BLASTX nr result

ID: Papaver23_contig00035153 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035153
         (718 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]    65   1e-08
gb|EFA06256.1| hypothetical protein TcasGA2_TC009115 [Tribolium ...    60   6e-07
ref|XP_001813413.1| PREDICTED: similar to copia-type polyprotein...    60   6e-07
emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera]    59   1e-06
gb|AEJ72555.1| putative retroelement polyprotein [Malus x domest...    58   2e-06

>emb|CAN83392.1| hypothetical protein VITISV_041406 [Vitis vinifera]
          Length = 1262

 Score = 65.1 bits (157), Expect = 1e-08
 Identities = 38/124 (30%), Positives = 59/124 (47%), Gaps = 18/124 (14%)
 Frame = +3

Query: 78  ECHICRKKGHYASRCHFRYHP------------PTVTSTSSATGHISTVENADQQVNSSN 221
           +C +C K GH   RC +RY P            P V  + +  G   ++ +A   VN + 
Sbjct: 182 QCQLCNKFGHTVHRCFYRYDPNFHGNMPANGPTPGVLGSGARNGASGSISSAGN-VNLTE 240

Query: 222 SGAQEFAVFSAYSASTSTPQCIS------DSGATSHMTGDATLLHHTSSYKGKDQVHIGN 383
             AQE   +S   A  +TP+ +       DSGAT+H+T D   L+  + Y G  ++H+GN
Sbjct: 241 YDAQENQDYSEMEAMVATPEDLQNCCWFPDSGATNHVTHDLGNLNSGAEYNGNSKIHMGN 300

Query: 384 GQNI 395
           G  +
Sbjct: 301 GTGL 304


>gb|EFA06256.1| hypothetical protein TcasGA2_TC009115 [Tribolium castaneum]
          Length = 1267

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = +2

Query: 374  YWQRTKHIEMQYHLVRELVEDGFIQLHHVASEDQLADLFTKGQCYPTFSRLLLQM 538
            Y +RTKHI+++YH VRE  E+G I L +V S +Q+AD+FTK  CY  F+  +L +
Sbjct: 1204 YHKRTKHIDVRYHFVREKYENGDIVLKYVPSTEQVADVFTKALCYAKFNVFVLNL 1258


>ref|XP_001813413.1| PREDICTED: similar to copia-type polyprotein, putative [Tribolium
            castaneum]
          Length = 1269

 Score = 59.7 bits (143), Expect = 6e-07
 Identities = 27/55 (49%), Positives = 39/55 (70%)
 Frame = +2

Query: 374  YWQRTKHIEMQYHLVRELVEDGFIQLHHVASEDQLADLFTKGQCYPTFSRLLLQM 538
            Y +RTKHI+++YH VRE  E+G I L +V S +Q+AD+FTK  CY  F+  +L +
Sbjct: 1206 YHKRTKHIDVRYHFVREKYENGDIVLKYVPSTEQVADVFTKALCYAKFNVFVLNL 1260


>emb|CAN65114.1| hypothetical protein VITISV_011221 [Vitis vinifera]
          Length = 787

 Score = 58.9 bits (141), Expect = 1e-06
 Identities = 40/130 (30%), Positives = 63/130 (48%), Gaps = 3/130 (2%)
 Frame = +3

Query: 15  TSQEGSSVSANGFVRRDYSQVECHICRKKGHYASRCHFRYHPPTVTSTSSATGHISTVEN 194
           +S  G + S +G  RR      C ICR +GHYA RC+ RY      + + ++ H++   N
Sbjct: 250 SSNRGRTYSGHG--RRP---PRCQICRIEGHYADRCNQRY------AWTDSSAHLAEAFN 298

Query: 195 ADQQVNSSNSGAQEFAVFSAYSASTSTPQCIS---DSGATSHMTGDATLLHHTSSYKGKD 365
                                S S S P+  +   D+GA++HMT D ++L  + +Y GKD
Sbjct: 299 T--------------------SCSLSRPKAANWFLDTGASAHMTTDPSILDQSKNYMGKD 338

Query: 366 QVHIGNGQNI 395
            V +GNG ++
Sbjct: 339 SVIVGNGASL 348


>gb|AEJ72555.1| putative retroelement polyprotein [Malus x domestica]
          Length = 1249

 Score = 58.2 bits (139), Expect = 2e-06
 Identities = 29/55 (52%), Positives = 36/55 (65%)
 Frame = +2

Query: 374  YWQRTKHIEMQYHLVRELVEDGFIQLHHVASEDQLADLFTKGQCYPTFSRLLLQM 538
            + +RTKHIEM  H VRE  +   IQ   V S DQLAD+FTKG C   F+ LL+Q+
Sbjct: 1186 FHERTKHIEMDCHFVREKTQSDVIQHVFVRSTDQLADIFTKGLCRVQFNTLLVQL 1240


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