BLASTX nr result
ID: Papaver23_contig00035285
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00035285
(753 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|2... 48 9e-09
gb|ABD28730.1| Ribonuclease H [Medicago truncatula] 44 1e-08
ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago... 44 1e-07
ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thalia... 47 2e-07
ref|XP_002332446.1| predicted protein [Populus trichocarpa] gi|2... 49 2e-06
>ref|XP_002303192.1| predicted protein [Populus trichocarpa] gi|222840624|gb|EEE78171.1|
predicted protein [Populus trichocarpa]
Length = 677
Score = 48.1 bits (113), Expect(2) = 9e-09
Identities = 28/117 (23%), Positives = 52/117 (44%)
Frame = +1
Query: 400 RMTKDLWLLANLVIRSELWEVRNKAVFENKKPCWNVFFRKVLMSIQEFSIRLKGDMRNCS 579
+ K WL+ + LW +RN +F+ K P ++ F ++ + + D
Sbjct: 507 KFQKKAWLMLFFSVAWSLWLLRNDLIFQQKSPNYDSVFFLIITRLCLWLKAFHPDFPYSP 566
Query: 580 EDLILLEYFRVKHRRVRMVTPVECFWQPPSCDELQLCCDGAARGNPGVAGAGIVARD 750
DL+ ++ V+ +T W PP+ + DG++ G PG++G G V R+
Sbjct: 567 SDLLRSVEGLIRWSNVQ-ITRTGVIWSPPTIGSFKWNVDGSSLGKPGLSGIGGVLRN 622
Score = 37.7 bits (86), Expect(2) = 9e-09
Identities = 19/68 (27%), Positives = 34/68 (50%), Gaps = 1/68 (1%)
Frame = +3
Query: 129 LWRKEIHPKLAAQNWKFLRNACATNDIIKSRFKIHLAN-NCAICGVTEETLHHILYDCNF 305
+W+ + PK+ W + N T ++ R + +N NC IC V EE++ H++ C
Sbjct: 412 IWKGVVPPKVEIFCWMVIINILNTRGVLVRRGVLDSSNSNCPICLVEEESVDHLILLCYK 471
Query: 306 AMKAWTWI 329
+ W+ I
Sbjct: 472 HLTIWSKI 479
>gb|ABD28730.1| Ribonuclease H [Medicago truncatula]
Length = 409
Score = 44.3 bits (103), Expect(2) = 1e-08
Identities = 20/68 (29%), Positives = 30/68 (44%)
Frame = +3
Query: 126 LLWRKEIHPKLAAQNWKFLRNACATNDIIKSRFKIHLANNCAICGVTEETLHHILYDCNF 305
+LW P A W+FL N T+D ++ R ++ C C ET HI C
Sbjct: 74 MLWNAYTPPTGAFITWRFLHNKLPTDDNLRKRGCYIVSICCCFCRKQAETSSHIFLQCPV 133
Query: 306 AMKAWTWI 329
++ W W+
Sbjct: 134 TLQLWDWL 141
Score = 40.8 bits (94), Expect(2) = 1e-08
Identities = 29/120 (24%), Positives = 50/120 (41%), Gaps = 3/120 (2%)
Frame = +1
Query: 397 SRMTKDLWLLANLVIRSELWEVRNKAVFENKKPCWNVFFRKVLMSIQEFSIRL---KGDM 567
SRM + + A + I +W N F+ + + F +L + S L KG
Sbjct: 158 SRMVQHVMNSAIVHIMWSIWLECNNKYFDGVQKPMSTLFNTILAEVLRLSFMLDIVKG-- 215
Query: 568 RNCSEDLILLEYFRVKHRRVRMVTPVECFWQPPSCDELQLCCDGAARGNPGVAGAGIVAR 747
+ +D L F + + R+ E W PP +++ CDG+ G+P G++ R
Sbjct: 216 ASSMQDFKLARLFSIPFKTNRVNPCREIIWVPPHGGCMKINCDGSVVGSPSCGSIGVIFR 275
>ref|XP_003605842.1| Glycerol-3-phosphate dehydrogenase [Medicago truncatula]
gi|355506897|gb|AES88039.1| Glycerol-3-phosphate
dehydrogenase [Medicago truncatula]
Length = 866
Score = 43.5 bits (101), Expect(2) = 1e-07
Identities = 15/67 (22%), Positives = 35/67 (52%)
Frame = +3
