BLASTX nr result

ID: Papaver23_contig00035165 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035165
         (689 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002522932.1| conserved hypothetical protein [Ricinus comm...    83   6e-14
emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulga...    81   2e-13
ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein A...    80   5e-13
emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|73210...    80   5e-13
emb|CAN68348.1| hypothetical protein VITISV_032025 [Vitis vinifera]    79   1e-12

>ref|XP_002522932.1| conserved hypothetical protein [Ricinus communis]
           gi|223537826|gb|EEF39443.1| conserved hypothetical
           protein [Ricinus communis]
          Length = 303

 Score = 82.8 bits (203), Expect = 6e-14
 Identities = 36/112 (32%), Positives = 62/112 (55%)
 Frame = +3

Query: 3   KMLYFQNRLVLVNTVISSYSIHNMVVYKWPQKFIRQCERVIRNFLRSGDSGMSRAFMVGF 182
           + L+   RL L+N+VI +  +H  ++Y+WP   ++  E+ IRNFL +G     +   V +
Sbjct: 169 RTLFMAGRLALINSVIFASLLHTFMMYRWPSSLLKSIEKAIRNFLWTGSVSYKKLVTVKW 228

Query: 183 DKVCSPNSEGGLGLSKMDVLNKAMVAKLWWNIKRSPKK*ARFQETKFTYRDG 338
              C P SEGG+GL ++DVLN+ M+ ++ W    +     RF  +++    G
Sbjct: 229 GHCCKPISEGGIGLKRLDVLNRTMLCRIAWKFYSNDSFVYRFLRSRYLVASG 280


>emb|CCA65997.1| hypothetical protein [Beta vulgaris subsp. vulgaris]
          Length = 1363

 Score = 80.9 bits (198), Expect = 2e-13
 Identities = 66/239 (27%), Positives = 107/239 (44%), Gaps = 10/239 (4%)
 Frame = +3

Query: 3    KMLYFQNRLVLVNTVISSYSIHNMVVYKWPQKFIRQCERVIRNFLRSGDSGMSRAFMVGF 182
            K L    R  L+ +V+SS+ ++ M     P   + + E+  R FL +          + +
Sbjct: 785  KYLNMAGRCTLIKSVVSSFPVYGMQSSLLPVSVMNEIEKDCRKFLWNKMDKSHYLARMSW 844

Query: 183  DKVCSPNSEGGLGLSKMDVLNKAMVAKL-WWNIKRSPKK*ARFQETKFTYRDGRVKVA-- 353
            D++CSP  +GGLG  ++   N A +AKL W  IK   K   R  + ++  R   +     
Sbjct: 845  DRICSPTGKGGLGFRRLHNWNLAFMAKLGWMIIKDETKLWVRILKARYWERGSFLSAVGK 904

Query: 354  RVKSPILPGIRWVNNLVTQNSKSLIGDGRSTSLFFYIWLSNNTLTAVLGEGLDRSA---R 524
               SPI   I     L+ +     IG+GRSTSL+++ W+    L  V+G  +       +
Sbjct: 905  NHHSPIWRDIVKGRELLEKGLVRRIGNGRSTSLWYHWWVGGGPLVDVMGSNIPEFMSHWQ 964

Query: 525  VSGLFVQGTRSFNNQHASVLLRAGITME----SLPRLRIGPDKFVWMPDMRGRFTVKSA 689
            VS +  +G   ++ +  S LL   I  +     L  +    D F W  +  G F+VKSA
Sbjct: 965  VSNIIKRG--RWDTKKISHLLPPDILKQIKEIPLASMSEVEDDFTWNFEKNGTFSVKSA 1021


>ref|XP_003566324.1| PREDICTED: putative ribonuclease H protein At1g65750-like
           [Brachypodium distachyon]
          Length = 776

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 58/213 (27%), Positives = 99/213 (46%), Gaps = 7/213 (3%)
 Frame = +3

Query: 72  MVVYKWPQKFIRQCERVIRNFLRSGDSGMSRAFMVGFDKVCSPNSEGGLGLSKMDVLNKA 251
           M V+K+ +      E++ RNFL   +    +   + ++K+  P S+GG+G   M + N+A
Sbjct: 1   MSVFKFSKGLCEDLEQLTRNFLWGDEENKRKVHWLAWEKMIQPKSKGGMGFRDMALFNQA 60

Query: 252 MVAKLWWNIKRSPKK-*ARFQETKFTYRDGRVKVARVK--SPILPGIRWVNNLVTQNSKS 422
           ++AK  W +   P    AR  + K+      +  A ++  SP+  GI+   +L+ +    
Sbjct: 61  LLAKQAWRLIDKPDSFCARLIKAKYFPHGNLLDTAVIQSSSPVWQGIKHGLDLLKKGYIW 120

