BLASTX nr result

ID: Papaver23_contig00035423 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035423
         (584 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containi...   217   1e-54
ref|XP_002516618.1| pentatricopeptide repeat-containing protein,...   209   3e-52
ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|2...   206   2e-51
ref|XP_003588687.1| Pentatricopeptide repeat-containing protein ...   204   9e-51
ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containi...   184   9e-45

>ref|XP_002282419.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial [Vitis vinifera]
           gi|296081989|emb|CBI20994.3| unnamed protein product
           [Vitis vinifera]
          Length = 597

 Score =  217 bits (552), Expect = 1e-54
 Identities = 119/226 (52%), Positives = 141/226 (62%), Gaps = 40/226 (17%)
 Frame = -1

Query: 563 LSPEKTLETALDETGIKPDSTLLQTILPHFDSSPEPFLSLYKWAVKQPSFDPDI------ 402
           LS    LE AL+ TGIKP S LLQ I  HFD+SP+P  +L++WA+KQP F+  +      
Sbjct: 84  LSSGAPLEDALNRTGIKPCSGLLQAIFSHFDASPKPLFTLFRWAMKQPGFESSMTLFNSM 143

Query: 401 ----------------------------------FAVLLNRYTSAGMTSSAIRTFEIANE 324
                                             FAVL+ RY  AGMT SAIRTFE A  
Sbjct: 144 IDVLAKSRAFDSAWLLVLDRIEGGEEPELVSSNTFAVLIRRYARAGMTLSAIRTFEFAFS 203

Query: 323 LDSSHYTFSISSLFETLMDSLCKEGHVRVASEYCVKRRELEPGWVPSVGVYNVLLEGWFR 144
           LDS     S  SLF+ L+DSLCKEGHVRVASEY  ++R L+P WVPS+ VYNVLL GWFR
Sbjct: 204 LDSIRDRDSEWSLFKILLDSLCKEGHVRVASEYFDQQRGLDPSWVPSIRVYNVLLNGWFR 263

Query: 143 LGKLKQAEKLWEDMKTENVAPDVVTYGTLVEGYCKLRRVERAMELV 6
             KLK+AE+LW  MK ENV P VVTYGTLVEGYC++RR E+A+ELV
Sbjct: 264 SRKLKRAEQLWRTMKRENVKPTVVTYGTLVEGYCRMRRSEKAIELV 309


>ref|XP_002516618.1| pentatricopeptide repeat-containing protein, putative [Ricinus
           communis] gi|223544438|gb|EEF45959.1| pentatricopeptide
           repeat-containing protein, putative [Ricinus communis]
          Length = 577

 Score =  209 bits (532), Expect = 3e-52
 Identities = 113/225 (50%), Positives = 141/225 (62%), Gaps = 36/225 (16%)
 Frame = -1

Query: 572 CNNLSPE--KTLETALDETGIKPDSTLLQTILPHFDSSPEPFLSLYKWAVKQPSFDP--- 408
           CN LS    K LETALD+TGIKP+++LL  +  HF+SSP+   SL+ WA KQP F+    
Sbjct: 65  CNLLSDPNLKPLETALDQTGIKPETSLLNAVFDHFNSSPKLLHSLFVWADKQPEFESSTT 124

Query: 407 -------------------------------DIFAVLLNRYTSAGMTSSAIRTFEIANEL 321
                                          D FA+L+ RYT AGM  SAIRTFE A  L
Sbjct: 125 LFNSVINALGKMKEFDSAWCLVLDRTGLVSSDTFAILIRRYTRAGMPQSAIRTFEYAISL 184

Query: 320 DSSHYTFSISSLFETLMDSLCKEGHVRVASEYCVKRRELEPGWVPSVGVYNVLLEGWFRL 141
           D     ++  +L E L+DSLCKEGHVRVA EY   R++L+  W+P V +YN++L GWFR 
Sbjct: 185 DFI-CDYNCDALLEILLDSLCKEGHVRVAKEYFDSRKQLDSCWIPHVRIYNIMLNGWFRS 243

Query: 140 GKLKQAEKLWEDMKTENVAPDVVTYGTLVEGYCKLRRVERAMELV 6
            KLK AE+LW +MK  NV+P VVTYGTLVEGYC++RRVERA+ELV
Sbjct: 244 RKLKHAERLWLEMKKNNVSPSVVTYGTLVEGYCRMRRVERAIELV 288


>ref|XP_002308636.1| predicted protein [Populus trichocarpa] gi|222854612|gb|EEE92159.1|
           predicted protein [Populus trichocarpa]
          Length = 607

 Score =  206 bits (525), Expect = 2e-51
 Identities = 112/234 (47%), Positives = 144/234 (61%), Gaps = 45/234 (19%)
 Frame = -1

Query: 572 CNNLSPEK-----TLETALDETGIKPDSTLLQTILPHFDSSPEPFLSLYKWAVKQPSFDP 408
           CN L   K     +L TALD TGI+P+  L+Q++  HFDSSP+   S++ WA K+P F  
Sbjct: 86  CNILKDPKIQLGPSLRTALDRTGIEPELGLIQSVFDHFDSSPKLLHSVFLWAEKKPGFQS 145

