BLASTX nr result
ID: Papaver23_contig00035205
seq
BLASTX 2.2.25 [Feb-01-2011]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= Papaver23_contig00035205
(430 letters)
Database: ./nr
23,641,837 sequences; 8,123,359,852 total letters
Searching..................................................done
Score E
Sequences producing significant alignments: (bits) Value
ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containi... 198 4e-49
emb|CBI33923.3| unnamed protein product [Vitis vinifera] 177 6e-43
ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|2... 174 7e-42
ref|XP_002528778.1| pentatricopeptide repeat-containing protein,... 169 2e-40
ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containi... 168 5e-40
>ref|XP_002278897.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Vitis vinifera]
Length = 719
Score = 198 bits (503), Expect = 4e-49
Identities = 94/141 (66%), Positives = 111/141 (78%)
Frame = -1
Query: 430 IKSCVNFNKPETGLKFYYENMFAKCLSPNHYTFPLLVKICAEMGCVEQGEKTHSRILKFG 251
+++ VN N P T L FYYE M KC++PNHYTFPLLVK+C E+G + GEK H+RILKFG
Sbjct: 130 MRTYVNVNDPYTALGFYYEQMVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFG 189
Query: 250 FESDLFVRNTLIHMYSSFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRL 71
FE DLFVRN+LIHMYS RI DAR +F+ S SD+VTWNSMIDGYVKNGE+ AR L
Sbjct: 190 FELDLFVRNSLIHMYSVCGRIGDARAMFEVCSI--SDLVTWNSMIDGYVKNGEIGAAREL 247
Query: 70 FDEMPERDIVSWNSIIAGYTG 8
F+EMPERD+ SWNS+IAGY G
Sbjct: 248 FEEMPERDLFSWNSMIAGYVG 268
Score = 55.5 bits (132), Expect = 5e-06
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Frame = -1
Query: 370 MFAKCLS---PNHYTFPLLVKICAEMGCVEQGEKTHSRILKFG-FESDLFVRNTLIHMYS 203
MF K + PN T ++ CA +G +++G+ HS I E D+ + L+ MY+
Sbjct: 340 MFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYA 399
Query: 202 SFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRLFDEMPER 50
+ AR +FD S + +V+WNSMI GY +G+ + A +F +M +R
Sbjct: 400 KCGAMDLARDVFDKMS--NRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR 448
>emb|CBI33923.3| unnamed protein product [Vitis vinifera]
Length = 461
Score = 177 bits (450), Expect = 6e-43
Identities = 84/121 (69%), Positives = 98/121 (80%)
Frame = -1
Query: 370 MFAKCLSPNHYTFPLLVKICAEMGCVEQGEKTHSRILKFGFESDLFVRNTLIHMYSSFRR 191
M KC++PNHYTFPLLVK+C E+G + GEK H+RILKFGFE DLFVRN+LIHMYS R
Sbjct: 1 MVRKCVAPNHYTFPLLVKVCWEIGSIGDGEKIHARILKFGFELDLFVRNSLIHMYSVCGR 60
Query: 190 IKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRLFDEMPERDIVSWNSIIAGYT 11
I DAR +F+ S SD+VTWNSMIDGYVKNGE+ AR LF+EMPERD+ SWNS+IAGY
Sbjct: 61 IGDARAMFEVCSI--SDLVTWNSMIDGYVKNGEIGAARELFEEMPERDLFSWNSMIAGYV 118
Query: 10 G 8
G
Sbjct: 119 G 119
Score = 55.5 bits (132), Expect = 5e-06
Identities = 36/111 (32%), Positives = 59/111 (53%), Gaps = 4/111 (3%)
Frame = -1
Query: 370 MFAKCLS---PNHYTFPLLVKICAEMGCVEQGEKTHSRILKFG-FESDLFVRNTLIHMYS 203
MF K + PN T ++ CA +G +++G+ HS I E D+ + L+ MY+
Sbjct: 191 MFDKMMGETMPNEATLVSVLTACAHLGRLDRGKWIHSYIKNNRVIEPDVLLSTALLTMYA 250
Query: 202 SFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRLFDEMPER 50
+ AR +FD S + +V+WNSMI GY +G+ + A +F +M +R
Sbjct: 251 KCGAMDLARDVFDKMS--NRSVVSWNSMIMGYGMHGQADKALEMFLDMEKR 299
>ref|XP_002329535.1| predicted protein [Populus trichocarpa] gi|222870244|gb|EEF07375.1|
predicted protein [Populus trichocarpa]
Length = 617
Score = 174 bits (441), Expect = 7e-42
Identities = 81/142 (57%), Positives = 106/142 (74%)
Frame = -1