Query: 423 LIGDGRSTSLFFYIWLSNNTLTAVLGEGLDRSARVSGLFVQGTRSFNNQHASVLL----R 590
            IG+GRS  ++ + WL    L      G  R  RVS L + G  ++N +    +      
Sbjct: 121 RIGNGRSVDIWRHNWLPRGNLQVSGTAGNTRLRRVSDLMLPGLHTWNEELIHQIFYPHDA 180

Query: 591 AGITMESLPRLRIGPDKFVWMPDMRGRFTVKSA 689
             I   +LP   +  D   W P+  G F+VKSA
Sbjct: 181 DAILQITLPNYDV-DDVVAWQPEKLGFFSVKSA 212


>emb|CAB78008.1| putative protein [Arabidopsis thaliana] gi|7321072|emb|CAB82119.1|
            putative protein [Arabidopsis thaliana]
          Length = 947

 Score = 79.7 bits (195), Expect = 5e-13
 Identities = 68/240 (28%), Positives = 105/240 (43%), Gaps = 11/240 (4%)
 Frame = +3

Query: 3    KMLYFQNRLVLVNTVISSYSIHNMVVYKWPQKFIRQCERVIRNFLRSGDSGMSRAFMVGF 182
            + L F  RL L  +V+S   IH M     PQ  +   +++ R FL    +   +  +V +
Sbjct: 459  RSLSFAGRLTLTKSVLSLIPIHTMSTISLPQSTLEGLDKLARVFLLGSSAEKKKLHLVAW 518

Query: 183  DKVCSPNSEGGLGLSKMDVLNKAMVAKLWWN-IKRSPKK*ARFQETKFTYRDGRVKVARV 359
            D+VC P SEGGLG+     +NKA+V+K+ W  I       AR   +K  YR G      +
Sbjct: 519  DRVCLPKSEGGLGIRTSKCMNKALVSKVGWRLINDRYSLWARILRSK--YRVG------L 570

Query: 360  KSPILPGIRWVNNLVTQNSKSLIGDGRSTSLFFYIWLSNNTL---TAVLGEGLDRSARVS 530
            +  +  G RWV           +G+GR    +   WLS+  L     +     ++  RV 
Sbjct: 571  REVVSRGSRWV-----------VGNGRDILFWSDNWLSHEALINRAVIEIPNSEKELRVK 619

Query: 531  GLFVQG-------TRSFNNQHASVLLRAGITMESLPRLRIGPDKFVWMPDMRGRFTVKSA 689
             L+  G          + + H  + L A + ++S+   R   D+  W     G FTVKSA
Sbjct: 620  DLWANGLGWKLDKIEPYISYHTRLEL-AAVVVDSVTGAR---DRLSWGYSADGVFTVKSA 675


>emb|CAN68348.1| hypothetical protein VITISV_032025 [Vitis vinifera]
          Length = 1670

 Score = 78.6 bits (192), Expect = 1e-12
 Identities = 59/243 (24%), Positives = 112/243 (46%), Gaps = 23/243 (9%)
 Frame = +3

Query: 24   RLVLVNTVISSYSIHNMVVYKWPQKFIRQCERVIRNFLRSGDSGMSRAFMVGFDKVCSPN 203
            R+ L+ + ++S  ++ M +++ P+   R+ E++ RNFL  G +G ++A +V ++ VC+  
Sbjct: 1342 RITLIKSTLASIPLYQMSLFRMPKSVARRLEKLQRNFLWGGANGGNKAHLVKWEVVCADK 1401

Query: 204  SEGGLGLSKMDVLNKAMVAKLWWNIKRSPKK------*ARFQETKFTYRDGR---VKVAR 356
             +GGLGL K+  LNKA++ K  W   R+ ++       A++ + +F +R  +   V   R
Sbjct: 1402 EKGGLGLRKLIWLNKALLGKWIWRFARAKEELWKKVLEAKYGQEEFGWRTRKANGVFGVR 1461

Query: 357  VKSPILPGIRWVNNLVTQNSKSLIGDGRSTSLFFYIWLSNNTLTAVLGEGLDRSARVSGL 536
            V   IL    W      +N    +G G     +   W  NN L+ V  +    +A+ +G 
Sbjct: 1462 VWKEILKESTW----CWENMVFKVGKGNKIRFWIDPWCGNNVLSQVFPDLFSMAAQRNGT 1517

Query: 537  F--------------VQGTRSFNNQHASVLLRAGITMESLPRLRIGPDKFVWMPDMRGRF 674
                           ++  R FN+    ++    + + +  R+ +  D  +W     G F
Sbjct: 1518 MEDYWDQNLGHGGWNLRLLRDFNDWELGLVDNMLVELRNY-RVTLEEDSVLWRGGADGLF 1576

Query: 675  TVK 683
             VK
Sbjct: 1577 KVK 1579


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