BLASTX nr result

ID: Papaver23_contig00035019 seq

BLASTX 2.2.25 [Feb-01-2011]


Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer, 
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997), 
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs",  Nucleic Acids Res. 25:3389-3402.

Query= Papaver23_contig00035019
         (493 letters)

Database: ./nr 
           23,641,837 sequences; 8,123,359,852 total letters

Searching..................................................done



                                                                 Score    E
Sequences producing significant alignments:                      (bits) Value

gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK4407...   185   3e-45
gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium prat...   182   2e-44
ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycin...   178   4e-43
ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloropla...   178   5e-43
gb|ABI14811.1| chloroplast photosystem II light-inducible protei...   178   5e-43

>gb|AFK39810.1| unknown [Lotus japonicus] gi|388512023|gb|AFK44073.1| unknown
           [Lotus japonicus]
          Length = 139

 Score =  185 bits (470), Expect = 3e-45
 Identities = 95/134 (70%), Positives = 109/134 (81%), Gaps = 7/134 (5%)
 Frame = +1

Query: 13  MMSSVTLKPS------SAVRGLPSLARTT-TFRVQASGVKKIKTDTPYGTGGGMDLRNGV 171
           +M+SV+LKP+      S+VRGLPSL+R++ +FRV ASG KKIKTDTPYGTGGGM+LRNGV
Sbjct: 5   VMASVSLKPAGFSLEKSSVRGLPSLSRSSASFRVVASGGKKIKTDTPYGTGGGMNLRNGV 64

Query: 172 DASGRKAKGKGVYQFTDKYGANVDGYSPIYDQKEWSQTGDRYAGGTTGLAIWAVTXXXXX 351
           DASGRK +GKGVYQ+ DKYGANVDGYSPIYD K+WS TGD YAGGTTGLAIWAVT     
Sbjct: 65  DASGRKPRGKGVYQYVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTLLGLL 124

Query: 352 XXXXXXVYNTSALA 393
                 VYNTSAL+
Sbjct: 125 AGGALLVYNTSALS 138


>gb|AAQ24852.1| 10 kDa photosystem II polypeptide [Trifolium pratense]
          Length = 136

 Score =  182 bits (462), Expect = 2e-44
 Identities = 94/133 (70%), Positives = 105/133 (78%), Gaps = 6/133 (4%)
 Frame = +1

Query: 13  MMSSVTLKPS------SAVRGLPSLARTTTFRVQASGVKKIKTDTPYGTGGGMDLRNGVD 174
           +M+SV+LKP+      S+VRGLP+L+R   FRV ASGVKKIKTDTPYGTGGGMDL NG+D
Sbjct: 5   VMASVSLKPTPFMVEKSSVRGLPNLSRP--FRVVASGVKKIKTDTPYGTGGGMDLPNGLD 62

Query: 175 ASGRKAKGKGVYQFTDKYGANVDGYSPIYDQKEWSQTGDRYAGGTTGLAIWAVTXXXXXX 354
           ASGRK KGKGVYQF DKYGANVDGYSPIY+ K+WS TGD Y GGTTGLAIWAVT      
Sbjct: 63  ASGRKQKGKGVYQFVDKYGANVDGYSPIYEPKDWSPTGDVYTGGTTGLAIWAVTLAGLLA 122

Query: 355 XXXXXVYNTSALA 393
                VYNTSAL+
Sbjct: 123 GGALLVYNTSALS 135


>ref|NP_001235442.1| uncharacterized protein LOC100499745 [Glycine max]
           gi|255626243|gb|ACU13466.1| unknown [Glycine max]
          Length = 139

 Score =  178 bits (452), Expect = 4e-43
 Identities = 94/134 (70%), Positives = 103/134 (76%), Gaps = 7/134 (5%)
 Frame = +1