Query: 407 ----------------------------------------DIFAVLLNRYTSAGMTSSAI 348
                                                   D FA+L+ RYT AGM+ +AI
Sbjct: 146 SAALFNSMVNFLGKAREFGSAWCLLLDRIGGNEGGDLVSSDTFAILIRRYTRAGMSEAAI 205

Query: 347 RTFEIANELDSSHYTFSISSLFETLMDSLCKEGHVRVASEYCVKRRELEPGWVPSVGVYN 168
           RTFE A+ LD  H + + +SLFE L+DSLCKEGHVRVA++Y  ++ E +P WVPSV +YN
Sbjct: 206 RTFEYASSLDLIHNSEAGTSLFEILLDSLCKEGHVRVATDYFDRKVEKDPCWVPSVRIYN 265

Query: 167 VLLEGWFRLGKLKQAEKLWEDMKTENVAPDVVTYGTLVEGYCKLRRVERAMELV 6
           +LL GWFR  KLK AE+LW +MK +NV P VVTYGTLVEGY ++RRVERA+ELV
Sbjct: 266 ILLNGWFRSRKLKHAERLWLEMKKKNVKPSVVTYGTLVEGYSRMRRVERAIELV 319


>ref|XP_003588687.1| Pentatricopeptide repeat-containing protein [Medicago truncatula]
           gi|355477735|gb|AES58938.1| Pentatricopeptide
           repeat-containing protein [Medicago truncatula]
          Length = 587

 Score =  204 bits (519), Expect = 9e-51
 Identities = 108/229 (47%), Positives = 136/229 (59%), Gaps = 42/229 (18%)
 Frame = -1

Query: 566 NLSPEKTLETALDETGIKPDSTLLQTILPHFDSSPEPFLSLYKWAVKQPSFDPD------ 405
           ++SP  +L T L +TGIKP   LL  +  HF SSP+   SLY WA+ QP F PD      
Sbjct: 84  SISPGSSLLTNLTQTGIKPTPPLLHAVFDHFASSPKLLHSLYLWALNQPGFKPDSSLFDS 143

Query: 404 ------------------------------------IFAVLLNRYTSAGMTSSAIRTFEI 333
                                                FA+++ RY  AGM  +AIRTFE 
Sbjct: 144 VINALAKMKEFDDAWSLVLDRIRRDDDDDEKLVSVGTFAIIIRRYARAGMHKAAIRTFEF 203

Query: 332 ANELDSSHYTFSISSLFETLMDSLCKEGHVRVASEYCVKRRELEPGWVPSVGVYNVLLEG 153
           A +  S   + S  SLFE L+DSLCKEG  R ASEY ++R+E + GWVPS+ VYN++L G
Sbjct: 204 AKDKKSIVDSVSEMSLFEILIDSLCKEGSAREASEYLLRRKETDLGWVPSIRVYNIMLNG 263

Query: 152 WFRLGKLKQAEKLWEDMKTENVAPDVVTYGTLVEGYCKLRRVERAMELV 6
           WFR  KLK AE+LWE+MK ENV P VVTYGTLVEGYC++RRVE+A+E+V
Sbjct: 264 WFRARKLKHAERLWEEMKNENVRPSVVTYGTLVEGYCRMRRVEKALEMV 312


>ref|XP_004136469.1| PREDICTED: pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
           gi|449503560|ref|XP_004162063.1| PREDICTED:
           pentatricopeptide repeat-containing protein At5g11310,
           mitochondrial-like [Cucumis sativus]
          Length = 615

 Score =  184 bits (467), Expect = 9e-45
 Identities = 100/230 (43%), Positives = 132/230 (57%), Gaps = 40/230 (17%)
 Frame = -1

Query: 575 SCNNLSPEKTLETALDETGIKPDSTLLQTILPHFDSSPEPFLSLYKWAVKQPSFDP---- 408
           S  ++ P   LE ALD TGI P S+LL+ +  HFDSSP+   SL+ WA K+  F P    
Sbjct: 97  SDRSVRPGAALEDALDRTGIVPSSSLLEAVFDHFDSSPKFLHSLFLWAAKKSGFRPSAAL 156

Query: 407 ------------------------------------DIFAVLLNRYTSAGMTSSAIRTFE 336
                                               ++F +L+ RY  AGM   AIRT+E
Sbjct: 157 FNRLINVLAKSREFDSAWSLITSRLRGGEESFLVSVEVFVILIRRYARAGMVQPAIRTYE 216

Query: 335 IANELDSSHYTFSISSLFETLMDSLCKEGHVRVASEYCVKRRELEPGWVPSVGVYNVLLE 156
            A  L++   T S   LFE L+DSLCKEGHVRVASEY  ++RE+   + PS+  YN+L+ 
Sbjct: 217 FACNLETISGTGS-EGLFEILLDSLCKEGHVRVASEYFNRKREMGSSFEPSIRAYNILIN 275

Query: 155 GWFRLGKLKQAEKLWEDMKTENVAPDVVTYGTLVEGYCKLRRVERAMELV 6
           GWFR  KLK A++LW +MK   ++P VVTYGTL+EGYC++R VE A+ELV
Sbjct: 276 GWFRSRKLKHAQRLWFEMKKNKISPTVVTYGTLIEGYCRMRSVEIAIELV 325


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