BLASTX nr result

ID: Papaver23_contig00035290 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035290
         (511 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containi...   175   4e-42
emb|CBI26347.3| unnamed protein product [Vitis vinifera]              175   4e-42
ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricope...   170   1e-40
ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containi...   170   1e-40
ref|XP_002517032.1| pentatricopeptide repeat-containing protein,...   166   2e-39

>ref|XP_002280003.2| PREDICTED: pentatricopeptide repeat-containing protein At3g23020
            [Vitis vinifera]
          Length = 881

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/131 (64%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
 Frame = +1

Query: 1    ANEFSYVMMLCMYKKIGRLDEAIGIAQRMREMGLLTDLLSYNNVISLYASDGRLKEAVET 180
            ANEFS+ MMLCMYK+IG+L EA  I Q+MRE+GL+TDLLSYNNV+  YA DGR K+AV T
Sbjct: 740  ANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGT 799

Query: 181  FREMINSSIQPDDYTFRSLGVVLVKCGVSKDAVSKLEIGRRKDSHSGLHAWVSTLCSIIS 360
            F+EMI ++IQPDD TF+SLGVVLVKCG+ K AV KLE+ R+KD  SGL AW S L S++ 
Sbjct: 800  FKEMIEAAIQPDDCTFKSLGVVLVKCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVE 859

Query: 361  INDT--RKSCS 387
            ++DT  + SCS
Sbjct: 860  VDDTDAQISCS 870


>emb|CBI26347.3| unnamed protein product [Vitis vinifera]
          Length = 862

 Score =  175 bits (443), Expect = 4e-42
 Identities = 85/131 (64%), Positives = 105/131 (80%), Gaps = 2/131 (1%)
 Frame = +1

Query: 1    ANEFSYVMMLCMYKKIGRLDEAIGIAQRMREMGLLTDLLSYNNVISLYASDGRLKEAVET 180
            ANEFS+ MMLCMYK+IG+L EA  I Q+MRE+GL+TDLLSYNNV+  YA DGR K+AV T
Sbjct: 721  ANEFSFAMMLCMYKRIGKLKEAFQIVQKMRELGLVTDLLSYNNVLGFYAMDGRFKDAVGT 780

Query: 181  FREMINSSIQPDDYTFRSLGVVLVKCGVSKDAVSKLEIGRRKDSHSGLHAWVSTLCSIIS 360
            F+EMI ++IQPDD TF+SLGVVLVKCG+ K AV KLE+ R+KD  SGL AW S L S++ 
Sbjct: 781  FKEMIEAAIQPDDCTFKSLGVVLVKCGIPKQAVGKLEMTRKKDPQSGLQAWASILFSVVE 840

Query: 361  INDT--RKSCS 387
            ++DT  + SCS
Sbjct: 841  VDDTDAQISCS 851


>ref|XP_004166077.1| PREDICTED: LOW QUALITY PROTEIN: pentatricopeptide repeat-containing
            protein At3g23020-like [Cucumis sativus]
          Length = 859

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/122 (64%), Positives = 104/122 (85%)
 Frame = +1

Query: 1    ANEFSYVMMLCMYKKIGRLDEAIGIAQRMREMGLLTDLLSYNNVISLYASDGRLKEAVET 180
            ANEF++ MMLCMYKKIGR+ EAI +A++M+E GLL+DLLS+NN+ISLYA DGR KEAV  
Sbjct: 732  ANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSI 791

Query: 181  FREMINSSIQPDDYTFRSLGVVLVKCGVSKDAVSKLEIGRRKDSHSGLHAWVSTLCSIIS 360
            F+EM+ +++QPD+ T++SLGVVL+KCGVSK AVSKLE+  +KD+ SGL AWVS L S++ 
Sbjct: 792  FQEMMKAAVQPDECTYKSLGVVLLKCGVSKQAVSKLEVTXKKDAQSGLQAWVSVLSSVVG 851

Query: 361  IN 366
            +N
Sbjct: 852  MN 853


>ref|XP_004146417.1| PREDICTED: pentatricopeptide repeat-containing protein At3g23020-like
            [Cucumis sativus]
          Length = 858

 Score =  170 bits (431), Expect = 1e-40
 Identities = 79/122 (64%), Positives = 104/122 (85%)
 Frame = +1

Query: 1    ANEFSYVMMLCMYKKIGRLDEAIGIAQRMREMGLLTDLLSYNNVISLYASDGRLKEAVET 180
            ANEF++ MMLCMYKKIGR+ EAI +A++M+E GLL+DLLS+NN+ISLYA DGR KEAV  
Sbjct: 731  ANEFTFAMMLCMYKKIGRIQEAICVARQMKEQGLLSDLLSFNNMISLYAMDGRFKEAVSI 790

Query: 181  FREMINSSIQPDDYTFRSLGVVLVKCGVSKDAVSKLEIGRRKDSHSGLHAWVSTLCSIIS 360
            F+EM+ +++QPD+ T++SLGVVL+KCGVSK AVSKLE+  +KD+ SGL AWVS L S++ 
Sbjct: 791  FQEMMKAAVQPDECTYKSLGVVLLKCGVSKQAVSKLEVTAKKDAQSGLQAWVSVLSSVVG 850

Query: 361  IN 366
            +N
Sbjct: 851  MN 852


>ref|XP_002517032.1| pentatricopeptide repeat-containing protein, putative [Ricinus
            communis] gi|223543667|gb|EEF45195.1| pentatricopeptide
            repeat-containing protein, putative [Ricinus communis]
          Length = 875

 Score =  166 bits (420), Expect = 2e-39
 Identities = 76/123 (61%), Positives = 100/123 (81%)
 Frame = +1

Query: 1    ANEFSYVMMLCMYKKIGRLDEAIGIAQRMREMGLLTDLLSYNNVISLYASDGRLKEAVET 180
            ANEF+Y MMLCMYK++G  ++AI IA++MRE+GLLT LLSYNNV+ LYA DGR KEAV T
Sbjct: 745  ANEFTYAMMLCMYKRLGWFEQAIQIAKQMRELGLLTYLLSYNNVLGLYALDGRFKEAVGT 804

Query: 181  FREMINSSIQPDDYTFRSLGVVLVKCGVSKDAVSKLEIGRRKDSHSGLHAWVSTLCSIIS 360
            F+EM+ + IQPDD TF+SLG+VLVKCG+SK AV KLE   +KD HSGL  W++ L +++ 
Sbjct: 805  FKEMVGAGIQPDDCTFKSLGIVLVKCGISKQAVGKLEATTKKDRHSGLQTWLAALSAVVE 864

Query: 361  IND 369
            +++
Sbjct: 865  VDE 867


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