BLASTX nr result

ID: Papaver23_contig00035065 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035065
         (682 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

ref|XP_002308787.1| f-box family protein [Populus trichocarpa] g...   116   5e-24
ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06...   111   2e-22
ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus ...   108   8e-22
ref|XP_003610528.1| F-box family protein [Medicago truncatula] g...   107   2e-21
ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|35550...   107   2e-21

>ref|XP_002308787.1| f-box family protein [Populus trichocarpa]
           gi|222854763|gb|EEE92310.1| f-box family protein
           [Populus trichocarpa]
          Length = 396

 Score =  116 bits (290), Expect = 5e-24
 Identities = 66/199 (33%), Positives = 103/199 (51%), Gaps = 8/199 (4%)
 Frame = -1

Query: 574 QIIDVCNGLICYRTRNKDIIIWNPYTKVYKKLPNPP-ESTSSFPKYPMAMIQYGFGYDEK 398
           +++   NGL+C      DI +WNP T+ ++ +P  P E    F     ++  +GFGYD  
Sbjct: 97  KVLGSVNGLLCISNVVDDIAVWNPSTRKHRVVPFLPIELKRYFGTKSCSVYVFGFGYDSV 156

Query: 397 SKDYKFATSVSC-----QSKYSELGVYSFRTNSWRIMANIPFL--YPFGKIVFFNGIFHW 239
             DYK            +S  SE+ VYS R  SWR + ++P+   YP    VF NG  HW
Sbjct: 157 RDDYKLVRIAQFGGGGKRSFESEVKVYSLRKQSWRRIGDMPYCVHYPGANGVFANGALHW 216

Query: 238 IECPTLDTGLPRTIGSFDLESETFKEIQLPQKLLDRYKFTMLDLWLFEGCLYLIGSMYMI 59
           +     ++ +   + + DL  E ++E+  P+    + K   +DL +  GCL  + +    
Sbjct: 217 VVGENPESNVANIVVALDLGVEDYREVLQPEY---KDKNFYIDLGVLRGCLCFLANFLGE 273

Query: 58  GVEVWLMKEYGIKESWTKM 2
            V+VW+MKEYG+KESWTK+
Sbjct: 274 RVDVWMMKEYGVKESWTKL 292


>ref|XP_002268486.1| PREDICTED: F-box/kelch-repeat protein At3g06240-like [Vitis
           vinifera]
          Length = 360

 Score =  111 bits (277), Expect = 2e-22
 Identities = 77/235 (32%), Positives = 116/235 (49%), Gaps = 8/235 (3%)
 Frame = -1

Query: 682 IDCKDTSICYVDYDSASSTVSSQVIEIDYPVEYKK--FQIIDVCNGLICYRTRNKDIIIW 509
           I C    I  +D D AS   +S V+ IDYP+E     FQI+D C+GL+C      +  +W
Sbjct: 58  ISCPGRVIRSMDPD-ASGNDNSGVVNIDYPLEPSNLVFQILDSCDGLLCVIDSFHNPALW 116

Query: 508 NPYTKVYKKLPNPPESTSSFPKYPMAMIQYGFGYDEKSKDYKFATSVSCQSKY--SELGV 335
           NP T+ +  LP P    +S        I YGF YD  S DYK    VS       +E+ V
Sbjct: 117 NPSTRQFNPLPKPSFLENS-------DILYGFTYDYSSDDYKIVRVVSTSRDVIKTEIDV 169

Query: 334 YSFRTNSWRIMANIPFLYPFGKI-VFFNGIFHWIECPTLD--TGLPRTIGSFDLESETFK 164
           +  +TN WR +    +  P   +  F NG F+W+     +   G  R + SFDL+ E FK
Sbjct: 170 FELKTNEWRRVEETHYSRPAWDVGTFLNGAFYWLAWRLSEGHEGFSRVVVSFDLKEERFK 229

Query: 163 EIQLPQKLLDRYKFTMLDLWLFEGCL-YLIGSMYMIGVEVWLMKEYGIKESWTKM 2
           E++LP  +       +++L +F G L  +   +Y    ++W+M+E   K+SW  +
Sbjct: 230 EVELPSDV------GIINLRVFGGYLSAMYHDLYGELTKMWVMEEKAGKDSWANV 278


>ref|XP_002532719.1| ubiquitin-protein ligase, putative [Ricinus communis]
           gi|223527546|gb|EEF29668.1| ubiquitin-protein ligase,
           putative [Ricinus communis]
          Length = 389

 Score =  108 bits (271), Expect = 8e-22
 Identities = 66/199 (33%), Positives = 105/199 (52%), Gaps = 8/199 (4%)
 Frame = -1

Query: 574 QIIDVCNGLICYRTRNKDIIIWNPYTKVYKKLPN-PPESTSSFPKYPMAMIQYGFGYDEK 398
           +I+  CNGL+C      DI +WNP  + ++ +P  P E    F      +  +GFGYD  
Sbjct: 90  KILGSCNGLLCICNIVDDIALWNPSIRAHRVVPYLPVELKRYFGMCSCRVSVFGFGYDLS 149

