CTLVAGGSDG LQVYVGK+K
Sbjct: 199 VGMNSGSDKRFVSSVCWRQSGVDQ-CTLVAGGSDGVLQVYVGKRK 242


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