BLASTX nr result

ID: Papaver23_contig00035133 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035133
         (534 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002467532.1| hypothetical protein SORBIDRAFT_01g029700 [S...    60   3e-07
ref|XP_002454960.1| hypothetical protein SORBIDRAFT_03g002140 [S...    57   2e-06

>ref|XP_002467532.1| hypothetical protein SORBIDRAFT_01g029700 [Sorghum bicolor]
           gi|241921386|gb|EER94530.1| hypothetical protein
           SORBIDRAFT_01g029700 [Sorghum bicolor]
          Length = 283

 Score = 59.7 bits (143), Expect = 3e-07
 Identities = 35/109 (32%), Positives = 52/109 (47%), Gaps = 2/109 (1%)
 Frame = +1

Query: 151 KLSPKIHTFV*RIIHNGLGTLNKLGNFIDDVPVKCQLCGAEEETIDHLSTRCQFAKAVLF 330
           ++SP I TF+ R+I   + T  +  N  D +   C LCGA E  + HL   C FA+AV F
Sbjct: 117 RISPVIKTFIWRLIRRAIATGARANNLTDKIDQNCALCGALENDV-HLFFHCDFARAVWF 175

Query: 331 GSSLDFRVPS--DQNYFVKQCLLQWLEAKDDGYSFCLGACLLWSIWKAK 471
            +       +   +   V+QCL Q ++ +            LW IWKA+
Sbjct: 176 SAKTPIISSTLLQEQDGVQQCLTQIIDNRTSDEILIQITAYLWFIWKAR 224


>ref|XP_002454960.1| hypothetical protein SORBIDRAFT_03g002140 [Sorghum bicolor]
           gi|241926935|gb|EES00080.1| hypothetical protein
           SORBIDRAFT_03g002140 [Sorghum bicolor]
          Length = 423

 Score = 57.0 bits (136), Expect = 2e-06
 Identities = 36/109 (33%), Positives = 53/109 (48%), Gaps = 3/109 (2%)
 Frame = +1

Query: 154 LSPKIHTFV*RIIHNGLGTLNKLGNFIDDVPVKCQLCGAEEETIDHLSTRCQFAKAVLFG 333
           +SP I TF+ R+I   + T  ++  F D     C LCG  E  + HL   C+FA+AV F 
Sbjct: 56  ISPVIKTFIWRLIRRAIATGERVSAFTDKTDKACALCGFTENDM-HLFFHCEFARAVWFS 114

Query: 334 SS---LDFRVPSDQNYFVKQCLLQWLEAKDDGYSFCLGACLLWSIWKAK 471
           +    L   +P + +  V+QCL Q +  +            LW IWKA+
Sbjct: 115 AKTPLLSSVLPQEHDR-VQQCLAQIISPQVSDEILTQITTYLWFIWKAR 162


Top