Query: 129 LWRKEIHPKLAAQNWKFLRNACATNDIIKSRFKIHLANNCAICGVTEETLHHILYDCNFA 308
+W I P + W+ + + ++ +K R + + C++C EE+ H+ ++C++A
Sbjct: 47 IWSPNIPPSKSLLAWRLMNDKIPVDEKLKERGHV-IPFICSLCMTAEESSFHLFFECSYA 105
Query: 309 MKAWTWI 329
+ W W+
Sbjct: 106 VHLWCWL 112
Score = 38.5 bits (88), Expect(2) = 1e-07
Identities = 22/98 (22%), Positives = 42/98 (42%)
Frame = +1
Query: 439 IRSELWEVRNKAVFENKKPCWNVFFRKVLMSIQEFSIRLKGDMRNCSEDLILLEYFRVKH 618
I S +W RN F+N+K W ++++++ + K + + +L+ F V
Sbjct: 151 ILSAIWNARNTYRFKNRKIHWESVISQIIVNVSLSASNSKLSASSGIREFSILKAFNVSI 210
Query: 619 RRVRMVTPVECFWQPPSCDELQLCCDGAARGNPGVAGA 732
++++ E PP ++ CDGA GA
Sbjct: 211 HPLKLLIVKEVISSPPISGWIKGNCDGAFAAGKAACGA 248
>ref|NP_189164.1| Ribonuclease H-like protein [Arabidopsis thaliana]
gi|9294184|dbj|BAB02086.1| reverse transcriptase-like
protein [Arabidopsis thaliana]
gi|332643482|gb|AEE77003.1| Ribonuclease H-like protein
[Arabidopsis thaliana]
Length = 343
Score = 47.4 bits (111), Expect(2) = 2e-07
Identities = 23/66 (34%), Positives = 35/66 (53%), Gaps = 2/66 (3%)
Frame = +3
Query: 129 LWRKEIHPKLAAQNWKFLRNACATNDIIKSRFKIHLANN--CAICGVTEETLHHILYDCN 302
+W+ + PK+ WK L A AT D +K R H+ N+ C C +ET H+ +DC
Sbjct: 18 IWKLKTAPKIKHFLWKLLSGALATGDNLKRR---HIRNHPQCHRCCQEDETSQHLFFDCF 74
Query: 303 FAMKAW 320
+A + W
Sbjct: 75 YAQQVW 80
Score = 33.9 bits (76), Expect(2) = 2e-07
Identities = 33/129 (25%), Positives = 49/129 (37%)
Frame = +1
Query: 364 LVSSCKAAVGRSRMTKDLWLLANLVIRSELWEVRNKAVFENKKPCWNVFFRKVLMSIQEF 543
L+SSC A +W+L L W+ RN+ VF+ K W ++ +QE+
Sbjct: 104 LLSSCLANRQPQLFNLAIWILWRL------WKSRNQLVFQQKSISWQNTLQRARNDVQEW 157
Query: 544 SIRLKGDMRNCSEDLILLEYFRVKHRRVRMVTPVECFWQPPSCDELQLCCDGAARGNPGV 723
D + L +V R + T WQ P ++ DGA
Sbjct: 158 E-----DTNTYVQSL----NQQVHSSRHQQPTMARTKWQRPPSTWIKYNYDGAFNHQTRN 208
Query: 724 AGAGIVARD 750
A AG + RD
Sbjct: 209 AKAGWLMRD 217
>ref|XP_002332446.1| predicted protein [Populus trichocarpa] gi|222833062|gb|EEE71539.1|
predicted protein [Populus trichocarpa]
Length = 242
Score = 48.9 bits (115), Expect(2) = 2e-06
Identities = 28/117 (23%), Positives = 53/117 (45%)
Frame = +1
Query: 400 RMTKDLWLLANLVIRSELWEVRNKAVFENKKPCWNVFFRKVLMSIQEFSIRLKGDMRNCS 579
+ K WL+ + LW +RN +F+ K P ++ F ++ + + L D
Sbjct: 81 KFQKKAWLMLFFSVAWSLWLLRNDLIFQQKSPNYDSVFFLIITRLCLWLKALHLDFPYSP 140
Query: 580 EDLILLEYFRVKHRRVRMVTPVECFWQPPSCDELQLCCDGAARGNPGVAGAGIVARD 750
DL+ ++ ++ +T W PP+ D + DG++ G PG++G V R+
Sbjct: 141 SDLLRSAEGLIRWSNIQ-ITRTSVIWFPPTIDSFKWNVDGSSLGKPGLSGISGVLRN 196
Score = 28.9 bits (63), Expect(2) = 2e-06
Identities = 11/30 (36%), Positives = 18/30 (60%)
Frame = +3
Query: 240 NNCAICGVTEETLHHILYDCNFAMKAWTWI 329
+NC C V EE++HH++ C+ W+ I
Sbjct: 24 SNCPNCLVEEESVHHLILHCHKHWIIWSKI 53