Query: 430 IKSCVNFNKPETGLKFYYENMFAKCLSPNHYTFPLLVKICAEMGCVEQGEKTHSRILKFG 251
++S VN N P L+FYYE M AK + PNHYTFPL+ K+CA++G + +G+K H+ ++KFG
Sbjct: 129 MRSFVNVNDPFGALRFYYEKMIAKWVLPNHYTFPLVAKVCADIGSLREGQKVHALVVKFG 188
Query: 250 FESDLFVRNTLIHMYSSFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRL 71
FE DLFVRN+ I YS R DAR +FD+ D+V+WNSMIDGYVKNGE+ +AR +
Sbjct: 189 FELDLFVRNSFIRFYSVCGRTSDARMVFDNGFV--LDLVSWNSMIDGYVKNGELGLAREI 246
Query: 70 FDEMPERDIVSWNSIIAGYTGV 5
FDEM ERDI +WNS+I+GY GV
Sbjct: 247 FDEMYERDIFTWNSMISGYVGV 268
Score = 70.1 bits (170), Expect = 2e-10
Identities = 39/97 (40%), Positives = 59/97 (60%), Gaps = 1/97 (1%)
Frame = -1
Query: 301 GCVEQGEKTHSR-ILKFGFESDLFVRNTLIHMYSSFRRIKDARKLFDDASFDHSDIVTWN 125
G V+ GE +R I +E D+F N++I Y ++ AR LFD D+V+WN
Sbjct: 233 GYVKNGELGLAREIFDEMYERDIFTWNSMISGYVGVGDMEAARGLFD--KMPSRDVVSWN 290
Query: 124 SMIDGYVKNGEVNVARRLFDEMPERDIVSWNSIIAGY 14
MIDG+ + +V++A + FDEMP R++VSWN ++A Y
Sbjct: 291 CMIDGFARIKDVSMAAKFFDEMPLRNVVSWNVMLALY 327
Score = 56.2 bits (134), Expect = 3e-06
Identities = 31/108 (28%), Positives = 56/108 (51%)
Frame = -1
Query: 382 YYENMFAKCLSPNHYTFPLLVKICAEMGCVEQGEKTHSRILKFGFESDLFVRNTLIHMYS 203
+++ M P+ + ++ CAE+ ++QG+ HS + G + D+ + L+ MY+
Sbjct: 339 FFDMMVGGDFVPDEASLVSVLTACAELKMLDQGKWVHSYMKDNGIKPDMLLSTALLTMYA 398
Query: 202 SFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRLFDEM 59
+ AR++FD +V+WNSMI GY +G + A +F EM
Sbjct: 399 KCGAMDLAREVFD--KMPEKSVVSWNSMIIGYGIHGHGDKALEMFREM 444
>ref|XP_002528778.1| pentatricopeptide repeat-containing protein, putative [Ricinus
communis] gi|223531781|gb|EEF33600.1| pentatricopeptide
repeat-containing protein, putative [Ricinus communis]
Length = 518
Score = 169 bits (428), Expect = 2e-40
Identities = 77/134 (57%), Positives = 103/134 (76%)
Frame = -1
Query: 409 NKPETGLKFYYENMFAKCLSPNHYTFPLLVKICAEMGCVEQGEKTHSRILKFGFESDLFV 230
N P L+FYY+ M AK + PN YTFPLLVK+CA++G +++G+K H+ ++KFGFE D +V
Sbjct: 134 NDPFGALRFYYDKMIAKWVLPNRYTFPLLVKVCADIGSLKEGQKAHACVVKFGFEFDAYV 193
Query: 229 RNTLIHMYSSFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRLFDEMPER 50
RN+L+HMYS+ R+ DAR LF+ D+V+WNSMI GYVKNG++ +AR LFDEMPER
Sbjct: 194 RNSLLHMYSACGRVLDARLLFESGFV--LDLVSWNSMIIGYVKNGDIGLARELFDEMPER 251
Query: 49 DIVSWNSIIAGYTG 8
D SWNS+I+GY G
Sbjct: 252 DAFSWNSMISGYVG 265
Score = 70.1 bits (170), Expect = 2e-10
Identities = 37/78 (47%), Positives = 51/78 (65%)
Frame = -1
Query: 247 ESDLFVRNTLIHMYSSFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRLF 68
E D F N++I Y ++ A+KLFD+ D+V+WN MIDGY K V+VAR LF
Sbjct: 250 ERDAFSWNSMISGYVGAGDVEAAKKLFDN--MPSRDVVSWNCMIDGYAKIRNVSVARWLF 307
Query: 67 DEMPERDIVSWNSIIAGY 14
++MP R+IVSWN ++A Y
Sbjct: 308 NQMPFRNIVSWNIMLALY 325
>ref|XP_003525595.1| PREDICTED: pentatricopeptide repeat-containing protein
At3g29230-like [Glycine max]
Length = 595
Score = 168 bits (425), Expect = 5e-40
Identities = 78/136 (57%), Positives = 106/136 (77%), Gaps = 2/136 (1%)
Frame = -1
Query: 406 KPE--TGLKFYYENMFAKCLSPNHYTFPLLVKICAEMGCVEQGEKTHSRILKFGFESDLF 233
KP+ L+FYY M A+ + PNHYTFPLL+K+C ++G +G K H+RI+KFGF SDLF
Sbjct: 84 KPDFPAALRFYYCKMLARSVPPNHYTFPLLIKVCTDIGSFREGLKGHARIVKFGFGSDLF 143
Query: 232 VRNTLIHMYSSFRRIKDARKLFDDASFDHSDIVTWNSMIDGYVKNGEVNVARRLFDEMPE 53
RN+LI MYS F RI +AR +FD++ + D+V++NSMIDGYVKNGE+ AR++F+EMP+
Sbjct: 144 ARNSLIRMYSVFGRIGNARMVFDESCW--LDLVSYNSMIDGYVKNGEIGAARKVFNEMPD 201
Query: 52 RDIVSWNSIIAGYTGV 5
RD++SWN +IAGY GV
Sbjct: 202 RDVLSWNCLIAGYVGV 217