BLASTX nr result

ID: Papaver23_contig00035305 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035305
         (669 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|2...    76   5e-12
emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulga...    73   6e-11
gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptas...    71   2e-10
emb|CAN79410.1| hypothetical protein VITISV_038452 [Vitis vinifera]    69   1e-09
gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptas...    66   5e-09

>ref|XP_002331075.1| predicted protein [Populus trichocarpa] gi|222873039|gb|EEF10170.1|
           predicted protein [Populus trichocarpa]
          Length = 517

 Score = 76.3 bits (186), Expect = 5e-12
 Identities = 62/230 (26%), Positives = 102/230 (44%), Gaps = 10/230 (4%)
 Frame = -2

Query: 662 EGGLGITSLSVMNKALLMKLWWHI--RTSNKKWARYLVANFF-GRN-GVLKRRGVKSTIL 495
           EGGLGI S+   NK  L+K  W++   +    W+ ++ +N   GRN   +K     S   
Sbjct: 158 EGGLGIKSIKEWNKIALLKHIWNLCNDSDGSIWSTWIRSNLLRGRNFWTIKTPQNCSWAW 217

Query: 494 PAIRLVYSQVEENIKVTIGDGRSTSLYYDNWCSNKSIAN-----ILRLEDLDRSIRVSDL 330
             I  + S     +K  IGDG +TSL++DNW  +  +A+      +    + ++ +V+ L
Sbjct: 218 GKILKLRSLAWPKMKYIIGDGMTTSLWFDNWHPHSPLADSYGERFIYDSGMAKNAKVNVL 277

Query: 329 VVNGEWVIDDGHLARLHATGIQLSDLPRPSQGH-DVRFWMPDYKGQFTVHSARELIRPRF 153
           + N EW          H     +     P  G  D   W+     +F+V  A E +R   
Sbjct: 278 IQNSEWKTPTTQAIGWHPIIEAIPSNSNPKMGQKDELVWLDSPNHRFSVKVAWEQLRRHR 337

Query: 152 QSFEGAKLLWRKSIHPCIAAQNWKIIRGACATQDQVRSRFKVEMPTKCVL 3
           Q  E   ++W K+  P  +   W  ++    TQD++  RF +  P +C L
Sbjct: 338 QMVEWHDIVWFKNAVPRHSFLLWMAVQQKLTTQDKLH-RFGIHGPNRCSL 386


>emb|CCA66036.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1369

 Score = 72.8 bits (177), Expect = 6e-11
 Identities = 66/227 (29%), Positives = 100/227 (44%), Gaps = 18/227 (7%)
 Frame = -2

Query: 662  EGGLGITSLSVMNKALLMKLWWHIRTS-NKKWARYLVANFFGRNGVLKRR--GVKSTILP 492
            EGGLGI +  V N+ALL K  W I T  +   AR +   +F R+  L+ R     S    
Sbjct: 859  EGGLGIRNFDVFNRALLAKQAWRILTKPDSLMARVIKGKYFPRSNFLEARVSPNMSFTCK 918

Query: 491  AIRLVYSQVEENIKVTIGDGRSTSLYYDNW---CSNKSIANILRLEDLDRSIRVSDLVVN 321
            +I    + +++ +   IGDGR T+++ D W       SIA    + + D   +V +L+ N
Sbjct: 919  SILSARAVIQKGMCRVIGDGRDTTIWGDPWVPSLERYSIAATEGVSEDDGPQKVCELISN 978

Query: 320  GEWVID--DGHLARLHATGIQLSDLPRPSQGHDVRFWMPDYKGQFTVHSA--RELIRPRF 153
              W ++  +       +T IQ   +    +  D   WM    GQFTV SA   EL+  R 
Sbjct: 979  DRWNVELLNTLFQPWESTAIQRIPVALQKK-PDQWMWMMSKNGQFTVRSAYYHELLEDRK 1037

Query: 152  ---QSFEGAKL-----LWRKSIHPCIAAQNWKIIRGACATQDQVRSR 36
                +  G  L     +W+  I P +   +WK I    A    +R R
Sbjct: 1038 TGPSTSRGPNLKLWQKIWKAKIPPKVKLFSWKAIHNGLAVYTNMRKR 1084


>gb|ABE87589.2| RNA-directed DNA polymerase (Reverse transcriptase); Ribonuclease H;
            Endonuclease/exonuclease/phosphatase [Medicago
            truncatula]
          Length = 1246

 Score = 70.9 bits (172), Expect = 2e-10
 Identities = 61/214 (28%), Positives = 97/214 (45%), Gaps = 8/214 (3%)
 Frame = -2

Query: 668  YDEGGLGITSLSVMNKALLMKLWWHIRTSNKKWARYLVANFFGRNGVLKRRGVKSTILPA 489
            + EGGL I S  ++N A ++KL W++ +SN +WA  L   FF + G   R  VKS++   
Sbjct: 785  WSEGGLDIKSTRLINNAAMLKLAWNLLSSNSQWAVLLKRRFFSQ-GQPIRYFVKSSVWHG 843

