BLASTX nr result

ID: Papaver23_contig00035429 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035429
         (476 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_003599217.1| F-box protein [Medicago truncatula] gi|35548...    64   1e-08
emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]    64   1e-08
emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]    61   1e-07
ref|XP_003637302.1| F-box protein [Medicago truncatula] gi|35550...    59   5e-07
ref|XP_003636962.1| F-box protein [Medicago truncatula] gi|35550...    59   5e-07

>ref|XP_003599217.1| F-box protein [Medicago truncatula] gi|355488265|gb|AES69468.1|
           F-box protein [Medicago truncatula]
          Length = 301

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 35/116 (30%), Positives = 64/116 (55%), Gaps = 3/116 (2%)
 Frame = -3

Query: 393 NGLVCFTSTTRPYFGVRIYNLSTRELSPWIRTTFPR--NVCYLPTYHFGFDPVTKEHKVI 220
           NG++CFT     +F + ++N S R  + +    +P   N     T+ FG+ P T  +K++
Sbjct: 48  NGILCFT--IEDHFPL-LWNPSIRRFNTFPPLKYPGKGNTFLASTFSFGYSPSTHNYKIV 104

Query: 219 CIWDYKQNDCAWYHGCLVMTVGANTWRVIDEVPQRYL-ERPAVFVNGSVHWMAYDL 55
            +  +K       +   V T+G NTWR I + P  ++ + P VFV+G+++W++YD+
Sbjct: 105 AVSFFKNQ-----YRVSVYTLGTNTWRRIQDFPYSHISDNPGVFVSGTINWLSYDI 155


>emb|CAN60954.1| hypothetical protein VITISV_008876 [Vitis vinifera]
          Length = 862

 Score = 64.3 bits (155), Expect = 1e-08
 Identities = 44/147 (29%), Positives = 74/147 (50%), Gaps = 12/147 (8%)
 Frame = -3

Query: 405 SKPVNGLVCF-----TSTTRPYFGVRIYNLSTRELSPWIRTTFPR-NVCYLPTY-HFGFD 247
           S+ VNGL+C       S  +  F V + N STRE      T F   ++C+   +   GFD
Sbjct: 565 SQSVNGLICLYEQHDRSFPKLSFRVTLCNPSTRERVTLPPTRFSNPDLCFDHQHISLGFD 624

Query: 246 PVTKEHKVICIWDYKQNDCAWYHGCLVMTVGANTWRVIDEVPQRYLERPAVFVNGSVHW- 70
           P TK +K++ +W  + N       C ++T+G   WR+I +  +  LE   + +NG+++W 
Sbjct: 625 PSTKTYKILKVWFERFNSIM----CEILTLGXRAWRIIKDGLEYTLEAKGICLNGTIYWA 680

Query: 69  ----MAYDLFHGHIRKLIIVAFHVGSE 1
               ++ D  H  + +  ++AF VG E
Sbjct: 681 DARHISEDYPHFVVMQNRVIAFDVGEE 707


>emb|CAN60955.1| hypothetical protein VITISV_008877 [Vitis vinifera]
          Length = 289

 Score = 60.8 bits (146), Expect = 1e-07
 Identities = 47/152 (30%), Positives = 76/152 (50%), Gaps = 17/152 (11%)
 Frame = -3

Query: 405 SKPVNGLVCF-----TSTTRPYFGVRIYNLSTRELSPWIRTTFPR---NVCYLPTYHFGF 250
           S+ VNGL+C       S+ +  F V + N ST E      T F +   + C+      GF
Sbjct: 105 SQSVNGLICIYEQLVPSSPKLSFRVIVCNPSTGERVTLPPTHFSKADFSFCH-QNISLGF 163

Query: 249 DPVTKEHKVICIWDYKQNDCAW--YHGCL--VMTVGANTWRVIDEVPQRYLERPAVFVNG 82
           DP TK +K++  W        W  Y G +  + T+G++ WR+I + P+  LE   + +NG
Sbjct: 164 DPSTKTYKILRAW--------WGRYGGPIHEIFTLGSHAWRIIKDDPEYALETKGICLNG 215

Query: 81  SVHWMA-YDLFHGH----IRKLIIVAFHVGSE 1
           +++W A +DL   +    + K  ++AF VG E
Sbjct: 216 TIYWAATFDLSKDNSSFVVMKNRVIAFDVGEE 247


>ref|XP_003637302.1| F-box protein [Medicago truncatula] gi|355503237|gb|AES84440.1|
           F-box protein [Medicago truncatula]
          Length = 418

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
 Frame = -3

Query: 393 NGLVCFTSTTRPYFGVRIYNLSTRELSPWIRTTFPRNVCYLPTYHFGFDPVTKEHKVICI 214
           +GL+CF    R      +YN   R++        PR V     Y FG+DP    +KV+ +
Sbjct: 180 DGLLCFAINQRLAV---LYNPCIRKIKKLPFIDLPR-VQGSTVYAFGYDPFIDNYKVVAV 235

Query: 213 WDYKQNDCAWYHGCLVMTVGANTWRVIDEVPQRY-LERPAVFVNGSVHWMAYDLFHGHIR 37
           +      C+++        G N+WR I + P    LER  +FV+G+V+W+ Y   +G   
Sbjct: 236 F------CSYF--------GTNSWRRIKDFPSNVRLERHGIFVSGTVNWLTYCYLNGFNG 281

Query: 36  KLIIVAFHVGSE 1
              IV+ H+G E
Sbjct: 282 LRSIVSLHLGKE 293


>ref|XP_003636962.1| F-box protein [Medicago truncatula] gi|355502897|gb|AES84100.1|
           F-box protein [Medicago truncatula]
          Length = 446

 Score = 58.5 bits (140), Expect = 5e-07
 Identities = 40/132 (30%), Positives = 63/132 (47%), Gaps = 1/132 (0%)
 Frame = -3

Query: 393 NGLVCFTSTTRPYFGVRIYNLSTRELSPWIRTTFPRNVCYLPTYHFGFDPVTKEHKVICI 214
           +GL+CF    R      +YN   R++        PR V     Y FG+DP    +KV+ +
Sbjct: 208 DGLLCFAINQRLAV---LYNPCIRKIKKLPFIDLPR-VQGSTVYAFGYDPFIDNYKVVAV 263

Query: 213 WDYKQNDCAWYHGCLVMTVGANTWRVIDEVPQRY-LERPAVFVNGSVHWMAYDLFHGHIR 37
           +      C+++        G N+WR I + P    LER  +FV+G+V+W+ Y   +G   
Sbjct: 264 F------CSYF--------GTNSWRRIKDFPSNVRLERHGIFVSGTVNWLTYCYLNGFNG 309

Query: 36  KLIIVAFHVGSE 1
              IV+ H+G E
Sbjct: 310 LRSIVSLHLGKE 321


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