BLASTX nr result

ID: Papaver23_contig00035459 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035459
         (433 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003610566.1| Pentatricopeptide repeat-containing protein ...    88   8e-16
ref|XP_003593079.1| Pentatricopeptide repeat-containing protein ...    83   2e-14
ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat...    78   7e-13
ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat...    71   8e-11
ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat...    71   8e-11

>ref|XP_003610566.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355511621|gb|AES92763.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 598

 Score = 87.8 bits (216), Expect = 8e-16
 Identities = 40/66 (60%), Positives = 50/66 (75%)
 Frame = +1

Query: 1   VLASGFTFSSVLNACARIPAVREGKMIHARVVESGFLGSKVIGTTLVDMYGKCGGSIDGN 180
           +L SGFTFSSVLNAC R+PAV EGK +HAR+V+SGFLG+K++ T L+DMY KCG   D  
Sbjct: 111 ILPSGFTFSSVLNACGRVPAVFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGYVCDAR 170

Query: 181 GNDDAL 198
              D +
Sbjct: 171 DVFDGM 176


>ref|XP_003593079.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|124360447|gb|ABN08457.1| Tetratricopeptide-like
           helical [Medicago truncatula]
           gi|355482127|gb|AES63330.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 558

 Score = 83.2 bits (204), Expect = 2e-14
 Identities = 38/66 (57%), Positives = 48/66 (72%)
 Frame = +1

Query: 1   VLASGFTFSSVLNACARIPAVREGKMIHARVVESGFLGSKVIGTTLVDMYGKCGGSIDGN 180
           +L SGFTFS VLNAC R+PA  EGK +HAR+V+SGFLG+K++ T L+DMY KCG   D  
Sbjct: 111 ILPSGFTFSLVLNACGRVPAGFEGKQVHARLVQSGFLGNKIVQTALLDMYAKCGHVCDAR 170

Query: 181 GNDDAL 198
              D +
Sbjct: 171 DVFDGI 176


>ref|XP_003518279.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Glycine max]
          Length = 552

 Score = 78.2 bits (191), Expect = 7e-13
 Identities = 38/68 (55%), Positives = 50/68 (73%), Gaps = 4/68 (5%)
 Frame = +1

Query: 1   VLASGFTFSSVLNACARIPAVREGKMIHARVVESGFLGSKVIGTTLVDMYGKCGGSIDG- 177
           VL SGFTFSS+L+AC R+PA+ EGK +HARV++SGF G+K++ T L+DMY K G   D  
Sbjct: 108 VLPSGFTFSSILSACGRVPALFEGKQVHARVMQSGFHGNKIVQTALLDMYAKSGCISDAR 167

Query: 178 ---NGNDD 192
              +G DD
Sbjct: 168 AVFDGMDD 175


>ref|XP_004165422.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 427

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/58 (55%), Positives = 46/58 (79%)
 Frame = +1

Query: 1   VLASGFTFSSVLNACARIPAVREGKMIHARVVESGFLGSKVIGTTLVDMYGKCGGSID 174
           +L S FTFSSVL+A AR+PA+  G+ +HARV++ GFL +K++ T+L+DMY KCG  +D
Sbjct: 12  ILESEFTFSSVLSASARMPALYLGRQVHARVIQLGFLSNKIVLTSLMDMYAKCGFILD 69


>ref|XP_004141212.1| PREDICTED: putative pentatricopeptide repeat-containing protein
           At5g37570-like [Cucumis sativus]
          Length = 456

 Score = 71.2 bits (173), Expect = 8e-11
 Identities = 32/58 (55%), Positives = 46/58 (79%)
 Frame = +1

Query: 1   VLASGFTFSSVLNACARIPAVREGKMIHARVVESGFLGSKVIGTTLVDMYGKCGGSID 174
           +L S FTFSSVL+A AR+PA+  G+ +HARV++ GFL +K++ T+L+DMY KCG  +D
Sbjct: 12  ILESEFTFSSVLSASARMPALYLGRQVHARVIQLGFLSNKIVLTSLMDMYAKCGFILD 69


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