Query: 13  MMSSVTLKPS------SAVRGLPSLAR-TTTFRVQASGVKKIKTDTPYGTGGGMDLRNGV 171
           +M+SV LKP+      S+VRGLPSL+R +++FRV ASG KKIKTD PYG  GGM LR GV
Sbjct: 5   VMASVALKPAPFTVEKSSVRGLPSLSRNSSSFRVVASGGKKIKTDKPYGINGGMALREGV 64

Query: 172 DASGRKAKGKGVYQFTDKYGANVDGYSPIYDQKEWSQTGDRYAGGTTGLAIWAVTXXXXX 351
           DASGRK KGKGVYQF DKYGANVDGYSPIYD K+WS TGD YAGGTTGLAIWAVT     
Sbjct: 65  DASGRKGKGKGVYQFVDKYGANVDGYSPIYDTKDWSPTGDVYAGGTTGLAIWAVTLLGLL 124

Query: 352 XXXXXXVYNTSALA 393
                 VYNTSALA
Sbjct: 125 AGGALLVYNTSALA 138


>ref|XP_002529952.1| Photosystem II 10 kDa polypeptide, chloroplast precursor, putative
           [Ricinus communis] gi|223530550|gb|EEF32429.1|
           Photosystem II 10 kDa polypeptide, chloroplast
           precursor, putative [Ricinus communis]
          Length = 138

 Score =  178 bits (451), Expect = 5e-43
 Identities = 92/134 (68%), Positives = 103/134 (76%), Gaps = 7/134 (5%)
 Frame = +1

Query: 13  MMSSVTLKPS-------SAVRGLPSLARTTTFRVQASGVKKIKTDTPYGTGGGMDLRNGV 171
           +M+SV+LKPS       S+VRGLP+L+R T FR++ASG KKIKTD PYG GGGM+LRNGV
Sbjct: 5   VMASVSLKPSPFTVQKSSSVRGLPTLSRRT-FRIEASGGKKIKTDKPYGIGGGMELRNGV 63

Query: 172 DASGRKAKGKGVYQFTDKYGANVDGYSPIYDQKEWSQTGDRYAGGTTGLAIWAVTXXXXX 351
           DASGRK  GKGVYQF DKYGANVDGYSPIY+  EWS TGD YAGG TGLAIWA+T     
Sbjct: 64  DASGRKPTGKGVYQFVDKYGANVDGYSPIYNTDEWSPTGDVYAGGATGLAIWAITLAGLL 123

Query: 352 XXXXXXVYNTSALA 393
                 VYNTSALA
Sbjct: 124 AGGALLVYNTSALA 137


>gb|ABI14811.1| chloroplast photosystem II light-inducible protein [Pachysandra
           terminalis]
          Length = 138

 Score =  178 bits (451), Expect = 5e-43
 Identities = 91/136 (66%), Positives = 106/136 (77%), Gaps = 6/136 (4%)
 Frame = +1

Query: 4   STVMMSSVTLKPS-----SAVRGLPSLAR-TTTFRVQASGVKKIKTDTPYGTGGGMDLRN 165
           +T +MSS++LK S     SA RGLPSLAR +++FRV+ASGVKKIKTD PYGTGGGM LR+
Sbjct: 2   ATSVMSSLSLKASPFLEKSAARGLPSLARPSSSFRVEASGVKKIKTDKPYGTGGGMSLRD 61

Query: 166 GVDASGRKAKGKGVYQFTDKYGANVDGYSPIYDQKEWSQTGDRYAGGTTGLAIWAVTXXX 345
           G+DASGRK KGKGVYQF DKYGANVDGYSPIYDQ +WS +G  Y GGTTGL +WA+T   
Sbjct: 62  GLDASGRKPKGKGVYQFVDKYGANVDGYSPIYDQXDWSPSGAVYVGGTTGLLVWAITLAA 121

Query: 346 XXXXXXXXVYNTSALA 393
                   VYNTSAL+
Sbjct: 122 LLLGGALLVYNTSALS 137


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