Query: 397 SKDYKFAT-----SVSCQSKYSELGVYSFRTNSWRIMANIPF--LYPFGKIVFFNGIFHW 239
           + DYK         V  +S  SE+ V+S R NSWR +A++P+  LYP    ++ NG  HW
Sbjct: 150 NDDYKLVRIAQFGGVDRKSFESEVKVFSLRKNSWRRIADMPYCVLYPGENGIYANGALHW 209

Query: 238 IECPTLDTGLPRTIGSFDLESETFKEIQLPQKLLDRYKFTMLDLWLFEGCLYLIGSMYMI 59
           +     D+ +  TI + DL  E +  +  P+  +D      + + + +GCL L+      
Sbjct: 210 LVSQDPDSTVADTIVALDLGVEDYHVVPKPE-FVDMN--CNMGVGVLQGCLSLLAYARSE 266

Query: 58  GVEVWLMKEYGIKESWTKM 2
            V+VW+M+EY +KESW+K+
Sbjct: 267 RVDVWVMEEYMVKESWSKL 285


>ref|XP_003610528.1| F-box family protein [Medicago truncatula]
           gi|355511583|gb|AES92725.1| F-box family protein
           [Medicago truncatula]
          Length = 392

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/219 (29%), Positives = 113/219 (51%), Gaps = 14/219 (6%)
 Frame = -1

Query: 616 QVIEIDYPVEY--KKFQIIDVCNGLICYRTRNKDIIIWNPYTKVYKKLPNPP-----EST 458
           +V E+D+P+     + +++  CNGL+C      DI  WNP  + ++ +P+ P      + 
Sbjct: 71  RVKELDHPLMCYSNRIKVLGSCNGLLCICNIADDIAFWNPTIRKHRIIPSEPLIRKETNE 130

Query: 457 SSFPKYPMAMIQYGFGYDEKSKDYKFAT-----SVSCQSKYSELGVYSFRTNSWRIMANI 293
           ++     +A   YGFGYD  + DYK  +      +  +S  S + +Y+ RT+ W+ + ++
Sbjct: 131 NNTITTLLAAHVYGFGYDSATDDYKLVSISYFVDLHNRSFDSHVKIYTMRTDVWKTLPSM 190

Query: 292 PFLYPFGKI--VFFNGIFHWIECPTLDTGLPRTIGSFDLESETFKEIQLPQKLLDRYKFT 119
           P+     +   VF +G  HW+    L+      I +FDL  E F+E+ LP  +  ++   
Sbjct: 191 PYALCCARTMGVFVSGALHWVVTRDLEPESRDLIVAFDLRFEVFREVALPGTVDGKFD-- 248

Query: 118 MLDLWLFEGCLYLIGSMYMIGVEVWLMKEYGIKESWTKM 2
            +D+ L  G L +I +    G +VW+M+EYG  +SW KM
Sbjct: 249 -MDVALLRGMLCIIENRGSDGFDVWVMREYGSHDSWCKM 286


>ref|XP_003637498.1| F-box protein [Medicago truncatula] gi|355503433|gb|AES84636.1|
           F-box protein [Medicago truncatula]
          Length = 383

 Score =  107 bits (267), Expect = 2e-21
 Identities = 64/232 (27%), Positives = 112/232 (48%), Gaps = 14/232 (6%)
 Frame = -1

Query: 655 YVDYDSASSTVSSQVIEIDYPVEYKKFQIIDVCNGLICYRTRNKDIIIWNPYTKVYKKLP 476
           +   +  S+  +   + I +     +  ++  CNGL+C  + N  I  WNP  + ++ +P
Sbjct: 61  FYQIEDFSNLTTGVKLNIPFTGPINRMSLLGSCNGLLCISS-NAGIAFWNPNIRKHRIIP 119

Query: 475 NPPEST----SSFPKYPMAMIQYGFGYDEKSKDYKFATSVSC------QSKYSELGVYSF 326
            PP  T     S     +    +GFG+D  + DYK    +SC       +  S + ++SF
Sbjct: 120 FPPIPTPQHHESNNNIYVGFCIHGFGFDPLTNDYKLIR-ISCFVGVQHSTFESHVRLFSF 178

Query: 325 RTNSWRIMANIPFLYPFGKIV---FFNGIFHWIECPTLDTGLPRTIGSFDLESETFKEIQ 155
           +TNSW+ +  +P+   + +     F     HW+    LD   PR I +F+L  E F E+ 
Sbjct: 179 KTNSWKELPTMPYTLSYARRTMGDFVENSLHWVMTRKLDLLQPRAIVAFNLTLEIFNEVP 238

Query: 154 LPQKLLD-RYKFTMLDLWLFEGCLYLIGSMYMIGVEVWLMKEYGIKESWTKM 2
            P+   D   +   + + + EGCL +I +     ++VW+MKEYG ++SW K+
Sbjct: 239 FPEIGEDVNSESFQIGISVLEGCLCMIVNYQTAKIDVWVMKEYGCRDSWCKL 290


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