Query: 488  IRLVYSQVEENIKVTIGDGRSTSLYYDNWCSNK--SIANILRLEDLDRSIRVSDLVVNGE 315
            ++   S + +N    +G G   +L+ +NW      ++ NI        + +VS+++VNG 
Sbjct: 844  VKNHMSILRQNKLWIVGTGDRINLWTNNWLGEPLVTLFNIDPFFHASFTGKVSEVIVNGN 903

Query: 314  WVIDDGHLARLHATGIQLSDLPRPSQGHDVRFWMPDYKGQFTVHSARELIRPRF------ 153
            W +    L     + +    LPR ++  D   W     GQ T   A   +R  F      
Sbjct: 904  WDLPASLLVPEVTSRLASITLPR-TELPDSLVWTHSADGQLTSKHAVSFLRNAFRFQSQL 962

Query: 152  QSFEGAKLLWRKSIHPCIAAQNWKIIRGACATQD 51
            QS + AK      IH  I A +  +  G C   D
Sbjct: 963  QSIQSAK----ARIHSLI-AMSGNVSTGKCLHSD 991


>emb|CAN79410.1| hypothetical protein VITISV_038452 [Vitis vinifera]
          Length = 256

 Score = 68.6 bits (166), Expect = 1e-09
 Identities = 59/235 (25%), Positives = 97/235 (41%), Gaps = 25/235 (10%)
 Frame = -2

Query: 665 DEGGLGITSLSVMNKALLMKLWWHIRT-SNKKWARYLVANFFGRNGV----LKRRGVKST 501
           ++GGLGI +LS +NKALL K  W   +  +  W + +V  F    G       R      
Sbjct: 28  NBGGLGIRNLSRLNKALLGKWCWRFASEQDSLWKQVIVRKFGEEEGCWCSGASRESHGMG 87

Query: 500 ILPAIRLVYSQVEENIKVTIGDGRSTSLYYDNWCSNKSI---------------ANILRL 366
           +  AIR  + +  + +   +GDGR    + D WC   ++               A + +L
Sbjct: 88  LWKAIRNGWMEFSKRVAFKVGDGRRVRFWKDRWCGEDALEEAFPSLCSLASFRDAWVAQL 147

Query: 365 EDLDRSIRVSDLV---VNGEWVID--DGHLARLHATGIQLSDLPRPSQGHDVRFWMPDYK 201
            D   ++   +LV   +N +W ++  +   +RLH   ++  D        DV FW    K
Sbjct: 148 WDQSGNLVHWNLVFTRLNNDWEMEEVETFFSRLHGHALRRGD-------EDVMFWRVSKK 200

Query: 200 GQFTVHSARELIRPRFQSFEGAKLLWRKSIHPCIAAQNWKIIRGACATQDQVRSR 36
           G FTV      + P       + L+W   +   +    W+ I G   T DQ++ R
Sbjct: 201 GFFTVKYFFSSLVPCIGREFPSSLVWNPWVPKRVNFFAWEAIWGRILTMDQLKRR 255


>gb|ABD28505.2| RNA-directed DNA polymerase (Reverse transcriptase);
           Polynucleotidyl transferase, Ribonuclease H fold
           [Medicago truncatula]
          Length = 729

 Score = 66.2 bits (160), Expect = 5e-09
 Identities = 69/231 (29%), Positives = 105/231 (45%), Gaps = 14/231 (6%)
 Frame = -2

Query: 659 GGLGITSLSVMNKALLMKLWWH-IRTSNKKWARYLVANFFGRNGVLKR----RGVKSTIL 495
           GGLG      MN+A LMK+ W+ I+  +K W R L + + GRN  L      +   S + 
Sbjct: 281 GGLGFKRPHHMNEAFLMKMLWNLIKQPDKLWCRVLYSKY-GRNNDLNNNISSQPYDSPLW 339

Query: 494 PAIRLVYSQVEENIKVTIGDGRSTSLYYDNWCSNK-SIANILRLEDLDRSIRVSDLV-VN 321
            AI  ++   + ++   IGDGRST+ + D W SN  S+ +      +D +I V D +  +
Sbjct: 340 KAIVGIWDDFKRHVIWQIGDGRSTNFWLDKWISNNTSLFSSSTQSYVDTTISVRDAINTS 399

Query: 320 GEW----VIDDGHLARLHATGIQLSDLPRPS--QGHDVRFWMPDYKGQFTVHSARELIRP 159
           G W    ++D+ H+  ++    Q+  LP PS   G D   W      +FTV SA  L + 
Sbjct: 400 GVWDLNFLMDNLHVDIVN----QILALPTPSDFDGPDTIGWGGTNTLKFTVQSAYNLQQE 455

Query: 158 RFQSFEGA-KLLWRKSIHPCIAAQNWKIIRGACATQDQVRSRFKVEMPTKC 9
              +  G  K LW       I    W    G   T  + RS++ V +   C
Sbjct: 456 NPFAVGGDWKTLWNWKGPHRIQTFIWLAAHGRILTNYR-RSKWGVGISPTC 505


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